mRNA_P-littoralis_Contig870.1.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig870.1.2
Unique NamemRNA_P-littoralis_Contig870.1.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: D7FN63_ECTSI (Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (Mouse), isoform CRA_c n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN63_ECTSI)

HSP 1 Score: 849 bits (2193), Expect = 9.900e-296
Identity = 482/909 (53.03%), Postives = 625/909 (68.76%), Query Frame = 1 
Query:   85 QEAQVDAFTAAEHERVSPLNGCMWRGRKGSGVVNCVEGLGMLQHLRDSRLIPYRFGCNCLYKHPGLKHLLDGRHSRQEMGYSPGAFPQLMHINPSMSEPVLLRRNKDGLAPGAIAFAGAEFVVLGKTVVGVEEVWEVVFELFEIVPGG-DESEDDAPTPS---LEGLPESQAKHGTGKSTLFVPSTLQGKPTLVEGQAPTDIDRLKAWHMNPEYHAISHHVWCMEDFRIFLFFHRLLVTLCAVCFSVTRLSGLVRIAI-CGFILWQTTRISKWDDLVYKYYRSGAGKSMMVVVWMLVWLWVRVRHVMKLASMLARELLTGAMALPDFLLPRKLALLIYAVAGFLALLVRFVLGLIIFVYDTSIDAMVTRLPQIPGLVGTVNFVDYAIGFVFAVAMTLLGVLVTLLRWWYCPPEESLLVQTEKRFRDLLGRTDANSKTQFAELLCKLVFDLRSKKDLAIDRRRRAKGHGANDCSGERRAGAHACLAALAVAAVKLKRRASSREEAAITRILVKSGTIRDSLVRTARVMLATNPARAVSEVAHELMHAAHAGLIWPDEPLIKLALQSEGKDPTTENVSWHRAKWVAVAAKMVVDRESQPSEQHT-WFKLHDSGECEEMN-YRDCNIHPAERCVACYTQDYTQDGGRRSSAGSTH--MTIEGRKPSSRLSACKSAVVVDSRRRKIRPHYEVEADDCRVVRASSRVATGETEEFPFFHKKARQPKEVESERSRRLAARLKNLDDKFREFVRLDKDMEKANASQGRQKS------TNA----QNEKAAXXXXXXXXXXXXXVXXXRDRAIEAEALRQRRLQDLKVVVAAD-LDATDGSSDDDEGDEI------------LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENFTS 2715
            QEAQVDAFT+ EHE +SP++G MWRGRKGSGV   V+GLGMLQHLRDSRLIPYR GCNCLY HP LKHLL GR    E G SP AFP+LMHINPSM+ PV+LRR + G+ PGA+AFAGAEFVV+GKTVVGVEEVWEVV EL E       E  D++P PS   LEG+PE   KHGT +STLFVP+T +G  TL+EGQAP DIDR KAWHM+PE+H ISHHVWC+ED RIFLF HRLL     V F+V +LSGL+RI + CG+++    R+   +D +Y+YYRS  G++++ V+ +L+ +   VR V+K+ASMLAREL+T  M LP  +L  K  +++ A+   +  +   V G++  +Y   +D  +  LP++P L  +V F D A+G++  + + L    V+L+ WWY PP+E+  VQTEKR+R+LL +TD  SK + A+L+ +L+ +LR + ++A++RRR  K  GA DC G RR  AHAC  ALAVAAVKLKR+ASS+E A I  IL KSG IRDSLVRTAR +LAT+P +AV+EV+HEL HAA+ GLIWPDEPLI  ALQSEG+DPT EN++WHRAKWVAVAA+++VD+E      HT WFK+      E  + +R+  +HPAERCV CYT     +    ++AG+ H  M  EGRKPS+R SAC+SAVV  S+R K+ P +E+  + C V+ A S   TG   E+P+FH +AR+P   +SERSRRLA R+++LD+KF   V LDK+M +A A+  R  S       NA    +++K               VXXX          R +RL++L+ ++AA+  +  DGS++ D                 LCIVCM EK+NACLVHGKT+H V CLPC  RLKKANMGCPICKRRID+VIE+FTS
Sbjct:    2 QEAQVDAFTSGEHE-MSPISGWMWRGRKGSGVAKGVKGLGMLQHLRDSRLIPYRLGCNCLYDHPALKHLLSGR----ENGSSPDAFPRLMHINPSMAGPVILRRREKGVVPGAVAFAGAEFVVVGKTVVGVEEVWEVVSELSEFFASQFSEDFDESPPPSPPGLEGVPEFHTKHGTARSTLFVPATSEGMLTLLEGQAPGDIDRFKAWHMDPEFHTISHHVWCLEDLRIFLFLHRLLFVFWVVPFTVQQLSGLLRIIVLCGYLVMLACRLPAHEDWLYEYYRSRVGQAVVAVMRVLLVVCCVVRKVLKVASMLARELVTQMMTLPGLILGEKGVVIMMAIVLVVMEVTHLVAGIVYTLYRAGVDLTIACLPRVPWLASSVRFADAALGYLLNLVVVLFLGSVSLVLWWYSPPKEAPSVQTEKRYRELLEKTDPESKEELAKLVKELISNLRHQNEMAMERRRNIKTKGARDCFGGRRVCAHACSGALAVAAVKLKRKASSQEMAHIKLILAKSGVIRDSLVRTARFLLATDPTKAVAEVSHELFHAAYDGLIWPDEPLIGKALQSEGRDPTAENINWHRAKWVAVAAELIVDQE------HTSWFKVPPGSTKEGGDTFRNSGVHPAERCVHCYTPQEGSNSSAAAAAGTRHRCMKTEGRKPSARFSACRSAVVKQSKRHKVLPRFELAEEKCCVIPADSESFTGMAAEYPYFHVEARRPGVDDSERSRRLAVRVRSLDEKFDWLVSLDKEMAEAKAAARRPASGPQDGEPNAKDQEEDDKTTRERKAAQERKARRVXXXXXXXXXXXXXRLQRLKELEELIAAEEKEDGDGSAEGDSXXXXXXXXXXXXXXASLCIVCMAEKRNACLVHGKTAHLVVCLPCGKRLKKANMGCPICKRRIDVVIESFTS 899
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BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: A0A0B6XV46_9EUPU (RING-type domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6XV46_9EUPU)

HSP 1 Score: 71.2 bits (173), Expect = 6.720e-11
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 1 
Query: 2554 CIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 2709
            C+VC+T +K A ++HGKT HQV C  CA RLK+    CPIC+R I  VI NF
Sbjct:   85 CVVCLTRRKTASIIHGKTGHQVCCYRCARRLKEQRKSCPICRRPIQKVIRNF 136
[Close]
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: UPI001CF2EB3D (protein Mdm4-like isoform X2 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF2EB3D)

HSP 1 Score: 75.9 bits (185), Expect = 9.760e-11
Identity = 28/53 (52.83%), Postives = 42/53 (79.25%), Query Frame = 1 
Query: 2551 LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 2709
            LC++C+T+ +NA LVHG+T HQV C+ CA RLK+    CP+C+++I LV++NF
Sbjct:  342 LCVICLTQPRNASLVHGRTGHQVCCIECAERLKENKKRCPVCRKKIKLVVKNF 394
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BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: UPI0009E593B8 (E3 ubiquitin-protein ligase Mdm2-like isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E593B8)

HSP 1 Score: 75.5 bits (184), Expect = 1.020e-10
Identity = 27/53 (50.94%), Postives = 42/53 (79.25%), Query Frame = 1 
Query: 2551 LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 2709
            LC++C+T+ +NA +VHG+T HQV C+ CA RLK+    CP+C+++I LV++NF
Sbjct:  310 LCVICLTQPRNASIVHGRTGHQVCCIGCAERLKEGKKKCPVCRKKIKLVVKNF 362
[Close]
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: UPI0010FCC66B (protein Mdm4-like isoform X1 n=3 Tax=Acropora millepora TaxID=45264 RepID=UPI0010FCC66B)

HSP 1 Score: 75.9 bits (185), Expect = 1.120e-10
Identity = 28/53 (52.83%), Postives = 42/53 (79.25%), Query Frame = 1 
Query: 2551 LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 2709
            LC++C+T+ +NA LVHG+T HQV C+ CA RLK+    CP+C+++I LV++NF
Sbjct:  363 LCVICLTQPRNASLVHGRTGHQVCCIECAERLKENKKRCPVCRKKIKLVVKNF 415
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BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: A0A7R9Z1H2_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z1H2_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.990e-10
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 1 
Query: 2533 DEGDEILCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 2709
            DE  + LC+VC++E++NA +VHG+T H   CL CA  LK   M CP+C+ +ID VI++F
Sbjct:   61 DEQQQKLCLVCLSEERNATIVHGETGHIACCLTCARILKFRKMKCPVCRLKIDTVIQHF 119
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BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: A0A3M6UVS1_POCDA (Uncharacterized protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UVS1_POCDA)

HSP 1 Score: 72.8 bits (177), Expect = 9.130e-10
Identity = 27/53 (50.94%), Postives = 41/53 (77.36%), Query Frame = 1 
Query: 2551 LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 2709
            LCI+C+T+ +NA +VHG+T H V C+ CA RLK+    CP+C+++I LV++NF
Sbjct:  334 LCIICLTQPRNASIVHGRTGHLVCCIGCAERLKEEKKKCPVCRKKIKLVVKNF 386
[Close]
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: A0A2B4RC15_STYPI (Protein Mdm4 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RC15_STYPI)

HSP 1 Score: 70.5 bits (171), Expect = 4.380e-9
Identity = 26/53 (49.06%), Postives = 40/53 (75.47%), Query Frame = 1 
Query: 2551 LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 2709
            LCI+C+ + +NA +VHG+T H V C+ CA RLK+    CP+C+++I LV++NF
Sbjct:  312 LCIICLMQPRNASIVHGRTGHLVCCIGCAERLKEEKKKCPVCRKKIKLVVKNF 364
[Close]
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: A0A833YJ51_9CHIR (MDM4 regulator of p53 n=1 Tax=Phyllostomus discolor TaxID=89673 RepID=A0A833YJ51_9CHIR)

HSP 1 Score: 68.6 bits (166), Expect = 8.110e-9
Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = 1 
Query: 2554 CIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENF 2709
            C VC    ++  ++HGKTSH VTC PCA RLKKA   CPICK+ I LVI  F
Sbjct:  225 CSVCEKRPRDGNIIHGKTSHLVTCFPCARRLKKAGASCPICKKAIHLVIRVF 276
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BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Match: A0A3Q3VYW2_MOLML (RING-type domain-containing protein n=1 Tax=Mola mola TaxID=94237 RepID=A0A3Q3VYW2_MOLML)

HSP 1 Score: 63.5 bits (153), Expect = 1.020e-8
Identity = 24/54 (44.44%), Postives = 36/54 (66.67%), Query Frame = 1 
Query: 2554 CIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVIENFTS 2715
            C++C ++ KN C+VHG+T H ++C  CA +LKK N  CP+C+  I  VI  + S
Sbjct:   40 CLICQSQPKNGCIVHGRTGHLISCYICARKLKKRNKLCPVCRLPIQSVIFTYLS 93
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig870.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN63_ECTSI9.900e-29653.03Mdm2, transformed 3T3 cell double minute 2, p53 bi... [more]
A0A0B6XV46_9EUPU6.720e-1155.77RING-type domain-containing protein (Fragment) n=1... [more]
UPI001CF2EB3D9.760e-1152.83protein Mdm4-like isoform X2 n=1 Tax=Acropora mill... [more]
UPI0009E593B81.020e-1050.94E3 ubiquitin-protein ligase Mdm2-like isoform X1 n... [more]
UPI0010FCC66B1.120e-1052.83protein Mdm4-like isoform X1 n=3 Tax=Acropora mill... [more]
A0A7R9Z1H2_9STRA1.990e-1049.15Hypothetical protein n=2 Tax=Pseudictyota dubia Ta... [more]
A0A3M6UVS1_POCDA9.130e-1050.94Uncharacterized protein n=2 Tax=Pocillopora damico... [more]
A0A2B4RC15_STYPI4.380e-949.06Protein Mdm4 n=2 Tax=Stylophora pistillata TaxID=5... [more]
A0A833YJ51_9CHIR8.110e-957.69MDM4 regulator of p53 n=1 Tax=Phyllostomus discolo... [more]
A0A3Q3VYW2_MOLML1.020e-844.44RING-type domain-containing protein n=1 Tax=Mola m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig870contigP-littoralis_Contig870:8559..16683 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog10029.XP_007636997.1
Preferred nameMDM2
PFAMsSWIB,zf-C3HC4_3,zf-RanBP
Model size2718
Max annot lvl33208|Metazoa
KEGG koko:K06643
KEGG Pathwayko01522,ko01524,ko04068,ko04110,ko04115,ko04120,ko04144,ko04151,ko04218,ko04919,ko05165,ko05169,ko05200,ko05202,ko05203,ko05205,ko05206,ko05214,ko05215,ko05218,ko05219,ko05220,map01522,map01524,map04068,map04110,map04115,map04120,map04144,map04151,map04218,map04919,map05165,map05169,map05200,map05202,map05203,map05205,map05206,map05214,map05215,map05218,map05219,map05220
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000077,GO:0000122,GO:0000278,GO:0001568,GO:0001655,GO:0001666,GO:0001822,GO:0001944,GO:0001974,GO:0002027,GO:0002039,GO:0003007,GO:0003170,GO:0003171,GO:0003179,GO:0003181,GO:0003197,GO:0003203,GO:0003205,GO:0003206,GO:0003230,GO:0003231,GO:0003279,GO:0003281,GO:0003283,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004842,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006974,GO:0006977,GO:0007049,GO:0007089,GO:0007093,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0007399,GO:0007507,GO:0008016,GO:0008097,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0008284,GO:0009056,GO:0009057,GO:0009314,GO:0009628,GO:0009653,GO:0009719,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010165,GO:0010212,GO:0010243,GO:0010332,GO:0010466,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010721,GO:0010941,GO:0010948,GO:0010951,GO:0010955,GO:0010975,GO:0010977,GO:0012506,GO:0014910,GO:0014911,GO:0016020,GO:0016043,GO:0016567,GO:0016579,GO:0016740,GO:0016874,GO:0016925,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019788,GO:0019789,GO:0019843,GO:0019899,GO:0019904,GO:0019941,GO:0022008,GO:0022402,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030139,GO:0030154,GO:0030162,GO:0030163,GO:0030330,GO:0030334,GO:0030335,GO:0030659,GO:0030666,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031344,GO:0031345,GO:0031410,GO:0031570,GO:0031571,GO:0031625,GO:0031647,GO:0031648,GO:0031974,GO:0031981,GO:0031982,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032388,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032835,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033157,GO:0033365,GO:0033554,GO:0033612,GO:0034504,GO:0034613,GO:0035556,GO:0035775,GO:0035902,GO:0036211,GO:0036293,GO:0036294,GO:0036369,GO:0039019,GO:0039021,GO:0040012,GO:0040017,GO:0042127,GO:0042176,GO:0042221,GO:0042770,GO:0042802,GO:0042975,GO:0042981,GO:0043021,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043281,GO:0043412,GO:0043516,GO:0043518,GO:0043632,GO:0043933,GO:0044057,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0044877,GO:0045184,GO:0045202,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0045732,GO:0045786,GO:0045787,GO:0045861,GO:0045862,GO:0045892,GO:0045930,GO:0045931,GO:0045934,GO:0046677,GO:0046822,GO:0046824,GO:0046825,GO:0046827,GO:0046872,GO:0046914,GO:0047485,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048660,GO:0048661,GO:0048699,GO:0048729,GO:0048731,GO:0048771,GO:0048793,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051270,GO:0051272,GO:0051336,GO:0051346,GO:0051603,GO:0051641,GO:0051716,GO:0051726,GO:0051865,GO:0051960,GO:0051961,GO:0052547,GO:0052548,GO:0060255,GO:0060284,GO:0060341,GO:0060411,GO:0060485,GO:0060548,GO:0061136,GO:0061630,GO:0061659,GO:0061663,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070482,GO:0070613,GO:0070646,GO:0070647,GO:0070727,GO:0070887,GO:0071156,GO:0071157,GO:0071158,GO:0071214,GO:0071236,GO:0071310,GO:0071417,GO:0071453,GO:0071456,GO:0071478,GO:0071479,GO:0071480,GO:0071495,GO:0071704,GO:0071840,GO:0071944,GO:0072001,GO:0072006,GO:0072102,GO:0072132,GO:0072331,GO:0072358,GO:0072359,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0072716,GO:0072717,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090087,GO:0090316,GO:0097110,GO:0097159,GO:0097435,GO:0097708,GO:0097718,GO:0098588,GO:0098805,GO:0104004,GO:0120035,GO:0140096,GO:1900087,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901796,GO:1901797,GO:1901800,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902253,GO:1902254,GO:1902400,GO:1902402,GO:1902403,GO:1902531,GO:1902532,GO:1902679,GO:1902806,GO:1902807,GO:1902808,GO:1903047,GO:1903050,GO:1903052,GO:1903317,GO:1903318,GO:1903362,GO:1903364,GO:1903506,GO:1903507,GO:1903522,GO:1903827,GO:1903829,GO:1904035,GO:1904036,GO:1904705,GO:1904707,GO:1904752,GO:1904754,GO:1904951,GO:1990000,GO:1990785,GO:2000026,GO:2000045,GO:2000058,GO:2000060,GO:2000112,GO:2000113,GO:2000116,GO:2000117,GO:2000134,GO:2000145,GO:2000147,GO:2001020,GO:2001021,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
Exons18
Evalue3.82e-09
EggNOG OGs2C54B@1|root,2QQNV@2759|Eukaryota,38CCR@33154|Opisthokonta,3BC1S@33208|Metazoa,3CWET@33213|Bilateria,4884C@7711|Chordata,4957B@7742|Vertebrata,3JE75@40674|Mammalia,35DZ0@314146|Euarchontoglires,4Q42D@9989|Rodentia
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-06_008540.1
EC2.3.2.27
DescriptionE3 ubiquitin-protein ligase
Cds size2718
COG categoryK
BRITEko00000,ko00001,ko01000,ko04121,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791749.8098972-CDS-P-littoralis_Contig870:8558..86871680791749.8098972-CDS-P-littoralis_Contig870:8558..8687Pylaiella littoralis U1_48CDSP-littoralis_Contig870 8559..8687 +
1680791749.825971-CDS-P-littoralis_Contig870:9147..93411680791749.825971-CDS-P-littoralis_Contig870:9147..9341Pylaiella littoralis U1_48CDSP-littoralis_Contig870 9148..9341 +
1680791749.8392985-CDS-P-littoralis_Contig870:9600..97811680791749.8392985-CDS-P-littoralis_Contig870:9600..9781Pylaiella littoralis U1_48CDSP-littoralis_Contig870 9601..9781 +
1680791749.8541882-CDS-P-littoralis_Contig870:9980..102051680791749.8541882-CDS-P-littoralis_Contig870:9980..10205Pylaiella littoralis U1_48CDSP-littoralis_Contig870 9981..10205 +
1680791749.8663135-CDS-P-littoralis_Contig870:10545..106521680791749.8663135-CDS-P-littoralis_Contig870:10545..10652Pylaiella littoralis U1_48CDSP-littoralis_Contig870 10546..10652 +
1680791749.8805845-CDS-P-littoralis_Contig870:11102..112021680791749.8805845-CDS-P-littoralis_Contig870:11102..11202Pylaiella littoralis U1_48CDSP-littoralis_Contig870 11103..11202 +
1680791749.89667-CDS-P-littoralis_Contig870:11556..117061680791749.89667-CDS-P-littoralis_Contig870:11556..11706Pylaiella littoralis U1_48CDSP-littoralis_Contig870 11557..11706 +
1680791749.9164-CDS-P-littoralis_Contig870:11944..120901680791749.9164-CDS-P-littoralis_Contig870:11944..12090Pylaiella littoralis U1_48CDSP-littoralis_Contig870 11945..12090 +
1680791749.9291391-CDS-P-littoralis_Contig870:12359..124591680791749.9291391-CDS-P-littoralis_Contig870:12359..12459Pylaiella littoralis U1_48CDSP-littoralis_Contig870 12360..12459 +
1680791749.942098-CDS-P-littoralis_Contig870:12749..128881680791749.942098-CDS-P-littoralis_Contig870:12749..12888Pylaiella littoralis U1_48CDSP-littoralis_Contig870 12750..12888 +
1680791749.9594836-CDS-P-littoralis_Contig870:13084..132421680791749.9594836-CDS-P-littoralis_Contig870:13084..13242Pylaiella littoralis U1_48CDSP-littoralis_Contig870 13085..13242 +
1680791749.9737296-CDS-P-littoralis_Contig870:13597..137351680791749.9737296-CDS-P-littoralis_Contig870:13597..13735Pylaiella littoralis U1_48CDSP-littoralis_Contig870 13598..13735 +
1680791749.9885156-CDS-P-littoralis_Contig870:14043..141531680791749.9885156-CDS-P-littoralis_Contig870:14043..14153Pylaiella littoralis U1_48CDSP-littoralis_Contig870 14044..14153 +
1680791750.0014763-CDS-P-littoralis_Contig870:14438..147841680791750.0014763-CDS-P-littoralis_Contig870:14438..14784Pylaiella littoralis U1_48CDSP-littoralis_Contig870 14439..14784 +
1680791750.0198007-CDS-P-littoralis_Contig870:14979..150531680791750.0198007-CDS-P-littoralis_Contig870:14979..15053Pylaiella littoralis U1_48CDSP-littoralis_Contig870 14980..15053 +
1680791750.0358078-CDS-P-littoralis_Contig870:15428..155221680791750.0358078-CDS-P-littoralis_Contig870:15428..15522Pylaiella littoralis U1_48CDSP-littoralis_Contig870 15429..15522 +
1680791750.0511842-CDS-P-littoralis_Contig870:15786..158431680791750.0511842-CDS-P-littoralis_Contig870:15786..15843Pylaiella littoralis U1_48CDSP-littoralis_Contig870 15787..15843 +
1680791750.0642157-CDS-P-littoralis_Contig870:16413..166831680791750.0642157-CDS-P-littoralis_Contig870:16413..16683Pylaiella littoralis U1_48CDSP-littoralis_Contig870 16414..16683 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig870.1.2prot_P-littoralis_Contig870.1.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig870 8559..16683 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig870.1.2

>prot_P-littoralis_Contig870.1.2 ID=prot_P-littoralis_Contig870.1.2|Name=mRNA_P-littoralis_Contig870.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=906bp
QAWDHCDFVRSLDQVMLFPPSFQPLVIFQEAQVDAFTAAEHERVSPLNGC
MWRGRKGSGVVNCVEGLGMLQHLRDSRLIPYRFGCNCLYKHPGLKHLLDG
RHSRQEMGYSPGAFPQLMHINPSMSEPVLLRRNKDGLAPGAIAFAGAEFV
VLGKTVVGVEEVWEVVFELFEIVPGGDESEDDAPTPSLEGLPESQAKHGT
GKSTLFVPSTLQGKPTLVEGQAPTDIDRLKAWHMNPEYHAISHHVWCMED
FRIFLFFHRLLVTLCAVCFSVTRLSGLVRIAICGFILWQTTRISKWDDLV
YKYYRSGAGKSMMVVVWMLVWLWVRVRHVMKLASMLARELLTGAMALPDF
LLPRKLALLIYAVAGFLALLVRFVLGLIIFVYDTSIDAMVTRLPQIPGLV
GTVNFVDYAIGFVFAVAMTLLGVLVTLLRWWYCPPEESLLVQTEKRFRDL
LGRTDANSKTQFAELLCKLVFDLRSKKDLAIDRRRRAKGHGANDCSGERR
AGAHACLAALAVAAVKLKRRASSREEAAITRILVKSGTIRDSLVRTARVM
LATNPARAVSEVAHELMHAAHAGLIWPDEPLIKLALQSEGKDPTTENVSW
HRAKWVAVAAKMVVDRESQPSEQHTWFKLHDSGECEEMNYRDCNIHPAER
CVACYTQDYTQDGGRRSSAGSTHMTIEGRKPSSRLSACKSAVVVDSRRRK
IRPHYEVEADDCRVVRASSRVATGETEEFPFFHKKARQPKEVESERSRRL
AARLKNLDDKFREFVRLDKDMEKANASQGRQKSTNAQNEKAAQERAAAQE
RRARRVKARRDRAIEAEALRQRRLQDLKVVVAADLDATDGSSDDDEGDEI
LCIVCMTEKKNACLVHGKTSHQVTCLPCANRLKKANMGCPICKRRIDLVI
ENFTS*
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mRNA from alignment at P-littoralis_Contig870:8559..16683+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig870.1.2 ID=mRNA_P-littoralis_Contig870.1.2|Name=mRNA_P-littoralis_Contig870.1.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8125bp|location=Sequence derived from alignment at P-littoralis_Contig870:8559..16683+ (Pylaiella littoralis U1_48)
CAGGCATGGGACCACTGCGATTTCGTCCGGTCCCTCGACCAGGTCATGTT
ATTCCCACCAAGCTTTCAGCCTTTGGTAATTTTCCAAGAGGCACAAGTGG
ATGCCTTCACGGCGGCAGAGCACGAGAGGGTAAGCTGTGCATTTTCATGG
TCTGTATTGTACATATCTGAAATTACCCCTTTCCATCCTTGCACCTACAA
GTGGTCATATATCTACTTCCTGAACTTAGGTTCGTACACGTATCATTCGA
GATGACACCCGCCGTGATGCTGGTATGCATTTTTGCTTTTTTTCTCCGCA
CGTCCTTCATGTGGAGTTTGAGCCCCTCAGCTACGAGTAGAGGAGCGTGG
GGACACGCGTACAAAGCCGATATGCAGTACAGGCGGTGCTGAAATGCCAA
CCATAGAGTAAGGGAAAGGTGGCACGCAAGGTTCCTGGTTGGAAGGAAGT
AACTTCAGTTTTCGCCGCGGCGGTCACGGTTGCTGTCTGTTCATGACGCA
AGTTTTTTCAACGCATGAACAACGGTCCAGCCAACCCGTGTCGCCTACCG
GTACCCCCCTCTATCATCTTGCCAACTGATACACAACAGGTGTCTCCGCT
AAACGGGTGTATGTGGCGAGGACGAAAAGGGAGCGGCGTGGTGAACTGCG
TTGAGGGCTTGGGCATGCTCCAGCACCTCCGAGACAGCAGGCTGATTCCG
TATCGTTTCGGATGTAACTGCCTCTACAAGCATCCGGGACTGAAGCACTT
GCTTGACGGTCGACACAGCAGGCAAGAGATGGGGTTCAGTAGTCCTGCCA
CTTGTTGCACTCTGAGGCGGGGACCCGGTCGCTTGAACGAGTTCGCCACA
CTCACTTGTGGTGAAATCACTGCACAACGGATGACTTGGTTGACAGCCGG
TTCCTGTTTTAAGGCTGGAACTGGCGCGATATATTGTTGTGTGAAGTTCG
CGTTGTATGTGCCTATTCGGTGTGCGTCGGGCGCTTCTTCGCTTTGACAA
GAGTCCCTCTTTCACTATTTCTCTGCCGCCACCACCCGTCAGCTACTCGC
CCGGAGCATTTCCGCAACTGATGCACATCAACCCGTCGATGAGCGAGCCG
GTGCTCCTTCGACGGAATAAGGACGGTCTAGCGCCGGGGGCTATTGCCTT
TGCGGGCGCCGAGTTCGTTGTGCTCGGAAAGACCGTGGTCGGAGTCGAGG
AAGTGTGGGAGGTTGTTTTTGAGGTGATTTGTGTGAACGAGTGTCTTTTC
ATTGAGAACAAGGCTGTATCGTACGGGAACATCACCAAAGGTTGTCACTG
CCGTTTCTTTGTTGCCAAAGGGTGAGACCGTTTTTTTTACACGTGTGACT
GGTCTTGTCATTGCTTGCCCTTCTTTGCGTTCACAGAACACAACCCGCTT
CGTCGCGTCCGTCCCCTGGCAGCTCTTCGAAATTGTACCAGGCGGGGACG
AGAGCGAGGACGACGCGCCGACGCCTAGCCTAGAAGGTCTTCCTGAATCC
CAAGCGAAACACGGCACGGGCAAGTCGACGCTCTTCGTGCCTTCGACTTT
GCAAGGAAAGCCGACGCTTGTAGAGGGACAAGCACCGACCGACATCGACC
GTTTGAAGGCGTGGCACATGAACCCAGAGTATCACGCGATCTCACACGTG
AGACGAACAGGATGGGTTTCGCCGCATGACTTGTATTCGTCGAGGTTACT
TCTTGGCCGTAGAGGTATCTTGAGGGAGCAAGTAGAGTAGAGCTGAAGTT
GGTCATGTTGTGGTCTTGGATTGTGAAATGGGTGGAGATCATTTTTGCGT
TGGACCACAGATAACTCCCCGGCAAGGCATACTGGGTGTCGGTCACCTAC
TACCTCCAACCATTCTCAGGCAAATATTTTCCCCGTCTGCCTTCGTGTGT
CGCCTCTCCCCCATGCCTTGGCGCCCGGCGCCCTCTCTACGAATGGACGG
TTGATTACTTTTGCTGTGTTCTTCCGCGATACCGCAGCATGTATGGTGCA
TGGAAGACTTCAGGATCTTCCTGTTTTTTCACCGGCTCCTCGTCACCCTT
TGCGCGGTATGCTTCAGCGTCACTCGTCTGTCCGGCCTCGTACGGTGAGT
CGTGCGAGGCTGCATGATTACGGTCCTCTGCCTGCTGTTGTGTTTTTCAC
ATGTGTGCCTCGGTATCCCACTTCTGCTCTCTCCTGTGAGACGTCCGAAG
ATGAAGCGGGTTACTTCTTTTGGCAGTTAGGATCAGCTGTACCAGAACCA
GAAAGGATGGAGTGTTCACGGTGTTTAAGTTGGAAAGGAATATGCCTGGG
TTGGTCTGCGGTATGTTTACCTTCCGTCCGCTCCAAATACTGGCTACAGC
AAGGGCAACCCGTAAGATTGCGAGTCGTCGCAGTCGTTGAACCATATTAT
ATCACTTTGTCCATCGTATCTTGTTTTTGGCCCTGCCGCGACGTTGCCAA
AGGAATGTCAACTATTTCGCAGCAGCCGAGCATCGAGACGCCTCCCTCAC
CCGGCAGACTCGTTCTCTGTCTACCTCTTGTCCCCTTCGACCAGGATTGC
CATCTGCGGGTTTATCCTGTGGCAGACAACTCGAATCTCCAAGTGGGACG
ACTTGGTGTACAAGTACTACCGATCGGGCGCGGGGAAAAGCATGGTGCAT
ATCTGTGTGGTTATTTATTAGCAATGAAATGTGCAGCGAGTCGTATGGGT
GCCCTTCCATTCCCTTGACATACGGACAGGCAGAAGCGGTGGCGAGGTGT
TTTTGGTTGATATGTGCTGTTGCGCGGCGTGCACCTTTTGGAGGCGAAAT
ACGTACTTGTACCTGGTGCGCGAGTTTCCGACGTTTCCCCAGCTCTCCAC
ATAGCATTGGCCTTGGTGACTGGCTTCCTTATTGTATGAACGTGCTTCAA
GCAGCCCGACTTCATCAGGGCACACCATTGAGTGCTGTGACTCTTCTTCG
TGCCATTTAATGCGGTTGTAACTCCCCCCTCCTGGTGCCTTTCTGCAGAT
GGTAGTCGTTTGGATGTTGGTCTGGCTATGGGTGAGAGTGCGTCATGTGA
TGAAACTGGCGAGCATGCTAGCGCGGGAGCTGCTCACCGGCGCGATGGCT
CTTCCCGACTTTCTCTTACCCAGGAAGCTGGCTCTCCTCATCTACGCCGT
GAGTCGTGCGCTGTTGACAATCTGTTTCTAGCAGATCACATGACGCGAAG
CTTCTGCCCAGCACGTTGTTGTGAAAGGGAAAGGTGGCACTGATCAATCG
CGAAACTGCGTGCCACTTTTCCCTTTCTCCGTCCATCGTGTTCGAAACAA
GTTTTATGAACAGACGCGAGGAAATGATCGTTTAACATACTTTTACTGAA
TTCTTCTATCCCTGCGGACCTACCCCTGACCGGCAGGTGGCTGGATTCTT
GGCATTGTTGGTGCGGTTTGTATTGGGGCTAATAATTTTTGTTTACGATA
CTTCGATCGACGCGATGGTCACGCGCCTACCTCAGATACCAGGGCTGGTT
GGGACTGTGAACTTCGTGGACTACGCTATCGGGTGAGCCTTGGCAATCGT
GTTGTGCGGGTGTGTTGGAGCGTGTGTGGTTCGCGGTTTCTCCCGCGATA
CTGCAGGTACAGTCGGATCACACGCTAGATTTTCGACCCTTCCCAACAAC
CCATTTCCTGCTCAGCATAACGCTTGTGCATAACTTGCAGTGCTTGGCGT
GGCCGAGAAAATTAGCGTGTTGCCTTGTCGTCTTATGGCTGTTTGCCCGT
TTCCTGAGCCGACCCCCGGGGCGATCCTGTTTATTTTATCACCTTTTCCA
GATTCGTTTTCGCTGTCGCTATGACTTTACTGGGGGTCCTTGTAACCCTT
CTTCGTTGGTGGTACTGCCCTCCGGAGGAATCACTGTTAGTTCAGACAGA
GGTGAGTTCAGACCACCACACGATTGAGTGGTAACTGGAGCGAGAGAGGT
TATGTGGTAGCACCTGCCGTTTGAGCATCACGCCTGAAATTATCGAGAGC
TTATGCAATATTTAATCGTCTTAATCGTCATGTTGAAAGGGTTCTTTCCC
ATGGCGTACTGGAAGCAACCACTCGTAACGTGACGATTGTGTGGAGCGTG
AAACCTTGCTGTTGCTGTTTACGGCCAATCTTTTTCTCGACACGCCTTCG
CCCTCGCCCTTGTTTCTTTTGAAAAATTGGCTTCGTTTCAGAAACGCTTT
CGAGATCTGTTGGGTCGAACTGACGCCAACTCGAAGACGCAATTCGCAGA
GCTATTGTGCAAGCTTGTCTTCGACCTCCGTAGTAAAAAGGACCTGGCTA
TTGATCGGCGACGACGCGCGAAAGGCCATGGTGAGGGTCTAGACTCACAG
CGCTCAAGATTCGTGTGTTTTCCGTCACATTAAAACACGTGGTTTATGCG
CCGCAATCACTGCTGCTTTTGGTTTGCTATTGGCTCTTGGTGGATGACCA
CCGCTTTTCCCCGATGAGCCACAGACGTTCTTGCTCATCAGTGATTGCTG
TCGGCGATGTCATCACGCGACGATAGGTGCCAATGACTGCTCCGGGGAGC
GCCGCGCCGGCGCTCATGCTTGTCTTGCCGCTCTTGCTGTAGCTGCGGTG
AAACTCAAGAGGAGGGCTTCATCTCGAGAGGAGGCCGCCATCACCCGTAT
TCTCGTCAAGAGTGGCACCATCCGTGACAGTTTGGTGAGTGTTCGTCATC
ACGCAGATGCTTCGGGCATCCAGCCTGCGTTCGTTTGCTTCGTCGTGCCG
TACGAAAGCCACCATAGGAGTAGCACGGTGCTTGCCACACTCTTGAAAGA
AGTTTGGTGCGAACAAATCACCCGGAGTTTGTGTTCCAAAGCGCCTTTCG
GAGTCCGTGGTAAAGCGGGGATGCCACTCGAGTCTCGTATCTGTTCCTTC
AACTGATCTTCACCCATCGGTCCTGCGGCCCTCCGCGTCGCGTGCGGTGA
TCTGTGCCGCACAAACCTCGCCTAGCATTAGTCTGCTGCTGACCTATCCG
CCCATGTGTCTTTCTCGCGCGATGCAATGCGACTTTCAGGTGAGAACTGC
CCGCGTTATGCTTGCGACCAATCCAGCGAGAGCAGTCTCGGAAGTTGCTC
ACGAGCTTATGCACGCCGCACATGCTGGCTTGATCTGGCCGGACGAGCCG
TTAATTAAGCTTGCCCTGCAATCGGAGGTAAGGGATGGTGACATATTTTC
GCTTTGTGGTTACCATGGGGGCCGACAACCACCGGTGGTGCAATCGCGGA
GAAATTGAAATTGACATAAGATCGACCTCTTTGACTCGGGGATTCTCGGC
GGAGCGGTCTCATCCATCCACTGGACGTGACAGCACGTCAGTCACCGCAT
CGTAAACTCCGCCGTGGTATTGCTACCAGTACATCGATAAACATGTCTCA
GTTGTTTTGCAGCCAGTGCGCATCGTGTTTTTCTTATTTGCTGACTGTGC
TGTTTCGATGTGCCACTGTTGTATTTTTGACACAGGGCAAGGATCCAACT
ACAGAAAATGTTTCATGGCACCGTGCCAAGTGGGTGGCAGTTGCGGCAAA
AATGGTGGTAGATCGAGAATCTCAACCTTCTGAGCAGCACACTTGGTGAG
AACGATGAGTTATTATGACGTTCATGCTTTTCCACTCCGCCTCAGCGTAC
CGTGCACATAGTGTATTTCTGGCCGACTACTGCAGCAAAGTGAGTCTTTA
TTTTGGGGGTTTTGTCGCGCGTGCAGAATCTGCTTCAAGTCTCAACGGAC
CAGGCGCCGACAAATCGCCAAGCACCGTACGCAACTTTTCAGTGGTGCAC
CGACCTGAGCAAGTTGGCTAACTGTCAAGTCTGTTGTTTTGTTACAGCAT
CCTGCTCTGCTTCTTCGCTCCGATCTCTAGGTTTAAACTTCATGACTCGG
GGGAATGCGAAGAAATGAACTATCGTGATTGCAATATCCATCCTGCCGAA
CGGTGTGTTGCGTGCTACACTCAAGACTACACTCAAGACGGGGGCCGCCG
CTCCTCAGCTGGCTCTACCCACATGACGATAGAAGGCCGTAAACCATCGT
CCCGGCTCTCTGCGTGCAAGTCGGCCGTTGTCGTGGACTCGAGACGGCGG
AAAATACGGCCGCACTACGAAGTGGAGGCGGATGACTGTCGTGTCGTACG
TGCGTCTTCCCGCGTTGCAACTGGCGAGACCGAGGAATTTCCTTTCTTTC
ACAAAAAGGCCAGGCAGCCCAAGGAGGTAAGGACGGAGGGGAAGCAGAAC
TGCATGCGGGTGCATATTATTGCGTGTTGTTTTCCCAGATGAGCTATCTT
TAAATGGAGAAAGAGCTGCGCGGGTGTTCTTGCAGCCAGACTGCATCATA
CAAGGAGAAAAATGTTGATAGACTGCATTGTGTCGATGCTTGATATCACA
TTTTCTGCTGAACTACCGAAGGTTGAATCGGAACGCTCGCGGCGGTTGGC
TGCTCGGCTGAAGAACCTCGACGACAAGTTCCGGGAGTTCGTAAGGTACG
TTTCGCTTCGCCTTGCGTCAGAGTGCGAGCGTCATTCCACGTGCGCTGCA
TTGCTATTTGTCACGTACGAAACCGAACGAAAACATGCCGACAAAGCGCC
CAGCTCTAGCGACTGCGAAAGCCGAGCGTTCATGGAGCGGCATGGGTTCT
TGATTGTTCCGATGCATGATGCAGGCATCTTTCGACGTGTAGTCTGTGTT
CGTCACGCTGGATAGGATTGAGTGTTTCAGAGAGTCCAAACACTTTTGTT
TTTTTGTCTTCTCATTTTTGCTGGTATTCTTGTTCCCTTCACCATTTTCC
TGATCACTGTTGTTCGTTTCGTCTCTTTAACGGGTTTGGTGCTGGATTTT
GATGTCATCTCACCTCTCAGACTCGACAAGGACATGGAGAAAGCAAACGC
GTCGCAAGGCCGCCAGAAATCAACAAACGCGCAGAATGAAAAAGCTGCTC
AGGAGCGCGCAGCGGTGCGTGTTCTTACTGCATGAGCTTTTTTGTCCTTT
CGTGTCTGGATTACATCCTGTGGTGCATGTTGAGGTTGAAATCGGGGTCT
GCTCCACGACAGACTGAAGTGATGATAGGTGGATAGTAGGTGGCATTGTT
GTAGAGACATTTCTCCAATATGCCAAATGCTACCAGTATTTCATACGAGG
ACGTTGAAGCGATGTCGCAACAGCATTTTTTTCTCGCCCGCGTCGGGGAT
GTGTCTGGTGTTCTGTCTGCTTCCACAGGCTCAAGAGCGAAGGGCGCGCC
GTGTGAAGGCTAGGAGAGATCGGGCGATCGAGGCGGTGAGTTCAGTGGCA
TGTGTGATCGGCCTTTGGTGACATTTTAGCGTGCGTGCATCGACCGGTCG
CCCGGTGGTTCAGTTGATCATCCCCGAAATCTTCTGACACTCACGCTTGA
GTTCGAATCCCGGTGCAGTAACACGATCCGGGATTTTTCTCATGCCATGC
GTGAGGGTGGAAAGCAATTAATTCGTGAGTATACAAATTTCGAAGTGTCG
ACGAGGGAAAGGGATCGCTGTACCCTTTCTCGCGAGAAAAAATTTAGGCA
AGCACCGCAGTGGGAAGTGGAGAAAAAGAAAAAAGAAGAAAAAAAATCCT
GTGTTGACTTCCTACTGTGTGACCCCGGTTGGAGCGTCTACCTTTACCCG
AAAGGTGTAGGTGGCGTCCAATTAATGGGATGACAACACACACACACACA
TCGCTATGAGCTTTCTTCCCTGTGCGAGGTTCAAACTCACCCGACCCGAT
GAAGGCTGTTGGGAGTTGAACGAGAGGACGGCACCACCATTCCGCAAGTG
TGTACTGCAGATTTGAACATGATACCCCCCTTGCTTGTGCGTGCCGGTCT
TCCAGGAGGCCTTGCGGCAGCGGCGTCTACAAGATTTGAAAGTAGTTGTT
GCTGCTGATTTGGACGCTACTGACGGATCATCCGATGACGATGAAGGCGA
CGAGATTTTGTGCATCGTATGCATGACAGAGAAGAAGAACGCCTGTCTGG
TTCACGGGAAGACCTCCCACCAAGTCACGTGTCTTCCATGCGCAAACCGG
CTGAAGAAGGCGAACATGGGTTGTCCGATCTGCAAGCGCCGGATAGACCT
TGTGATAGAAAATTTCACATCGTAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig870:8559..16683+

>mRNA_P-littoralis_Contig870.1.2 ID=mRNA_P-littoralis_Contig870.1.2|Name=mRNA_P-littoralis_Contig870.1.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2718bp|location=Sequence derived from alignment at P-littoralis_Contig870:8559..16683+ (Pylaiella littoralis U1_48)
CAGGCATGGGACCACTGCGATTTCGTCCGGTCCCTCGACCAGGTCATGTT
ATTCCCACCAAGCTTTCAGCCTTTGGTAATTTTCCAAGAGGCACAAGTGG
ATGCCTTCACGGCGGCAGAGCACGAGAGGGTGTCTCCGCTAAACGGGTGT
ATGTGGCGAGGACGAAAAGGGAGCGGCGTGGTGAACTGCGTTGAGGGCTT
GGGCATGCTCCAGCACCTCCGAGACAGCAGGCTGATTCCGTATCGTTTCG
GATGTAACTGCCTCTACAAGCATCCGGGACTGAAGCACTTGCTTGACGGT
CGACACAGCAGGCAAGAGATGGGCTACTCGCCCGGAGCATTTCCGCAACT
GATGCACATCAACCCGTCGATGAGCGAGCCGGTGCTCCTTCGACGGAATA
AGGACGGTCTAGCGCCGGGGGCTATTGCCTTTGCGGGCGCCGAGTTCGTT
GTGCTCGGAAAGACCGTGGTCGGAGTCGAGGAAGTGTGGGAGGTTGTTTT
TGAGCTCTTCGAAATTGTACCAGGCGGGGACGAGAGCGAGGACGACGCGC
CGACGCCTAGCCTAGAAGGTCTTCCTGAATCCCAAGCGAAACACGGCACG
GGCAAGTCGACGCTCTTCGTGCCTTCGACTTTGCAAGGAAAGCCGACGCT
TGTAGAGGGACAAGCACCGACCGACATCGACCGTTTGAAGGCGTGGCACA
TGAACCCAGAGTATCACGCGATCTCACACCATGTATGGTGCATGGAAGAC
TTCAGGATCTTCCTGTTTTTTCACCGGCTCCTCGTCACCCTTTGCGCGGT
ATGCTTCAGCGTCACTCGTCTGTCCGGCCTCGTACGGATTGCCATCTGCG
GGTTTATCCTGTGGCAGACAACTCGAATCTCCAAGTGGGACGACTTGGTG
TACAAGTACTACCGATCGGGCGCGGGGAAAAGCATGATGGTAGTCGTTTG
GATGTTGGTCTGGCTATGGGTGAGAGTGCGTCATGTGATGAAACTGGCGA
GCATGCTAGCGCGGGAGCTGCTCACCGGCGCGATGGCTCTTCCCGACTTT
CTCTTACCCAGGAAGCTGGCTCTCCTCATCTACGCCGTGGCTGGATTCTT
GGCATTGTTGGTGCGGTTTGTATTGGGGCTAATAATTTTTGTTTACGATA
CTTCGATCGACGCGATGGTCACGCGCCTACCTCAGATACCAGGGCTGGTT
GGGACTGTGAACTTCGTGGACTACGCTATCGGATTCGTTTTCGCTGTCGC
TATGACTTTACTGGGGGTCCTTGTAACCCTTCTTCGTTGGTGGTACTGCC
CTCCGGAGGAATCACTGTTAGTTCAGACAGAGAAACGCTTTCGAGATCTG
TTGGGTCGAACTGACGCCAACTCGAAGACGCAATTCGCAGAGCTATTGTG
CAAGCTTGTCTTCGACCTCCGTAGTAAAAAGGACCTGGCTATTGATCGGC
GACGACGCGCGAAAGGCCATGGTGCCAATGACTGCTCCGGGGAGCGCCGC
GCCGGCGCTCATGCTTGTCTTGCCGCTCTTGCTGTAGCTGCGGTGAAACT
CAAGAGGAGGGCTTCATCTCGAGAGGAGGCCGCCATCACCCGTATTCTCG
TCAAGAGTGGCACCATCCGTGACAGTTTGGTGAGAACTGCCCGCGTTATG
CTTGCGACCAATCCAGCGAGAGCAGTCTCGGAAGTTGCTCACGAGCTTAT
GCACGCCGCACATGCTGGCTTGATCTGGCCGGACGAGCCGTTAATTAAGC
TTGCCCTGCAATCGGAGGGCAAGGATCCAACTACAGAAAATGTTTCATGG
CACCGTGCCAAGTGGGTGGCAGTTGCGGCAAAAATGGTGGTAGATCGAGA
ATCTCAACCTTCTGAGCAGCACACTTGGTTTAAACTTCATGACTCGGGGG
AATGCGAAGAAATGAACTATCGTGATTGCAATATCCATCCTGCCGAACGG
TGTGTTGCGTGCTACACTCAAGACTACACTCAAGACGGGGGCCGCCGCTC
CTCAGCTGGCTCTACCCACATGACGATAGAAGGCCGTAAACCATCGTCCC
GGCTCTCTGCGTGCAAGTCGGCCGTTGTCGTGGACTCGAGACGGCGGAAA
ATACGGCCGCACTACGAAGTGGAGGCGGATGACTGTCGTGTCGTACGTGC
GTCTTCCCGCGTTGCAACTGGCGAGACCGAGGAATTTCCTTTCTTTCACA
AAAAGGCCAGGCAGCCCAAGGAGGTTGAATCGGAACGCTCGCGGCGGTTG
GCTGCTCGGCTGAAGAACCTCGACGACAAGTTCCGGGAGTTCGTAAGACT
CGACAAGGACATGGAGAAAGCAAACGCGTCGCAAGGCCGCCAGAAATCAA
CAAACGCGCAGAATGAAAAAGCTGCTCAGGAGCGCGCAGCGGCTCAAGAG
CGAAGGGCGCGCCGTGTGAAGGCTAGGAGAGATCGGGCGATCGAGGCGGA
GGCCTTGCGGCAGCGGCGTCTACAAGATTTGAAAGTAGTTGTTGCTGCTG
ATTTGGACGCTACTGACGGATCATCCGATGACGATGAAGGCGACGAGATT
TTGTGCATCGTATGCATGACAGAGAAGAAGAACGCCTGTCTGGTTCACGG
GAAGACCTCCCACCAAGTCACGTGTCTTCCATGCGCAAACCGGCTGAAGA
AGGCGAACATGGGTTGTCCGATCTGCAAGCGCCGGATAGACCTTGTGATA
GAAAATTTCACATCGTAA
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