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Homology
BLAST of mRNA_P-littoralis_Contig86.149.10 vs. uniprot
Match: A0A6H5JG01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG01_9PHAE) HSP 1 Score: 865 bits (2235), Expect = 7.130e-297 Identity = 543/1015 (53.50%), Postives = 628/1015 (61.87%), Query Frame = 1
Query: 109 MLRGKKGNILARSVCYPRQHTTVFEGAPIVSGSAAVLLGDVDNDPQSEIELAVAGVNGTLAVFKTGHPTPGPYFEASGLGTLSALGLGKLFLGYGDDQQQLIACTEEGVCHIFNIRPADIKWDQESDTTGRVAPVWSVTCPTNVTSCCIADIDGDKMQEVVMGTREGGVHVLKMNFNREEDSC------------------------SDVLSLSSAAQSRPPTPAFEEHGLEHAVELVAPDVDRSDATLASTGIPGEHSMDPLEVHHVESRKSLATPDNTSAPGIGAPSDQAVPLSPHLKSLLELKAQDAVTSLSIIYVPETAADAAXXXXXXXXXXXXXXXEARAD-ETENVGGD-RG---------SPVAGEAASGLNLRAAEKMEV-ASAAGVYVAVGLETGAMEVMRLSSRRAGTRVFDLAKASDRFDRSSSSCDATVAS-SRAGNDGPAAGSASGDNLSRPVSGDQNENRRPCRERVVVPRPPDSPSHTPD-EFDDGLARRLRLDRDEVELAEGALSGAAAASTTVAAATVGPMASALCGWHVPPDCKSSDSWAGRGLVVGFSDTKVATHPFAATPKTPLDHTFSNAPRRGWGMIS-ESVGGGRSGGKTGGGNEQQVFAVCTMDGCVRCCRIVSTPEGQPQWKHLWTRQTKEALHSFHRLDCPVGLDSRGQVEEERG---SLIVLCSWSGNTFIFDAEGTPCVAFDAEPYLAGPLTAFVAGNLTTLSSLAGPSLVYLGTEGKVVAYHGLLGQRDSMVPAQQFIPSLQKDGSIDTLRELLTILANLLQWRSNQGDL-LFPPTFPPPEARPAGDKELDDIASNAGSDAXXXXXXXXXXXXXEVDAADALSDDE-NIALSLPDEVLARAVLCPSGVVVALASTARREDRRKNTADGGEGGSGVDDHRWRREVHALAKGHGGTITVGEGAAAVERVLREIKAWETRGR---------------EPTLKNFPCLRGTLEGLTAWGSGPRRESLRRFSLQDQTCGYATEVPLSAPG 2976
M R K ++LAR+VC RQ TTVFEGAP+VSGSAAVLLGDVDNDPQ+E ELAV GV+GTLAVFK GHPTPGPYF ASGLGTLSALGLGKLFLGYGDDQQ LIACTEEGVCHIFNIRPAD+KWD ESDT GRV PVWSV CP NVTSCCIADIDGDKMQEVVMGTREGGVHVLK++FN+E+ SDV S AAQSR TP +E GLE +A D D SDAT P S P + + E RKS+ TPD+T+APG+ A Q LSPHLK LLELKAQDAVTSLSI++VPE ++ + A+AD ++NV G RG P G + + ME ASAAGVYVAVGL+TG +EVMRLSS+R GTR+ DL AS+R DR SS DA A+ S DG AAG G LSR +S D + R +P + RLRLDRDEV E + AAA+ A G +AS LCGWHVP D S+DSWAGRGLVVGFSDT+ T PFA TP+TPL HT N P RGWG + E VG G S +TG G+ +Q EALHSF RLD E E G SL V+CSWSGNT +FDAEG PC FDAE +L GPLTAFVAG+LTT S GPSLVYLG EGKVVAYHGL Q +S PAQ FIP L KDGS+D L++LLT LAN LQWRS++ L LFP + PPP+A+PA + E + GS AA+ SDDE + ALSL D +L RAVLC SG+VVAL STARR +RRK+TAD G DD RWRRE+ ALA+G G TITVGEGAAA++RVL+E++AW+TRGR EPTL +FPCLRGTLE L+ WGSGPRR+SLR + + AT ++PG
Sbjct: 1 MPRFYKDSVLARTVCQSRQQTTVFEGAPVVSGSAAVLLGDVDNDPQAERELAVGGVDGTLAVFKVGHPTPGPYFMASGLGTLSALGLGKLFLGYGDDQQ-LIACTEEGVCHIFNIRPADLKWDPESDT-GRVNPVWSVPCPKNVTSCCIADIDGDKMQEVVMGTREGGVHVLKIDFNQEQHKGKDEGVKTTEKSGWAGGVSTGDTPRSDVFCSSPAAQSRHSTPTADEPGLER----LAQDGDESDATPNPVRGP---STGPSKSAYWEDRKSMETPDSTNAPGVVAADTQPFSLSPHLKPLLELKAQDAVTSLSIVFVPEISSMPSTSITSRSGEGVAPPATAQADGNSDNVDGSGRGLTTCPPHEDRPQGGSGSMPALASRTDVMEQGASAAGVYVAVGLDTGVVEVMRLSSQRVGTRILDLVIASERSDRLSSISDAAAAADSHPAADGSAAGDTLGGGLSR-LSSDDRDAHVCLRSETSASQPAAEGGPAAKLSGESNTMSRLRLDRDEVGNQEKRVLPGAAAAAVATATAAGLVASVLCGWHVPADSPSADSWAGRGLVVGFSDTEAGTSPFAETPRTPLGHTSGNVPTRGWGSKTIEGVGAGASSSQTGSGDGRQ-----------------------------------EALHSFQRLDF----------EHEEGGTESLFVVCSWSGNTLMFDAEGMPCAGFDAEAHLPGPLTAFVAGDLTTPSGSTGPSLVYLGAEGKVVAYHGLPEQIESATPAQ-FIPILVKDGSMDKLKDLLTSLANRLQWRSSEQALPLFPSSTPPPDAQPADESECVQLEDGTGSSGPAEVATAAA-------AANIFSDDEPDAALSLSDAILTRAVLCSSGLVVALGSTARRNERRKSTADCGA--CSFDDARWRREMRALAEGEGSTITVGEGAAAIDRVLKEMQAWQTRGRGSERPVRPLSPLLPAEPTLTHFPCLRGTLEALSCWGSGPRRDSLRSALKESK----ATAEVFASPG 946
BLAST of mRNA_P-littoralis_Contig86.149.10 vs. uniprot
Match: D8LTG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG0_ECTSI) HSP 1 Score: 444 bits (1143), Expect = 8.820e-140 Identity = 294/610 (48.20%), Postives = 347/610 (56.89%), Query Frame = 1
Query: 1165 EVASAAGVYVAVGLETGAMEVMRLSSRRAGTRVFDLAKASDRFDRSSSSCDATVAS-SRAGNDGPAAGSASGDNLSRPVSGDQNENRRPCRERVVVPRPPDSPSHTPDEFDDGLARRLRLDRDEVELAEGALSGAAAASTTVAAATVGPMASALCGWHVPPDCKSSDSWAGRGLVVGFSDTKVATHPFAATPKTPLDHTFSNAPRRGWGMISESVGGGRSGGKTGGGNEQQVFAVCTMDGCVRCCRIVSTPEGQPQWKHLWTRQTKEALHSFHRLDCPVGLDSRGQVEEERG---SLIVLCSWSGNTFIFDAEGTPCVAFDAEPYLAGPLTAFVAGNLTTLSSLAGPSLVYLGTEGKVVAYHGLLGQRDSMVPAQQFIPSLQKDGSIDTLRELLTILANLLQWRSNQGDL-LFPPTFPPPEARPAGDKELDDIASNAGSDAXXXXXXXXXXXXXEVDAADALSDDE-NIALSLPDEVLARAVLCPSGVVVALASTARREDRRKNTADGGEGGSGVDDHRWRREVHALAKGHGGTITVGEGAAAVERVLREIKAWETRGREPTLKNFPCLRGTLEGLTAWGSGPRRESLRRFSLQDQTCGYATEVPLSAPG 2976
+ ASAAGVYVAVGL+TG +EVMRLSS+R GTR+ DL AS+R DR SS DA A+ S DG AAG A G LSR +S D + R +PP P P +L + E L GAAAA+ + A A G +AS LCGWHVP D S+D+WAGRGLVVGFSDT+ EALHSF RLD E E G SL V+CSWSGNTF+FDAEG PC FDAE YL GPLTAFVAG+LTT S GPSLVYLG EGKVVAYHGL Q +S PAQ F+P L KDGS+ TL++LLT LAN LQWRS++ L LFP + PPP+A+PA + E A GS AA+ SDDE + ALSL D +L RAVLC G+VVALASTARR +RRK+TAD GG DD RWRRE+ ALA+G G TI VGEGAAA++RVL+E++AWETRGREPTLK+FPCLRGTLE L++WGSGPRR+SLR + + AT ++PG
Sbjct: 65 QCASAAGVYVAVGLDTGVVEVMRLSSQRMGTRILDLVIASERSDRLSSISDAAAAADSHPAADGSAAGDALGGGLSR-LSSDDRDAHVCLRSETSALQPP--PEGEP---------AAKLSGEVGNQEERVLPGAAAAAASTATAA-GLVASVLCGWHVPADSPSADAWAGRGLVVGFSDTE------------------------------------------------------------------------------------EALHSFQRLDF----------EREEGGTESLFVVCSWSGNTFMFDAEGMPCAGFDAEAYLPGPLTAFVAGDLTTPSGSTGPSLVYLGAEGKVVAYHGLPEQIESATPAQ-FMPILVKDGSMGTLKDLLTSLANRLQWRSSEQALPLFPSSTPPPDAQPADESECVQFADGTGSSGPAEVASAA--------AANIFSDDEPDTALSLSDSILTRAVLCSPGLVVALASTARRNERRKSTAD--SGGCSFDDARWRREMRALAEGEGSTIKVGEGAAAIDRVLKEMQAWETRGREPTLKHFPCLRGTLEALSSWGSGPRRDSLRSALKESE----ATAEVFASPG 552
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 7739.XP_002608490.1 |
| Preferred name | ITFG2 |
| PFAMs | Itfg2 |
| Model size | 3640 |
| Max annot lvl | 33208|Metazoa |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002285,GO:0002312,GO:0002313,GO:0002314,GO:0002335,GO:0002366,GO:0002376,GO:0002520,GO:0002521,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005765,GO:0005773,GO:0005774,GO:0005829,GO:0006950,GO:0006955,GO:0007154,GO:0007275,GO:0008150,GO:0009267,GO:0009605,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010646,GO:0010648,GO:0016020,GO:0023051,GO:0023057,GO:0030097,GO:0030098,GO:0030154,GO:0030183,GO:0031090,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032006,GO:0032007,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034198,GO:0042113,GO:0042149,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045321,GO:0046649,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070013,GO:0071496,GO:0098588,GO:0098805,GO:0098852,GO:0140007,GO:1902531,GO:1902532,GO:1903432,GO:1904262,GO:1990928 |
| Exons | 11 |
| Evalue | 3.43e-09 |
| EggNOG OGs | 2CN78@1|root,2QUBC@2759|Eukaryota,39REQ@33154|Opisthokonta,3BATP@33208|Metazoa,3CX0J@33213|Bilateria,486M9@7711|Chordata |
| Ec32 ortholog description | WD40-repeat-containing domain |
| Ec32 ortholog | Ec-02_006210.1 |
| Description | Integrin alpha FG-GAP repeat containing 2 |
| Cds size | 2889 |
| COG category | S |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791735.6670563-UTR-P-littoralis_Contig86:530810..530918 | 1680791735.6670563-UTR-P-littoralis_Contig86:530810..530918 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig86 530811..530918 + |
| 1680791735.8119628-UTR-P-littoralis_Contig86:537690..538333 | 1680791735.8119628-UTR-P-littoralis_Contig86:537690..538333 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig86 537691..538333 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791735.6790032-CDS-P-littoralis_Contig86:530918..531150 | 1680791735.6790032-CDS-P-littoralis_Contig86:530918..531150 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig86 530919..531150 + |
| 1680791735.6885822-CDS-P-littoralis_Contig86:532216..532346 | 1680791735.6885822-CDS-P-littoralis_Contig86:532216..532346 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig86 532217..532346 + |
| 1680791735.7040868-CDS-P-littoralis_Contig86:532625..532733 | 1680791735.7040868-CDS-P-littoralis_Contig86:532625..532733 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig86 532626..532733 + |
| 1680791735.7165024-CDS-P-littoralis_Contig86:533336..533508 | 1680791735.7165024-CDS-P-littoralis_Contig86:533336..533508 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig86 533337..533508 + |
| 1680791735.7286305-CDS-P-littoralis_Contig86:533948..534071 | 1680791735.7286305-CDS-P-littoralis_Contig86:533948..534071 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig86 533949..534071 + |
| 1680791735.7381613-CDS-P-littoralis_Contig86:534324..535410 | 1680791735.7381613-CDS-P-littoralis_Contig86:534324..535410 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig86 534325..535410 + |
| 1680791735.751836-CDS-P-littoralis_Contig86:535879..535989 | 1680791735.751836-CDS-P-littoralis_Contig86:535879..535989 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig86 535880..535989 + |
| 1680791735.7637432-CDS-P-littoralis_Contig86:536185..536369 | 1680791735.7637432-CDS-P-littoralis_Contig86:536185..536369 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig86 536186..536369 + |
| 1680791735.7741404-CDS-P-littoralis_Contig86:536561..537132 | 1680791735.7741404-CDS-P-littoralis_Contig86:536561..537132 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig86 536562..537132 + |
| 1680791735.785488-CDS-P-littoralis_Contig86:537465..537557 | 1680791735.785488-CDS-P-littoralis_Contig86:537465..537557 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig86 537466..537557 + |
| 1680791735.7949438-CDS-P-littoralis_Contig86:537609..537690 | 1680791735.7949438-CDS-P-littoralis_Contig86:537609..537690 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig86 537610..537690 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig86.149.10 >prot_P-littoralis_Contig86.149.10 ID=prot_P-littoralis_Contig86.149.10|Name=mRNA_P-littoralis_Contig86.149.10|organism=Pylaiella littoralis U1_48|type=polypeptide|length=963bp
MLRGKKGNILARSVCYPRQHTTVFEGAPIVSGSAAVLLGDVDNDPQSEIE LAVAGVNGTLAVFKTGHPTPGPYFEASGLGTLSALGLGKLFLGYGDDQQQ LIACTEEGVCHIFNIRPADIKWDQESDTTGRVAPVWSVTCPTNVTSCCIA DIDGDKMQEVVMGTREGGVHVLKMNFNREEDSCSDVLSLSSAAQSRPPTP AFEEHGLEHAVELVAPDVDRSDATLASTGIPGEHSMDPLEVHHVESRKSL ATPDNTSAPGIGAPSDQAVPLSPHLKSLLELKAQDAVTSLSIIYVPETAA DAAATATTTTTQAAAVAAEARADETENVGGDRGSPVAGEAASGLNLRAAE KMEVASAAGVYVAVGLETGAMEVMRLSSRRAGTRVFDLAKASDRFDRSSS SCDATVASSRAGNDGPAAGSASGDNLSRPVSGDQNENRRPCRERVVVPRP PDSPSHTPDEFDDGLARRLRLDRDEVELAEGALSGAAAASTTVAAATVGP MASALCGWHVPPDCKSSDSWAGRGLVVGFSDTKVATHPFAATPKTPLDHT FSNAPRRGWGMISESVGGGRSGGKTGGGNEQQVFAVCTMDGCVRCCRIVS TPEGQPQWKHLWTRQTKEALHSFHRLDCPVGLDSRGQVEEERGSLIVLCS WSGNTFIFDAEGTPCVAFDAEPYLAGPLTAFVAGNLTTLSSLAGPSLVYL GTEGKVVAYHGLLGQRDSMVPAQQFIPSLQKDGSIDTLRELLTILANLLQ WRSNQGDLLFPPTFPPPEARPAGDKELDDIASNAGSDAAAAAAAAAAAAA AEVDAADALSDDENIALSLPDEVLARAVLCPSGVVVALASTARREDRRKN TADGGEGGSGVDDHRWRREVHALAKGHGGTITVGEGAAAVERVLREIKAW ETRGREPTLKNFPCLRGTLEGLTAWGSGPRRESLRRFSLQDQTCGYATEV PLSAPGSPVGLS* back to topmRNA from alignment at P-littoralis_Contig86:530811..538333+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig86.149.10 ID=mRNA_P-littoralis_Contig86.149.10|Name=mRNA_P-littoralis_Contig86.149.10|organism=Pylaiella littoralis U1_48|type=mRNA|length=7523bp|location=Sequence derived from alignment at P-littoralis_Contig86:530811..538333+ (Pylaiella littoralis U1_48) TGGGCGCACAGCCCCCTCGCTTCGTCCACTTGATATGTGCCTCCTGTGTT
GATTTCGTCGATTTTTCGTTGAAAGAAGCCCGGTCGGTGTCGGGTGTGGA
AGCAGGTCATGCTGAGAGGCAAAAAGGGAAACATTCTTGCCAGATCCGTG
TGCTACCCCAGGCAGCACACGACCGTGTTCGAGGGCGCGCCGATCGTTTC
AGGGTCGGCGGCGGTTCTGCTTGGCGATGTTGACAACGACCCACAGTCGG
AAATTGAGCTGGCTGTAGCCGGGGTGAATGGCACTCTAGCTGTGTTCAAG
ACGGGCCATCCCACGCCGGGGCCGTACTTCGAGGCGTCAGGTACACTCTC
GTTCACTGACTGTGCTTATTCATCCACTTGCTTGCCTTATTTACCAGATT
CATTTTGATTTCAGTATTTCAATTTCAACTGCTGTATCGTATCGAGCTGA
TCTTATCCATCTGCTGCACTCATACATGCAGCAGTAGTGCAAGGCGGCAG
AGACTCCACTTGTTCGATGGACAGAAGATATCGCATCACAAAGTTCGAGT
ACATGATACTGCTGTACATCAGTAGTAGCAAGAACAGCAGCAGTGATAGC
ACCTACAAGGGTGGCATCGGAAAGATGTCGTCCGGACCTCTACCAAGATG
ATTTGTTTGGTACGATATTGTAAGTTTCTTAGAAGTCAAGCTTTGAAAAT
TGGTCGAAGGAGGGGTGATATCCCACGTCACCAACGGTAACAACCGACAT
TGCTGTTACACGAAGTACGTGCGTGAGTACATATGACATGAACCTCAGAG
GTGCTCTAAGCTCTTCAGAGGTGCTTTAAGCTCTTCGTTGCCCCGATTCC
CCCCTCTTGCTGTTACCTGTCACGGCGGTGGACGATGGGACGTTTTACGG
TGTTGGCATGATAGACGGTACTGCGCATCCTCAACCGTGTCTTTTGCTCT
TGACATGGGGGGTCACCAGAAACTGATGTGGCCTTGAATGTAACTGTGCC
CCCCGGACGCTTGAGCATCATGGCACGAATGCAAGATCGAGTCACGTCTA
ATAGCAGCATGATAGGTGCGACTAGTTGATCACGGAATAAACTACGTTTT
CGCAAGCACCCTTGTAAATACGACCTGAACATCATGAAGCACCGCGCCCC
CTTCATAGTCCTCGTATATACTCCGAGTAGTACGACACCTGGATGAACGG
CTGTCAATCCGAACAGAGAGCAAAGGGAAGGGAACCTCAGCATTTGTGGG
TGTCCAGGGGGGGGGGGTACTCGCCGAAGACACATCCAATGTGCCGCTCA
ACTACCGCTGTGAGTTGAAACGCCGTCATTCCTCACATCGAAGTTGGTGA
CAAAACTTTGTTTTTGAGTTTTGCAAATCAACGCCGTTCTCGTTTTGTTT
CACCAGGGCTTGGGACCTTGTCCGCGCTCGGCCTCGGCAAGTTGTTTTTG
GGTTATGGCGATGACCAACAGCAGCTGATCGCTTGCACGGAAGAAGGTGT
TTGCCATATTTTCAACATCAGGCCTGCCGACATAAAGTGAGGCAAAGCTC
TTTGCACGTTAGCAAAAGGCCTTATTCGGTAAGCTGTTGCTCATTCAGCG
TTCAGCACCTGACAACTCTGCGAGGGGACGGGGGGTCAGAAAAGCAGCTT
TGTTTGTGTGAATACCGAAGGTTCATTCCTCTCAACATATTGTTCGGGTG
GTGATGGATTTCCCAAGTGCCAAATGCGCCCTGCCATTCGATCCGGGTAT
CACAAGCGGCAAGGCGTTGCTGTACCCAGCAATTCGCTGCTGTGTTCGTC
TACTCGATCTCGCAGATGGGATCAAGAATCTGATACTACTGGGCGGGTTG
CTCCGGTATGGTCGGTAACTTGCCCGACCAATGTGACGTCATGCTGCATA
GCGGACATCGATGGAGACAAAATGTGAGCGTCGTGGGTGCCTGTCTCTGT
CGGTTGCTACGGCGGCTTCCGTAAGATGCATCATCCGTATCCCGTTGTGA
TCCGAACATGTCACACACCGGTGCATCTCGTCTACAAGAATACATCGTTG
AGAGAGAGAGGTATGGAGCTTGTTGGATACATACCGTGAATTGCGAGTAA
TGTTTATGTTCCTGTTCGGATCCAAGTGGGAAACCTAAGATCGGTGGGTT
GATTGCCTTGACGATTTTCTCGAAGCCCGGCTGCTTGATTGCGCCGAGCA
GCGAAACGCACATCAGTAGCACCCAAAAACAAAATAAATACACCCAACAG
CAGACCCCTCAAGTGCTGCACTCCCCCCCCCAAGGCCGTCATAGGCGGAA
AGTTTAAGTTTCTTGATCACCCTGGATTTACCATATGACCATTCTTTGCG
GTGGTTGGAAGTCAAACACCGGATGTCTCTCCCCGGTCGATCGTATTTGT
AGGAAGACAGCTCCGAGTCAAAAGCGCCGGAAAGGTTGACCCTAAGACAA
GTGCTGCACTCTCCCCCCCTCTCTCAGTAGTATTAACCATTTTCCGTCTC
GTCCATGGTTGTGATGGCTGTCAAAGGCAGGAGGTCGTCATGGGAACGCG
GGAAGGCGGCGTGCATGTCCTGAAAATGAATTTCAACCGAGAGGAAGACT
CGTGCAGCGACGTCCTTTCTTTATCGTCTGCCGCACAGTCGAGGCCGCCG
ACCCCGGCTTTCGAGGAACACGGGCTGGAGCATGCGGTGGAGTTGGTGGT
GCGTGCGCGTGGCCCCGGGTCGGCCTTCTAGCCCCTTGAGGGCTTCAACC
CCCAATAGACCAGTGCTAAGATATGCACATATCCACTTTACCACTAGTCA
GCGCTGACGAGTGGTACAGTAGATATGTGTACATCTTAGCAACCAGACCC
GGCAAGGAGGGGGAGGGGATCCCCGCTTGTAGTAAAGAAGCGTGTGCTGT
ACCGTCCGCTCTCGAGATTTTTCGCTGGGTGGCGTGTCTCCTGTGAGTTT
GTTAGCATGCCGACCGCTCTGTGCGATGTACGGTAGCCTCGTCAAGGTTT
TCTGCTTGCGTTTGATGGCGGCAGCACCATTCTGCAAGCTTCGGACGCTC
GAGATTTGTGTTCGAGGTCAACGTCTGCCCGCCGCACTTCCCCGAATCGA
CACACCTAAACCTGGCGCTAACCTGCTGTGTTGCTCAGGCTCCAGACGTC
GACCGGTCTGACGCCACACTGGCGTCCACCGGAATTCCAGGCGAGCACTC
TATGGACCCATTGGAAGTGCACCACGTGGAGAGCCGAAAAAGCCTGGCGA
CGCCGGACAACGTGAGCTTCCTCTTGTTGTCCGTGTTCACATGATGCACG
AGCACTCAGGAACCGAGAAGAACGATGGACTTTGTAGAGGAGGTTTTGTC
TCTGCCTTATTCCTAGTAATCCTGTATCGTCTACAAGTATGCCTCAGGAA
AGAGGTGGCGAAAAGTGAACCATTGGTACCCGCCAAGACAGAGTACCGTC
GCTTGCCCCCCCCCCCCCCCCCCCCGTGGAAGCTCATCCTGTCGCGTTTT
TACCTTGTCTTCAGACCAGCGCTCCAGGTATCGGTGCCCCCAGTGACCAA
GCGGTCCCTCTGAGTCCCCACTTGAAGTCTCTCCTGGAACTGAAGGCGCA
GGACGCCGTGACAAGCCTCTCCATCATTTACGTCCCGGAGACGGCTGCCG
ATGCCGCCGCTACCGCTACCACTACCACTACACAAGCAGCCGCAGTCGCA
GCAGAAGCCCGAGCTGACGAAACCGAAAATGTTGGAGGAGACAGGGGTAG
CCCCGTCGCCGGCGAAGCCGCATCGGGGCTGAATCTGCGCGCAGCGGAGA
AGATGGAGGTGGCGTCGGCCGCCGGAGTCTACGTCGCCGTAGGTCTGGAG
ACGGGAGCGATGGAGGTCATGAGGCTCAGCAGCCGACGCGCCGGGACCCG
GGTGTTCGACCTCGCGAAAGCCTCCGACCGATTTGACCGGTCGTCCTCGT
CTTGCGACGCGACGGTGGCGAGCTCGCGTGCTGGTAACGACGGCCCGGCT
GCCGGCAGCGCGTCGGGCGATAATCTTTCTCGGCCCGTCAGCGGCGACCA
GAACGAGAACCGCCGTCCGTGCCGTGAGAGGGTGGTGGTGCCACGGCCGC
CAGATTCGCCCTCTCACACGCCCGACGAGTTCGATGATGGACTGGCGCGG
CGCCTGCGTCTCGACCGAGATGAAGTCGAGCTTGCGGAAGGTGCGCTGTC
TGGAGCAGCGGCAGCTTCGACAACAGTGGCAGCAGCGACAGTGGGGCCGA
TGGCATCGGCCTTGTGCGGTTGGCACGTCCCTCCGGACTGCAAGAGCTCC
GACTCTTGGGCGGGCCGAGGGCTCGTCGTAGGTTTTTCCGACACCAAGGT
CGCAACCCATCCCTTCGCCGCGACACCGAAAACTCCGTTGGATCACACGT
TCAGCAACGCGCCGAGAAGAGGGTGGGGGATGATCAGTGAGAGCGTCGGC
GGCGGAAGAAGCGGGGGTAAAACGGGCGGTGGGAATGAGCAACAGGTGTT
CGCGGTCTGCACAATGGACGGGTGCGTCCGGTGCTGCCGGATCGTTTCAA
CTCCCGAAGGGCAGCCGCAGTGGAAGCATTTGTGGACGAGACAGACCAAG
GCGAGTTGTATAGGCAGCTGGCAGTTTCGGCCGTTCCACCTGCATGCAGC
ATAGCAGTTCCATTTGGGTCAGTTTCGTTGTGTGTTGGGTCGTTCACAAA
AATCCATTTTTTTTGTCAGCAAAACCGCGACGGGGCTTGAGCAATATCAT
ACAAATGTAAGGGTAGGTTTTCACGCCATGTTCGACTTGTACGATGGATT
CAAATAGTGCGGGAAATGGTGATCTTGTTTTAGCTCTTCGCACCGACCGC
ACGGCGTGTATTGTTGCCAGGGTCTCCTTTGTTCGACTGCACTTTCACGG
TGGTGAACCGCACCACGTCGTCGGGTCATGGAGATATGATCTACTCGAAC
TGCTGCGGGGTGGTAACGTGCTAGACGCGACAAACCGTCGTAATACCATA
TGCGAAATATCGCATAACTTTTATCTGACTCTTTCAAATCTTCTCTTTTG
CCTCCAAAAACCATCGCAGGAAGCGTTGCACTCGTTCCACAGGCTAGACT
GCCCCGTGGGACTGGACAGCCGCGGACAAGTGGAGGAGGAGAGGGGGAGC
CTAATTGTCTTGTGCTCTTGGAGTGGAAAGTGAGGCGTCCAGGCAGCCGG
CTCAGACCGACCGCAAATAATATCTATCATGTCGCGAGTTTTCTTGACAG
ACTACCACGACACGTTGTTGTCGCCTGTCCCTGCAGGCTGTCGGCGCTTG
CAACACAACGAGTCATGCTGTAGTATGACACCCTCAACCTCCCCCCTTCC
CCCCCTCCTGTATCCCTTTTGTCAGCACTTTCATTTTCGACGCCGAAGGC
ACGCCATGCGTAGCGTTTGACGCCGAACCGTACCTGGCGGGCCCCCTGAC
TGCGTTCGTGGCGGGAAACCTCACGACGCTGTCGTCGTTGGCAGGGCCTT
CCTTGGTCTACCTCGGCACCGAGGGAAAGGTGGTGGCGTACCACGGCTTG
CTCGGGCAGGTATGTGATGTGCGGCCTGCGGTCTGCGGACTCACGAACGA
CGTGTGATTTTTTTTTTTGTGACGGTGGTGTTGGGAGTTTTTGTGGTTTA
CATAGCGTTAATTTTGCGTTCCTTTCTGATGGACCCCCCCCGCCGCCCGC
CCCGCGAACGCATCTCCGTGCTCCAACGTTAATTCGCTGCCGCCCAACTA
GAGAGATTCGATGGTTCCCGCGCAGCAGTTTATCCCGAGCCTGCAAAAAG
ACGGCTCGATCGACACACTCAGAGAACTCTTGACGATCCTGGCGAACCTT
CTCCAATGGCGTTCCAACCAAGGAGACCTCCTGTTTCCACCCACCTTTCC
TCCGCCCGAGGCGCGCCCTGCTGGTGACAAGGAACTTGACGACATCGCGA
GTAACGCCGGCTCAGATGCCGCCGCTGCTGCTGCTGCTGCTGCCGCGGCC
GCTGCCGCCGAGGTCGACGCCGCCGACGCGCTTTCCGACGATGAGAACAT
CGCCTTATCCCTGCCTGACGAGGTCTTGGCGCGGGCGGTGCTGTGCCCCT
CGGGCGTCGTGGTCGCGTTGGCGAGCACTGCGAGGCGGGAAGACCGCCGG
AAGAACACCGCGGACGGTGGCGAAGGTGGCAGCGGGGTTGACGACCACCG
ATGGCGCCGCGAAGTCCACGCCCTTGCCAAGGGGCACGGGGGAACCATCA
CCGTTGGCGAGGGTGCAGCAGCAGTCGAAAGGGTTCTGAGAGAGATCAAG
GCATGGGAAACAAGGGGGAGAGGTGCGGCTACGATAAGATCGTATGTTGG
GACAGAGGCAAAATCAACGTGTGCTGCTGCTGTAGTGCCATCACACATAC
TCCGGTACTTTCCGGGGGGTCCATTGGAAAATGTGTGACGCGCGGCTGTG
CGTGCAGCCCACGCCATCCATCGACGCTCCTTCAGGACACGCTCAGACAT
GTTGTCAGGGCCTCAAATCTTGTTTCATCGGGGCAAGCCTGTGTACGTAG
CAGGTTTCGTTTGAGTACCCCCGCCATCGGAGCGTTTGCACCGCGTGCGC
AAAATTCAGTGCCCGTTTGACCTCTGCCTCGTCCTTGTGTCCGCCCCCTG
CGCAGAACCCACCCTCAAGAACTTTCCTTGCTTACGAGGGACGTTGGAGG
GTTTGACAGCCTGGGGATCGGGCCCACGGCGAGAGTCGCTCCGGAGAGCT
CTGAGGGAGTCAGAGGCCAAGACGGAAGTTTGCGCTCCTCCGAGCTAAGT
TCAGCCTGCAAGATCAGACATGTGGTTACGCAACGGAAGTACCTTTAAGT
GCCCCTGGTAGCCCTGTCGGCCTGAGCTGATCGATATTTGGGAGGTGATG
AGTTTTGAGATTTTCGTCTTTCGCGGCTTGTATGACGTGAAAATGTACCT
TTTTATGTCGCGGGGATATTTTGGTAAACATTACTTCGAAGTATTCGTCA
TCTCAGCGTGCTTCTTCTTGACTCTTATCATACGTTCACTCTTGTTTCAG
CGTTCGTGCCATTGAGTCCCGTGCGTTTTTTTTTTGTGGGCGGGGTGGAC
TCTTTGGTGCACCGTTCATTTTGCGTGCTTGCCGTTGTCGTCTCCGGTTA
TCGGTACTACAACATTCATGGCGGTTCGGTGTCGCTCCCGCGGCCTAAAG
TTTTCATCACAGCCCTTGGGTACTGTAGCTCGGTCGTGAAATCCAGTCTA
AACACGAAGTTGCTCTCGTTGTGCCTGACCCTGCCTTCGTGAGGGCAGTA
ACCGGTGAGAATTAGATCGAGTTGCTGGCGAGGTCAGAAAGTCTGCTAGG
CCCATCTTGCGATGATTTTTCGCGAGCATTTTTGAAGGCGTGCGTCGCAG
AGCTTTTGTGTCATTCTTGTGCGACCTGCTTGTTTGTCCGCCCGTACTCG
CAAGTTTGTCCATGTAAGGTATTTACGCATGAAGCTCAGGGCTAGCAATA
CGGGCGAATTCAAACAACCACCG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig86:530811..538333+ >mRNA_P-littoralis_Contig86.149.10 ID=mRNA_P-littoralis_Contig86.149.10|Name=mRNA_P-littoralis_Contig86.149.10|organism=Pylaiella littoralis U1_48|type=CDS|length=2889bp|location=Sequence derived from alignment at P-littoralis_Contig86:530811..538333+ (Pylaiella littoralis U1_48) ATGCTGAGAGGCAAAAAGGGAAACATTCTTGCCAGATCCGTGTGCTACCC CAGGCAGCACACGACCGTGTTCGAGGGCGCGCCGATCGTTTCAGGGTCGG CGGCGGTTCTGCTTGGCGATGTTGACAACGACCCACAGTCGGAAATTGAG CTGGCTGTAGCCGGGGTGAATGGCACTCTAGCTGTGTTCAAGACGGGCCA TCCCACGCCGGGGCCGTACTTCGAGGCGTCAGGGCTTGGGACCTTGTCCG CGCTCGGCCTCGGCAAGTTGTTTTTGGGTTATGGCGATGACCAACAGCAG CTGATCGCTTGCACGGAAGAAGGTGTTTGCCATATTTTCAACATCAGGCC TGCCGACATAAAATGGGATCAAGAATCTGATACTACTGGGCGGGTTGCTC CGGTATGGTCGGTAACTTGCCCGACCAATGTGACGTCATGCTGCATAGCG GACATCGATGGAGACAAAATGCAGGAGGTCGTCATGGGAACGCGGGAAGG CGGCGTGCATGTCCTGAAAATGAATTTCAACCGAGAGGAAGACTCGTGCA GCGACGTCCTTTCTTTATCGTCTGCCGCACAGTCGAGGCCGCCGACCCCG GCTTTCGAGGAACACGGGCTGGAGCATGCGGTGGAGTTGGTGGCTCCAGA CGTCGACCGGTCTGACGCCACACTGGCGTCCACCGGAATTCCAGGCGAGC ACTCTATGGACCCATTGGAAGTGCACCACGTGGAGAGCCGAAAAAGCCTG GCGACGCCGGACAACACCAGCGCTCCAGGTATCGGTGCCCCCAGTGACCA AGCGGTCCCTCTGAGTCCCCACTTGAAGTCTCTCCTGGAACTGAAGGCGC AGGACGCCGTGACAAGCCTCTCCATCATTTACGTCCCGGAGACGGCTGCC GATGCCGCCGCTACCGCTACCACTACCACTACACAAGCAGCCGCAGTCGC AGCAGAAGCCCGAGCTGACGAAACCGAAAATGTTGGAGGAGACAGGGGTA GCCCCGTCGCCGGCGAAGCCGCATCGGGGCTGAATCTGCGCGCAGCGGAG AAGATGGAGGTGGCGTCGGCCGCCGGAGTCTACGTCGCCGTAGGTCTGGA GACGGGAGCGATGGAGGTCATGAGGCTCAGCAGCCGACGCGCCGGGACCC GGGTGTTCGACCTCGCGAAAGCCTCCGACCGATTTGACCGGTCGTCCTCG TCTTGCGACGCGACGGTGGCGAGCTCGCGTGCTGGTAACGACGGCCCGGC TGCCGGCAGCGCGTCGGGCGATAATCTTTCTCGGCCCGTCAGCGGCGACC AGAACGAGAACCGCCGTCCGTGCCGTGAGAGGGTGGTGGTGCCACGGCCG CCAGATTCGCCCTCTCACACGCCCGACGAGTTCGATGATGGACTGGCGCG GCGCCTGCGTCTCGACCGAGATGAAGTCGAGCTTGCGGAAGGTGCGCTGT CTGGAGCAGCGGCAGCTTCGACAACAGTGGCAGCAGCGACAGTGGGGCCG ATGGCATCGGCCTTGTGCGGTTGGCACGTCCCTCCGGACTGCAAGAGCTC CGACTCTTGGGCGGGCCGAGGGCTCGTCGTAGGTTTTTCCGACACCAAGG TCGCAACCCATCCCTTCGCCGCGACACCGAAAACTCCGTTGGATCACACG TTCAGCAACGCGCCGAGAAGAGGGTGGGGGATGATCAGTGAGAGCGTCGG CGGCGGAAGAAGCGGGGGTAAAACGGGCGGTGGGAATGAGCAACAGGTGT TCGCGGTCTGCACAATGGACGGGTGCGTCCGGTGCTGCCGGATCGTTTCA ACTCCCGAAGGGCAGCCGCAGTGGAAGCATTTGTGGACGAGACAGACCAA GGAAGCGTTGCACTCGTTCCACAGGCTAGACTGCCCCGTGGGACTGGACA GCCGCGGACAAGTGGAGGAGGAGAGGGGGAGCCTAATTGTCTTGTGCTCT TGGAGTGGAAACACTTTCATTTTCGACGCCGAAGGCACGCCATGCGTAGC GTTTGACGCCGAACCGTACCTGGCGGGCCCCCTGACTGCGTTCGTGGCGG GAAACCTCACGACGCTGTCGTCGTTGGCAGGGCCTTCCTTGGTCTACCTC GGCACCGAGGGAAAGGTGGTGGCGTACCACGGCTTGCTCGGGCAGAGAGA TTCGATGGTTCCCGCGCAGCAGTTTATCCCGAGCCTGCAAAAAGACGGCT CGATCGACACACTCAGAGAACTCTTGACGATCCTGGCGAACCTTCTCCAA TGGCGTTCCAACCAAGGAGACCTCCTGTTTCCACCCACCTTTCCTCCGCC CGAGGCGCGCCCTGCTGGTGACAAGGAACTTGACGACATCGCGAGTAACG CCGGCTCAGATGCCGCCGCTGCTGCTGCTGCTGCTGCCGCGGCCGCTGCC GCCGAGGTCGACGCCGCCGACGCGCTTTCCGACGATGAGAACATCGCCTT ATCCCTGCCTGACGAGGTCTTGGCGCGGGCGGTGCTGTGCCCCTCGGGCG TCGTGGTCGCGTTGGCGAGCACTGCGAGGCGGGAAGACCGCCGGAAGAAC ACCGCGGACGGTGGCGAAGGTGGCAGCGGGGTTGACGACCACCGATGGCG CCGCGAAGTCCACGCCCTTGCCAAGGGGCACGGGGGAACCATCACCGTTG GCGAGGGTGCAGCAGCAGTCGAAAGGGTTCTGAGAGAGATCAAGGCATGG GAAACAAGGGGGAGAGAACCCACCCTCAAGAACTTTCCTTGCTTACGAGG GACGTTGGAGGGTTTGACAGCCTGGGGATCGGGCCCACGGCGAGAGTCGC TCCGGAGATTCAGCCTGCAAGATCAGACATGTGGTTACGCAACGGAAGTA CCTTTAAGTGCCCCTGGTAGCCCTGTCGGCCTGAGCTGA back to top
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