prot_P-littoralis_Contig862.4.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig862.4.5
Unique Nameprot_P-littoralis_Contig862.4.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length333
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig862.4.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 149..172
e-value: 0.0023
score: 27.2
coord: 100..124
e-value: 110.0
score: 4.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 41..224
e-value: 1.6E-26
score: 95.0
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 130..184
e-value: 4.3E-12
score: 45.6
NoneNo IPR availablePANTHERPTHR24369ANTIGEN BSP, PUTATIVE-RELATEDcoord: 77..239
NoneNo IPR availablePANTHERPTHR24369:SF155ANTIGEN BSP, PUTATIVE-RELATEDcoord: 17..183
NoneNo IPR availablePANTHERPTHR24369:SF155ANTIGEN BSP, PUTATIVE-RELATEDcoord: 77..239
NoneNo IPR availablePANTHERPTHR24369ANTIGEN BSP, PUTATIVE-RELATEDcoord: 17..183
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 76..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig862contigP-littoralis_Contig862:84199..91774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig862.4.5mRNA_P-littoralis_Contig862.4.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig862 70156..92623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig862.4.5 ID=prot_P-littoralis_Contig862.4.5|Name=mRNA_P-littoralis_Contig862.4.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=333bp
MISSSCSSWVKPVMAAALLISRANGLNTCLDPSSNMYTCVPGMTEITFFH
SSTGCDGLVDGDMPDLQACFDTMGRSGLEDISITGNTELTSIPEDLFEGM
GNLKNLRISTNEMLGSLPEGLFKDNAALIDLNLMRDGLTALPVAIFEGLS
NVEELRLQYNSLTTVPAGVFAPLTSLEELYLHGDEMMNMQCLPASTADYI
RLNTGATTERGTCGCTPEDAVSCPEGTTCSSGTEGYTCGDGQSPTPSVGS
PLPVVSTSTVDEPTCSNGLPGYEAFSGENHVCCPVGCNGCGGSNCSKIGK
EAGLTRADCCTGGVLSNQVYCSASGAAPCIIT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt