prot_P-littoralis_Contig869.28.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig869.28.1
Unique Nameprot_P-littoralis_Contig869.28.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length185
Homology
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BLAST of mRNA_P-littoralis_Contig869.28.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 8.360e-30
Identity = 65/124 (52.42%), Postives = 83/124 (66.94%), Query Frame = 0 
Query:   33 PWRKEGVDGLYFDRDADS-YDNVDGDPVFSTGIAVSSDGFNYWSFGGKVYNVNATYVALSCLSPALLRRLRSWSLVCAGSKGR-WEEEVGGLMETIQHLEKGCRARMKTQDGHSVTVTGILRDG 154
            PWR++G  G +FDR A   + N+ G PVFSTG+A SSD FNY+S  GK Y+VNAT+V L CLSPALLRRLRSW L   G  G  WE +V  LM+ I+ L+ GC+A +    G   T+T ++R G
Sbjct:    3 PWRQQGYHGWFFDRRASGVHANLTGLPVFSTGLACSSDAFNYFSLSGKRYSVNATFVGLGCLSPALLRRLRSWHLATLGLPGAAWELDVLPLMKIIRLLQNGCKAEIAV--GDKQTITALVRMG 124
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BLAST of mRNA_P-littoralis_Contig869.28.1 vs. uniprot
Match: A0A6H5JXS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXS6_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 6.050e-17
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 0 
Query:   67 SSDGFNYWSFGGKVYNVNATYVALSCLSPALLRRLRSWSLVCAGSKGR-WEEEVGGLMETIQHLEKGCRARMKTQDGHSVT 146
            SSD FNY+S  G+ ++V+AT+V L CLSP LLRRLRSW L   G  G  WE ++  LME I+ L+ GC+  +   D  +VT
Sbjct:   60 SSDAFNYFSLSGRKHSVSATFVGLGCLSPTLLRRLRSWYLATLGLPGAAWELDILPLMEIIRWLQNGCKTEISIGDKQTVT 140
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig869.28.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZI4_ECTSI8.360e-3052.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXS6_9PHAE6.050e-1749.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig869contigP-littoralis_Contig869:33992..37267 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig869.28.1mRNA_P-littoralis_Contig869.28.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig869 33932..37407 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig869.28.1 ID=prot_P-littoralis_Contig869.28.1|Name=mRNA_P-littoralis_Contig869.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=185bp
MTSQELNEQVPTFLGEGFVTFLTNPRRVKEQRPWRKEGVDGLYFDRDADS
YDNVDGDPVFSTGIAVSSDGFNYWSFGGKVYNVNATYVALSCLSPALLRR
LRSWSLVCAGSKGRWEEEVGGLMETIQHLEKGCRARMKTQDGHSVTVTGI
LRDGRSPRHLPQGNAHSGQHSGSRCRVEHQPSRI*
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