prot_P-littoralis_Contig120.69.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig120.69.1
Unique Nameprot_P-littoralis_Contig120.69.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length81
Homology
BLAST of mRNA_P-littoralis_Contig120.69.1 vs. uniprot
Match: A0A6H5JZ11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ11_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 4.320e-24
Identity = 44/79 (55.70%), Postives = 59/79 (74.68%), Query Frame = 0
Query:    2 FTVAGDKVLVTAFEHNPVAHLVLGEGRHLCALVADSASSDRLEKSLDVACTSGVKSGWFKEYTGADVIVGGNALPAVIP 80
            F VAGD VLVTAF+ NP+A LVLG GR LCALVAD +  D ++K++D ACT  ++ GWF E   A+VI+ G+ LP+++P
Sbjct:    6 FAVAGDSVLVTAFDENPIAPLVLGNGRTLCALVADMSKKDDVDKAVDAACTDAMRHGWFAELCKANVIISGSTLPSIVP 84          
BLAST of mRNA_P-littoralis_Contig120.69.1 vs. uniprot
Match: D8LKD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD6_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 2.100e-19
Identity = 44/80 (55.00%), Postives = 55/80 (68.75%), Query Frame = 0
Query:    1 RFTVAGDKVLVTAFEHNPVAHLVLGEGRHLCALVADSASSDRLEKSLDVACTSGVKSGWFKEYTGADVIVGGNALPAVIP 80
            RFTV GD VLVT FE NP+A LVLG+GRHL ALVADS  ++  E  ++ AC +  K GWF E    +VI+ G+ LP+ IP
Sbjct:  240 RFTVPGDCVLVTTFEENPLASLVLGQGRHLGALVADSTKAENAEVEVNEACVTATKHGWFAELNKTEVIMTGSTLPSCIP 319          
BLAST of mRNA_P-littoralis_Contig120.69.1 vs. uniprot
Match: A0A6H5LCY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCY2_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 3.700e-13
Identity = 39/80 (48.75%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    1 RFTVAGDKVLVTAFEHNPVAHLVLGEGRHLCALVADSASSDRLEKSLDVACTSGVKSGWFKEYTGADVIVGGNALPAVIP 80
            RFT AGDKVLV+AFE N +A LVL  GR L ALV D A +  + + +  A  + + +GWFK    A V +GG+ LPA  P
Sbjct:  705 RFTSAGDKVLVSAFEDNNLASLVLTSGRRLFALVGDPAKAVSVGRQVKSALATAMTAGWFKALANAGVPLGGSVLPAGFP 784          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig120.69.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZ11_9PHAE4.320e-2455.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKD6_ECTSI2.100e-1955.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCY2_9PHAE3.700e-1348.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig120contigP-littoralis_Contig120:405984..406226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig120.69.1mRNA_P-littoralis_Contig120.69.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig120 405983..406226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig120.69.1 ID=prot_P-littoralis_Contig120.69.1|Name=mRNA_P-littoralis_Contig120.69.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=81bp
RFTVAGDKVLVTAFEHNPVAHLVLGEGRHLCALVADSASSDRLEKSLDVA
CTSGVKSGWFKEYTGADVIVGGNALPAVIPP
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