prot_P-littoralis_Contig870.1.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig870.1.2
Unique Nameprot_P-littoralis_Contig870.1.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length906
Homology
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: D7FN63_ECTSI (Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (Mouse), isoform CRA_c n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN63_ECTSI)

HSP 1 Score: 849 bits (2193), Expect = 9.900e-296
Identity = 482/909 (53.03%), Postives = 625/909 (68.76%), Query Frame = 0
Query:   29 QEAQVDAFTAAEHERVSPLNGCMWRGRKGSGVVNCVEGLGMLQHLRDSRLIPYRFGCNCLYKHPGLKHLLDGRHSRQEMGYSPGAFPQLMHINPSMSEPVLLRRNKDGLAPGAIAFAGAEFVVLGKTVVGVEEVWEVVFELFEIVPGG-DESEDDAPTPS---LEGLPESQAKHGTGKSTLFVPSTLQGKPTLVEGQAPTDIDRLKAWHMNPEYHAISHHVWCMEDFRIFLFFHRLLVTLCAVCFSVTRLSGLVRIAI-CGFILWQTTRISKWDDLVYKYYRSGAGKSMMVVVWMLVWLWVRVRHVMKLASMLARELLTGAMALPDFLLPRKLALLIYAVAGFLALLVRFVLGLIIFVYDTSIDAMVTRLPQIPGLVGTVNFVDYAIGFVFAVAMTLLGVLVTLLRWWYCPPEESLLVQTEKRFRDLLGRTDANSKTQFAELLCKLVFDLRSKKDLAIDRRRRAKGHGANDCSGERRAGAHACLAALAVAAVKLKRRASSREEAAITRILVKSGTIRDSLVRTARVMLATNPARAVSEVAHELMHAAHAGLIWPDEPLIKLALQSEGKDPTTENVSWHRAKWVAVAAKMVVDRESQPSEQHT-WFKLHDSGECEEMN-YRDCNIHPAERCVACYTQDYTQDGGRRSSAGSTH--MTIEGRKPSSRLSACKSAVVVDSRRRKIRPHYEVEADDCRVVRASSRVATGETEEFPFFHKKARQPKEVESERSRRLAARLKNLDDKFREFVRLDKDMEKANASQGRQKS------TNA----QNEKAAXXXXXXXXXXXXXVXXXRDRAIEAEALRQRRLQDLKVVVAAD-LDATDGSSDDDEGDEI------------LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENFTS 905
            QEAQVDAFT+ EHE +SP++G MWRGRKGSGV   V+GLGMLQHLRDSRLIPYR GCNCLY HP LKHLL GR    E G SP AFP+LMHINPSM+ PV+LRR + G+ PGA+AFAGAEFVV+GKTVVGVEEVWEVV EL E       E  D++P PS   LEG+PE   KHGT +STLFVP+T +G  TL+EGQAP DIDR KAWHM+PE+H ISHHVWC+ED RIFLF HRLL     V F+V +LSGL+RI + CG+++    R+   +D +Y+YYRS  G++++ V+ +L+ +   VR V+K+ASMLAREL+T  M LP  +L  K  +++ A+   +  +   V G++  +Y   +D  +  LP++P L  +V F D A+G++  + + L    V+L+ WWY PP+E+  VQTEKR+R+LL +TD  SK + A+L+ +L+ +LR + ++A++RRR  K  GA DC G RR  AHAC  ALAVAAVKLKR+ASS+E A I  IL KSG IRDSLVRTAR +LAT+P +AV+EV+HEL HAA+ GLIWPDEPLI  ALQSEG+DPT EN++WHRAKWVAVAA+++VD+E      HT WFK+      E  + +R+  +HPAERCV CYT     +    ++AG+ H  M  EGRKPS+R SAC+SAVV  S+R K+ P +E+  + C V+ A S   TG   E+P+FH +AR+P   +SERSRRLA R+++LD+KF   V LDK+M +A A+  R  S       NA    +++K               VXXX          R +RL++L+ ++AA+  +  DGS++ D                 LCIVCM EK+NACLVHGKT+H V CLPC  RLKKANMGCPICKRRID+VIE+FTS
Sbjct:    2 QEAQVDAFTSGEHE-MSPISGWMWRGRKGSGVAKGVKGLGMLQHLRDSRLIPYRLGCNCLYDHPALKHLLSGR----ENGSSPDAFPRLMHINPSMAGPVILRRREKGVVPGAVAFAGAEFVVVGKTVVGVEEVWEVVSELSEFFASQFSEDFDESPPPSPPGLEGVPEFHTKHGTARSTLFVPATSEGMLTLLEGQAPGDIDRFKAWHMDPEFHTISHHVWCLEDLRIFLFLHRLLFVFWVVPFTVQQLSGLLRIIVLCGYLVMLACRLPAHEDWLYEYYRSRVGQAVVAVMRVLLVVCCVVRKVLKVASMLARELVTQMMTLPGLILGEKGVVIMMAIVLVVMEVTHLVAGIVYTLYRAGVDLTIACLPRVPWLASSVRFADAALGYLLNLVVVLFLGSVSLVLWWYSPPKEAPSVQTEKRYRELLEKTDPESKEELAKLVKELISNLRHQNEMAMERRRNIKTKGARDCFGGRRVCAHACSGALAVAAVKLKRKASSQEMAHIKLILAKSGVIRDSLVRTARFLLATDPTKAVAEVSHELFHAAYDGLIWPDEPLIGKALQSEGRDPTAENINWHRAKWVAVAAELIVDQE------HTSWFKVPPGSTKEGGDTFRNSGVHPAERCVHCYTPQEGSNSSAAAAAGTRHRCMKTEGRKPSARFSACRSAVVKQSKRHKVLPRFELAEEKCCVIPADSESFTGMAAEYPYFHVEARRPGVDDSERSRRLAVRVRSLDEKFDWLVSLDKEMAEAKAAARRPASGPQDGEPNAKDQEEDDKTTRERKAAQERKARRVXXXXXXXXXXXXXRLQRLKELEELIAAEEKEDGDGSAEGDSXXXXXXXXXXXXXXASLCIVCMAEKRNACLVHGKTAHLVVCLPCGKRLKKANMGCPICKRRIDVVIESFTS 899          
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: A0A0B6XV46_9EUPU (RING-type domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6XV46_9EUPU)

HSP 1 Score: 71.2 bits (173), Expect = 6.720e-11
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:  852 CIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 903
            C+VC+T +K A ++HGKT HQV C  CA RLK+    CPIC+R I  VI NF
Sbjct:   85 CVVCLTRRKTASIIHGKTGHQVCCYRCARRLKEQRKSCPICRRPIQKVIRNF 136          
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: UPI001CF2EB3D (protein Mdm4-like isoform X2 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF2EB3D)

HSP 1 Score: 75.9 bits (185), Expect = 9.760e-11
Identity = 28/53 (52.83%), Postives = 42/53 (79.25%), Query Frame = 0
Query:  851 LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 903
            LC++C+T+ +NA LVHG+T HQV C+ CA RLK+    CP+C+++I LV++NF
Sbjct:  342 LCVICLTQPRNASLVHGRTGHQVCCIECAERLKENKKRCPVCRKKIKLVVKNF 394          
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: UPI0009E593B8 (E3 ubiquitin-protein ligase Mdm2-like isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E593B8)

HSP 1 Score: 75.5 bits (184), Expect = 1.020e-10
Identity = 27/53 (50.94%), Postives = 42/53 (79.25%), Query Frame = 0
Query:  851 LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 903
            LC++C+T+ +NA +VHG+T HQV C+ CA RLK+    CP+C+++I LV++NF
Sbjct:  310 LCVICLTQPRNASIVHGRTGHQVCCIGCAERLKEGKKKCPVCRKKIKLVVKNF 362          
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: UPI0010FCC66B (protein Mdm4-like isoform X1 n=3 Tax=Acropora millepora TaxID=45264 RepID=UPI0010FCC66B)

HSP 1 Score: 75.9 bits (185), Expect = 1.120e-10
Identity = 28/53 (52.83%), Postives = 42/53 (79.25%), Query Frame = 0
Query:  851 LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 903
            LC++C+T+ +NA LVHG+T HQV C+ CA RLK+    CP+C+++I LV++NF
Sbjct:  363 LCVICLTQPRNASLVHGRTGHQVCCIECAERLKENKKRCPVCRKKIKLVVKNF 415          
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: A0A7R9Z1H2_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z1H2_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.990e-10
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 0
Query:  845 DEGDEILCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 903
            DE  + LC+VC++E++NA +VHG+T H   CL CA  LK   M CP+C+ +ID VI++F
Sbjct:   61 DEQQQKLCLVCLSEERNATIVHGETGHIACCLTCARILKFRKMKCPVCRLKIDTVIQHF 119          
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: A0A3M6UVS1_POCDA (Uncharacterized protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UVS1_POCDA)

HSP 1 Score: 72.8 bits (177), Expect = 9.130e-10
Identity = 27/53 (50.94%), Postives = 41/53 (77.36%), Query Frame = 0
Query:  851 LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 903
            LCI+C+T+ +NA +VHG+T H V C+ CA RLK+    CP+C+++I LV++NF
Sbjct:  334 LCIICLTQPRNASIVHGRTGHLVCCIGCAERLKEEKKKCPVCRKKIKLVVKNF 386          
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: A0A2B4RC15_STYPI (Protein Mdm4 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RC15_STYPI)

HSP 1 Score: 70.5 bits (171), Expect = 4.380e-9
Identity = 26/53 (49.06%), Postives = 40/53 (75.47%), Query Frame = 0
Query:  851 LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 903
            LCI+C+ + +NA +VHG+T H V C+ CA RLK+    CP+C+++I LV++NF
Sbjct:  312 LCIICLMQPRNASIVHGRTGHLVCCIGCAERLKEEKKKCPVCRKKIKLVVKNF 364          
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: A0A833YJ51_9CHIR (MDM4 regulator of p53 n=1 Tax=Phyllostomus discolor TaxID=89673 RepID=A0A833YJ51_9CHIR)

HSP 1 Score: 68.6 bits (166), Expect = 8.110e-9
Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  852 CIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 903
            C VC    ++  ++HGKTSH VTC PCA RLKKA   CPICK+ I LVI  F
Sbjct:  225 CSVCEKRPRDGNIIHGKTSHLVTCFPCARRLKKAGASCPICKKAIHLVIRVF 276          
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: A0A3Q3VYW2_MOLML (RING-type domain-containing protein n=1 Tax=Mola mola TaxID=94237 RepID=A0A3Q3VYW2_MOLML)

HSP 1 Score: 63.5 bits (153), Expect = 1.020e-8
Identity = 24/54 (44.44%), Postives = 36/54 (66.67%), Query Frame = 0
Query:  852 CIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENFTS 905
            C++C ++ KN C+VHG+T H ++C  CA +LKK N  CP+C+  I  VI  + S
Sbjct:   40 CLICQSQPKNGCIVHGRTGHLISCYICARKLKKRNKLCPVCRLPIQSVIFTYLS 93          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN63_ECTSI9.900e-29653.03Mdm2, transformed 3T3 cell double minute 2, p53 bi... [more]
A0A0B6XV46_9EUPU6.720e-1155.77RING-type domain-containing protein (Fragment) n=1... [more]
UPI001CF2EB3D9.760e-1152.83protein Mdm4-like isoform X2 n=1 Tax=Acropora mill... [more]
UPI0009E593B81.020e-1050.94E3 ubiquitin-protein ligase Mdm2-like isoform X1 n... [more]
UPI0010FCC66B1.120e-1052.83protein Mdm4-like isoform X1 n=3 Tax=Acropora mill... [more]
A0A7R9Z1H2_9STRA1.990e-1049.15Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]
A0A3M6UVS1_POCDA9.130e-1050.94Uncharacterized protein n=2 Tax=Pocillopora damico... [more]
A0A2B4RC15_STYPI4.380e-949.06Protein Mdm4 n=2 Tax=Stylophora pistillata TaxID=5... [more]
A0A833YJ51_9CHIR8.110e-957.69MDM4 regulator of p53 n=1 Tax=Phyllostomus discolo... [more]
A0A3Q3VYW2_MOLML1.020e-844.44RING-type domain-containing protein n=1 Tax=Mola m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 781..816
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 850..898
e-value: 1.5E-9
score: 37.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 777..792
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 772..801
NoneNo IPR availableCDDcd16646mRING-HC-C2H2C4_MDM2_likecoord: 852..895
e-value: 1.05676E-15
score: 69.672
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 843..905
e-value: 7.2E-20
score: 72.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 852..893
score: 8.505968

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig870contigP-littoralis_Contig870:8559..16683 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig870.1.2mRNA_P-littoralis_Contig870.1.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig870 8559..16683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig870.1.2 ID=prot_P-littoralis_Contig870.1.2|Name=mRNA_P-littoralis_Contig870.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=906bp
QAWDHCDFVRSLDQVMLFPPSFQPLVIFQEAQVDAFTAAEHERVSPLNGC
MWRGRKGSGVVNCVEGLGMLQHLRDSRLIPYRFGCNCLYKHPGLKHLLDG
RHSRQEMGYSPGAFPQLMHINPSMSEPVLLRRNKDGLAPGAIAFAGAEFV
VLGKTVVGVEEVWEVVFELFEIVPGGDESEDDAPTPSLEGLPESQAKHGT
GKSTLFVPSTLQGKPTLVEGQAPTDIDRLKAWHMNPEYHAISHHVWCMED
FRIFLFFHRLLVTLCAVCFSVTRLSGLVRIAICGFILWQTTRISKWDDLV
YKYYRSGAGKSMMVVVWMLVWLWVRVRHVMKLASMLARELLTGAMALPDF
LLPRKLALLIYAVAGFLALLVRFVLGLIIFVYDTSIDAMVTRLPQIPGLV
GTVNFVDYAIGFVFAVAMTLLGVLVTLLRWWYCPPEESLLVQTEKRFRDL
LGRTDANSKTQFAELLCKLVFDLRSKKDLAIDRRRRAKGHGANDCSGERR
AGAHACLAALAVAAVKLKRRASSREEAAITRILVKSGTIRDSLVRTARVM
LATNPARAVSEVAHELMHAAHAGLIWPDEPLIKLALQSEGKDPTTENVSW
HRAKWVAVAAKMVVDRESQPSEQHTWFKLHDSGECEEMNYRDCNIHPAER
CVACYTQDYTQDGGRRSSAGSTHMTIEGRKPSSRLSACKSAVVVDSRRRK
IRPHYEVEADDCRVVRASSRVATGETEEFPFFHKKARQPKEVESERSRRL
AARLKNLDDKFREFVRLDKDMEKANASQGRQKSTNAQNEKAAQERAAAQE
RRARRVKARRDRAIEAEALRQRRLQDLKVVVAADLDATDGSSDDDEGDEI
LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVI
ENFTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING