prot_P-littoralis_Contig87.138.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig87.138.1
Unique Nameprot_P-littoralis_Contig87.138.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length155
Homology
BLAST of mRNA_P-littoralis_Contig87.138.1 vs. uniprot
Match: A0A6H5KG72_9PHAE (S1-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG72_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 5.850e-64
Identity = 127/174 (72.99%), Postives = 133/174 (76.44%), Query Frame = 0
Query:    1 MRNI-WLLGVAILLRGGEAFLGVPAPATALVAGGRVA--EASCNYLA-----------------GRRPVGAARVAASTVLLAXXXXXXXXXXEGAQPRERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK 154
            MRNI WLLGVA L   GEAF+GVP  ATALVA GR +  E+ C  L                   RRP    R AA++ LLA XXXXXXXX EGA+PRERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK
Sbjct:    1 MRNILWLLGVAALSSMGEAFVGVPVRATALVARGRASQQESCCTSLVTHSIHRTFAVDHDGQETARRPANMGRAAATSALLAKXXXXXXXXNEGAKPRERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK 174          
BLAST of mRNA_P-littoralis_Contig87.138.1 vs. uniprot
Match: D7G916_ECTSI (S1-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G916_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 3.700e-46
Identity = 89/130 (68.46%), Postives = 92/130 (70.77%), Query Frame = 0
Query:   52 ARVAASTVLLAXXXXXXXXXXEGAQPRERKEKDDVIE---------------------------VEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK 154
            ARVAA++ LLA          EGA+PRERKEKDDVIE                           VEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK
Sbjct:    2 ARVAATSALLAKKKGRGGGNNEGAKPRERKEKDDVIEPDSIFTSHAEKDCSAKACRMLVLLSQKVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK 131          
BLAST of mRNA_P-littoralis_Contig87.138.1 vs. uniprot
Match: A0A835YXL6_9STRA (S1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXL6_9STRA)

HSP 1 Score: 143 bits (361), Expect = 4.120e-41
Identity = 69/82 (84.15%), Postives = 76/82 (92.68%), Query Frame = 0
Query:   73 EGAQPRERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK 154
            EGA PRE+K KDDVIEVEGVVKE LPSAMFRVE+  T +++LCTISG+IRKNFVRILVGDPV+VELSPYDLTRGRITFRYKK
Sbjct:   64 EGATPREKKVKDDVIEVEGVVKESLPSAMFRVEISPTNQIILCTISGKIRKNFVRILVGDPVKVELSPYDLTRGRITFRYKK 145          
BLAST of mRNA_P-littoralis_Contig87.138.1 vs. uniprot
Match: A0A6U1NIU1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NIU1_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.990e-32
Identity = 61/80 (76.25%), Postives = 70/80 (87.50%), Query Frame = 0
Query:   75 AQPRERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK 154
            AQP+    K+DVIEVEGVVKE LP+AMFRVE+ A   V+LCTISG+IRKNFV++LVGD VRVELSPYDLTRGRITFRY+K
Sbjct:   83 AQPKPST-KEDVIEVEGVVKESLPNAMFRVELEANQNVILCTISGKIRKNFVKVLVGDSVRVELSPYDLTRGRITFRYRK 161          
BLAST of mRNA_P-littoralis_Contig87.138.1 vs. uniprot
Match: A0A7S4EBF0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBF0_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.300e-32
Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 0
Query:   78 RERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFR 151
            RERK KDD IEV+GVV E LPSA FRVE+GAT +V+LCTISG+IRKNFV+ILVGD V+VELSPYDLTRGRITFR
Sbjct:   54 RERKVKDDKIEVDGVVTEALPSANFRVEIGATKQVLLCTISGKIRKNFVKILVGDSVKVELSPYDLTRGRITFR 127          
BLAST of mRNA_P-littoralis_Contig87.138.1 vs. uniprot
Match: W7THD1_9STRA (Translation initiation factor if-1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THD1_9STRA)

HSP 1 Score: 107 bits (268), Expect = 8.670e-27
Identity = 49/72 (68.06%), Postives = 64/72 (88.89%), Query Frame = 0
Query:   80 RKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFR 151
            + ++ DVIEV+G+VKE LP+A FRVE+ AT  V++C+ SG++RKNFVR+LVGDPV+VELSPYDLTRGRIT+R
Sbjct:   73 KNKESDVIEVDGIVKESLPNAKFRVELVATKAVIVCSTSGKMRKNFVRVLVGDPVKVELSPYDLTRGRITYR 144          
BLAST of mRNA_P-littoralis_Contig87.138.1 vs. uniprot
Match: A0A7R9YY09_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YY09_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.150e-26
Identity = 57/77 (74.03%), Postives = 65/77 (84.42%), Query Frame = 0
Query:   78 RERKEKDDVIEVEGVVKEGLPSAMFRVEV-GA--TGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFR 151
            RE+K+KDDVIEVEGVV E LP+AMFR  + GA  T + VL TISG+IRKNFV+ILVGD V +ELSPYDLTRGRITFR
Sbjct:   77 REKKKKDDVIEVEGVVLESLPNAMFRCAIDGAPDTQEPVLATISGKIRKNFVKILVGDKVTIELSPYDLTRGRITFR 153          
BLAST of mRNA_P-littoralis_Contig87.138.1 vs. uniprot
Match: A0A1Z5KC21_FISSO (Translation initiation factor IF-1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC21_FISSO)

HSP 1 Score: 104 bits (259), Expect = 6.330e-26
Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 0
Query:   78 RERKEKDDVIEVEGVVKEGLPSAMFRVEV-GA--TGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYK 153
            R RK KDDVIEVE VV EGLP+AMFR  + GA  + + +L TISG+IRKNFV+ILVGD V +ELSPYDLTRGRITFRY+
Sbjct:   47 RVRKTKDDVIEVEAVVVEGLPNAMFRCAIDGAPESQEPILATISGKIRKNFVKILVGDKVLIELSPYDLTRGRITFRYR 125          
BLAST of mRNA_P-littoralis_Contig87.138.1 vs. uniprot
Match: A0A7S2A1G4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A1G4_TRICV)

HSP 1 Score: 103 bits (256), Expect = 4.010e-25
Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 0
Query:   78 RERKEKDDVIEVEGVVKEGLPSAMFRVEV-GA--TGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFR 151
            R +K+KDDVIEVEGVV E LP+AMFR  + GA  T + VL TISG+IRKNFV+ILVGD V +ELSPYDLTRGRITFR
Sbjct:   76 RVKKQKDDVIEVEGVVLESLPNAMFRCAIDGAPETQEPVLATISGKIRKNFVKILVGDKVTIELSPYDLTRGRITFR 152          
BLAST of mRNA_P-littoralis_Contig87.138.1 vs. uniprot
Match: A0A8J5XIJ6_DIALT (S1-like domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XIJ6_DIALT)

HSP 1 Score: 102 bits (254), Expect = 4.020e-25
Identity = 48/72 (66.67%), Postives = 62/72 (86.11%), Query Frame = 0
Query:   83 KDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK 154
            K+DVIE++G V E LP+AMFRVEV  T +++L  ISG+IRKNF+++LVGD V+VELSPYDLT+GRITFR +K
Sbjct:   58 KEDVIELDGTVIEKLPNAMFRVEVANTDQILLAHISGKIRKNFIKVLVGDKVKVELSPYDLTKGRITFRSRK 129          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig87.138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG72_9PHAE5.850e-6472.99S1-like domain-containing protein n=1 Tax=Ectocarp... [more]
D7G916_ECTSI3.700e-4668.46S1-like domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YXL6_9STRA4.120e-4184.15S1-like domain-containing protein n=1 Tax=Tribonem... [more]
A0A6U1NIU1_9STRA1.990e-3276.25Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4EBF0_9STRA2.300e-3281.08Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
W7THD1_9STRA8.670e-2768.06Translation initiation factor if-1 n=2 Tax=Monodop... [more]
A0A7R9YY09_9STRA5.150e-2674.03Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A1Z5KC21_FISSO6.330e-2670.89Translation initiation factor IF-1 n=1 Tax=Fistuli... [more]
A0A7S2A1G4_TRICV4.010e-2572.73Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A8J5XIJ6_DIALT4.020e-2566.67S1-like domain-containing protein n=1 Tax=Diacrone... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004368Translation initiation factor IF-1TIGRFAMTIGR00008TIGR00008coord: 83..152
e-value: 1.4E-26
score: 90.2
IPR004368Translation initiation factor IF-1PANTHERPTHR33370TRANSLATION INITIATION FACTOR IF-1, CHLOROPLASTICcoord: 76..153
IPR004368Translation initiation factor IF-1HAMAPMF_00075IF_1coord: 81..153
score: 23.171724
IPR004368Translation initiation factor IF-1CDDcd04451S1_IF1coord: 87..151
e-value: 1.89017E-28
score: 97.9765
IPR006196RNA-binding domain, S1, IF1 typePFAMPF01176eIF-1acoord: 87..151
e-value: 1.7E-21
score: 75.8
IPR006196RNA-binding domain, S1, IF1 typePROSITEPS50832S1_IF1_TYPEcoord: 77..153
score: 18.451586
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 74..153
e-value: 9.4E-32
score: 110.7
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 64..152
NoneNo IPR availablePANTHERPTHR33370:SF1TRANSLATION INITIATION FACTOR IF-1, CHLOROPLASTICcoord: 76..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig87contigP-littoralis_Contig87:262722..282336 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig87.138.1mRNA_P-littoralis_Contig87.138.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig87 261090..282793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig87.138.1 ID=prot_P-littoralis_Contig87.138.1|Name=mRNA_P-littoralis_Contig87.138.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=155bp
MRNIWLLGVAILLRGGEAFLGVPAPATALVAGGRVAEASCNYLAGRRPVG
AARVAASTVLLAKKKGRGGGNNEGAQPRERKEKDDVIEVEGVVKEGLPSA
MFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITF
RYKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004368TIF_IF1
IPR006196RNA-binding_domain_S1_IF1
IPR012340NA-bd_OB-fold