mRNA_P-littoralis_Contig87.33.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE) HSP 1 Score: 565 bits (1457), Expect = 1.080e-198 Identity = 310/411 (75.43%), Postives = 321/411 (78.10%), Query Frame = 1
Query: 1 MPSTLSKASGSVERATATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKTPGREQIPDRGGSGP*SEARWHRYTTSCGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD-GEEDEGFIGTPLEVATSYIRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAALSR 1230
MPSTLSKASGSVERA ATTDIDRR GDT+ TPLMVASVIGSSRVV+DLLRQGASVSVADSDGYTALHHSVYH+ G+ + LRANANPLLSAYGSLPL AVYNGHLKVV ELV+WYGTDRCT+DGG LAL TAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACV LLL R GGN N TRAYVNM HGTLPE YD+FVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD GEEDE FIGTPLE+ATSY RRFSPMRVHREMVRGLKGVIRLLRQEEAVH+VSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAA+SR
Sbjct: 1 MPSTLSKASGSVERAVATTDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEARPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRANANPLLSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNINVSTRAYVNMAHGTLPETYDDFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEDFIGTPLELATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHAVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAAMSR 411
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 550 bits (1417), Expect = 4.620e-187 Identity = 301/411 (73.24%), Postives = 317/411 (77.13%), Query Frame = 1
Query: 1 MPSTLSKASGSVERATATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKTPGREQIPDRGGSGP*SEARWHRYTTSCGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD-GEEDEGFIGTPLEVATSYIRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAALSR 1230
MPSTLSKASGS + ATTDIDRR G T+QTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHH+VYHK + ANANPLLSAYGSLPL MAVY+GHL+VVRELV+WYGTDRCTSDGGALAL TAASRKHVDIV FLC+AGVVDTEGVALCAAIEGCSEACV LLL R GGNANTGTRAYVNMDHGTLPE Y+EFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD GEEDEGFIGTPL++ATSY+RRFS M+VHREMVRGLKGVIRLL+QEEAVHSVSWTWPIDTGRS ER SRKKSTSIARM+PLLKRRAA RVLLAA+SR
Sbjct: 422 MPSTLSKASGSADPTIATTDIDRRCGGTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYVRRFSTMKVHREMVRGLKGVIRLLQQEEAVHSVSWTWPIDTGRSAERVSRKKSTSIARMVPLLKRRAATLRVLLAAMSR 832
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE) HSP 1 Score: 489 bits (1260), Expect = 2.020e-168 Identity = 291/459 (63.40%), Postives = 299/459 (65.14%), Query Frame = 1
Query: 1 MPSTLSKASGSVERATATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKTPGREQIPDRGGSGP*SEARWHRYTTSCGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYGSLPLH-MAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAI-----------------------------------------------EGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD-GEEDEGFIGTPLEVATSYIRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAALSR 1230
MPSTLSKASGS + ATTDIDRR GDT+QTPLMVASVIG SRVVRDLLRQGASVSVADSDGYTALHH+VYHK + LSAYGSLPL+ M RELVYWYG DRCTSDGGALALVTAASRKHVDIVTFL DAGVVDTEGVALCAAI EGCSEACV LLL R GGNANTGTRAYVNMDHGTLPE YDEFVFQETPLVSTFNLGSFHAP FARLLLEAGADATSGVRFPCDSD GEEDEGFIGTPL++ATSY RRFS M VHREMV LKGVIRLLRQEEAVHSVSWTWPID GRSVERASRKK TSIARM+PLLKRRAAKPRVLLAALSR
Sbjct: 7 MPSTLSKASGSADPTIATTDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAYGSLPLYIMXXXXXXXXXXRELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGVVDTEGVALCAAIXWRCTMDIWKWSASLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYDEFVFQETPLVSTFNLGSFHAPGFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSSMSVHREMVPELKGVIRLLRQEEAVHSVSWTWPIDNGRSVERASRKKPTSIARMVPLLKRRAAKPRVLLAALSR 465
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 494 bits (1273), Expect = 8.840e-166 Identity = 289/437 (66.13%), Postives = 300/437 (68.65%), Query Frame = 1
Query: 25 SGSVERATATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKTPGREQIPDRGGSGP*SEARWHRYTTSCGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGA-KG---------------------------------KLGAVRVLLRANANPLLSAYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD-GEEDEGFIGTPLEVATSYIRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAALSR 1230
SGSVER ATTDIDRR GDT+QTPLMVASVIGSSRVVRDLLRQGASVS+ADSDGY ALHH+VYHK + G D PG G D TP+ A KG NPLLSA ELVYWYGTD CTSDGGALAL TAASR VDIVTFLCDAGVVDTEGVALCAAIEGCSEACV LLL R G A+T +RAYVNMDHG+LPE YDEFVFQE PLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSD GEEDEGFIGTPL++ATSY RRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAA+SR
Sbjct: 399 SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHK-----------------HLAVSKDLIEAGADLDARPG--GID---------------TPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGRKASTDSRAYVNMDHGSLPETYDEFVFQEPPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAAMSR 801
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 254 bits (650), Expect = 1.550e-77 Identity = 181/381 (47.51%), Postives = 218/381 (57.22%), Query Frame = 1
Query: 103 VASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKTPGREQIPDRGGSGP*SEARW-HRYTTSCGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYG--SLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDGEEDEGFI-GTPLEVATSYIRRFSPMRVHREMVR-GLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAALSR 1230
VAS +G RVVR LLR GA VS AD+DG TALH S+ +K + + G+ EAR H G P + A + +G I G KG +GA ANP+L+AY SLPL +A NG L VVREL +G D C+ DGGA ALV AAS+ VDIVTFL D GVVD EG+ALCAA+EG E C+ LLL G NAN RAY NM H T Y +F +TPLVS F LG F++PR RLLL AGAD S VR+ +G E + + TPL +A S + + E V GLKGVIRLL+Q +AVH+ SW WP ++ +KST I RMLP LKRRA KPRV LA LSR
Sbjct: 37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGAD--LEARIDHHQALGVG----CTPLHVAAAKGFHKG-------MVMLIHAGVKGFVGA-------KANPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGVVDAEGIALCAAVEGRREECIELLLRTQGCNANAIARAYANMTHDTTLPMYSNQLFPDTPLVSAFELGGFYSPRITRLLLGAGADVASRVRY----EGIEGDCVMHDTPLTIAESTLPLWETYGETSEDVEFGLKGVIRLLKQVDAVHATSWCWP---------SALEKSTPIVRMLPGLKRRATKPRVALAPLSR 384
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 218 bits (554), Expect = 5.030e-63 Identity = 165/430 (38.37%), Postives = 217/430 (50.47%), Query Frame = 1
Query: 22 ASGSVERAT-----ATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKTPGREQIPDRGGSGP*SEARWHRYTTS----------------CGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDGEEDEGFIGTPLEVATSYIRR----FSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAALSRCV 1236
+SGSVER T+IDRR + T LM A+ G R+VR LLR GA VSV+ DG+TALH ++ + + + G+ ++A R + C ++ D R +G S G L AV +L + ANPLL + PL +A + GHL VV+ELV +G D C +G AL TAA H I+TFL DAGV+DT+G ALC AIEG +EAC++LL+ R GG+ + R Y N+D+ +E PL+ F G HAPR R LL+ GAD + VRF + GE I PL A +R F V R V GLKGV+RLL+QE AVH+ SW WP DT R+ T I R P+ R ++P VLLAA+ RCV
Sbjct: 26 SSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSRMSDG-------STAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGVIDTDGTALCDAIEGRNEACLKLLVSRRGGSEHMVERNYTNIDNA-----------RENPLLCAFGTGRGHAPRITRFLLDHGADTKNKVRFGIEGLGE----MIDEPLVAAKITLRHEQTYFKDADVDR--VDGLKGVVRLLQQEAAVHANSWAWPTDTDRA---------TKIVRK-PI--RPGSRPEVLLAAMGRCV 419
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI) HSP 1 Score: 202 bits (513), Expect = 4.720e-57 Identity = 168/448 (37.50%), Postives = 207/448 (46.21%), Query Frame = 1
Query: 1 MPSTLSKA-----SGSVER-----ATATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKT----------------------PGREQIPDRGGSGP*SEARWHRYTTSCGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDGEEDEGFIGTPLEVATSYIRRFSPMRVH---REMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLK-RRAAKPRVLLAALSRCV 1236
MPST S +GSVER + T+IDRR + T LM A+ G R+VR LLR GA VSV+ DG+ P +E + G P A + C ++ D R G S G L AV++LL+ ANP+L + PL +A + GHL VV+ELV +G D C+ +G AL TAA H I+TFL DAGV DT+G ALC AIEG SEAC++LL+ R GGNA+ Y N D + LV F G +APR R LL+ GAD VRF GE G PL VA I R E V GLK V+RLLRQE+AVH+ SW WPIDT R+ T I R P K +P VLLAA+ RCV
Sbjct: 1 MPSTTSTLYNAAWTGSVERTLDLLSDGFTEIDRRCEENGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXKADFLHPDQEVVQ---GQTPLHLATGEGF---CDGMVALIDAGANVDSRMSNG-------STAMYIAACTGNLDAVKILLQERANPMLCVGPTHPLDIATHGGHLGVVQELVQRFGVDGCSDEGAIGALETAAYENHQTILTFLLDAGVKDTDGTALCDAIEGRSEACLKLLVGRRGGNAHMAESHYTNTDSAC-----------DNALVCAFGAGRGYAPRMTRFLLDHGADTKKKVRFEIKGLGE----IAGGPL-VAAKIILRHEQTHFEDADEEGVDGLKEVVRLLRQEDAVHANSWAWPIDTDRA---------TKIVRKTPAFKIHPGPRPCVLLAAMGRCV 410
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI) HSP 1 Score: 150 bits (378), Expect = 1.110e-39 Identity = 103/190 (54.21%), Postives = 115/190 (60.53%), Query Frame = 1
Query: 1 MPSTLSKASGSVERATATTDIDRRRGDTSQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHK---------TPGREQIPDRGGSGP*SEARWHRYTTS--CGRDERVLPGNGGADRRRREGGQPARRRSHTPIRCGAKGKLGAVRVLLRANANPLLSAYGSLPLHMAVYNGHLKVVREL 537
MPSTLSKASGS++ ATT IDR GDT+QTPLMVASVIGSSRVVRDLLRQGASVSVADSDG TALHHSVYH G + GG + H T C + ++ D R +G P + G+L AVRVLLRANANPLLSA GSLPL+MAVYN L R L
Sbjct: 1 MPSTLSKASGSIDPTIATTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGGK----DTPLHVAATKGFCQGMKLLM------DSRLDDGATPL-------FLAASDGRLEAVRVLLRANANPLLSACGSLPLYMAVYNRPLVRNRSL 173
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 103 bits (258), Expect = 1.100e-20 Identity = 93/269 (34.57%), Postives = 133/269 (49.44%), Query Frame = 1
Query: 445 RANANPLLS----AYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSD-GGALALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTFNLGSFHA--PRFARLLLEAGADATSGVRFPCDSDGEEDEGFIGTPLEVATSYIRRFSPMR--VHREMVRGLKGVIRLLRQEEAVHSVSWTWP-------IDTGRSVERASRKKSTSIARM---LPLLKRRA 1194
RA ANPLL+ A+ LPL A NG L VV EL+ +G C GG AL AA + H+D++ L AGVVDT G+AL A V+ LL++ G + + AYV+ TPL+ ++G + P+ RLL++AGAD TS VRF + TPL +AT +R R + E++R L+ + RLL + EAVH+ SW W + G + + ST+ ++ LP+L+RRA
Sbjct: 168 RAKANPLLTRVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDT-GIALVKATSFGHMDVVKFLLQQQNGTPSEKS-AYVSRPRDPCGR---------TPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLP---VVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRA 422
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Match: A0A6H5KEI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI1_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.080e-19 Identity = 100/287 (34.84%), Postives = 131/287 (45.64%), Query Frame = 1
Query: 382 RSHTPIRCGA-KGKLGAVRVLLRANANPLL------SAYGSLPLHMAVYNGHLKVVRELVYWYGTDRCTSDGGAL--ALVTAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVRLLLERLGGNANTGTRAYVNMDHGTLPEAYDEFVFQETPLVSTF--NLGSFHAPRFARLLLEAGADATSGVRFPCDSDGEEDEGFIGTPLEVATSYIRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTG-----RSVERASRKKSTSIARMLPLLKRRA 1194
R+ TP+ A +G LGAV+VLL A ANPLL S +PL +A G VVREL+ +G C G L AL AA VDI++ + AGVVD G+AL AA+ EA V LL + T +YVN A D+ T L+ +F N PR R L++AGAD TS V+ + TPLE RR +L Q AVH+VSW WP D + R ++ T ++ ML +L+RRA
Sbjct: 11 RTATPLYIAAMQGHLGAVKVLLHAKANPLLTRSSECSGRSFVPLEVAAQTGRSAVVRELLREFGIRCCGGPSGRLLDALRVAAVYGQVDIMSIIMGAGVVDPVGLALLAAVGSGKEAAVGFLLRQQQERWQT---SYVNT-------ACDDDGL--TALLWSFGGNNNKPCNPRITRRLVDAGADTTSTVQLRAERSRTR---VNMTPLEYVNEATRR-------------------VLLQAVAVHAVSWMWPSDDPVLARPANSPRTTKHSPTPLSTMLTVLRRRA 263 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig87.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig87.33.1 >prot_P-littoralis_Contig87.33.1 ID=prot_P-littoralis_Contig87.33.1|Name=mRNA_P-littoralis_Contig87.33.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=247bp MAVYNGHLKVVRELVYWYGTDRCTSDGGALALVTAASRKHVDIVTFLCDAback to top mRNA from alignment at P-littoralis_Contig87:80755..81990+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig87.33.1 ID=mRNA_P-littoralis_Contig87.33.1|Name=mRNA_P-littoralis_Contig87.33.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1236bp|location=Sequence derived from alignment at P-littoralis_Contig87:80755..81990+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig87:80755..81990+ >mRNA_P-littoralis_Contig87.33.1 ID=mRNA_P-littoralis_Contig87.33.1|Name=mRNA_P-littoralis_Contig87.33.1|organism=Pylaiella littoralis U1_48|type=CDS|length=741bp|location=Sequence derived from alignment at P-littoralis_Contig87:80755..81990+ (Pylaiella littoralis U1_48)back to top |