prot_P-littoralis_Contig87.64.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig87.64.1
Unique Nameprot_P-littoralis_Contig87.64.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length307
Homology
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BLAST of mRNA_P-littoralis_Contig87.64.1 vs. uniprot
Match: D8LKD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD6_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 3.280e-8
Identity = 61/237 (25.74%), Postives = 94/237 (39.66%), Query Frame = 0 
Query:   84 RSSTVVLHKADPFERDSELLARGSLDLQQAAKLVVLNLGADPSLLSHTSDATRRRKLLSDAMYESMHPAGTVFAPIPQPWHHNLGIVHDAMESTGLRVEDHPLLVHYVSTRGGRPSSANILHQRPTAVMVLIAHCDAGGSQPFTCNDKVTSEHPFGAPAGTVAIPKSSMIRVPAPGRNQAV--------PTTAL-------SYAVNRFTSVGDTVCCLPIETSLEMSGVALRTGRKI 305
            R     +   D F  D +   R     + +A LV +NLGADPSLL  T +AT R      A+   +HP GTV   +    + +   +   +++  L +E +P++  Y+  + GR       H       VL+AH           ND     HP G          S+  + P     +AV        P+TA         + +NRFT  GD V     E +  ++ + L  GR +
Sbjct:   43 RKEVTTVQSVDIFSSDFDSTTRPLEVDRDSAMLVFVNLGADPSLLDGTDEATERLHAGLVALESVLHPRGTVVIAMGSIANFDFPCMEARLKAADLAMEKNPVVSIYLEGQPGRIPERLKNHLTTQGCSVLVAH---------KTNDFACHGHPLGKRRAARGAASSASFKSPRQASFEAVGFVVSDKHPSTATFLSTSTADHLINRFTVPGDCVLVTTFEEN-PLASLVLGQGRHL 269
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig87.64.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKD6_ECTSI3.280e-825.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig87contigP-littoralis_Contig87:121896..123319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig87.64.1mRNA_P-littoralis_Contig87.64.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig87 121896..123343 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig87.64.1 ID=prot_P-littoralis_Contig87.64.1|Name=mRNA_P-littoralis_Contig87.64.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=307bp
MTHTGGGCGASESFDQRDDFAHSLGDKARICVKCKPALEQQGRASNQKER
AADGVVTSRSRRKESARVLKPISPTACDILQERRSSTVVLHKADPFERDS
ELLARGSLDLQQAAKLVVLNLGADPSLLSHTSDATRRRKLLSDAMYESMH
PAGTVFAPIPQPWHHNLGIVHDAMESTGLRVEDHPLLVHYVSTRGGRPSS
ANILHQRPTAVMVLIAHCDAGGSQPFTCNDKVTSEHPFGAPAGTVAIPKS
SMIRVPAPGRNQAVPTTALSYAVNRFTSVGDTVCCLPIETSLEMSGVALR
TGRKIEV
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