mRNA_P-littoralis_Contig87.193.5 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig87.193.5 vs. uniprot
Match: D7G922_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G922_ECTSI) HSP 1 Score: 661 bits (1705), Expect = 2.880e-235 Identity = 371/461 (80.48%), Postives = 404/461 (87.64%), Query Frame = 2
Query: 56 MADPREFSDDDSEDSGFEESVGPTDRKKEQRLENDKYDMALEVSASASMDADAIGEGGSNPGEEKRDHVPGSGAPDDHAKTGAAADRLGLGQGLDVPFAREGRRRGTASTRESSDDEKAGEDVKNDQFDAAYDLSSADEDSSMDTREGADLAATKKRTIGAPPASERRPSLSTKPVPV-SGAVASAVAGLSSAAMRVGGGGSDXXXXXXXXXXXXXXNEDERSNPIKVEGAYDPADYAHLNVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPDNTPDELGFKVLDEPAASQSDSTVLELQLRAISKKQHGDVAVRSIENAHKNPAEIDKWIQSINDLHRTKPPPQVNYKKNMPDIELLMEAWPPEVEEILGNVNFLTPELDISLEDYARMMCAVMDIPVYDNIIESLHVLFTTFMEFKSNAHFMQIGAAGGGGAGVSLNFEYK 1435
MADPREFSDD S+DSGFEESVG +R KEQ L+NDKYD+ALEVSAS +ADA+G+G +PGEEK + GS +PD A+ GAAADRLGLG D P R RG++S +E+ G+DVKNDQFDAAYDLSSADE+SS+DTRE ADLA T++RTIGAPPASERRPSL+ P PV SG VASAVAGLSS+ M GGGGSD XXXXXXXXXXXXXN DERSNPIK+EGAYDPADYAHLNVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPD PDELGFKVLDEPAA+QSD+TVLELQLRAISKKQ+GDVAVRSIENAHKNPAEIDKWIQSINDLHRTKPPPQVNYKKNMPDIELLMEAWPPE EEI+GNVN LTPELD+ LEDYARM+CAVMDIPVYDNIIESLH+LFTTFMEFKSNAHFMQ+GAAGGG + NF+YK
Sbjct: 1 MADPREFSDDGSDDSGFEESVGSAERNKEQHLQNDKYDLALEVSAS---EADALGDG--SPGEEKGERASGSDSPD--ARIGAAADRLGLGSSTDAPSREAARGRGSSSAQET------GQDVKNDQFDAAYDLSSADEESSVDTREAADLATTQRRTIGAPPASERRPSLTATPSPVPSGTVASAVAGLSSSTMHPGGGGSDGXXXXXXXXXXXXXNGDERSNPIKIEGAYDPADYAHLNVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPDQNPDELGFKVLDEPAANQSDATVLELQLRAISKKQYGDVAVRSIENAHKNPAEIDKWIQSINDLHRTKPPPQVNYKKNMPDIELLMEAWPPEFEEIVGNVNLLTPELDMPLEDYARMVCAVMDIPVYDNIIESLHILFTTFMEFKSNAHFMQLGAAGGGAS----NFDYK 444
BLAST of mRNA_P-littoralis_Contig87.193.5 vs. uniprot
Match: A0A835YT86_9STRA (Intraflagellar transport complex B protein 46 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT86_9STRA) HSP 1 Score: 324 bits (830), Expect = 1.640e-105 Identity = 148/233 (63.52%), Postives = 193/233 (82.83%), Query Frame = 2
Query: 737 EGAYDPADYAHLNVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPDNTPDELGFKVLDEPAASQSDSTVLELQLRAISKKQHGDVAVRSIENAHKNPAEIDKWIQSINDLHRTKPPPQVNYKKNMPDIELLMEAWPPEVEEILGNVNFLTPELDISLEDYARMMCAVMDIPVYDNIIESLHVLFTTFMEFKSNAHFMQIGAAGGGGAGVSLNFEYK 1435
EGAY+PADYAHL+V+AE++DLFQYI RYK H+V+L+T+L+CFVPD+IP +G+MDAFLKVPRPD D+LGFKVLDEP+A QSD+ VLELQLRA++K++HGD AVRSIE AHK P E+++W+ SI +LHRTKPPPQV+YK++MPD++ LME WP E E++L PEL++SLE+YA+ +CA+MDIPVY+NIIESLH+LFT + EFK+NAHF A+G + L+ YK
Sbjct: 22 EGAYNPADYAHLSVAAEVRDLFQYIVRYKPHDVELETTLKCFVPDYIPTLGEMDAFLKVPRPDGKADDLGFKVLDEPSAQQSDAAVLELQLRAVTKRRHGDAAVRSIEGAHKAPQEVERWVTSIAELHRTKPPPQVHYKRSMPDVDKLMEVWPEEFEQLLSTAQLPGPELEMSLEEYAKTICAIMDIPVYENIIESLHLLFTVYQEFKNNAHFAGAAASGAAPSDAFLSSSYK 254
BLAST of mRNA_P-littoralis_Contig87.193.5 vs. uniprot
Match: A0A7S2V5L8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5L8_9STRA) HSP 1 Score: 316 bits (810), Expect = 4.900e-102 Identity = 151/222 (68.02%), Postives = 191/222 (86.04%), Query Frame = 2
Query: 728 IKVEGAYDPADYAHLNVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPDNTPDELGFKVLDEPAASQSDSTVLELQLRAISKKQHG-DVAVRSIENAHKNPAEIDKWIQSINDLHRTKPPPQVNYKKNMPDIELLMEAWPPEVEEILGNVNFLTPELDISLEDYARMMCAVMDIPVY-DNIIESLHVLFTTFMEFKSNAHFMQIG 1387
+KVEGAY+ +DY HLNV EI++LFQYI RYK HEV+L+T+L+CF+PD+IPAVG+MDAFLKVPRPD+ D+LG KVLDEPAASQSD+TVLELQLRAISKKQHG DVAVRSIE A KNP EI++W++SI++LHR+ PQVNYK+NMPDIE LME WP E+EE+L + +LD+SLE+Y R++C+++DIPVY ++++ESLHVLFT +MEFK+N HFM IG
Sbjct: 46 VKVEGAYNASDYVHLNVGGEIQELFQYIQRYKPHEVELETTLKCFIPDYIPAVGEMDAFLKVPRPDDKQDDLGLKVLDEPAASQSDATVLELQLRAISKKQHGGDVAVRSIEEAAKNPQEIERWVKSISELHRSHTAPQVNYKQNMPDIEKLMEVWPDELEEMLNTIKLPGVDLDLSLEEYIRVICSILDIPVYNESVVESLHVLFTLYMEFKNNQHFMAIG 267
BLAST of mRNA_P-littoralis_Contig87.193.5 vs. uniprot
Match: F0YHZ8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHZ8_AURAN) HSP 1 Score: 315 bits (807), Expect = 4.990e-102 Identity = 146/214 (68.22%), Postives = 184/214 (85.98%), Query Frame = 2
Query: 734 VEGAYDPADYAHLNVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPDNTPDELGFKVLDEPAASQSDSTVLELQLRAISKKQHGDVAVRSIENAHKNPAEIDKWIQSINDLHRTKPPPQVNYKKNMPDIELLMEAWPPEVEEILGNVNFLTPELDISLEDYARMMCAVMDIPVYDNIIESLHVLFTTFMEFKSNAHF 1375
VEGAY+ DY+ LNVSA+++DLFQYIGRY AHEV+LD++L+CF+PD+IPAVG+MDAF+KVPRPD DELG +VLDEPAA+QSD+TVLELQLRA+SKKQHGDVA+RSIE+A KNP EI++WI+SI DLHR+KPPPQVNY+K MPDI+ LME WP E E++L V T +L+ SL + AR+ C++MDIPVYDN++ESLHVLF+ ++EF N HF
Sbjct: 31 VEGAYNAKDYSDLNVSADVRDLFQYIGRYNAHEVELDSTLKCFIPDYIPAVGEMDAFIKVPRPDGERDELGLQVLDEPAAAQSDATVLELQLRAVSKKQHGDVAIRSIEHAAKNPLEIERWIKSIEDLHRSKPPPQVNYRKAMPDIDKLMEEWPSEFEDMLRGVALPTADLECSLPELARIACSIMDIPVYDNLVESLHVLFSVYLEFSDNVHF 244
BLAST of mRNA_P-littoralis_Contig87.193.5 vs. uniprot
Match: A0A8J2SVY8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVY8_9STRA) HSP 1 Score: 317 bits (813), Expect = 1.050e-100 Identity = 147/223 (65.92%), Postives = 187/223 (83.86%), Query Frame = 2
Query: 713 ERSNPIKVEGAYDPADYAHLNVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPDNTPDELGFKVLDEPAASQSDSTVLELQLRAISKKQHGDVAVRSIENAHKNPAEIDKWIQSINDLHRTKPPPQVNYKKNMPDIELLMEAWPPEVEEILGNVNFLTPELDISLEDYARMMCAVMDIPVYDNIIESLHVLFTTFMEFKSNAHFMQ 1381
++ P +VEGAY+P DYA LNVSA+++DLFQYIGRY AHEV+L+++L+CFVPD+IPAVG+MDAFLKVPRPD D LG +VLDEPAA+QSD+TVLELQLRA+SKKQHGDVAVRSIENA KNP EID+WI+SI DLHR+KPPPQV+Y+K MPDI+ LME W PE EE+L L+++L ++A++ C ++D+PVYD+I+ESLHVLF+ ++EF N HF Q
Sbjct: 177 QKQAPTEVEGAYNPDDYADLNVSADVRDLFQYIGRYAAHEVELESTLKCFVPDYIPAVGEMDAFLKVPRPDGQKDNLGLQVLDEPAAAQSDATVLELQLRAVSKKQHGDVAVRSIENAAKNPQEIDRWIKSIEDLHRSKPPPQVHYRKAMPDIDKLMEEWEPEFEELLKTTPLPDENLEVTLAEFAKIACGLLDVPVYDSIVESLHVLFSVYLEFTENVHFQQ 399
BLAST of mRNA_P-littoralis_Contig87.193.5 vs. uniprot
Match: A0A7S2B4U7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B4U7_9STRA) HSP 1 Score: 320 bits (820), Expect = 1.710e-100 Identity = 153/216 (70.83%), Postives = 184/216 (85.19%), Query Frame = 2
Query: 728 IKVEGAYDPADYAHLNVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPDNTPDELGFKVLDEPAASQSDSTVLELQLRAISKKQHGDVAVRSIENAHKNPAEIDKWIQSINDLHRTKPPPQVNYKKNMPDIELLMEAWPPEVEEILGNVNFLTPELDISLEDYARMMCAVMDIPVYDNIIESLHVLFTTFMEFKSNAHF 1375
I+V+GAY+ D+ HL VSAEIKDLFQYI RYK HEV+LDT+L+CF+PDFIPAVG+MDAF+KVP PD DELG KVLDEP+ASQSDSTVLELQLRAISKKQHGDVAVRSIENA K+PAEI+KWI+SI DLHR+KP YKKNMPDIE LM+ WP E EE+L P++++SLE+YA+++CA+MD+PVYDN+IESLHV+F+ +MEFK N HF
Sbjct: 252 IQVDGAYNANDFKHLQVSAEIKDLFQYIQRYKPHEVELDTTLKCFIPDFIPAVGEMDAFIKVPSPDAARDELGLKVLDEPSASQSDSTVLELQLRAISKKQHGDVAVRSIENAAKSPAEIEKWIKSIEDLHRSKPSVDYQYKKNMPDIESLMQEWPEEFEEMLQKTTLPGPDMELSLEEYAKVICAMMDVPVYDNLIESLHVIFSLYMEFKDNPHF 467
BLAST of mRNA_P-littoralis_Contig87.193.5 vs. uniprot
Match: A0A1V9Z9E3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z9E3_9STRA) HSP 1 Score: 305 bits (782), Expect = 5.360e-98 Identity = 139/220 (63.18%), Postives = 180/220 (81.82%), Query Frame = 2
Query: 719 SNPIKVEGAYDPADYAHLNVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPDNTPDELGFKVLDEPAASQSDSTVLELQLRAISKKQHGDVAVRSIENAHKNPAEIDKWIQSINDLHRTKPPPQVNYKKNMPDIELLMEAWPPEVEEILGNVNFLTPELDISLEDYARMMCAVMDIPVYDNIIESLHVLFTTFMEFKSNAHFM 1378
++ I V GAY +D+AHL V+ +IK+LFQYIGR+KA E++L+T L+CF+P++IPA+G+MD FLK+PRPD D LG KVLDEP+ SQSD+TVL+LQLRA SKK+HGD+ VRSIENA KN EID+WI+SI DLHRTKPPPQV+Y K+MPDIE LM+ WP E E++L + +L++SLE Y R++CA++DIPVY N+ ESLHVLFT F+EF+SN HFM
Sbjct: 28 ASSINVPGAYKESDFAHLKVTQDIKELFQYIGRFKAQEIELETRLKCFIPEYIPAIGEMDTFLKIPRPDKEADNLGLKVLDEPSISQSDATVLDLQLRATSKKKHGDIVVRSIENAEKNVKEIDRWIKSIADLHRTKPPPQVHYSKSMPDIETLMQVWPEEFEDLLSKIQLPNADLNVSLEQYTRIICAILDIPVYKNVYESLHVLFTLFLEFRSNQHFM 247
BLAST of mRNA_P-littoralis_Contig87.193.5 vs. uniprot
Match: A0A7S2C2T6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C2T6_9STRA) HSP 1 Score: 307 bits (787), Expect = 4.020e-96 Identity = 143/216 (66.20%), Postives = 182/216 (84.26%), Query Frame = 2
Query: 728 IKVEGAYDPADYAHLNVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPDNTPDELGFKVLDEPAASQSDSTVLELQLRAISKKQHGDVAVRSIENAHKNPAEIDKWIQSINDLHRTKPPPQVNYKKNMPDIELLMEAWPPEVEEILGNVNFLTPELDISLEDYARMMCAVMDIPVYDNIIESLHVLFTTFMEFKSNAHF 1375
++ +GAY+P DY HL VSAEIKDLFQYIGRYK HEV+LD++L+CF+P++IPAVG+MDAF+KVP PD + D+LG K+LDEPAA QSD+TVLELQLRAISKKQHG+VAV SI++A KNP EID+WI+SI DLHR K +V YKKNMPDI+ LM+ WP E+EE+L P++D++LE+YAR++CAVMD+PVYDN +ESLHV+F+ +M FK N HF
Sbjct: 216 MRPDGAYNPDDYKHLPVSAEIKDLFQYIGRYKPHEVELDSTLKCFIPEYIPAVGEMDAFIKVPAPDGSQDDLGLKMLDEPAAQQSDATVLELQLRAISKKQHGEVAVHSIDHAAKNPGEIDRWIKSIADLHRQKHAVEVQYKKNMPDIDSLMQEWPEELEEMLQKTTLPGPDMDLTLEEYARVICAVMDVPVYDNSVESLHVIFSLYMAFKENPHF 431
BLAST of mRNA_P-littoralis_Contig87.193.5 vs. uniprot
Match: D0NNX2_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NNX2_PHYIT) HSP 1 Score: 306 bits (783), Expect = 6.400e-95 Identity = 141/215 (65.58%), Postives = 177/215 (82.33%), Query Frame = 2
Query: 740 GAYDPADYAHLNVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPDNTPDELGFKVLDEPAASQSDSTVLELQLRAISKKQHGDVAVRSIENAHKNPAEIDKWIQSINDLHRTKPPPQVNYKKNMPDIELLMEAWPPEVEEILGNVNFLTPELDISLEDYARMMCAVMDIPVYDNIIESLHVLFTTFMEFKSNAHFMQI 1384
G Y +DYAHL VS EI++LFQYIGR+KA E++L+T L+CF+P+FIPAVGDMDAFLKVPRPD PD+LG K+LDEP+ +QSD+TVL+LQLR+ SKK+HGD+ VRSIENA K+P EID+WI+SI DLHRTKPPPQV+Y K MPDIE LM+ WP E EE+LG +LD+ LE Y R++CA++DIPV+ N+ ESLHVLFT ++EF SN HFM +
Sbjct: 296 GGYKESDYAHLKVSHEIRELFQYIGRFKAQEIELETRLKCFIPEFIPAVGDMDAFLKVPRPDGQPDQLGLKMLDEPSLTQSDATVLDLQLRSTSKKKHGDIVVRSIENAEKSPREIDRWIKSIADLHRTKPPPQVHYTKTMPDIESLMQVWPEEFEELLGKTTLPGADLDMGLEQYVRVICALLDIPVHKNVYESLHVLFTLYLEFSSNQHFMPL 510
BLAST of mRNA_P-littoralis_Contig87.193.5 vs. uniprot
Match: A0A6A5B0A0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5B0A0_9STRA) HSP 1 Score: 297 bits (761), Expect = 1.370e-94 Identity = 134/215 (62.33%), Postives = 176/215 (81.86%), Query Frame = 2
Query: 734 VEGAYDPADYAHLNVSAEIKDLFQYIGRYKAHEVDLDTSLRCFVPDFIPAVGDMDAFLKVPRPDNTPDELGFKVLDEPAASQSDSTVLELQLRAISKKQHGDVAVRSIENAHKNPAEIDKWIQSINDLHRTKPPPQVNYKKNMPDIELLMEAWPPEVEEILGNVNFLTPELDISLEDYARMMCAVMDIPVYDNIIESLHVLFTTFMEFKSNAHFM 1378
V GAY +D+AHL V+ +I++LFQYIGR+K+ +++L+T L+CFVP++IPA+GDMD FLK+PRPDN D+LG KVLDEP +QSD+TVL+LQLRA SKK+HGD+ VRSIE+A KN EID+WI+SI DLHRTKPPPQV+Y K MPDIE LM+ WP E EE+L +LD++++ Y R++CA++DIPVY N+ ESLHVLFT ++EF+SN HFM
Sbjct: 44 VPGAYKESDFAHLKVTQDIRELFQYIGRFKSQDIELETRLKCFVPEYIPAIGDMDTFLKIPRPDNEADQLGLKVLDEPTIAQSDATVLDLQLRATSKKKHGDIVVRSIEHAEKNVKEIDRWIKSIADLHRTKPPPQVHYTKTMPDIETLMQVWPDEFEELLAKTQLPHADLDVTVDQYTRVICAILDIPVYKNVYESLHVLFTLYLEFRSNQHFM 258 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig87.193.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig87.193.5 >prot_P-littoralis_Contig87.193.5 ID=prot_P-littoralis_Contig87.193.5|Name=mRNA_P-littoralis_Contig87.193.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=461bp MADPREFSDDDSEDSGFEESVGPTDRKKEQRLENDKYDMALEVSASASMDback to top mRNA from alignment at P-littoralis_Contig87:389556..396885- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig87.193.5 ID=mRNA_P-littoralis_Contig87.193.5|Name=mRNA_P-littoralis_Contig87.193.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=7330bp|location=Sequence derived from alignment at P-littoralis_Contig87:389556..396885- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig87:389556..396885- >mRNA_P-littoralis_Contig87.193.5 ID=mRNA_P-littoralis_Contig87.193.5|Name=mRNA_P-littoralis_Contig87.193.5|organism=Pylaiella littoralis U1_48|type=CDS|length=1383bp|location=Sequence derived from alignment at P-littoralis_Contig87:389556..396885- (Pylaiella littoralis U1_48)back to top |