prot_P-littoralis_Contig862.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig862.2.1
Unique Nameprot_P-littoralis_Contig862.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length115
Homology
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BLAST of mRNA_P-littoralis_Contig862.2.1 vs. uniprot
Match: A0A6H5KHU9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHU9_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.250e-9
Identity = 39/106 (36.79%), Postives = 50/106 (47.17%), Query Frame = 0 
Query:   20 GLVSMMDRECLLAMLSAHAAVDSR------PGVGEFGGNKE------------SGDGGGLPKGFLARLASAVDLQGAVAGDRPSPEPPDFPHCSASDLRLPKHYNE 107
            GL+SM+D+  L++ML A  AV+         G+GE                     GGGLP      LA   D+   +   RP  + PD PHC ASDLR+PK YNE
Sbjct:  564 GLISMLDKNTLVSMLEAQRAVEEERREPGGAGIGEXXXXXXXXXXXALAAVGLGAGGGGLPLVCATLLADREDIDAMLRNQRPPKQRPDLPHCQASDLRIPKSYNE 669
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig862.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KHU9_9PHAE1.250e-936.79Integrase catalytic domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig862contigP-littoralis_Contig862:30559..35490 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig862.2.1mRNA_P-littoralis_Contig862.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig862 30390..35513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig862.2.1 ID=prot_P-littoralis_Contig862.2.1|Name=mRNA_P-littoralis_Contig862.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=115bp
MLAEAPPEIDDDDDLSGQMGLVSMMDRECLLAMLSAHAAVDSRPGVGEFG
GNKESGDGGGLPKGFLARLASAVDLQGAVAGDRPSPEPPDFPHCSASDLR
LPKHYNEGCGCRVF*
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