mRNA_P-littoralis_Contig87.185.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig87.185.4
Unique NamemRNA_P-littoralis_Contig87.185.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig87.185.4 vs. uniprot
Match: D7G924_ECTSI (UPF0020 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G924_ECTSI)

HSP 1 Score: 639 bits (1648), Expect = 9.470e-222
Identity = 358/560 (63.93%), Postives = 398/560 (71.07%), Query Frame = 1
Query:  154 NALSTTNARSLRLCAFRGRSRHTSGFEPFETFELAPQEFIASAQPTGLEEHD--IHLKPTRGSSVFQWIHSSMGDAELAEAASRCVLLHGLFEVWGHGRNQEEAAKDASRSGRFL-HSVDASWSVGVTSYGRSNLKKVEQQAIAGGSVEEFLSTSLNGRRTESLNSDIRIRIIEDTCPPPAVNLPPDVRERAEAEAAAAGKSRENRFYICRELQVGAAVSEGGTAMSTSCGRRPIRGVLGALALNLRRCCGPTAIEPEVAIVMANLAKVRLGSLILDPFCGSCSLLLPAASMGAEVWGSDVAGPATVAPLHTVGQAREQLDDAMAAGCKTNEQADREGLNNMYQDFGELGLAPPTLVAADVSNEESRVRRPEFYDAIITDPPYNIKVKVITNTDARSREKINPTILSRGTEEASTGSESRSSAFPVARPDSMVGFQQMQQKEADEGGGGGCADYKGTEWKAGDGARAEACANDLVGEVVWSLLSLARYSLKPGGRLCFFLPLRGAEARLVSLPTALLEGLSAGDNDAGGAGANRLLAVYATKQRMTSPNMCRWLVVMEKE 1824
            NALS +  RSLRL AFRGRSRHTSGF P+E FELAPQE IAS   T   E    + L+ T GS VFQW+ S M DAE+AEAASRCVLLHGLFEVWGHGRN+E+A +DA +SGRFL H+ +ASWS+GVT YGRSNL K EQQA+AGG VE FLS+ L G R E +NSDIR+RIIED CPPPA NLP DVRERAEA AAA  + REN FYICRELQ+GAAV  GGT M+T CGRRP RGVLGALALN RRC GPTAIEPEVA++MANLAKVR GS +LDPFCGSCSLLLPAA MGA+ WGSDV+GPAT +       A    D     G +   QADRE    +YQDF  LG+A PTLVAADV +EES VRRPEFYDAI+TDPPYNIK KV+T + A                  S   E   S  P A  DS                    A   G+EWKAG GARAEA A DLVG+V+WSLL+LAR SLKPGGRLCFFLPLRGAEARL  LPT LLE +S GD     A   RL  VY TKQRMTSPNMCRWL+V+EKE
Sbjct:   12 NALSAST-RSLRLVAFRGRSRHTSGFGPYEKFELAPQELIASTTQTKRSEQQDMLRLRQTDGSDVFQWVDSRMDDAEIAEAASRCVLLHGLFEVWGHGRNREDAIRDAFKSGRFLQHAGNASWSLGVTRYGRSNLNKEEQQALAGGPVETFLSSFLKGPRIELVNSDIRVRIIEDLCPPPAENLPRDVRERAEASAAAR-RRRENTFYICRELQLGAAVGVGGTVMATGCGRRPTRGVLGALALNRRRCRGPTAIEPEVALIMANLAKVRPGSRVLDPFCGSCSLLLPAAHMGAKTWGSDVSGPATASEE---AGALVGGDTGAEGGVR---QADREDFEQIYQDFQALGVAAPTLVAADVGDEESPVRRPEFYDAIVTDPPYNIKAKVVTTSLATK---------------TSGRHEEAGSVLPAAGIDSTAH----------------AASEAGSEWKAGGGARAEASAKDLVGKVIWSLLALARSSLKPGGRLCFFLPLRGAEARLDRLPTGLLEKMSQGDLAGDPA---RLAVVYTTKQRMTSPNMCRWLIVLEKE 529          
BLAST of mRNA_P-littoralis_Contig87.185.4 vs. uniprot
Match: A0A7S4NQG6_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NQG6_GUITH)

HSP 1 Score: 95.5 bits (236), Expect = 3.120e-18
Identity = 65/193 (33.68%), Postives = 99/193 (51.30%), Query Frame = 1
Query:  781 LQVGAAVSEGGTAMSTSCGRRPIRGVLGALALNLRRCCGPTAIEPEVAIVMANLAKVRLGSLILDPFCGSCSLLLPAASM---GAEVWGSDVAGPATVAPLHTVGQAREQLDDAMAAGCKTNEQADREGLNNMYQDFGELGLAPPTLVAADVSN--EESRVRRPEFYDAIITDPPYNIKVKVITNTDARSREK 1344
            LQ G+AV +          RRP  G+L   + N R+    TA+EPE++++MAN+AK+R  +++LDPFCGSCSLLL A  +     +++G D                     D    G           L  +  DF    +APPT+  A +    ++S  RR +F +AIITDPPY++  +++ + D RSR+K
Sbjct:   86 LQRGSAVGDEDLYNIAGSRRRPRAGILRTFSNNERKFKTATAMEPEISLLMANVAKIREDAIVLDPFCGSCSLLLAAGIILRGRCQLYGYDA--------------------DGEIMGM----------LEKISSDFAHHSIAPPTIRRAGIETLGQDSDFRRLKF-NAIITDPPYDMNAQILESEDKRSRKK 247          
BLAST of mRNA_P-littoralis_Contig87.185.4 vs. uniprot
Match: A0A0M0JC63_9EUKA (tRNA (Guanine-n2)-methyltransferase-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JC63_9EUKA)

HSP 1 Score: 99.0 bits (245), Expect = 7.710e-18
Identity = 97/345 (28.12%), Postives = 146/345 (42.32%), Query Frame = 1
Query:  370 DAELAEAASRCVLLHGLFEVWGHGRNQEEAAK-----DASRSGRFLHSVDASWSVGVTSYGRSNLKKVEQQAIAGGSVEEFLSTSLNGRRTESLNSDIRIRIIEDTCPPPAVNLPPDVRERAEAEAAAAGKSRENRFYICRELQVGAAVSEGGTAMSTSCGRRPIRGVLGALALNLRRCCGPTAIEPEVAIVMANLAKVRLGSLILDPFCGSCSLLLPAASMGAEVWGSDVAGPATVAPLHTVGQAREQLDDAMAAGCKTNEQADREGLNNMYQDFGELGLAPPT-LVAADVSNEESRVRRPE--FYDAIITDPPYNIKVKVITNTDARSREKINPTILSRGTEE 1380
            D  +   A R VL+  + E WG GR+ +E A       A RS  FL +   ++ + VT+ GR  L++  QQ I    +E  L+   + R  +    D+   +  DT   P++                  K  E         + G  +++G             R ++    L  R   G T+++PE+++VMANLA++R   L+ DP+CG+   L+ AA+ GA V G D+ GPA    L T     +Q  DA   G                + F   GL PP  L+  D     + +R      +DAIITDPPY I+ K     D +        +LSR  EE
Sbjct:   72 DEAVRRLAGRAVLVKNITEEWGSGRDWDEFAAALRAFPAERSAPFL-AAGITFKINVTTLGRRLLEEERQQLIK--QLEPLLAFRGSVRMRDP---DVTFVLFVDT---PSM------------------KGEEGCTSTTARYRFGRWIADGR------------RDLVHKYDLKTRNYIGTTSLDPELSLVMANLARLRQHDLVYDPYCGTAGTLVAAAAFGARVLGCDLHGPAIRGQLRTRSGPGKQSWDAAVQGIP--------------ETFAAYGLLPPVALIQGDSGAHLAFLRAVPGGLFDAIITDPPYGIREKPAEVADEK--------LLSRAIEE 355          
BLAST of mRNA_P-littoralis_Contig87.185.4 vs. uniprot
Match: M4C615_HYAAE (UPF0020 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C615_HYAAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.670e-17
Identity = 88/312 (28.21%), Postives = 139/312 (44.55%), Query Frame = 1
Query:  391 ASRCVLLHGLFEVWGH----GRNQEEAAKDASRSG----RFLHSVDASWSVGVTSYGRSNLKKVEQQAIAGGSVEEFLSTSLNGRRTESLNSDIRIRIIEDTCPPPAVNLPPDVRERAEAEAAAAGKSRENRFYICRELQVGAAVSEGGTAMSTSCGRRPIRGVLGALALNLRRCCGPTAIEPEVAIVMANLAKVRLGSLILDPFCGSCSLLLPAASMGAEVWGSDVAGPATVAPLHTVGQAREQLDDAMAAGCKTNEQADREGLNNMYQDFGELGLAPPTLVAADVSNEESRVRRPEFYDAIITDPPYNIK 1302
            + R +L+ G++EVWGH    G   E  A   S  G          + SW + V+ +G+  L   EQQ       E F          +   SD    I+E+       NL PDV+ +              + +  REL    A SE       + GR   R ++    L  R   GPT++E E+A++M+N+A  + G L++DPF G+ S+L+P  + GA  +G+D+     +  L   G     +    A    T E +D +   N+  +F +  L  P L+ AD S+    V+   F+DA++ DPPY I+
Sbjct:   68 SERGILVKGVYEVWGHTTSGGGYDELVASVESYKGVQKQELFKDEERSWRINVSVFGKK-LSMDEQQKRR----ERFRDVLPFAGPVQMKRSDETFLILEELYLDQ--NLAPDVKPK--------------QIFFLREL----AGSE------KNRGRGGARDLVDQQTLKRRAYIGPTSMESEMALLMSNMALTQPGDLVIDPFVGTGSVLIPCGTHGAMCYGTDI----DIRVLLGTG-----VGVTGAGAVLTEELSDGKARVNVVTNFKQYSLPLPELIRADNSDSPLVVKCRGFFDAVVCDPPYGIR 339          
BLAST of mRNA_P-littoralis_Contig87.185.4 vs. uniprot
Match: A0A0G4HHF0_9ALVE (UPF0020 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HHF0_9ALVE)

HSP 1 Score: 97.4 bits (241), Expect = 2.360e-17
Identity = 93/314 (29.62%), Postives = 133/314 (42.36%), Query Frame = 1
Query:  379 LAEAASRCVLLHGLFEVWGHGRNQEEAAKDASRSGRFLHSVDA---SWSVGVTSYGRSNLKKVEQQAIAGGSVEEFLSTSLNGRRTESLNSDIRIRIIEDTCPPPAVNLPPDVRERAEAEAAAAGKSRENRFYICRELQVGAAVSEGGTAMSTSCGRRPIRGVLGALA----LNLRRCCGPTAIEPEVAIVMANLAKVRLGSLILDPFCGSCSLLLPAASMGAEVWGSDVAGPATVAPLHTVGQAREQLDDAMAAGCKTNEQADREGLNNMYQDFGELGLAPPTLVAADVSNEESRVRRPEFYDAIITDPPYNI 1299
            L +   RCVL+   FE WG G +  EA K  S    FL S +    SW+      G   +++ + +++ G    E L     G   E    ++ + I+E+                               F   RE Q+   + EG  A+    GRR   G  G L     L  R     T + P+V+ +MANL  V  G+ +LDPFCGSCSLLLP A  GAE +G D      +         ++Q+ +A   G + +  A   GL  +  +F E GL  P L  A +      V    F+DAI+TDPPY +
Sbjct:  206 LRDVLGRCVLIESGFEAWGWGGSHSEAVK-RSADRAFLISEEQKKKSWAARCRVIG---VRRRDPRSVLG-LYRETLKRLEGGVDLEK--PELEVTILEE-------------------------------FTRGREKQI---LGEGLKAVMI--GRRLAVGGGGGLPDKFNLRSRPYVSLTTMNPDVSFLMANLGGVVRGNRVLDPFCGSCSLLLPCAYFGAETFGLDADDSVLLGLASARRDQQKQIREAQEKGMRGS--ASSIGLPEISSNFVEKGLPVPRLFHAPIDKPPPEVAE-TFFDAIVTDPPYGL 473          
BLAST of mRNA_P-littoralis_Contig87.185.4 vs. uniprot
Match: A0A329RQ85_9STRA (UPF0020 domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A329RQ85_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 7.260e-17
Identity = 94/347 (27.09%), Postives = 156/347 (44.96%), Query Frame = 1
Query:  289 TGLEEHDIHLKPTRGSSVFQWIHSSMGDAELAEAAS-RCVLLHGLFEVWGH---GRNQEEAAKDAS-----RSGRFLHSVDASWSVGVTSYGRSNLKKVEQQAIAGGSVEEFLSTSLNGRRTESLNSDIRIRIIEDTCPPPAVNLPPDVRERAEAEAAAAGKSRENRFYICRELQVGAAVSEGGTAMSTSCGRRPIRGVLGALALNLRRCCGPTAIEPEVAIVMANLAKVRLGSLILDPFCGSCSLLLPAASMGAEVWGSDVAGPATVAPLHTVGQAREQLDDAMAAGCKTNEQADREGLNNMYQDFGELGLAPPTLVAADVSNEESRVRRPEFYDAIITDPPYNIK 1302
            T L++ +    P   SS    +H  +  A+ A+  S R +L+ G++EVWGH   G   +E  K        +  R L     SW + V+ +G+  L   EQ+       E+F          +  N D    ++E+      + L  D+    + +          + +  REL    A SE       + GR   R ++    L  R   GPT++E E+A++M N+A V+ G L++DPF G+ S+L+P  + GA  +G+D+     +  L   G     +    A    T+E++D +   N+  +F + GL  P LV AD S      +   F+DA++ DPPY I+
Sbjct:   35 TVLKDPETRKLPEPESSPLVRVH--LPSAKHAKFLSERGILVKGVYEVWGHTSSGGGYDELVKSVEAFQGPQKQRILQDDKRSWRINVSVFGKK-LSMDEQRERR----EKFRDGLPFAGPVQMKNPDETFLVLEE------LGLDQDLHPGMKPK----------QIFFLREL----AGSE------KNRGRGGARDLVDQQTLKRRAYIGPTSMESEMALLMCNMALVQPGDLVVDPFVGTGSVLIPCGTHGAMCYGTDI----DIRVLLGTG-----VGVTGAGVVVTDEKSDGKERVNVITNFKQYGLPLPELVRADNSMSPLVKQCEGFFDAVVCDPPYGIR 339          
BLAST of mRNA_P-littoralis_Contig87.185.4 vs. uniprot
Match: A0A2D4BRW7_PYTIN (tRNA guanosine-2'-O-methyltransferase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRW7_PYTIN)

HSP 1 Score: 95.1 bits (235), Expect = 8.470e-17
Identity = 86/311 (27.65%), Postives = 139/311 (44.69%), Query Frame = 1
Query:  391 ASRCVLLHGLFEVWGHGRNQEEAAKDASRSG-------RFLHSVDASWSVGVTSYGRSNLKKVEQQAIAGGSVEEFLSTSLNGRRTESLNSDIRIRIIEDTCPPPAVNLPPDVRERAEAEAAAAGKSRENRFYICRELQVGAAVSEGGTAMSTSCGRRPIRGVLGALALNLRRCCGPTAIEPEVAIVMANLAKVRLGSLILDPFCGSCSLLLPAASMGAEVWGSDVAGPATVAPLHTVGQAREQLDDAMAAGCKTNEQADREGLNNMYQDFGELGLAPPTLVAADVSNEESRVRRPEFYDAIITDPPYNIK 1302
            ++R +L+ G++EVWGH +  + AA   +  G       R L     SW + V ++G+  L   EQ++      E F          +      ++ I+E+     A+ LP D+   A  +            +  REL    A SE       + GR   R ++    L  R   GPT++E E+A++MAN+A V+ G +++DPF G+ S+L+P A+ GA  +G+D+     +  L                       +DR    N+  +F + GL  P LV AD S      R   F+DA++ DPPY I+
Sbjct:   95 SARAILVKGVYEVWGHVQGADYAALVRAVDGYAGAAKARILRDEACSWCINVEAFGKK-LTMEEQESRR----ERFRDVLPFAGPVQMKQPHEKLLILEEF----ALELP-DLATAAPQQ-----------LFFLREL----AGSE------RNRGRGGARDLIDRQTLKRRAYIGPTSMESEMALLMANMALVQRGDVVIDPFVGTGSVLIPCATHGAVCFGTDI----DIRVLLGTXXXXXXXXXXXXXXXXXXXXSDRV---NVVSNFEQYGLPLPELVRADNSLNPLVTRCRGFFDAVVCDPPYGIR 367          
BLAST of mRNA_P-littoralis_Contig87.185.4 vs. uniprot
Match: A0A397C1R4_9STRA (UPF0020 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C1R4_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.340e-16
Identity = 82/307 (26.71%), Postives = 132/307 (43.00%), Query Frame = 1
Query:  391 ASRCVLLHGLFEVWGHGRNQE---EAAKDASRSGRFLHSVDASWSVGVTSYGRSNLKKVEQQAIAGGSVEEFLSTSLNGRRTESLNSDIRIRIIEDTCPPPAVNLPPDVRERAEAEAAAAGKSRENRFYICRELQVGAAVSEGGTAMSTSCGRRPIRGVLGALALNLRRCCGPTAIEPEVAIVMANLAKVRLGSLILDPFCGSCSLLLPAASMGAEVWGSDVAGPATVAPLHTVGQAREQLDDAMAAGCKTNEQADREGLNNMYQDFGELGLAPPTLVAADVSNEESRVRRPEFYDAIITDPPYNIK 1302
            + R +L+ G++EVWGHG       E+    +     +     SW + V ++G   L   EQ A      E F          E  N  +   I+ED            V ++         K+  +R +  R L  G            + GR   R ++ A  L  R   GPT+++ E+A++M N+A V+ GSL++DPF G+ S+L+P  + G   +G+D+        LH  G+A + +        K+N              F +  L  P L+ AD  N  S +R P ++DA++ DPPY I+
Sbjct:   50 SQRGILVKGVYEVWGHGHTYAALVESVDAFAEKDTVVSDASLSWKIQVDAFGLK-LSMEEQTARR----ENFRHVLPFAGPVEMKNPALTFLILEDI----------GVDQQ---------KTTPDRIFFLRALAGG----------EKNRGRGGARDLVDAQTLKRREYIGPTSMDAEMALIMCNMALVQPGSLVIDPFVGTGSVLVPCTTFGGICFGTDIDSRV----LH--GKAGKSI--------KSN--------------FDQYKLRVPDLIRAD--NSRSPLRCPHYFDAVVCDPPYGIR 292          
BLAST of mRNA_P-littoralis_Contig87.185.4 vs. uniprot
Match: T0SIC9_SAPDV (UPF0020 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SIC9_SAPDV)

HSP 1 Score: 94.0 bits (232), Expect = 1.460e-16
Identity = 85/308 (27.60%), Postives = 129/308 (41.88%), Query Frame = 1
Query:  391 ASRCVLLHGLFEVWGHGRNQEEA-AKDASRSGRFLHSVDAS--WSVGVTSYGRSNLK-KVEQQAIAGGSVEEFLSTSLNGRRTESLNSDIRIRIIEDTCPPPAVNLPPDVRERAEAEAAAAGKSRENRFYICRELQVGAAVSEGGTAMSTSCGRRPIRGVLGALALNLRRCCGPTAIEPEVAIVMANLAKVRLGSLILDPFCGSCSLLLPAASMGAEVWGSDVAGPATVAPLHTVGQAREQLDDAMAAGCKTNEQADREGLNNMYQDFGELGLAPPTLVAADVSNEESRVRRPEFYDAIITDPPYNIK 1302
            + R +L+ G++E+WGHG+  +E  A  A+   R  +  DAS  W + V ++G   LK  +EQQ        E L     G    S N      I+ED     A   P                    R +  R L               + GR   R ++    L  R   GPT+++ E+A++M N+A V  G L++DPF G+ S+L+P A+ G    G+D+                    D      K N+         +Y +F +  L  P LV AD  N  S +R P ++DA++ DPPY I+
Sbjct:   61 SQRGILVKGVYEIWGHGKTYDEVVASVAAFEERTTYVEDASLSWKINVDAFG---LKLSMEQQTARRERFREILP--FQGPVVLS-NPSNTFLILEDIGVDEAAMTP-------------------QRIFFLRTL----------AGAERNRGRGGARDLVDMQTLKRRAYIGPTSMDAEMALLMCNMALVMPGDLVIDPFVGTGSVLVPCATFGGICMGTDI--------------------DTRVLHGKNNK--------TIYSNFHQYDLPVPELVRAD--NSRSPLRCPMYFDAVVCDPPYGIR 303          
BLAST of mRNA_P-littoralis_Contig87.185.4 vs. uniprot
Match: A0A485LET3_9STRA (Aste57867_20285 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LET3_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.480e-16
Identity = 81/321 (25.23%), Postives = 134/321 (41.74%), Query Frame = 1
Query:  352 IHSSMGDAELAEAAS-RCVLLHGLFEVWGHGRNQEEAAKDAS---RSGRFLHSVDASWSVGVTSYGRSNLKKVEQQAIAGGSVEEFLSTSLNGRRTESLNSDIRIRIIEDTCPPPAVNLPPDVRERAEAEAAAAGKSRENRFYICRELQVGAAVSEGGTAMSTSCGRRPIRGVLGALALNLRRCCGPTAIEPEVAIVMANLAKVRLGSLILDPFCGSCSLLLPAASMGAEVWGSDVAGPATVAPLHTVGQAREQLDDAMAAGCKTNEQADREGLNNMYQDFGELGLAPPTLVAADVSNEESRVRRPEFYDAIITDPPYNIK 1302
            +H  +   E A+  S R +L+ G++E+WGHG   +E  +           ++    SW + V ++G   LK    + +A    E+F          +  N  +   I+ED     A   P                   +R +  R L  G            + GR   R ++ A  L  R   GPT+++ E+A++M N+A V+ G L++DPF G+ S+L+P  + G    G+D+                   D  +  G       D+  ++N +Q      L  P LV AD  N  S +R P ++DA++ DPPY I+
Sbjct:   47 VHVKLPSEEHAKFLSQRGILVKGVYEMWGHGTTYDELVQSVDTFQEKDVLVNDPTQSWKINVDAFG---LKLSMDEQVAR--REKFRPVLPFAGPVQMKNPSLTFLILEDIGVDQATTTP-------------------DRIFFLRALAGG----------EKNRGRGGARDLVDAQTLKRRAYIGPTSMDAEMALIMCNMALVQPGDLVIDPFVGTGSVLVPCTTFGGICMGTDI-------------------DSRVLHGKN-----DKTIISNFHQ----YNLRVPDLVRAD--NSRSPLRCPNYFDAVVCDPPYGIR 303          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig87.185.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G924_ECTSI9.470e-22263.93UPF0020 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S4NQG6_GUITH3.120e-1833.68Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A0M0JC63_9EUKA7.710e-1828.12tRNA (Guanine-n2)-methyltransferase-like protein n... [more]
M4C615_HYAAE1.670e-1728.21UPF0020 domain-containing protein n=1 Tax=Hyaloper... [more]
A0A0G4HHF0_9ALVE2.360e-1729.62UPF0020 domain-containing protein n=1 Tax=Chromera... [more]
A0A329RQ85_9STRA7.260e-1727.09UPF0020 domain-containing protein n=11 Tax=Phytoph... [more]
A0A2D4BRW7_PYTIN8.470e-1727.65tRNA guanosine-2'-O-methyltransferase, putative n=... [more]
A0A397C1R4_9STRA1.340e-1626.71UPF0020 domain-containing protein n=1 Tax=Aphanomy... [more]
T0SIC9_SAPDV1.460e-1627.60UPF0020 domain-containing protein n=1 Tax=Saproleg... [more]
A0A485LET3_9STRA1.480e-1625.23Aste57867_20285 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig87contigP-littoralis_Contig87:366449..370940 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G924
PFAMsAnk_2,UPF0020
Model size2115
Max annot lvl2759|Eukaryota
KEGG koko:K03178
KEGG Pathwayko04120,ko05012,map04120,map05012
Hectar predicted targeting categoryother localisation
Exons7
Evalue4.78e-224
EggNOG OGsCOG1041@1|root,KOG2671@2759|Eukaryota
Ec32 ortholog descriptionRNA methylase
Ec32 orthologEc-15_002170.1
EC6.2.1.45
DescriptiontRNA binding
Cds size1794
COG categoryL
BRITEko00000,ko00001,ko01000,ko04121,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791746.7932503-UTR-P-littoralis_Contig87:366448..3664871680791746.7932503-UTR-P-littoralis_Contig87:366448..366487Pylaiella littoralis U1_48UTRP-littoralis_Contig87 366449..366487 +
1680791746.8943632-UTR-P-littoralis_Contig87:370658..3709401680791746.8943632-UTR-P-littoralis_Contig87:370658..370940Pylaiella littoralis U1_48UTRP-littoralis_Contig87 370659..370940 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791746.8074841-CDS-P-littoralis_Contig87:366487..3666511680791746.8074841-CDS-P-littoralis_Contig87:366487..366651Pylaiella littoralis U1_48CDSP-littoralis_Contig87 366488..366651 +
1680791746.8179817-CDS-P-littoralis_Contig87:366896..3670911680791746.8179817-CDS-P-littoralis_Contig87:366896..367091Pylaiella littoralis U1_48CDSP-littoralis_Contig87 366897..367091 +
1680791746.832472-CDS-P-littoralis_Contig87:367473..3675511680791746.832472-CDS-P-littoralis_Contig87:367473..367551Pylaiella littoralis U1_48CDSP-littoralis_Contig87 367474..367551 +
1680791746.8440034-CDS-P-littoralis_Contig87:368025..3681721680791746.8440034-CDS-P-littoralis_Contig87:368025..368172Pylaiella littoralis U1_48CDSP-littoralis_Contig87 368026..368172 +
1680791746.8542767-CDS-P-littoralis_Contig87:368587..3689121680791746.8542767-CDS-P-littoralis_Contig87:368587..368912Pylaiella littoralis U1_48CDSP-littoralis_Contig87 368588..368912 +
1680791746.863556-CDS-P-littoralis_Contig87:369434..3697451680791746.863556-CDS-P-littoralis_Contig87:369434..369745Pylaiella littoralis U1_48CDSP-littoralis_Contig87 369435..369745 +
1680791746.8784328-CDS-P-littoralis_Contig87:370084..3706581680791746.8784328-CDS-P-littoralis_Contig87:370084..370658Pylaiella littoralis U1_48CDSP-littoralis_Contig87 370085..370658 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig87.185.4prot_P-littoralis_Contig87.185.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig87 366488..370658 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig87.185.4

>prot_P-littoralis_Contig87.185.4 ID=prot_P-littoralis_Contig87.185.4|Name=mRNA_P-littoralis_Contig87.185.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=598bp
MQTTIFELDSTCPAAQVWMRGVKPRSLLLSCCIILRESNALSTTNARSLR
LCAFRGRSRHTSGFEPFETFELAPQEFIASAQPTGLEEHDIHLKPTRGSS
VFQWIHSSMGDAELAEAASRCVLLHGLFEVWGHGRNQEEAAKDASRSGRF
LHSVDASWSVGVTSYGRSNLKKVEQQAIAGGSVEEFLSTSLNGRRTESLN
SDIRIRIIEDTCPPPAVNLPPDVRERAEAEAAAAGKSRENRFYICRELQV
GAAVSEGGTAMSTSCGRRPIRGVLGALALNLRRCCGPTAIEPEVAIVMAN
LAKVRLGSLILDPFCGSCSLLLPAASMGAEVWGSDVAGPATVAPLHTVGQ
AREQLDDAMAAGCKTNEQADREGLNNMYQDFGELGLAPPTLVAADVSNEE
SRVRRPEFYDAIITDPPYNIKVKVITNTDARSREKINPTILSRGTEEAST
GSESRSSAFPVARPDSMVGFQQMQQKEADEGGGGGCADYKGTEWKAGDGA
RAEACANDLVGEVVWSLLSLARYSLKPGGRLCFFLPLRGAEARLVSLPTA
LLEGLSAGDNDAGGAGANRLLAVYATKQRMTSPNMCRWLVVMEKERQ*
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mRNA from alignment at P-littoralis_Contig87:366449..370940+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig87.185.4 ID=mRNA_P-littoralis_Contig87.185.4|Name=mRNA_P-littoralis_Contig87.185.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=4492bp|location=Sequence derived from alignment at P-littoralis_Contig87:366449..370940+ (Pylaiella littoralis U1_48)
TATTTATCTCTCTCGCCATCAGTGCGCGCTCCATGTTGGATGCAAACGAC AATCTTTGAACTTGACAGTACGTGTCCTGCAGCGCAAGTTTGGATGAGAG GTGTCAAACCGAGAAGCCTTCTGTTGTCCTGCTGCATCATCTTGCGGGAG AGCAATGCGTTGTCCACCACCAACGCACGATCTCTGAGACTGTGTGCTTT CAGGTACTCTCTACATTCACCGTTCTTCTCCTAAACCCGATACCTTGGAC GATGTCGTGGCATGAAATGGGGCACCTTTTGCGATGTACCAGTACTAATC AGTCTTGACAGCACACACACCAGTCCAGCTTCAAGGAGTAGACGAAAGCA ACAGCAGCATCGATTCGTATTCCACTACTGCTGCTGCACATAAAACACTC GCAACACGGGGATGAGAAGCTTGGTTGTACCTTTTTGGATGTCCACAGGG GAAGATCGCGACACACCAGCGGTTTTGAACCGTTCGAGACATTCGAGTTG GCACCACAAGAGTTCATCGCTTCGGCCCAACCGACAGGTTTGGAGGAACA CGATATCCATCTAAAACCAACCAGAGGCTCCTCTGTATTTCAGTGGATAC ATTCTTCCATGGGGGATGCGGAGCTTGCGGAGGCAGCCTCAAGGTGCGCA CTACGGTTCTCGTTCCAAACCTCAAGACGAACCACTTTGACGAAACCCGG ATATTGCTGCATCGCGCATACCTTTCTTCGATTGTTCCTTGGTTCTCGTG CTGAAAATATGTGTTGGGCTCCGCCACCCCGACTTTCTGCTGTTGCCAAA AAAGTTACGGATCAGATATTGATTTACTACCGATCAACCCGAAAGCAGCC ATTGCTGCAATGCTCAGCGGCATCGCAGATTCAGGCCTAGTATGAGAGTG TCACGTGTGACGGCGTTTGTTTGCCCACGTGCGGTTATTGATTTTTTTGC GAAGAGAGAGGTGGTGATTGTTTGGAATCATAGAAAGAACGGTTCCCTTT ACCACACGACACGGACTAACCACAGGTGTGTTTTGCTTCATGGGCTGTTC GAGGTGTGGGGGCATGGCCGGAACCAGGAGGAAGCTGCCAAGGATGCATC CAGGTAGGGGACGGGTATGGGCTGCACGTGCCGTATACGATGGTGTATAC TGGAAGTACCATGTAGCAAACCCCGCGTACCTCTTGTCAAAGCTCGATGT CTCATCAGCAGGAATATTGCCTGTGCCGGAGTAGGGTGACGCTTTCCGAA ACAAAACGTTTCGTATTGATATAATTTATGTTGCGGAGTCATCGAGCTAT AAAAATCAGACCAAAAGGAGGATGGCTTTCACCGTCTCATTCGTATCATG TGCGGTGGGGAGGTACCGGTAAGTATAGGCACTTCGAAGTAGATCGCCAA CAGACCTATTAGCGCAGCTCTAAATTCGCGTTACCGTGGACGTTCCGGCC TGTGCTCGGCTGTGAATCCACATGGCCGTCTGCGTTTGAAGCCTGGTTTC CACAACTTTTGTGCTGTTTCAGCAAGTAGAGCTCATTTCTTACACCGGGA ATTTCGTTATTTCTTACGAGATTTCAGGTCAGGGCGCTTTCTTCACTCGG TTGACGCGTCCTGGTCGGTAGGTGTGACCAGCTACGGCCGCTCAAATCTG AAAAAAGTAGAACAACAAGCGATCGCTGGAGGATCCGTGGAGGAGTTTCT GTCCACGTCCCTGAATGGTCGAAGGTACTTACGCTTGAAAGTGGTATGGC GCAGCTTCGGAGGAAGGCTCGTGTTTTTCTCTTATGCTATTCTCGAGCTA CTCGCCATCGTTTGCTTCATGTCCCCACAACAAAGAGCCTTGTTGTAAAG TTCGGTTCAAAGTCTTCCAAGTGAGGCTGATTGATTTGTAATAAATATAT ACGAAGTGTAAATGATGTGCTCGCCGATGCGTTTCGTCTGCGCGGCGCCT TATTTTTTCGGCTGTCCGGGTTGCGTAGGATAACTTGCGTACCAATGGTA TCCCACCAACAAAATTTCGTTCCCCTCAATAAAAAAAACAACGTTTTTTG TGCTGTCTCAAAAGTGCTTGTGTTGTATACTGACCCCAGATCCGATCGCT ACCACGCCCGGCGCCCTGTACGGCCATGACTCCGAACAGGACCGAATCGC TCAACAGCGACATCCGCATTCGAATAATAGAGGACACTTGTCCACCTCCG GCCGTAAACTTACCGCCAGATGTGCGAGAACGCGCCGAGGCGGAAGCAGC TGCTGCAGGAAAGAGTAGAGAGAACAGGTTTTATATATGCCGCGAACTTC AAGTCGGCGCTGCGGTCAGCGAGGGCGGAACAGCTATGTCGACGTCGTGC GGCAGGCGTCCAATAAGGGGTGTGCTTGGCGCCTTGGCTCTCAACCTCCG AAGGTGTTGCGGGCCCACGGCGATTGAGCCCGAAGTGGCGATTGTCATGG CCAACCTAGCGAAGGTGGGGTTATTGTCAGTTGGCGTTGACGGCTGTTGG CGGCACATCTGATGAACGTGATGCTTGCGATTGTAAGGGAAGATAGTGTA TTGGACCATGTCAGATGTTGTGCGTGCATGACGACAGCATTGGATTACAA AGCTTGGCCACGTGTGGTTTTAGCGGGGGGACCAAGCAACAACGGCGCCC ATCTCCCAAACAAATCGCGGCAGAAAAATTGATGGGAAAGAGTGTGTGAC AATATCCCCTGGCCGGATATCATACACTGCGTGCTGATCTACTTGGTTTC AAGCCGATGTCACGACAACATACGTAGTGCTTTTGTAACGACGAACTTTG CGGTACGCATCAGCCCCATGTTCGTACCGTAGGTAGACCAACACAACAGC CGCGGCGACGAACACCCCGTCTCGAAATATTGAAATATGGGCAAGATGTC GTTGCACAACAACGAAGAGTTATGACGATTCACATGCATTGTACCCTCTC CTTCCCCAACACCATTCTATCCAACACGTTCCATAGGTGCGGCTGGGGTC GCTCATATTGGACCCTTTCTGTGGTTCATGCTCTCTTCTCCTGCCGGCGG CAAGCATGGGTGCCGAAGTGTGGGGTTCAGACGTGGCTGGTCCGGCTACT GTGGCCCCACTTCACACAGTTGGACAGGCTAGAGAACAGTTAGATGACGC CATGGCTGCGGGATGCAAGACAAATGAACAAGCCGACAGAGAAGGCTTAA ATAACATGTACCAGGACTTCGGAGAGCTGGGTCTCGCCCCTCCTACGCTT GTGGCGGCGGATGTGAGCAACGAAGAATCTCGTGTCCGGAGACCTGAGTA AGTTATTGGTAGTGCAAGGTGTCCTTTTGTATAACTTGGGAGCGACGAGG ATGGTTTGAGCGTCATTGTATACCGTCAGTTCAGTTTGAATCACCAGATC AGAGTCTCCGGCCCTTGTGTTGCACGCTGATGGTTCAAAATCGCGTAGAG AAGAAACGTTTCATCGCACCTCCCATGCTATTCTTAGACTTAACCCTCGC ATTGAGAATATCTCAAGAAAAAATTGCTGACATCGCGGTGTTGTTGGCGT TGTTAGGCTCTCTACTTTCCGGTGACTGAAGTGGTACCCTGCCGACCCCT ACACTGCTTTCTCCGTCCCTCGGCGCCACCCAAAAGGTTTTACGACGCAA TAATCACGGACCCACCCTACAACATCAAAGTCAAGGTTATCACCAACACC GACGCTCGTAGCCGAGAGAAAATAAACCCGACGATTTTATCTCGGGGGAC AGAAGAAGCTTCGACAGGAAGTGAGTCGCGTTCTTCTGCGTTTCCAGTAG CCCGTCCAGACTCGATGGTCGGCTTTCAACAGATGCAACAGAAGGAGGCC GACGAAGGTGGTGGTGGTGGTTGCGCCGACTATAAAGGGACGGAGTGGAA AGCAGGAGATGGTGCCAGAGCAGAAGCGTGCGCGAACGATCTTGTCGGCG AAGTCGTGTGGTCGCTACTCTCGTTGGCAAGGTACTCGCTCAAGCCCGGC GGCCGGTTGTGTTTTTTTTTGCCTCTGAGGGGCGCAGAGGCGCGGCTCGT TAGCTTACCGACCGCTTTGCTGGAGGGGCTGAGCGCAGGCGATAATGATG CTGGAGGAGCAGGAGCAAACCGCTTGTTGGCGGTGTACGCAACGAAACAG CGCATGACAAGCCCGAACATGTGCCGTTGGCTGGTAGTTATGGAAAAGGA ACGTCAGTGACTCCGATTATGTCATGGAACGTGGTGCACAAGGCGTTATC ATACTTTTGATGCGGACGGCACAGCTGTGTGCATGCTGTAGATCGATCCC TCATCGGAAGGAAAAGGCTGTATATATACGTTTTTCTGGGAACTTCCGTA ATCTTGTGAGGATGCTCTTTGACATGAGTTTTCGCTTTTCGGGACCATCA CATTTTGGTTGCCCGCGGTCTGCAAAGTGGTAAGTACTCGGAGTGACTGG TTGTTTGAAGCCATAGAATGGATGACCCGACCATCTTTATCT
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Coding sequence (CDS) from alignment at P-littoralis_Contig87:366449..370940+

>mRNA_P-littoralis_Contig87.185.4 ID=mRNA_P-littoralis_Contig87.185.4|Name=mRNA_P-littoralis_Contig87.185.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1794bp|location=Sequence derived from alignment at P-littoralis_Contig87:366449..370940+ (Pylaiella littoralis U1_48)
ATGCAAACGACAATCTTTGAACTTGACAGTACGTGTCCTGCAGCGCAAGT
TTGGATGAGAGGTGTCAAACCGAGAAGCCTTCTGTTGTCCTGCTGCATCA
TCTTGCGGGAGAGCAATGCGTTGTCCACCACCAACGCACGATCTCTGAGA
CTGTGTGCTTTCAGGGGAAGATCGCGACACACCAGCGGTTTTGAACCGTT
CGAGACATTCGAGTTGGCACCACAAGAGTTCATCGCTTCGGCCCAACCGA
CAGGTTTGGAGGAACACGATATCCATCTAAAACCAACCAGAGGCTCCTCT
GTATTTCAGTGGATACATTCTTCCATGGGGGATGCGGAGCTTGCGGAGGC
AGCCTCAAGGTGTGTTTTGCTTCATGGGCTGTTCGAGGTGTGGGGGCATG
GCCGGAACCAGGAGGAAGCTGCCAAGGATGCATCCAGGTCAGGGCGCTTT
CTTCACTCGGTTGACGCGTCCTGGTCGGTAGGTGTGACCAGCTACGGCCG
CTCAAATCTGAAAAAAGTAGAACAACAAGCGATCGCTGGAGGATCCGTGG
AGGAGTTTCTGTCCACGTCCCTGAATGGTCGAAGGACCGAATCGCTCAAC
AGCGACATCCGCATTCGAATAATAGAGGACACTTGTCCACCTCCGGCCGT
AAACTTACCGCCAGATGTGCGAGAACGCGCCGAGGCGGAAGCAGCTGCTG
CAGGAAAGAGTAGAGAGAACAGGTTTTATATATGCCGCGAACTTCAAGTC
GGCGCTGCGGTCAGCGAGGGCGGAACAGCTATGTCGACGTCGTGCGGCAG
GCGTCCAATAAGGGGTGTGCTTGGCGCCTTGGCTCTCAACCTCCGAAGGT
GTTGCGGGCCCACGGCGATTGAGCCCGAAGTGGCGATTGTCATGGCCAAC
CTAGCGAAGGTGCGGCTGGGGTCGCTCATATTGGACCCTTTCTGTGGTTC
ATGCTCTCTTCTCCTGCCGGCGGCAAGCATGGGTGCCGAAGTGTGGGGTT
CAGACGTGGCTGGTCCGGCTACTGTGGCCCCACTTCACACAGTTGGACAG
GCTAGAGAACAGTTAGATGACGCCATGGCTGCGGGATGCAAGACAAATGA
ACAAGCCGACAGAGAAGGCTTAAATAACATGTACCAGGACTTCGGAGAGC
TGGGTCTCGCCCCTCCTACGCTTGTGGCGGCGGATGTGAGCAACGAAGAA
TCTCGTGTCCGGAGACCTGAGTTTTACGACGCAATAATCACGGACCCACC
CTACAACATCAAAGTCAAGGTTATCACCAACACCGACGCTCGTAGCCGAG
AGAAAATAAACCCGACGATTTTATCTCGGGGGACAGAAGAAGCTTCGACA
GGAAGTGAGTCGCGTTCTTCTGCGTTTCCAGTAGCCCGTCCAGACTCGAT
GGTCGGCTTTCAACAGATGCAACAGAAGGAGGCCGACGAAGGTGGTGGTG
GTGGTTGCGCCGACTATAAAGGGACGGAGTGGAAAGCAGGAGATGGTGCC
AGAGCAGAAGCGTGCGCGAACGATCTTGTCGGCGAAGTCGTGTGGTCGCT
ACTCTCGTTGGCAAGGTACTCGCTCAAGCCCGGCGGCCGGTTGTGTTTTT
TTTTGCCTCTGAGGGGCGCAGAGGCGCGGCTCGTTAGCTTACCGACCGCT
TTGCTGGAGGGGCTGAGCGCAGGCGATAATGATGCTGGAGGAGCAGGAGC
AAACCGCTTGTTGGCGGTGTACGCAACGAAACAGCGCATGACAAGCCCGA
ACATGTGCCGTTGGCTGGTAGTTATGGAAAAGGAACGTCAGTGA
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