mRNA_P-littoralis_Contig1201.2.6 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1201.2.6
Unique NamemRNA_P-littoralis_Contig1201.2.6
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1201.2.6 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 483 bits (1244), Expect = 1.830e-166
Identity = 241/333 (72.37%), Postives = 273/333 (81.98%), Query Frame = 1
Query:    1 MAWATLMKLRETLVKRAREIYARRHPPALGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTLQQRDDKDARIATG--------------------------GKEEERFTLCLAVTADGKKVPVRIIFKGTPFIPTVT-GVGRATQPRKNSIAAEILPQNRRKVGHPMGGMSFGVQEKSWCDLRECKLWIKEGWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHPASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKICFKICGLSLALDGSE 918
            MAWATLMKLR+ L++RA EIYA+R+PPA GES + G+DL+S QLE V +E+F++LGNMDQTPVQ+EMP ETTL++   KDARIATG                          GKE+ERFTLCLAV+ADG KVP+RIIFKGTPF+P  T G G+ATQPRKNSIA E+LP NR K G P+GGMSFGVQEKSWCDLRE KLWIK+ W++RPNNGSV++QR CILVLDDFKCHKDD FIA LKR+ NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT H A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE VK CFKICGL+LALDGSE
Sbjct:  150 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSE 482          
BLAST of mRNA_P-littoralis_Contig1201.2.6 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 495 bits (1274), Expect = 5.260e-164
Identity = 238/302 (78.81%), Postives = 268/302 (88.74%), Query Frame = 1
Query:    1 MAWATLMKLRETLVKRAREIYARRHPPALGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTLQQRDDKDARIATGGKEEERFTLCLAVTADGKKVPVRIIFKGTPFIPTVT-GVGRATQPRKNSIAAEILPQNRRKVGHPMGGMSFGVQEKSWCDLRECKLWIKEGWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHPASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKICFKICGLSLA 903
            MAWATLMKLR+ L++RA EIYA+R+PPA GES + G+DL+S QLE V +E+FEELGNMDQTPVQHEMP ETTL+    KDARIATGGKE+ERFTLCLAV+ADGKKVP+RIIFKGTPF+P  T G G+ATQPRKNSIA E+LP NR K G P+GGMSFGVQEKSWCDLRECKLWIK+ W++RPNNGS+++QR CILVLDDFKCHKDD FIA LKR+ NTIVIFIPGGL PL QPLDRMLNKQMKRLLRGMYT H A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE+VK CFKICGL+LA
Sbjct:  217 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLA 518          
BLAST of mRNA_P-littoralis_Contig1201.2.6 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 471 bits (1213), Expect = 1.150e-161
Identity = 229/307 (74.59%), Postives = 260/307 (84.69%), Query Frame = 1
Query:    1 MAWATLMKLRETLVKRAREIYARRHPPALGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTLQQRDDKDARIATGGKEEERFTLCLAVTADGKKVPVRIIFKGTPFIPTVT-GVGRATQPRKNSIAAEILPQNRRKVGHPMGGMSFGVQEKSWCDLRECKLWIKEGWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHPASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKICFKICGLSLALDGSE 918
            MAWATLMKLR+ L++RA +IYA+R+PPA GE+ + G+DL+S QLE V +E+FEELGNMDQTPVQHE P E   +    +  R       EERFTLCLAV+ADGKKVP+RIIFKGTPF+P  T G G+ATQPRKNSIA E+LP NR K G P+GGMSFGVQEKSWCDLRECKLWIK+ W++RPNNGS+++QR CILVLDDFKCHKDD FIA LKR+ NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT H A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE  K CFKICGL+LALDGSE
Sbjct:  187 MAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVERLWK----RPVRRMPASPPEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSE 489          
BLAST of mRNA_P-littoralis_Contig1201.2.6 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 456 bits (1174), Expect = 2.250e-157
Identity = 228/307 (74.27%), Postives = 252/307 (82.08%), Query Frame = 1
Query:    1 MAWATLMKLRETLVKRAREIYARRHPPALGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTLQQRDDKDARIATGGKEEERFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKVGHPMGGMSFGVQEKSWCDLRECKLWIKEGWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHPASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKICFKICGLSLALDGSE 918
            MAWAT+MKLRE LVKRA EIYARRHPPA  ES + G+DLTSEQL SV  EVFEELGNMDQTPVQHE+P ETTL++   KDARI+TGGKE+ERFTL LAV ADGKKV  RIIFKGTPF P TV+G G++T PRKNS+A EI P NR K GHP  GMSFGVQEKSW D REC  WI   W++RPNNGS+++QR CILVLDDFKCHKD+ FIA LKRD NTIVIFIPG LTPLLQPLDRMLNKQMKRLLR  YT + ASA  D ++GKL PP RG VSTWCK+AW + TPE VK CF ICGL+LALDGSE
Sbjct:   63 MAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSE 369          
BLAST of mRNA_P-littoralis_Contig1201.2.6 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 445 bits (1144), Expect = 2.720e-153
Identity = 222/302 (73.51%), Postives = 249/302 (82.45%), Query Frame = 1
Query:   16 LMKLRETLVKRAREIYARRHPPALGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTLQQRDDKDARIATGGKEEERFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKVGHPMGGMSFGVQEKSWCDLRECKLWIKEGWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHPASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKICFKICGLSLALDGSE 918
            +MKLRE LVKRA EIYARRHPPA  ES + G+DLTSEQL SV  EVFE+LGNMDQTPVQHEMP ETTL++   KDAR++TGG+E+ERFTL LAVTADGKKV +RIIF GTPFIP TV+G G++T PRKNS+A E+ P NR K GHP  GMSFGVQEKSW D REC  W    W++RPNNGS+++QR CILVLDDFKCHKD+ FIA LKRD NTIVIFIPGGLTPLLQPLDRMLNKQ KRLLR  YT + ASA  D ++GKL PP RG VSTWCK AW +ITPE VK CFKICGL+LALDGSE
Sbjct:    2 VMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASAT-DARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSE 302          
BLAST of mRNA_P-littoralis_Contig1201.2.6 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 442 bits (1136), Expect = 2.590e-152
Identity = 227/336 (67.56%), Postives = 253/336 (75.30%), Query Frame = 1
Query:    1 MAWATLMKLRETLVKRAREIYARRHPPALGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTLQQRDDKDARIATGGKEEERFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKVGHPMGGMSFGVQEKSWCDLRECKLWIKEGWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHPASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMV-----------------------------KICFKICGLSLALDGSE 918
            MAWAT+MKLRE LV+RA EIYARRHPPA  ES + G+DLT EQL SV  EVF+ELGNMDQTPVQHEMP ETTL++   KDARI+TGGKE+ERFTL LAV ADGKKV  RIIFKGTPFIP  V+G G++T PRKNS+A EI P NR K  HP  GMSFGVQEKSW D REC  WI   W++RPNNGS+++QR CILVLDDFKCHKD+ +IA LKRD NTIVI IPGGLTPLLQPLDRMLNKQMKRLLRG YT + ASA  D ++GKL PP RG VSTWCK+AW +ITPE V                             K CFKICGL+LALDGSE
Sbjct:   63 MAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSE 398          
BLAST of mRNA_P-littoralis_Contig1201.2.6 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 440 bits (1132), Expect = 2.440e-149
Identity = 220/307 (71.66%), Postives = 247/307 (80.46%), Query Frame = 1
Query:    1 MAWATLMKLRETLVKRAREIYARRHPPALGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTLQQRDDKDARIATGGKEEERFTLCLAVTADGKKVPVRIIFKGTPFIPTVT-GVGRATQPRKNSIAAEILPQNRRKVGHPMGGMSFGVQEKSWCDLRECKLWIKEGWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHPASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKICFKICGLSLALDGSE 918
            MAWATLMKLR+ L++RA EIYA+R+PPA GES + G+DL+S QLE V +E+FEELGNMDQTPVQHE  A                GGKE+ERFTLCLAV+ADGKKVP+RIIFKGTPF+P  T G G+ATQPRKNSIA E+LP NR K G P+ GMSFGVQEKSWCDLRECKLWIK  W++RPNNGS+++QR CILVLDDFKCHKDD FIA LKR+ NTIVIFIPGGLTPLLQ LDRMLNKQMKRLL              PKTGKL PPGRGAV+TWCK+AWA+ITPE VK CFKICGL+LALDGSE
Sbjct:  204 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHERDA----------------GGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSE 494          
BLAST of mRNA_P-littoralis_Contig1201.2.6 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 442 bits (1137), Expect = 7.610e-149
Identity = 223/308 (72.40%), Postives = 249/308 (80.84%), Query Frame = 1
Query:    1 MAWATLMKLRETLVKRAREIYARRHPPALGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTLQQRDDKDARIATGG-KEEERFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKVGHPMGGMSFGVQEKSWCDLRECKLWIKEGWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHPASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKICFKICGLSLALDGSE 918
            MAWAT+MKL E LVKRA EIYARRHPPA  ES + G+DL SEQL SV  EVFEE+GNMDQ PVQHEMP ETTL +   KDARI+TGG  E+ERFTL LAVTADGKKV  RIIF+GTPFIP TV+G G++T+PRKN +A E+ P NR K GHP  GMSFGVQEKSW D REC  WI   W++RPNNGS+++QR  ILVLDDFKCH D+ FIA LKRD NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRG YT +  SA  D ++GKL PP RG VSTWCK+AW +ITPE VK C KICGL+LALDGSE
Sbjct:  257 MAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSE 564          
BLAST of mRNA_P-littoralis_Contig1201.2.6 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 6.470e-148
Identity = 222/315 (70.48%), Postives = 246/315 (78.10%), Query Frame = 1
Query:    1 MAWATLMKLRETLVKRAREIYARRHPPALGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTLQQRDDKDARIATGGKEEERFTLCLAVTADGKKVPVRIIFKGTPFIP-TVTGVGRATQPRKNSIAAEILPQNRRKVGHPMGGMSFGVQEKSWCDLRECKLWIKEGWRV--------RPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHPASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKICFKICGLSLALDGSE 918
            MAWAT+ KLRE LVKRA EIYARRHPPA  ES + G+DLTSEQ  SV  EVFEELGNMDQTPVQHEMP ETTL+    KDARI+TGGKE+ERFTL LAV ADGK V   IIFKGTPFIP TV+G G++T PRKNS+A E+ P NR K GHP  GMSFGVQEKSW   +EC  WI   W++        RPNNGS+++QR CILVLDDFKCHKD+ FIA L RD NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRG YT + A A  D ++GKL PP RG VSTWCK+AW  +T E V  CFKICGL+LALDGSE
Sbjct:  217 MAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSE 531          
BLAST of mRNA_P-littoralis_Contig1201.2.6 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 1.740e-140
Identity = 201/253 (79.45%), Postives = 220/253 (86.96%), Query Frame = 1
Query:    1 MAWATLMKLRETLVKRAREIYARRHPPALGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTLQQRDDKDARIATGGKEEERFTLCLAVTADGKKVPVRIIFKGTPFIPTVT-GVGRATQPRKNSIAAEILPQNRRKVGHPMGGMSFGVQEKSWCDLRECKLWIKEGWRVRPNNGSVLKQRACILVLDDFKCHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKH 756
            MAWATLMKLRE LV+RA EIYARR+PPA GES + G+DLTSEQLESV  EVF ELGNMDQTPVQHEMP ET+L++   KDARIATGGKE+ERFTLCLAVT D KKVP+R IFKGTP IP    G G+ATQPRKNSIA E+LP+NR K G+P+GGMSFGVQEKSWCDLRECKLWIK  W +RPNNGS++KQR CILVLDDFKCHKDD FIA LKR  NTIVIFIPGGLTPLLQPLDRMLNK+MKRLLRGMYT +
Sbjct:    1 MAWATLMKLREALVERADEIYARRNPPAPGESPIKGEDLTSEQLESVTAEVFVELGNMDQTPVQHEMPVETSLEKTGAKDARIATGGKEKERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDRPGKGKATQPRKNSIAWEMLPENRSKNGYPVGGMSFGVQEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFKCHKDDTFIAELKRQANTIVIFIPGGLTPLLQPLDRMLNKRMKRLLRGMYTNY 253          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1201.2.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE45_9PHAE1.830e-16672.37DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE5.260e-16478.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRZ1_9PHAE1.150e-16174.59DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE2.250e-15774.27DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE2.720e-15373.51DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE2.590e-15267.56DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE2.440e-14971.66DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE7.610e-14972.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE6.470e-14870.48DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FXD3_ECTSI1.740e-14079.45DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1201contigP-littoralis_Contig1201:21637..22897 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size918
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.85e-141
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size918
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789516.2214592-CDS-P-littoralis_Contig1201:21636..218951680789516.2214592-CDS-P-littoralis_Contig1201:21636..21895Pylaiella littoralis U1_48CDSP-littoralis_Contig1201 21637..21895 +
1680789516.2320182-CDS-P-littoralis_Contig1201:22238..228971680789516.2320182-CDS-P-littoralis_Contig1201:22238..22897Pylaiella littoralis U1_48CDSP-littoralis_Contig1201 22239..22897 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1201.2.6prot_P-littoralis_Contig1201.2.6Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1201 21637..22897 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1201.2.6

>prot_P-littoralis_Contig1201.2.6 ID=prot_P-littoralis_Contig1201.2.6|Name=mRNA_P-littoralis_Contig1201.2.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=306bp
MAWATLMKLRETLVKRAREIYARRHPPALGESSVDGKDLTSEQLESVAEE
VFEELGNMDQTPVQHEMPAETTLQQRDDKDARIATGGKEEERFTLCLAVT
ADGKKVPVRIIFKGTPFIPTVTGVGRATQPRKNSIAAEILPQNRRKVGHP
MGGMSFGVQEKSWCDLRECKLWIKEGWRVRPNNGSVLKQRACILVLDDFK
CHKDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT
KHPASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKICFKICGLSL
ALDGSE
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mRNA from alignment at P-littoralis_Contig1201:21637..22897+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1201.2.6 ID=mRNA_P-littoralis_Contig1201.2.6|Name=mRNA_P-littoralis_Contig1201.2.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=1261bp|location=Sequence derived from alignment at P-littoralis_Contig1201:21637..22897+ (Pylaiella littoralis U1_48)
ATGGCGTGGGCGACGCTGATGAAGCTGCGCGAGACTCTCGTGAAGCGCGC TAGGGAGATCTACGCTCGGCGCCACCCCCCTGCACTTGGTGAGAGCTCCG TCGACGGGAAGGACCTGACTTCCGAGCAGCTGGAGTCGGTCGCCGAAGAG GTGTTCGAAGAACTCGGCAACATGGACCAGACGCCAGTCCAGCACGAGAT GCCGGCGGAGACGACGCTGCAGCAGCGCGATGATAAGGACGCTCGCATTG CCACTGGAGGTGAGAGTGAACTGCGGTGCTGCCAGTTGTGTACGAGGAGT ACCTACATGTTTCCCTGTTCCTATCAAGTATTGGCGTCTTCGTTGTTGCA GGTTTCTTTTTGGTCTTGGTGTTTTGTACTCCGTATTTTTTAGTTCTGGG AAATCCGTACGTCTACAATTTGCAGCCATGTCAACACCTCTTTCCGATGC AGTTTTTGATCGTGGTGCTTTTTCCTCTCTACTGGAAATCCGTGCGTGTA CCGTCTGCAGCCATCCATGTCAAGCGCCATCTGCTAGTCAGCATTGTTCA AACCCCTCCTCCTACTCGCCTACCCCCTACCGTCGTGTGCACCCCTCCCC AGGAAAGGAGGAGGAACGCTTCACGCTTTGCCTTGCTGTCACGGCGGACG GGAAGAAGGTTCCGGTGCGCATCATCTTTAAGGGAACGCCGTTCATCCCG ACGGTCACCGGTGTGGGCAGGGCAACTCAGCCGCGGAAGAATTCCATCGC GGCTGAGATCCTTCCCCAGAACCGTCGCAAGGTCGGGCACCCCATGGGAG GCATGTCTTTCGGCGTGCAGGAGAAAAGCTGGTGCGACCTGCGGGAGTGC AAGCTCTGGATCAAGGAGGGCTGGAGGGTCCGCCCGAACAACGGCAGCGT CCTCAAGCAGCGGGCATGCATCTTGGTGCTGGACGACTTCAAGTGCCACA AGGACGACGAGTTCATCGCCTTCCTCAAGAGGGACACCAACACCATCGTC ATCTTCATCCCAGGCGGATTGACTCCTCTCCTCCAACCGCTGGATCGCAT GCTCAACAAGCAGATGAAGCGACTGCTGCGGGGCATGTACACGAAGCACC CGGCGTCGGCGGCCAGAGACCCCAAGACGGGCAAGCTGACACCGCCTGGG CGTGGTGCCGTCTCGACGTGGTGCAAGGACGCGTGGGCAACCATCACGCC GGAGATGGTCAAGATTTGTTTTAAGATCTGCGGCCTCTCGCTTGCGCTCG ACGGCAGCGAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1201:21637..22897+

>mRNA_P-littoralis_Contig1201.2.6 ID=mRNA_P-littoralis_Contig1201.2.6|Name=mRNA_P-littoralis_Contig1201.2.6|organism=Pylaiella littoralis U1_48|type=CDS|length=918bp|location=Sequence derived from alignment at P-littoralis_Contig1201:21637..22897+ (Pylaiella littoralis U1_48)
ATGGCGTGGGCGACGCTGATGAAGCTGCGCGAGACTCTCGTGAAGCGCGC
TAGGGAGATCTACGCTCGGCGCCACCCCCCTGCACTTGGTGAGAGCTCCG
TCGACGGGAAGGACCTGACTTCCGAGCAGCTGGAGTCGGTCGCCGAAGAG
GTGTTCGAAGAACTCGGCAACATGGACCAGACGCCAGTCCAGCACGAGAT
GCCGGCGGAGACGACGCTGCAGCAGCGCGATGATAAGGACGCTCGCATTG
CCACTGGAGGAAAGGAGGAGGAACGCTTCACGCTTTGCCTTGCTGTCACG
GCGGACGGGAAGAAGGTTCCGGTGCGCATCATCTTTAAGGGAACGCCGTT
CATCCCGACGGTCACCGGTGTGGGCAGGGCAACTCAGCCGCGGAAGAATT
CCATCGCGGCTGAGATCCTTCCCCAGAACCGTCGCAAGGTCGGGCACCCC
ATGGGAGGCATGTCTTTCGGCGTGCAGGAGAAAAGCTGGTGCGACCTGCG
GGAGTGCAAGCTCTGGATCAAGGAGGGCTGGAGGGTCCGCCCGAACAACG
GCAGCGTCCTCAAGCAGCGGGCATGCATCTTGGTGCTGGACGACTTCAAG
TGCCACAAGGACGACGAGTTCATCGCCTTCCTCAAGAGGGACACCAACAC
CATCGTCATCTTCATCCCAGGCGGATTGACTCCTCTCCTCCAACCGCTGG
ATCGCATGCTCAACAAGCAGATGAAGCGACTGCTGCGGGGCATGTACACG
AAGCACCCGGCGTCGGCGGCCAGAGACCCCAAGACGGGCAAGCTGACACC
GCCTGGGCGTGGTGCCGTCTCGACGTGGTGCAAGGACGCGTGGGCAACCA
TCACGCCGGAGATGGTCAAGATTTGTTTTAAGATCTGCGGCCTCTCGCTT
GCGCTCGACGGCAGCGAA
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