mRNA_P-littoralis_Contig868.21.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig868.21.1
Unique NamemRNA_P-littoralis_Contig868.21.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig868.21.1 vs. uniprot
Match: A0A6H5JBA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA3_9PHAE)

HSP 1 Score: 427 bits (1097), Expect = 3.840e-128
Identity = 276/767 (35.98%), Postives = 391/767 (50.98%), Query Frame = 3
Query: 1509 PVQAGQQGGRRKILARDGRVAKPNLEEALLRARATSEKIFRDGICNLVPDVRRLLGDGQGMAKRVKRPTFSDGITKNKSKPRAQVVINKRVENLEKIVIAQAKEMQKAVGNQSGSASNMNAPFWCPGYLIKWVFGALARDIEIQSEGHRHDTRVQFNGNCVTHK---SLHIPDVCPVDMATIVHQVAPRQVIDGTFVRHLKMWEMYSKFLVDNFLYATCSRQGE-LGGEVI---LCFDKRQYVPPVKTFAHAVRFTTGKKTGEGGAKGKRGTHAYKTKNGKRNVRQEPVWEPAKRSFNLLSETPPEKEWGEFFSDRQNRDNVFALLCQYIRIELAKIEKERAGGNLTPEQLH-LSRLKLRVDGEPVPNEDFTETISYSSWHTNNCMTLSGHDNQTDTDGSITGVTGVMENGFGEDEVQALHHAWAVSQTD*ST----------VKASKRVEIMSVDTDVWIAALLVCAVYPATQNVHVVVRSQRGVGSSKECQHIDLLKLFDEIQALTHWPQEFTPLQRCLPVVAAYILCGTDFTPTLHSLTSRSMFDSYYQAAKNAGNFDFIRGLGKARTEGGVNIGLDLDRKECVKFVGLCYFYKNRKLFKDPTPGRQVSG-------GGEPDATKPWIEHIVRWTFRAHYSSARWQKVASDYDVIELHVQRMEWVANYWLSSYNSMSA-------YPVKVPEYHNSGYIRDGEKGHEDEVALMHIRRSPAVTLKPGEGIHVVRCNCKLKEGPRVCVGCICTKEGDGTCSDPCNC 3713
            P +   + GR +I++ DGR A   LEE++L A  T  +++ +G+      +     D     K+V+ PTFS      KS  R      + + +L++ V A +K         +G    M               G     ++  S+    D   +F  + ++      + +P  C VDMATIVH V P   +       L  WE Y+ ++VD  L+  CSR+G+ L G V+   LCFDKR  VP  K+FAH  R          GAK K      K K+G       P++  A   F L  +TPP  EW EF  +RQNRD V ++LCQYI  +L +I +++A G       H ++ ++LR+DGEP+ + DF+ T  Y SW+              D DG+   +    +NG GE E+QALHH + V     S           V+   RVE++SVDTDVW+AALL  A +P T+NV VVVR Q G+        +D+L+LF+ +  LT WP  FTPLQ+CLPV+AAY+LCGTDFTPT    TS  MF SY++  KN  N  F++ LG+   + G   G+ L+R+E +KFV L YF K +  F  P PG QV          G  D TK W++ I   T  A Y   + ++ A +YDV++L V RMEW+  YWLS     +A       YP+ VPE++N GY++D E    D    M +RR P VT+ PG G+  V+C C    G   C  C+C ++G   CS+ C C
Sbjct:  105 PFRLQSESGRTEIISADGRTALKVLEESMLAAPETLAQMWENGVKGEYVQLNPDRSDRDAPRKQVRLPTFSSAPEGRKSNTRVSSKAARHIGDLKQYVAALSKSRTGGTPIVAGPPPQM---------------GDSKGGMQGFSKSKAIDIVNKFAEDAISKPPPADIPVPHTCAVDMATIVHSVPPLAYVASRSRNRLLTWEAYASYIVDRLLWRLCSREGKKLQGRVVRIVLCFDKRAMVPNPKSFAHNARGLFP------GAKSK------KKKSG-------PLYTRAPYRFGLGDKTPPSSEWQEFLKNRQNRDGVCSVLCQYIHRQLGRIRQKKAAGIQLEWAEHCINEMRLRIDGEPLLSPDFSTTTGYKSWY-------------NDVDGAE--IPEEKDNGLGEGELQALHHVYQVCLQQQSREGSREGQEAGVREPVRVEVVSVDTDVWVAALLAYAAHPWTRNVRVVVRKQSGLYDQAAVTCVDVLELFNALTRLTSWPSAFTPLQKCLPVIAAYMLCGTDFTPTFFGFTSFFMFQSYFEYVKNPENHRFLKALGEHAVKDGAVAGVALEREELIKFVALAYFKKYQASFLYP-PGHQVEPIVDPKKRNGAVDETKAWVDAIHVRTSEAAYGQGKVREAAPNYDVLDLCVLRMEWLVEYWLSIVPVSAAGSEPSENYPIAVPEWNNKGYLKDPEV---DGCCKMLLRREPKVTIWPG-GVETVKCRCSDVPGRGQCTSCVCKQKGS-ICSELCKC 816          
BLAST of mRNA_P-littoralis_Contig868.21.1 vs. uniprot
Match: A0A6H5KQE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE5_9PHAE)

HSP 1 Score: 429 bits (1102), Expect = 1.360e-124
Identity = 277/767 (36.11%), Postives = 392/767 (51.11%), Query Frame = 3
Query: 1509 PVQAGQQGGRRKILARDGRVAKPNLEEALLRARATSEKIFRDGICNLVPDVRRLLGDGQGMAKRVKRPTFSDGITKNKSKPRAQVVINKRVENLEKIVIAQAKEMQKAVGNQSGSASNMNAPFWCPGYLIKWVFGALARDIEIQSEGHRHDTRVQFNGNCVTHK---SLHIPDVCPVDMATIVHQVAPRQVIDGTFVRHLKMWEMYSKFLVDNFLYATCSRQGE-LGGEVI---LCFDKRQYVPPVKTFAHAVRFTTGKKTGEGGAKGKRGTHAYKTKNGKRNVRQEPVWEPAKRSFNLLSETPPEKEWGEFFSDRQNRDNVFALLCQYIRIELAKIEKERAGGNLTPEQLH-LSRLKLRVDGEPVPNEDFTETISYSSWHTNNCMTLSGHDNQTDTDGSITGVTGVMENGFGEDEVQALHHAWAVSQTD*ST----------VKASKRVEIMSVDTDVWIAALLVCAVYPATQNVHVVVRSQRGVGSSKECQHIDLLKLFDEIQALTHWPQEFTPLQRCLPVVAAYILCGTDFTPTLHSLTSRSMFDSYYQAAKNAGNFDFIRGLGKARTEGGVNIGLDLDRKECVKFVGLCYFYKNRKLFKDPTPGRQVSG-------GGEPDATKPWIEHIVRWTFRAHYSSARWQKVASDYDVIELHVQRMEWVANYWLSSYNSMSA-------YPVKVPEYHNSGYIRDGEKGHEDEVALMHIRRSPAVTLKPGEGIHVVRCNCKLKEGPRVCVGCICTKEGDGTCSDPCNC 3713
            P +   + GR +I++ DGR A   LEE++L A  T  +++ +G+      +     D     K+V+ PTFS      KS  R      + + +L++ V A +K         +G    M               G     ++  S+    D   +F  + ++      + +P  C VDMATIVH V P   +       L  WE Y+ ++VD  L+  CSR+G+ L G V+   LCFDKR  VP  K+FAH  R          GAK K      K K+G       P++  A   F L  +TPP  EW EF  +RQNRD V ++LCQYIR +L +I +++A G       H ++ ++LR+DGEP+ + DF+ T  Y SW+              D DG+   +    +NG GE E+QALHH + V     S           V+   RVE++SVDTDVW+AALL  A +P T+NV VVVR Q G+        +D+L+LF+ +  LT WP  FTPLQ+CLPV+AAY+LCGTDFTPT    TS  MF SY++  KN  N  F++ LG+   + G   G+ L+R+E +KFV L YF K +  F  P PG QV          G  D TK W++ I   T  A Y   + ++ A +YDV++L V RMEW+  YWLS     +A       YP+ VPE++N GY++D E    D    M +RR P VT+ PG G+  V+C C    G   C  C+C ++G   CS+ C C
Sbjct:  599 PFRLQSESGRTEIISADGRTALKVLEESMLAAPETLAQMWENGVKGEYVQLNPDRSDRDAPRKQVRLPTFSSAPEGRKSNTRVSSKAARHIGDLKQYVAALSKSRTGGTPIVAGPPPQM---------------GDSKGGMQGFSKSKAIDIVNKFAEDAISKPPPADIPVPHTCAVDMATIVHSVPPLAYVASRSRNRLLTWEAYASYIVDRLLWRLCSREGKKLQGRVVRIVLCFDKRAMVPNPKSFAHNARGLFP------GAKSK------KKKSG-------PLYTRAPYRFGLGDKTPPSSEWQEFLKNRQNRDGVCSVLCQYIRRQLGRIRQKKAAGIQLEWAEHCINEMRLRIDGEPLLSPDFSTTTGYKSWY-------------NDVDGAE--IPEEKDNGLGEGELQALHHVYQVCLQQQSREGSREGQEAGVREPVRVEVVSVDTDVWVAALLAYAAHPWTRNVRVVVRKQSGLYDQAAVTCVDVLELFNALTRLTSWPSAFTPLQKCLPVIAAYMLCGTDFTPTFFGFTSFFMFQSYFEYVKNPENHRFLKALGEHAVKDGAVAGVALEREELIKFVALAYFKKYQASFLYP-PGHQVEPIVDPKKRNGAVDETKAWVDAIHVRTSEAAYGQGKVREAAPNYDVLDLCVLRMEWLVEYWLSIVPVSAAGSEPSENYPIAVPEWNNKGYLKDPEV---DGCCKMLLRREPKVTIWPG-GVETVKCRCSDVPGRGQCTSCVCKQKGS-ICSELCKC 1310          
BLAST of mRNA_P-littoralis_Contig868.21.1 vs. uniprot
Match: A0A6H5KUZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ3_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 1.170e-72
Identity = 168/460 (36.52%), Postives = 230/460 (50.00%), Query Frame = 3
Query: 2418 EFFSDRQNRDNVFALLCQYIRIELAKIEKERAGGN-LTPEQLHLSRLKLRVDGEPVPNEDFTETISYSSWHTNNCMTLSGHDNQTDTDGSITGVTGVMENGFGEDEVQALHHAWAVSQT-----------------D*STVKASKRVEIMSVDTDVWIAALLVCAVYPATQNVHVVVRSQRGVGSSKECQHIDLLKLFDEIQALTHWPQEFTPLQRCLPVVAAYILCGTDFTPTLHSLTSRSMFDSYYQAAKNAGNFDFIRGLGKARTEGGVNIGLDLDRKECVKFVGLCYFYKNRKLFKDPTPGRQVSGGGEPDATKPWIEHIVRWTFRAHYSSARWQKVASDYDVIELHVQRMEWVANYWLSSYNSMSA-------YPVKVPEYHNSGYIRDGEKGHEDEVALMHIRRSPAVTLKPGEGIHVVRCNC---KLKEGPRVCVGCICTKEGDGTCSDPCNC 3713
            +F  +RQ+ D VF++LCQYIR +   I  +++    +TP +  L  L+L +DGEP+ ++DF ET+ + SWH              D D  I G  G   NG GE E+QALHHA+ V +T                 +        RVE++S+  DVW+AALL  A+YP  + V VVVR Q G+        ID+L+LF+ +  + +WP  FT LQRCLPV+A+Y+L GTDFTPTL  L+S  MF SY++ AKNA N  F++ LG                                +L +D        G GE D T+ W+E I   T    Y +    K A +YD  EL V RM W+  YWLS   S S        YP++V ++    YI   EK   +   +M +RR P VT+ PG G   V+C C   K K G   C  C+C  +G G CS+ C C
Sbjct:  158 DFLKNRQHHDGVFSVLCQYIRGKFESIRAKKSNNTAMTPWEDCLGNLRLLIDGEPILSQDFLETLHFKSWH-------------NDKDSLIIGDEG---NGIGEGELQALHHAYLVGRTAGPLTGEGGGSSSENNQEGQGETPPVRVEVVSIHRDVWVAALLAYALYPHIRIVRVVVRQQSGLNDEAVVNCIDVLELFEALAKMENWPHSFTGLQRCLPVIASYMLNGTDFTPTLSGLSSFFMFQSYFELAKNAENHQFVKALGT-------------------------------ELIED--------GEGEVDDTRRWVEAIQERTAEKWYGAGNLSKAAPNYDAAELCVLRMSWLVEYWLSVVPSDSPGSDASARYPIQVSKWDGMWYI---EKTEVEGGCMMLMRRFPKVTIWPG-GFETVKCMCSSAKRKRGGH-CTSCVCITKGFGHCSELCKC 557          
BLAST of mRNA_P-littoralis_Contig868.21.1 vs. uniprot
Match: A0A6H5L2D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2D3_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 1.540e-60
Identity = 137/326 (42.02%), Postives = 182/326 (55.83%), Query Frame = 2
Query:    2 GLFFKAKGIGRRGINWLSQHLKITRTDYSMWKIQQNLADYFGSEAEMEKLVPRDGRFVATSWDNLNMDERVDFGANGNIDVIASIGYFHA--DREQAQEIRMAEGSPRTLEFERDFGMDNPRMKATWEQ--RCTDVATFRDALGREAHKKLQGKGPGEGCGGGGQARTSGFRDEISRRRRVGHED----GGRHEAALGQ---------------DGGTLSRKRGV--GRRGRVLVVGDQETFTNMHKAKQAEPRKYGWVLPWIGDWHLLEHTLDVMFRKWGGFGLYKLARACGCYDKKLEGKNYHKRHFAFVAILEALWNACTSEV 904
            GLF K + I R G+++L+ + KI++TD  +WK++  LAD  G+E+EM+KLVP     +A S+DNLN+D    +GA G++D+IA+I YFH    RE+  E++     P TL+F RDFG DN R+   W Q  R       RD++  +   ++Q             AR     D+    R VG ED           LG                DG       G   GRR R ++VGDQETF  +HKAKQ    KY W +PW+GDWHLLEHTLDVMF KWGGFG+  LA+   CY+ KLE K+YH RH  F+ I+EA W AC +EV
Sbjct:   96 GLFLKDQWIQRDGLDFLASNFKISQTDNHLWKLRTRLADILGTESEMKKLVPLTAALMAASFDNLNVDVLRHWGAGGHVDLIAAIAYFHVLKTREKVTELQCV---PPTLDFARDFGPDNERLMEIWGQFRRRVVACVRRDSVKSDGDFEVQ------------VARQ--VIDDAHEERMVGVEDRRVPSDVKATYLGVVKLGTKTLPDIIEYLDGLKQVLHAGAEHGRR-RAVIVGDQETFNLVHKAKQKYEVKYTWAIPWVGDWHLLEHTLDVMFLKWGGFGIMPLAKRSDCYNNKLEKKDYHNRHNVFIGIMEAAWRACVAEV 403          
BLAST of mRNA_P-littoralis_Contig868.21.1 vs. uniprot
Match: A0A6H5KGL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL9_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 6.220e-53
Identity = 124/287 (43.21%), Postives = 163/287 (56.79%), Query Frame = 2
Query:   98 IQQNLADYFGSEAEMEKLVPRDGRFVATSWDNLNMDERVDFGANGNIDVIASIGYFHADREQAQEIRMAEGSPRTLEFERDFGMDNPRMKATWEQ-RCTDVATFRDALGRE--------AHKKLQGKGPGEGCGGGG----QARTSGFRDEISRRRRVGHE-----DGGRHEAALGQDGGTLSRKRGVGRRGRVLVVGDQETFTNMHKAKQAEPRKYGWVLPWIGDWHLLEHTLDVMFRKWGGFGLYKLARACGCYDKKLEGKNYHKRHFAFVAILEALWNACTSEV 904
            ++  LAD  GSE EM+KLVP     VA S+DN+N+D    FG + ++D++A+I Y H    + Q   + +  P+ L F RDFG   PRM  TWE+ R   +A  ++    E        A + ++   P E  G  G    +  T+ +   I    +V  +     DG +H   +G +GG          RGR +V GDQETFT +HKAK+    KY WVLPWIGDWHLLEHTLDV+FRKWGG  +  LA+A   Y KKLE KNYHKR+FAF  ILEALW AC  E+
Sbjct:    1 MRTRLADRLGSEREMKKLVPVCAGLVACSFDNVNLDVNRHFGGSSHVDLVAAIAYHHTSASRRQRAELPQRPPK-LNFVRDFGTSEPRMVLTWERFRAQVLACVQERAVEEDGDFEVRLARRVIRDAAPEERVGVEGRRIPEEVTTKYLGVIDVTTKVVKDIVTFLDGLQHVIHIGAEGG----------RGRAVVAGDQETFTLVHKAKKQFGAKYDWVLPWIGDWHLLEHTLDVLFRKWGGGCIIPLAKAADAYTKKLESKNYHKRYFAFRRILEALWGACVGEI 276          
BLAST of mRNA_P-littoralis_Contig868.21.1 vs. uniprot
Match: A0A6H5KRV8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV8_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 5.720e-49
Identity = 129/337 (38.28%), Postives = 182/337 (54.01%), Query Frame = 3
Query: 2214 VPPVKTFAHAVRFTTGKKTGEGGAKGKRGTHAYKTKNGKRNVRQEPVWEPAKRSFNLLSETPPEKEWGEFFSDRQNRDNVFALLCQYIRIELAKIEKERAGG-NLTPEQLHLSRLKLRVDGEPVPNEDFTETISYSSWHTNNCMTLSGHDNQTDTDGSITGVTGVMENGFGEDEVQALHHAWAVSQTD*S----------------TVKASKRVEIMSVDTDVWIAALLVCAVYPATQNVHVVVRSQRGVGSSKECQHIDLLKLFDEIQALTHWPQEFTPLQRCLPVVAAYILCGTDFTPTLHSLTSRSMFDSYYQAAKNAGNFDFIRGLGKARTEG 3173
            VP  K+F H  R   G+  G   A  KR  H   +K  K     +P++  A   F +  +TP   EW  F  DRQ+RD VF+ LC++IR +   I K+ + G  L   +  L RL+L VDGEPV   D++ T SY SW+           N  + D     +  +  NG GE E+QALHHA+   + +                  T +    VE++SVDTDVW+AALL  AV+P+T++V ++VR Q GV  +     ID+LKL  ++ A+  WP  FT LQR L +V+A++L GTDFTP+L   T+ SMF +Y  A K+AGN +F+  LG  + EG
Sbjct:  709 VPTPKSFVHVTR---GQSAGPS-AGAKRKNHKLHSKK-KPRAPPQPLFTKAPTGFEIGDKTPDAAEWQTFLEDRQHRDGVFSALCKFIRHQYDTIRKKTSDGVGLEYGESCLQRLQLEVDGEPVLFSDYSRTKSYLSWY-----------NTKELD-----IILLEANGIGEGELQALHHAYMTGKNNKESRGQGGEVREGGVVVPTSEDPVTVEVVSVDTDVWMAALLAYAVHPSTRDVRIIVRQQSGVTGNTYVNCIDVLKLLQDLSAMRFWPSSFTNLQRVLSIVSAFVLNGTDFTPSLSGFTASSMFQAY-NALKDAGNHNFVLPLGSEQREG 1023          
BLAST of mRNA_P-littoralis_Contig868.21.1 vs. uniprot
Match: A0A6H5JCT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT7_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.540e-43
Identity = 112/301 (37.21%), Postives = 154/301 (51.16%), Query Frame = 2
Query:    5 LFFKAKGIGRRGINWLSQHLKITRTDYSMWKIQQNLADYFGSEAEMEKLVPRDGRFVATSWDNLNMDERVDFGANGNIDVIASIGYFHADREQAQEIRMAEGSPRTLEFERDFGMDNPRMKATWEQRCTDVATFRDALGREAHKKLQGKGPGEGCGGGGQARTSGFRDEISRRRRVGHEDGGRHEAALGQDGGTLSRKRGVGRRGRVLVVGDQETFTNMHKAKQAEPRKYGWVLPWIGDWHLLEHTLDVMFRKWGGFGLYKLARACGCYDKKLEGKNYHKRHFAFVAILEALWNACTSEVN 907
            +F K++GI R  +++L++  KI +TD  ++K+Q+ LAD  G++ EM K VP     VA S+DNLN+D    +G  G++D+IA+I YF A  +  Q++       R L F RDFG D+PR+   WE    +V +      R+ + K  G                   D   R  +V   D  R                GVG R   L       F    K       + GW    +  WHLLEHTLDV++RKWGGF +  LA+A  C+DKKLE KNYHKRH  FV ++EA+W AC SEVN
Sbjct:  152 IFLKSRGIQRDWLDFLARTFKIAQTDSYVYKVQKKLADSLGTKEEMLKRVPLSEGLVACSFDNLNLDVLRHWGKGGHVDLIAAIAYF-AVSQSRQKVTSLRSERRKLGFRRDFGQDHPRILGIWESFRLNVVS----CARKPYTKTDG-------------------DFEMRLAKVIIHDAPRKSML------------GVGIRRPTL-------FCTRRKPNTLRSLR-GWCRGSVIGWHLLEHTLDVLYRKWGGFAMIPLAKASDCHDKKLESKNYHKRHNVFVGVVEAVWQACISEVN 408          
BLAST of mRNA_P-littoralis_Contig868.21.1 vs. uniprot
Match: A0A6H5L7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Q2_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 1.720e-41
Identity = 96/203 (47.29%), Postives = 125/203 (61.58%), Query Frame = 1
Query:  937 GGAVSPGERLLRKLKIFLDGK-KHKTFGQWVDLLLRDGMAYLALYTSIRVGDFELREAAIQMVGPLFLAYNKNLYHALCIHHLVDMARLSENELAFATAITSLSLKGNVGKNSGLDEIQEITFNLYMKVMATRLNIDYLSSLSPTLQCKSRSVATFETEFDCGLSRKRKLLRNARRTRAVGFMYSELRRDGSPFRLDNKEGEE 1542
            GG     E LL  L  + D + KHKTFGQW D LL DGMAYLA+Y  IR GDF+LREAAI+ + PLFL YNKNL HALCI HL D+ARLS  E  F +   SLS  G  GKN+GLDEIQE+T N  +K  AT  ++ YL  L+ TLQ         +  +   +   RK+  +  R + V  +++ L  +GSPF+L +++G +
Sbjct:  249 GGMRLSDEELLANLLGYRDNQTKHKTFGQWADFLLSDGMAYLAVYIGIRTGDFDLREAAIRKIAPLFLGYNKNLCHALCIQHLADIARLSPAERLFISETFSLSRSGKPGKNTGLDEIQEMTMNKDIKQAATGTDVRYLQRLNLTLQTLPTVAREVKEMYGSSVIYNRKIYASDHRRKIVDKIHASLVAEGSPFKLRDEKGAQ 451          
BLAST of mRNA_P-littoralis_Contig868.21.1 vs. uniprot
Match: A0A6H5JPG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPG5_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 4.200e-37
Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 1
Query:  937 GGAVSPGERLLRKLKIFLDGKKHKTFGQWVDLLLRDGMAYLALYTSIRVGDFELREAAIQMVGPLFLAYNKNLYHALCIHHLVDMARLSENELAFATAITSLSLKGNVGKNSGLDEIQEITFNLYMKVMATRLNIDYLSSLSPTLQCKSRSVATFETEFDCGLSRKRKLLRNARRTRAVGFMYSEL 1494
            GG ++  E L   L   +D  KHKTFGQW DLLL DGMAYLA+Y  IR  DF+LREAAI+ + PLFL YNKNLYHALCI +L D+ARLS  E  F +   SLSL   +  NSGL EIQ++     +K   T  ++ +L  L+ TLQ  S      +  +   +   RK+  +  R + V  +++ L
Sbjct:  123 GGRLADEELLANLLGYRIDRTKHKTFGQWADLLLSDGMAYLAVYIGIRTEDFDLREAAIRKIAPLFLGYNKNLYHALCIQYLADIARLSPAERLFISETFSLSLSEKLSNNSGLGEIQKMIMTKDIKQAPTGTDVRHLQRLTLTLQTLSTVAREVKEMYGSSVIYNRKIYASGHRRKIVDRIHASL 308          
BLAST of mRNA_P-littoralis_Contig868.21.1 vs. uniprot
Match: A0A6H5KUA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA8_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 9.150e-34
Identity = 64/118 (54.24%), Postives = 87/118 (73.73%), Query Frame = 3
Query: 2802 VEIMSVDTDVWIAALLVCAVYPATQNVHVVVRSQRGVGSSKECQHIDLLKLFDEIQALTHWPQEFTPLQRCLPVVAAYILCGTDFTPTLHSLTSRSMFDSYYQAAKNAGNFDFIRGLG 3155
            VE+ SVDTDVWIAALL  AV+P+T++V ++VR Q G+  +     IDLLKLF ++ A+ +WP  FT LQ  LP+++AY+L GTD+TPTL  LT+ SMF +YY A K+AGN +F+  LG
Sbjct:   10 VEVFSVDTDVWIAALLSYAVHPSTRDVRIIVRQQSGMAVNTNVHCIDLLKLFQDLTAMRNWPSSFTKLQSVLPIISAYVLNGTDYTPTLSGLTASSMFQAYYDALKDAGNHNFVLPLG 127          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig868.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JBA3_9PHAE3.840e-12835.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQE5_9PHAE1.360e-12436.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUZ3_9PHAE1.170e-7236.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2D3_9PHAE1.540e-6042.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGL9_9PHAE6.220e-5343.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRV8_9PHAE5.720e-4938.28Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JCT7_9PHAE1.540e-4337.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Q2_9PHAE1.720e-4147.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPG5_9PHAE4.200e-3744.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUA8_9PHAE9.150e-3454.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig868contigP-littoralis_Contig868:89517..93536 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog400682.PAC_15716921
Model size3817
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.76e-09
EggNOG OGs2D5KK@1|root,2SYVY@2759|Eukaryota
Cds size657
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791741.2812312-UTR-P-littoralis_Contig868:89516..906571680791741.2812312-UTR-P-littoralis_Contig868:89516..90657Pylaiella littoralis U1_48UTRP-littoralis_Contig868 89517..90657 -
1680791741.2970033-UTR-P-littoralis_Contig868:90813..917851680791741.2970033-UTR-P-littoralis_Contig868:90813..91785Pylaiella littoralis U1_48UTRP-littoralis_Contig868 90814..91785 -
1680791741.3219252-UTR-P-littoralis_Contig868:92442..930851680791741.3219252-UTR-P-littoralis_Contig868:92442..93085Pylaiella littoralis U1_48UTRP-littoralis_Contig868 92443..93085 -
1680791741.3321884-UTR-P-littoralis_Contig868:93132..935361680791741.3321884-UTR-P-littoralis_Contig868:93132..93536Pylaiella littoralis U1_48UTRP-littoralis_Contig868 93133..93536 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791741.3079307-CDS-P-littoralis_Contig868:91785..924421680791741.3079307-CDS-P-littoralis_Contig868:91785..92442Pylaiella littoralis U1_48CDSP-littoralis_Contig868 91786..92442 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig868.21.1prot_P-littoralis_Contig868.21.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig868 91786..92442 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig868.21.1

>prot_P-littoralis_Contig868.21.1 ID=prot_P-littoralis_Contig868.21.1|Name=mRNA_P-littoralis_Contig868.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=219bp
MAYLALYTSIRVGDFELREAAIQMVGPLFLAYNKNLYHALCIHHLVDMAR
LSENELAFATAITSLSLKGNVGKNSGLDEIQEITFNLYMKVMATRLNIDY
LSSLSPTLQCKSRSVATFETEFDCGLSRKRKLLRNARRTRAVGFMYSELR
RDGSPFRLDNKEGEEKYSPGMVVWPNQTSKRRCSAPALLQRKYSEMESAT
LYLMSAGSLGTDKEWRNG*
back to top

mRNA from alignment at P-littoralis_Contig868:89517..93536-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig868.21.1 ID=mRNA_P-littoralis_Contig868.21.1|Name=mRNA_P-littoralis_Contig868.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4020bp|location=Sequence derived from alignment at P-littoralis_Contig868:89517..93536- (Pylaiella littoralis U1_48)
CGGCCTCTTCTTTAAGGCGAAAGGAATAGGCAGAAGGGGTATCAATTGGC TTTCTCAACACTTGAAGATAACACGCACGGACTATTCCATGTGGAAGATA CAACAGAATTTGGCAGATTATTTCGGCAGTGAAGCCGAAATGGAAAAGCT GGTCCCACGAGATGGCCGATTTGTAGCCACGAGCTGGGATAATCTGAACA TGGACGAACGTGTCGACTTTGGGGCAAATGGTAATATTGATGTCATCGCG AGCATTGGGTACTTCCACGCCGATCGGGAGCAGGCTCAAGAAATACGTAT GGCCGAGGGCTCACCGCGAACGTTGGAGTTCGAACGAGACTTTGGCATGG ATAACCCTAGGATGAAGGCAACCTGGGAGCAGCGGTGTACGGATGTCGCC ACGTCTGCGATGGACGTAATCACCGAGGCCATCGTAAAGAAGAACGGCGA CTTCGAGATGCGCTTGGCCGCGAAGCACATAAAAAATTGCAAGGAAAGGG ACCCGGGGAAGGTTGTGGGGGTGGAGGGCAGGCGCGTACCAGTGGATTTC GTGATGAGATTTCTCGGCGTAGAAGAGTTGGGCACGAAGACGGTGGGCGA CACGAAGCAGCTCTTGGACAAGATGGAGGGACGCTGTCACGTAAACGTGG GGTAGGTAGGCGTGGGAGGGTGTTGGTGGTAGGAGACCAGGAGACCTTTA CAAACATGCACAAGGCCAAACAAGCTGAGCCCCGAAAGTACGGGTGGGTG CTGCCGTGGATAGGCGACTGGCACCTATTAGAGCACACGCTAGACGTCAT GTTCCGAAAATGGGGGGGGTTCGGCTTGTACAAACTCGCTCGGGCTTGTG GATGCTACGACAAGAAGCTGGAGGGAAAAAATTATCACAAGCGGCACTTC GCTTTCGTCGCGATATTGGAGGCGTTGTGGAACGCGTGCACATCTGAAGT GAACCACCTTCCTGACGAGGGCCGGGGTTGGAGGGCGGTGCCGTCTCGCC GGGGGAGCGCCTTCTACGAAAGCTGAAGATTTTTCTCGACGGAAAAAAAC ACAAGACGTTCGGACAGTGGGTAGACCTCCTGCTCCGCGACGGTATGGCA TATCTCGCGCTGTACACAAGTATTCGCGTGGGCGACTTCGAGTTGCGCGA AGCTGCAATCCAAATGGTTGGACCTCTTTTTCTAGCGTACAACAAGAATT TGTACCACGCTTTGTGCATCCACCACCTCGTCGACATGGCGAGATTGTCT GAAAATGAACTTGCCTTCGCGACTGCAATCACCAGTTTATCTCTGAAGGG GAACGTCGGTAAAAATTCAGGCTTGGATGAGATTCAGGAGATTACGTTCA ACTTGTACATGAAGGTCATGGCTACTAGGCTCAACATCGACTATCTGTCC AGCCTGTCGCCGACCCTGCAGTGCAAGTCTCGATCCGTGGCGACGTTCGA GACGGAGTTTGATTGCGGGCTGTCGCGAAAGCGAAAGCTGTTGAGAAACG CCAGAAGAACACGCGCAGTGGGCTTTATGTATTCAGAGCTTCGTCGCGAT GGCAGCCCGTTCAGGCTGGACAACAAGGAGGGCGAAGAAAAATACTCGCC CGGGATGGTCGTGTGGCCAAACCAAACCTCGAAGAGGCGTTGCTCCGCGC CCGCGCTACTTCAGAGAAAATATTCAGAGATGGAATCTGCAACCTTGTAC CTGATGTCCGCCGGCTCCTTGGGGACGGACAAGGAATGGCGAAACGGGTG AAACGTCCGACTTTCTCCGACGGAATTACCAAAAACAAATCGAAGCCAAG AGCCCAAGTGGTGATCAATAAGCGAGTGGAGAATCTAGAGAAAATAGTTA TTGCGCAGGCAAAGGAGATGCAGAAGGCAGTTGGGAACCAAAGCGGATCA GCCTCCAACATGAATGCCCCCTTTTGGTGTCCGGGATACCTGATCAAATG GGTTTTCGGGGCACTTGCACGGGATATCGAAATCCAAAGCGAAGGCCATC GCCACGACACACGCGTCCAGTTCAATGGTAACTGTGTCACCCATAAGAGC TTGCACATACCGGACGTCTGCCCCGTCGACATGGCGACAATAGTCCACCA AGTGGCACCCAGGCAAGTTATCGACGGGACGTTTGTGCGGCACCTAAAAA TGTGGGAAATGTATTCCAAATTTTTGGTCGACAACTTTTTGTATGCAACG TGTTCAAGACAAGGCGAGCTCGGCGGCGAAGTGATCTTGTGCTTCGATAA GCGCCAATACGTCCCGCCGGTGAAGACCTTTGCCCACGCCGTCCGTTTCA CCACCGGAAAAAAAACGGGGGAGGGGGGAGCGAAAGGGAAGAGGGGCACG CATGCATACAAAACCAAGAACGGAAAGAGAAACGTCAGGCAAGAGCCTGT GTGGGAACCGGCGAAGCGGTCCTTCAATCTGCTGAGCGAGACCCCGCCGG AGAAGGAGTGGGGTGAATTTTTCTCCGATCGCCAGAACCGCGACAACGTC TTCGCACTTTTGTGCCAGTACATCCGCATAGAACTGGCCAAGATCGAAAA GGAGAGAGCAGGCGGTAACCTCACGCCTGAACAACTGCACCTCAGCCGCC TTAAGTTGCGAGTCGACGGCGAGCCTGTGCCCAACGAAGATTTCACGGAG ACGATCTCCTATTCGTCATGGCACACCAACAACTGCATGACGTTGTCAGG GCACGACAACCAGACAGACACAGGTACGGCGGTGCAGCGTACGCTGTGCG AGTGCAGTGTTTGGCATAAGGGGCGAATGGTACTCTCTATTGTCTTGTCC CATGCGCCCGTATATTCTCTCATGACCCAGGTCAACCACTTTTTTTTTCC GTCTCCCACAATTTTTTCGCCCTTATCAGATGGCAGCATTACAGGCGTCA CGGGGGTCATGGAGAACGGGTTTGGGGAGGATGAAGTACAAGCGCTCCAC CACGCTTGGGCGGTTTCCCAAACCGATTAAAGTACCGTCAAAGCCAGTAA GCGAGTGGAAATTATGTCTGTGGATACGGATGTATGGATAGCCGCGCTTC TCGTCTGCGCGGTATACCCGGCGACTCAGAATGTGCACGTCGTGGTGCGC TCGCAGCGAGGGGTCGGCAGCTCAAAAGAATGCCAGCACATTGACCTGCT GAAACTCTTCGACGAAATCCAGGCCTTGACCCATTGGCCGCAGGAGTTCA CCCCGCTTCAACGGTGCTTGCCGGTGGTTGCAGCCTACATTCTCTGCGGT ACAGACTTCACACCCACGCTACACTCGCTGACCTCCCGAAGCATGTTCGA CTCGTACTACCAAGCTGCGAAGAACGCCGGCAATTTTGATTTCATTCGGG GTCTTGGTAAAGCAAGAACAGAGGGAGGCGTTAACATCGGCTTGGACTTA GATCGCAAAGAGTGTGTAAAGTTTGTGGGACTTTGCTACTTCTACAAAAA TCGTAAACTTTTTAAAGACCCGACACCTGGCCGGCAGGTTAGTGGGGGGG GTGAGCCCGATGCCACAAAGCCGTGGATAGAGCACATAGTTAGGTGGACT TTTCGTGCGCATTATTCATCCGCGCGTTGGCAGAAGGTTGCGTCAGACTA TGACGTCATTGAGCTTCACGTCCAACGGATGGAATGGGTTGCTAATTACT GGCTGTCATCATACAATTCGATGAGTGCTTATCCTGTAAAAGTACCAGAG TACCATAATTCGGGGTACATCAGGGATGGGGAGAAAGGGCACGAAGACGA GGTAGCCTTGATGCACATTCGCCGTTCACCTGCGGTGACTCTGAAGCCCG GCGAGGGGATTCACGTAGTAAGGTGCAATTGTAAATTAAAGGAGGGACCA CGTGTGTGTGTGGGTTGCATATGCACAAAGGAGGGCGATGGAACTTGCTC CGACCCATGTAACTGCGCCGGTAAATACGGGAACGGGAGCGCTCCTGGTG GAAGCAACCTATTGTCTAGCGCAAACGTTGGGCAAGGTGCAGCTGGGGCA GGTGTGGGGCTAAGAGGGGC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig868:89517..93536-

>mRNA_P-littoralis_Contig868.21.1 ID=mRNA_P-littoralis_Contig868.21.1|Name=mRNA_P-littoralis_Contig868.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=657bp|location=Sequence derived from alignment at P-littoralis_Contig868:89517..93536- (Pylaiella littoralis U1_48)
ATGGCATATCTCGCGCTGTACACAAGTATTCGCGTGGGCGACTTCGAGTT
GCGCGAAGCTGCAATCCAAATGGTTGGACCTCTTTTTCTAGCGTACAACA
AGAATTTGTACCACGCTTTGTGCATCCACCACCTCGTCGACATGGCGAGA
TTGTCTGAAAATGAACTTGCCTTCGCGACTGCAATCACCAGTTTATCTCT
GAAGGGGAACGTCGGTAAAAATTCAGGCTTGGATGAGATTCAGGAGATTA
CGTTCAACTTGTACATGAAGGTCATGGCTACTAGGCTCAACATCGACTAT
CTGTCCAGCCTGTCGCCGACCCTGCAGTGCAAGTCTCGATCCGTGGCGAC
GTTCGAGACGGAGTTTGATTGCGGGCTGTCGCGAAAGCGAAAGCTGTTGA
GAAACGCCAGAAGAACACGCGCAGTGGGCTTTATGTATTCAGAGCTTCGT
CGCGATGGCAGCCCGTTCAGGCTGGACAACAAGGAGGGCGAAGAAAAATA
CTCGCCCGGGATGGTCGTGTGGCCAAACCAAACCTCGAAGAGGCGTTGCT
CCGCGCCCGCGCTACTTCAGAGAAAATATTCAGAGATGGAATCTGCAACC
TTGTACCTGATGTCCGCCGGCTCCTTGGGGACGGACAAGGAATGGCGAAA
CGGGTGA
back to top