prot_P-littoralis_Contig863.10.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig863.10.1
Unique Nameprot_P-littoralis_Contig863.10.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length144
Homology
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BLAST of mRNA_P-littoralis_Contig863.10.1 vs. uniprot
Match: D7G3R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3R8_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 6.670e-10
Identity = 40/74 (54.05%), Postives = 50/74 (67.57%), Query Frame = 0 
Query:   72 ALSAQPVNSPQKSSAGQTV--RRSKRRLRIVDNYGDDSDYGLPEEESESEDEKLNVTAARRVSSKKPKCGGGDP 143
            A + +P  SP   + G+T    RS +RL++VDN GDDS + LPEEESE E     V AA+ VSSKKPKCGGG+P
Sbjct:   35 ASTRRPPFSPTSPNTGRTPPRARSTKRLQLVDNDGDDSVWSLPEEESEGE----QVPAAKGVSSKKPKCGGGNP 104
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig863.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3R8_ECTSI6.670e-1054.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig863contigP-littoralis_Contig863:55059..57772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig863.10.1mRNA_P-littoralis_Contig863.10.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig863 54245..58594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig863.10.1 ID=prot_P-littoralis_Contig863.10.1|Name=mRNA_P-littoralis_Contig863.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=144bp
MCSTPPKSGKRGGGVSNDGECDEIPLFGKGSPVVAQGVNGDDANDIDVDV
EGGGEDRQEEVEKSRASPTPGALSAQPVNSPQKSSAGQTVRRSKRRLRIV
DNYGDDSDYGLPEEESESEDEKLNVTAARRVSSKKPKCGGGDP*
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