mRNA_P-littoralis_Contig87.127.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig87.127.1 vs. uniprot
Match: A0A6H5JJK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK7_9PHAE) HSP 1 Score: 582 bits (1499), Expect = 8.170e-201 Identity = 301/396 (76.01%), Postives = 340/396 (85.86%), Query Frame = 1
Query: 1 MTTPSGLSDRIATCADAVRFLVRGEDSPNSSYDSYKKVMEFFPPGEATGYTNTNLVRAALVYLKLGFADPDTPDRKVSIALYVAIYTGHDHDDDDGVLAKEFGKRFQVLGNYDANVMTKIFNLSLCNKRTLTLLDTTIAPGRKKKDTFAMINHEFRVEFILLYYKVVRSLVLRGQSLTDFGYPADLTADDVEAAQKTLDKHVSSIADKYWLCFNMEALKKPRVYNNLFPPGGQLPRVVIGREHIDPNLATTDTLRASVDDKPGKDEFVEIMRVIICLPMRGPVATFRDLQFESVKKHCMEAILDMSEVGEVLETMSQAVDHADVQAKLASSEEENSVLKEEISVLK-KNLDLGEELDSCSSLEERYRSVLKTLSTKDEKLEEYEHENRRLKLNEAG 1185
MT PS LS RI TCADAVRF++RG+D SS +SY++V+++ P +ATGYTNTNLV+AA+ YLK FA DT DRK+SIALYVAIY GHDHD DDGVLAKEF KRFQ + NYD ++MTKIFN+SLCN R L LLD + G+KKKD A+I+HEFRVEF+LLY+ VV+SLVLRGQSLTDFGYPA+LTADDVEAA+KT D HVSSIA+KYW CF MEALKKPRV NNLFP G QLPRVVIGREHID LAT DTLR+S+DDK GK EF+EI R +ICLP+RGP ATFRDL FESVKK+ ME IL S+VGE++ETMSQAVDHADVQAKLASSEEENS+LKEEISVLK KNL+LGEELDS SSLEERYRSVLKTLSTKDEKLE+YEHENRRLK NEAG
Sbjct: 1 MTPPSELSKRIGTCADAVRFVLRGKDGYPSSQESYEEVIQYLPAEKATGYTNTNLVKAAVEYLKKSFATSDTSDRKISIALYVAIYVGHDHDHDDGVLAKEFCKRFQDVENYDKHMMTKIFNMSLCNDRILALLDAVTSSGKKKKDVIALIDHEFRVEFVLLYFNVVKSLVLRGQSLTDFGYPAELTADDVEAAEKTFDNHVSSIANKYWPCFKMEALKKPRVVNNLFPSGDQLPRVVIGREHIDFKLATLDTLRSSLDDKAGKGEFLEITRALICLPIRGPEATFRDLHFESVKKYFMETILGTSKVGELIETMSQAVDHADVQAKLASSEEENSLLKEEISVLKRKNLELGEELDSYSSLEERYRSVLKTLSTKDEKLEQYEHENRRLKQNEAG 396
BLAST of mRNA_P-littoralis_Contig87.127.1 vs. uniprot
Match: A0A6H5JXI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXI0_9PHAE) HSP 1 Score: 326 bits (836), Expect = 1.510e-102 Identity = 196/402 (48.76%), Postives = 268/402 (66.67%), Query Frame = 1
Query: 1 MTTPSGLSDRIATCADAVRFLVRGEDSPNSSYDSYKKVMEFFPPGEATGYTNTNLVRAALVYLKLGFADPDTPDRKVSIALYVAIYTGHDHDDDDGVLAKEFGKRFQVLGNYDANVMTKIFNLSLCNKRTLTLLDTTIAPGRKKKDTFAMINHEFRVEFILLYYKVVRSLVLRGQSLTDFGYPADLTADDVEAAQKTLDKHVSSIADKYWLCFNMEALKKPRVYNNLFPPGGQLPRVVIGREHIDPNLATTDTLRASVDDKPGKDEFVEIMRVIICLPMRGPVATFRDLQFESVKKHCMEAILDMSEVGEVLETMSQAVDHADVQAKLASSEEENSVLKEEISVLKKNLDLGEELDSCSSLEERYRSVLKTLSTKDEKLEEYEHENRRLKLNEAGYKSTESY 1206
MT+ S LS RI+ C+DA+RF VRG+D SSY ++V++ PP E+T + N NL++A+L YLK D D RKVSIALYVAIY G+D D+ DG LA EF KRF+ L NYD VM KIF+LSLC RT+ LLD + P KK++ A I+HE RVEFILLY V++SLV RG+ LTD GY A +T ++EAA +HVSSIA+K+W CFN+EALKKPRV NNLFP G+LPRVVIGREHID + ATTDTL+ ++ D+P KDEF+++M I+ L GPV T+ L+ E VK M+ IL ++V +VLE + + + KL + + S L ++IS +K ++ S +++ + LK+ S++ E+LEE E E +RL+ + YK +S+
Sbjct: 1 MTSYSDLSQRISVCSDAIRF-VRGKDEHASSY---QEVIKLLPPVESTKHRNINLIKASLEYLKKSIDDGDNAGRKVSIALYVAIYIGYD-DEKDG-LANEFCKRFRGLENYDVKVMMKIFSLSLCTGRTVVLLDNAMLP--KKRNIKADIDHELRVEFILLYMYVLKSLVRRGEPLTDLGYLAGVTVANMEAAWLISGEHVSSIANKFWPCFNIEALKKPRVKNNLFPSDGKLPRVVIGREHIDFDQATTDTLKGALLDRPEKDEFLQVMCAIVSLAACGPVKTYLALELEPVKAFFMDTILHKTQVDQVLEAVPEIANTTFFIRKLGKYKAKVSALTQKISSMK---------ETEESARQKFLASLKSNSSQQEELEENERELKRLRESVDMYKYDQSF 385
BLAST of mRNA_P-littoralis_Contig87.127.1 vs. uniprot
Match: A0A6H5K2L9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L9_9PHAE) HSP 1 Score: 185 bits (470), Expect = 2.650e-50 Identity = 141/411 (34.31%), Postives = 208/411 (50.61%), Query Frame = 1
Query: 13 SGLSDRIATCADAVRFLVRGEDSPNSSYDSYKKVMEFFPPGEATGYTNTNLVRAALVYLKLGFADPDTPDRKVSIALYVAIYTGHDHDDDDGVLAKEFGKRFQVLGNYDANVMTKIFNLSLCNKRTLTLLDTTIAPGRKKKDTFAMINHEFRVEFILLYYKVVRSLVLRGQSLTDFGYPADLTADDVEAAQKTLDKHVSSIADKYWLCFNMEALKKPRVYNNLFPPGGQLPRVVIGREHID------------------------------------PNLATTDTLRASVDDKPGKDEFVEIMRVIICLPMRG--PVATFRDLQFESVKKHCMEAILDMSEVGEVLETMSQAVDHADVQAKLASSEEENSVLKEEISVLKKNLDLGEELDSCSSLE-------ERYRSVLK 1110
S L +RI C++A+ L E+ + S SY++VM+ P TG NT+L++A+ YLKLGF D DTP RKV+IAL+VA+ +DHD++ A+E +RFQ L +YD NVM KI + S+ N R LLD + R++ +T + EF EF+L+++ ++ LV LTD GY A++T DD+E A++ + KH+ IA K CF + LK P LFP G LP IG H+ T D LR S+ DKP K EF+E++ I PV T+ L +S K +E ILD ++ E + + + + +++ K S EEENS LK++ L EE++ S +E E+YR + K
Sbjct: 6 SPLFERITLCSNAI--LACKENRKHDS--SYEEVMQHLPH-TVTGKDNTDLIKASQEYLKLGFVDRDTPIRKVNIALWVAVSLANDHDNNK--FAQEVCERFQGLYDYDRNVMEKIISFSMYNDRIGKLLDKVMI--RQESNTTPAFDLEFNAEFVLIFFNIMECLVKDKHRLTDLGYAANVTPDDMEKAREIIHKHLDDIAMKCSPCFKKKELKPP-ARRELFPATGVLPHPSIGCNHVTYDEVIDKLKEGFLDNAEKEDDEXXXXXXXXXXXXXXXKKVTIDKLRESLLDKPEKGEFLEMIFAAISHASNKDEPVVTYHVLTLDSAKDFFLEKILDKAQAEETRQAILASDEARELRQKNKSLEEENSFLKQQ---------LLEEMEMASLVEQQREHQEEKYRKLCK 397
BLAST of mRNA_P-littoralis_Contig87.127.1 vs. uniprot
Match: A0A6H5K7U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U4_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.050e-48 Identity = 106/268 (39.55%), Postives = 159/268 (59.33%), Query Frame = 1
Query: 157 TNLVRAALVYLKLGFADPDTPDRKVSIALYVAIYTGHDHDDDDGVLAKEFGKRFQVLGNYDANVMTKIFNLSLCNKRTLTLLDTTIAPGRKKKDTFAMINHEFRVEFILLYYKVVRSLVLRGQSLTDFGYPADLTADDVEAAQKTLDKHVSSIADKYWLCFNMEALKKPRVYNNLFPPGGQLPRVVIGREHIDPNLATTDTLR-ASVDDKPGKDEFVEIMRVIICLPMRGPVATFRDLQFESVKKHCMEAILDMSEVGEVLETMSQAV 957
T L +A + Y++ FA +TPDRK+ IA+ V + D + DG L K RF+ L +YD M+ +FNLS+ N R L LLD + KK++ I HEFRVE++L+Y+ ++ S + RG++L D GY T D++ A++TL+KHVS IA + CF++EA K R NLFP G L + IG EH D + AT +TL+ VDD KDEF++I+ II R P+ T+ ++ E+V M+ IL+ +E +V+ + Q +
Sbjct: 16 TKLTKACMEYIRGAFAKRETPDRKLKIAICVVVSIASDLAETDG-LTKAIRDRFRGLDDYDHRAMSDVFNLSILNDRALALLDKVMI--LKKENVRRDIQHEFRVEYVLIYFGILESALRRGEALDDLGYVTHATPSDMKKARETLEKHVSLIATRCGPCFHLEAAKNARPRINLFPVNGTLSQATIGCEHADFDQATINTLKNCFVDDTKEKDEFLDIIFAIISHAHRQPLETYAGIKTETVAICFMKTILEETEADDVMNVIKQTM 280
BLAST of mRNA_P-littoralis_Contig87.127.1 vs. uniprot
Match: D8LPH3_ECTSI (EsV-1-151 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPH3_ECTSI) HSP 1 Score: 161 bits (408), Expect = 1.320e-41 Identity = 110/320 (34.38%), Postives = 169/320 (52.81%), Query Frame = 1
Query: 1 MTTPSGLSDRIATCADAVRFLVRGEDSPNSSYDSYKKVMEFFPPGEATGYTNTNLVRAALVYLKLGF--ADPDTPDRKVSIALYVAIYTGHDHDDDDGVLAKEFGKRFQVLGNYDANVMTKIFNLSLCNKRTLTLLDTTIAPGRKKKDTFAMINHEFRVEFILLYYKVVRSLVLRGQSLTDFGYP-ADLTADDVEAAQKTLDKHVSSIADKYWLCFNMEALKKPRVYNNLFPPGGQLPRVVIGREHIDPNLATTDTLRAS--VDDKP---GKDEFVEIMRVIICLPMRGPVATFRDLQFESVKKHCMEAILDMSEVGEVL 936
M TP+ L + I TC+ A+R G SY++VM P +T L +AA +++ GF DRKV IA+ VA D +D L K RF+ + ++D VM KIF+LS+C+ L LLD + KK D + E RVEF+L+++ ++ ++V RG+S +D GY A TA+D+ A+ TL+KH + +ADKY CF ++A K PR PR+ IG +H+D ++AT DTL AS VD K K EF++++ II + P + ++ ++ K +E+IL +V+
Sbjct: 1 MITPTKLFESITTCSLALR---HGGQHGEDHESSYRRVMGSLP--------HTKLAKAAKSFIRAGFPAVGGKASDRKVEIAMCVATSIAQGRDGEDR-LVKSICDRFRGMEDFDRRVMKKIFSLSVCSDSVLALLDEVMVLKTKKGD----VERELRVEFVLMFFDILANMVKRGESSSDLGYVVAGATAEDMSNARATLEKHAALLADKYGACFRLKAFKIPR------------PRLTIGCKHVDFDVATIDTLSASLVVDAKTRSRSKGEFLDVVFAIIAQSHKTPQCVYAGMKTDAAKTFFLESILGRGAADDVM 292
BLAST of mRNA_P-littoralis_Contig87.127.1 vs. uniprot
Match: A0A6H5KVG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVG0_9PHAE) HSP 1 Score: 152 bits (383), Expect = 5.180e-38 Identity = 113/372 (30.38%), Postives = 194/372 (52.15%), Query Frame = 1
Query: 7 TPSGLSDRIATCADAVRFL-VRGEDSPNSSYDSYKKVMEFFPPGEATGYTNTNLVRAALVYLKLGFADPDTPDRKVSIALYVAIYTGHDHDDDDGVLAKEFGKRFQVLGNYDANVMTKIFNLSLCNKRTLTLLDTTIAPGRKKKDTFAMINHEFRVEFILLYYKVVRSLVLRGQ--SLTDFGYPADLTADDVEAAQKTLDKHVSSIADKYWLCFNMEALKKPRVYNNLFPPGGQLPRVV-IGREHIDPNLATTDTLRASVD-DKPGKDEFVEIMRVIICLPMRGPVATFRDLQFESVKKHCMEAILDMSEVGEVLETMSQAVDHADVQAKLASSEEENSVLKEEISVLKKNLD-LGEELDSCSSLEERYRSV 1104
T S L I+ C++A+R+L ++ +SYD VM+ P + T + +TNL +A + ++K D DT DRKV +A+ VA+ + LAKE R + + +++ +MT++FNLS+ R TLLD I +KK I E VEF++L++ +V S++ RG + ++ GY T D+ A+ L+KHVS+IA CF ++ALK+ R NL P G LP+ +G +H+D L++S+ D F++I+ + L + P TF D++ ++ + ++ +LD ++ ++++ M V K EN +LK+++ L + L G EL SL ++ + V
Sbjct: 2 TTSKLFITISICSEAIRYLRAHKQEEWKTSYDH---VMQSLPAEDKTEHVHTNLTKACMEFMKAEVFDKDTSDRKVMVAIRVAVSIAI--GEAQRGLAKEICDRLRKVEDFNRYLMTEVFNLSIVTDRVCTLLDDVII--HQKKHVSKDIQQELCVEFVVLFFGIVESILRRGHCHTFSELGYATSATPSDMGNARNILEKHVSAIAAMCGPCFILKALKEKRPRLNLLPANGTLPQTTTLGTDHVDFASCGIYVLKSSLSHDSKETKTFLDIIFATMSLSHKTPADTFDDIRLDTTRTFFLDKVLDRTDADQLVKKMEDPK----VMFK------ENLLLKDKVKNLAQELSSTGAELVDTKSLLQQEKGV 356
BLAST of mRNA_P-littoralis_Contig87.127.1 vs. uniprot
Match: A0A6H5JFF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFF2_9PHAE) HSP 1 Score: 124 bits (312), Expect = 6.090e-28 Identity = 102/350 (29.14%), Postives = 162/350 (46.29%), Query Frame = 1
Query: 115 MEFFPPGEATGYTNTNLVRAALVYLKLGFADPD-TPDRKVSIALYVAIYTGHDHDDDDGVLAKEFGKRFQVLGNYDANVMTKIFNLSLCNKRTLTLLDTTIAPGRKKKDTFAMINHEFRVEFILLYYKVVRSLVLRGQ---------SLTDFGYPADLTADDVEAAQKTLDKHVSSIADKYWLCFNMEALKKPRVYNNLFPPGGQLPRVV-IGREHIDPNLATTDTLRASV-DDKPGKDEFVEIMRVIICLPMRGPVATFRDLQFESVKKHCMEAILDMSEVGEVLETMSQAVDHADVQAKLASSEEENSVLKEEISVLKKNLD-----LGEELDSCSSLEERYRSVLKT 1113
M+ P + T + +TNL +A + ++K D D DRK IA VA+ D LAKE R + + + + ++M ++FNLS+ R LLD I +K I HE VEF+LL++ +V S++ RG + + Y T D+ A+ L+KH S+IA CF ++ALKK R NLFP G P+ +G + +D D L +S+ + D F++I+ I+ L + P T ++ S K +E +LD + ++ A+ E + L +E+S ++ LD L +E CS LE S+L T
Sbjct: 1 MQSLPAEDKTEHAHTNLTKACMEFMKAEVFDKDPASDRKARIAFCVAMSIATDRAQTG--LAKEICDRLRKVEDLNRHLMVEVFNLSIVTDRVCILLDDVII---HRKHVSKDIQHELCVEFVLLFFGIVESILRRGHHHGNNNHDFAFGELEYATSATPSDMTNARDILEKHASAIAAMCGPCFKLKALKKSRPRLNLFPAHGAPPQTTTLGTDPVDFAGCGFDVLTSSLLSNSKETDTFLDIIFAIVSLSHKTPADTLETIKLNSTKTFLLENVLDKAAADCAMQRDKDAI----------LLENQVKTLAQELSAIEAKLDDTRQLLQQEKRRCSELEADKESLLAT 335 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig87.127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig87.127.1 >prot_P-littoralis_Contig87.127.1 ID=prot_P-littoralis_Contig87.127.1|Name=mRNA_P-littoralis_Contig87.127.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=403bp MTTPSGLSDRIATCADAVRFLVRGEDSPNSSYDSYKKVMEFFPPGEATGYback to top mRNA from alignment at P-littoralis_Contig87:225014..226222+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig87.127.1 ID=mRNA_P-littoralis_Contig87.127.1|Name=mRNA_P-littoralis_Contig87.127.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1209bp|location=Sequence derived from alignment at P-littoralis_Contig87:225014..226222+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig87:225014..226222+ >mRNA_P-littoralis_Contig87.127.1 ID=mRNA_P-littoralis_Contig87.127.1|Name=mRNA_P-littoralis_Contig87.127.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1209bp|location=Sequence derived from alignment at P-littoralis_Contig87:225014..226222+ (Pylaiella littoralis U1_48)back to top |