prot_P-littoralis_Contig86.149.10 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig86.149.10
Unique Nameprot_P-littoralis_Contig86.149.10
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length963
Homology
BLAST of mRNA_P-littoralis_Contig86.149.10 vs. uniprot
Match: A0A6H5JG01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG01_9PHAE)

HSP 1 Score: 865 bits (2235), Expect = 1.630e-300
Identity = 543/1015 (53.50%), Postives = 628/1015 (61.87%), Query Frame = 0
Query:    1 MLRGKKGNILARSVCYPRQHTTVFEGAPIVSGSAAVLLGDVDNDPQSEIELAVAGVNGTLAVFKTGHPTPGPYFEASGLGTLSALGLGKLFLGYGDDQQQLIACTEEGVCHIFNIRPADIKWDQESDTTGRVAPVWSVTCPTNVTSCCIADIDGDKMQEVVMGTREGGVHVLKMNFNREEDSC------------------------SDVLSLSSAAQSRPPTPAFEEHGLEHAVELVAPDVDRSDATLASTGIPGEHSMDPLEVHHVESRKSLATPDNTSAPGIGAPSDQAVPLSPHLKSLLELKAQDAVTSLSIIYVPETAADAAXXXXXXXXXXXXXXXEARAD-ETENVGGD-RG---------SPVAGEAASGLNLRAAEKMEV-ASAAGVYVAVGLETGAMEVMRLSSRRAGTRVFDLAKASDRFDRSSSSCDATVAS-SRAGNDGPAAGSASGDNLSRPVSGDQNENRRPCRERVVVPRPPDSPSHTPD-EFDDGLARRLRLDRDEVELAEGALSGAAAASTTVAAATVGPMASALCGWHVPPDCKSSDSWAGRGLVVGFSDTKVATHPFAATPKTPLDHTFSNAPRRGWGMIS-ESVGGGRSGGKTGGGNEQQVFAVCTMDGCVRCCRIVSTPEGQPQWKHLWTRQTKEALHSFHRLDCPVGLDSRGQVEEERG---SLIVLCSWSGNTFIFDAEGTPCVAFDAEPYLAGPLTAFVAGNLTTLSSLAGPSLVYLGTEGKVVAYHGLLGQRDSMVPAQQFIPSLQKDGSIDTLRELLTILANLLQWRSNQGDL-LFPPTFPPPEARPAGDKELDDIASNAGSDAXXXXXXXXXXXXXEVDAADALSDDE-NIALSLPDEVLARAVLCPSGVVVALASTARREDRRKNTADGGEGGSGVDDHRWRREVHALAKGHGGTITVGEGAAAVERVLREIKAWETRGR---------------EPTLKNFPCLRGTLEGLTAWGSGPRRESLRRFSLQDQTCGYATEVPLSAPG 956
            M R  K ++LAR+VC  RQ TTVFEGAP+VSGSAAVLLGDVDNDPQ+E ELAV GV+GTLAVFK GHPTPGPYF ASGLGTLSALGLGKLFLGYGDDQQ LIACTEEGVCHIFNIRPAD+KWD ESDT GRV PVWSV CP NVTSCCIADIDGDKMQEVVMGTREGGVHVLK++FN+E+                           SDV   S AAQSR  TP  +E GLE     +A D D SDAT      P   S  P +  + E RKS+ TPD+T+APG+ A   Q   LSPHLK LLELKAQDAVTSLSI++VPE ++  +                A+AD  ++NV G  RG          P  G  +        + ME  ASAAGVYVAVGL+TG +EVMRLSS+R GTR+ DL  AS+R DR SS  DA  A+ S    DG AAG   G  LSR +S D  +     R      +P            +     RLRLDRDEV   E  +   AAA+    A   G +AS LCGWHVP D  S+DSWAGRGLVVGFSDT+  T PFA TP+TPL HT  N P RGWG  + E VG G S  +TG G+ +Q                                   EALHSF RLD           E E G   SL V+CSWSGNT +FDAEG PC  FDAE +L GPLTAFVAG+LTT S   GPSLVYLG EGKVVAYHGL  Q +S  PAQ FIP L KDGS+D L++LLT LAN LQWRS++  L LFP + PPP+A+PA + E   +    GS                  AA+  SDDE + ALSL D +L RAVLC SG+VVAL STARR +RRK+TAD G      DD RWRRE+ ALA+G G TITVGEGAAA++RVL+E++AW+TRGR               EPTL +FPCLRGTLE L+ WGSGPRR+SLR    + +    AT    ++PG
Sbjct:    1 MPRFYKDSVLARTVCQSRQQTTVFEGAPVVSGSAAVLLGDVDNDPQAERELAVGGVDGTLAVFKVGHPTPGPYFMASGLGTLSALGLGKLFLGYGDDQQ-LIACTEEGVCHIFNIRPADLKWDPESDT-GRVNPVWSVPCPKNVTSCCIADIDGDKMQEVVMGTREGGVHVLKIDFNQEQHKGKDEGVKTTEKSGWAGGVSTGDTPRSDVFCSSPAAQSRHSTPTADEPGLER----LAQDGDESDATPNPVRGP---STGPSKSAYWEDRKSMETPDSTNAPGVVAADTQPFSLSPHLKPLLELKAQDAVTSLSIVFVPEISSMPSTSITSRSGEGVAPPATAQADGNSDNVDGSGRGLTTCPPHEDRPQGGSGSMPALASRTDVMEQGASAAGVYVAVGLDTGVVEVMRLSSQRVGTRILDLVIASERSDRLSSISDAAAAADSHPAADGSAAGDTLGGGLSR-LSSDDRDAHVCLRSETSASQPAAEGGPAAKLSGESNTMSRLRLDRDEVGNQEKRVLPGAAAAAVATATAAGLVASVLCGWHVPADSPSADSWAGRGLVVGFSDTEAGTSPFAETPRTPLGHTSGNVPTRGWGSKTIEGVGAGASSSQTGSGDGRQ-----------------------------------EALHSFQRLDF----------EHEEGGTESLFVVCSWSGNTLMFDAEGMPCAGFDAEAHLPGPLTAFVAGDLTTPSGSTGPSLVYLGAEGKVVAYHGLPEQIESATPAQ-FIPILVKDGSMDKLKDLLTSLANRLQWRSSEQALPLFPSSTPPPDAQPADESECVQLEDGTGSSGPAEVATAAA-------AANIFSDDEPDAALSLSDAILTRAVLCSSGLVVALGSTARRNERRKSTADCGA--CSFDDARWRREMRALAEGEGSTITVGEGAAAIDRVLKEMQAWQTRGRGSERPVRPLSPLLPAEPTLTHFPCLRGTLEALSCWGSGPRRDSLRSALKESK----ATAEVFASPG 946          
BLAST of mRNA_P-littoralis_Contig86.149.10 vs. uniprot
Match: D8LTG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG0_ECTSI)

HSP 1 Score: 444 bits (1143), Expect = 2.790e-142
Identity = 294/610 (48.20%), Postives = 347/610 (56.89%), Query Frame = 0
Query:  353 EVASAAGVYVAVGLETGAMEVMRLSSRRAGTRVFDLAKASDRFDRSSSSCDATVAS-SRAGNDGPAAGSASGDNLSRPVSGDQNENRRPCRERVVVPRPPDSPSHTPDEFDDGLARRLRLDRDEVELAEGALSGAAAASTTVAAATVGPMASALCGWHVPPDCKSSDSWAGRGLVVGFSDTKVATHPFAATPKTPLDHTFSNAPRRGWGMISESVGGGRSGGKTGGGNEQQVFAVCTMDGCVRCCRIVSTPEGQPQWKHLWTRQTKEALHSFHRLDCPVGLDSRGQVEEERG---SLIVLCSWSGNTFIFDAEGTPCVAFDAEPYLAGPLTAFVAGNLTTLSSLAGPSLVYLGTEGKVVAYHGLLGQRDSMVPAQQFIPSLQKDGSIDTLRELLTILANLLQWRSNQGDL-LFPPTFPPPEARPAGDKELDDIASNAGSDAXXXXXXXXXXXXXEVDAADALSDDE-NIALSLPDEVLARAVLCPSGVVVALASTARREDRRKNTADGGEGGSGVDDHRWRREVHALAKGHGGTITVGEGAAAVERVLREIKAWETRGREPTLKNFPCLRGTLEGLTAWGSGPRRESLRRFSLQDQTCGYATEVPLSAPG 956
            + ASAAGVYVAVGL+TG +EVMRLSS+R GTR+ DL  AS+R DR SS  DA  A+ S    DG AAG A G  LSR +S D  +     R      +PP  P   P           +L  +     E  L GAAAA+ + A A  G +AS LCGWHVP D  S+D+WAGRGLVVGFSDT+                                                                                    EALHSF RLD           E E G   SL V+CSWSGNTF+FDAEG PC  FDAE YL GPLTAFVAG+LTT S   GPSLVYLG EGKVVAYHGL  Q +S  PAQ F+P L KDGS+ TL++LLT LAN LQWRS++  L LFP + PPP+A+PA + E    A   GS                  AA+  SDDE + ALSL D +L RAVLC  G+VVALASTARR +RRK+TAD   GG   DD RWRRE+ ALA+G G TI VGEGAAA++RVL+E++AWETRGREPTLK+FPCLRGTLE L++WGSGPRR+SLR    + +    AT    ++PG
Sbjct:   65 QCASAAGVYVAVGLDTGVVEVMRLSSQRMGTRILDLVIASERSDRLSSISDAAAAADSHPAADGSAAGDALGGGLSR-LSSDDRDAHVCLRSETSALQPP--PEGEP---------AAKLSGEVGNQEERVLPGAAAAAASTATAA-GLVASVLCGWHVPADSPSADAWAGRGLVVGFSDTE------------------------------------------------------------------------------------EALHSFQRLDF----------EREEGGTESLFVVCSWSGNTFMFDAEGMPCAGFDAEAYLPGPLTAFVAGDLTTPSGSTGPSLVYLGAEGKVVAYHGLPEQIESATPAQ-FMPILVKDGSMGTLKDLLTSLANRLQWRSSEQALPLFPSSTPPPDAQPADESECVQFADGTGSSGPAEVASAA--------AANIFSDDEPDTALSLSDSILTRAVLCSPGLVVALASTARRNERRKSTAD--SGGCSFDDARWRREMRALAEGEGSTIKVGEGAAAIDRVLKEMQAWETRGREPTLKHFPCLRGTLEALSSWGSGPRRDSLRSALKESE----ATAEVFASPG 552          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.149.10 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JG01_9PHAE1.630e-30053.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTG0_ECTSI2.790e-14248.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031793Integrin-alpha FG-GAP repeat-containing protein 2PFAMPF15907Itfg2coord: 72..181
e-value: 4.1E-10
score: 39.2
coord: 552..710
e-value: 2.3E-11
score: 43.4
IPR031793Integrin-alpha FG-GAP repeat-containing protein 2PANTHERPTHR16317INTEGRIN ALPHA REPEAT DOMAIN-CONTAININGcoord: 12..172
coord: 574..712
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 759..781
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..464
IPR028994Integrin alpha, N-terminalSUPERFAMILY69318Integrin alpha N-terminal domaincoord: 28..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:530919..537690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.149.10mRNA_P-littoralis_Contig86.149.10Pylaiella littoralis U1_48mRNAP-littoralis_Contig86 530811..538333 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig86.149.10 ID=prot_P-littoralis_Contig86.149.10|Name=mRNA_P-littoralis_Contig86.149.10|organism=Pylaiella littoralis U1_48|type=polypeptide|length=963bp
MLRGKKGNILARSVCYPRQHTTVFEGAPIVSGSAAVLLGDVDNDPQSEIE
LAVAGVNGTLAVFKTGHPTPGPYFEASGLGTLSALGLGKLFLGYGDDQQQ
LIACTEEGVCHIFNIRPADIKWDQESDTTGRVAPVWSVTCPTNVTSCCIA
DIDGDKMQEVVMGTREGGVHVLKMNFNREEDSCSDVLSLSSAAQSRPPTP
AFEEHGLEHAVELVAPDVDRSDATLASTGIPGEHSMDPLEVHHVESRKSL
ATPDNTSAPGIGAPSDQAVPLSPHLKSLLELKAQDAVTSLSIIYVPETAA
DAAATATTTTTQAAAVAAEARADETENVGGDRGSPVAGEAASGLNLRAAE
KMEVASAAGVYVAVGLETGAMEVMRLSSRRAGTRVFDLAKASDRFDRSSS
SCDATVASSRAGNDGPAAGSASGDNLSRPVSGDQNENRRPCRERVVVPRP
PDSPSHTPDEFDDGLARRLRLDRDEVELAEGALSGAAAASTTVAAATVGP
MASALCGWHVPPDCKSSDSWAGRGLVVGFSDTKVATHPFAATPKTPLDHT
FSNAPRRGWGMISESVGGGRSGGKTGGGNEQQVFAVCTMDGCVRCCRIVS
TPEGQPQWKHLWTRQTKEALHSFHRLDCPVGLDSRGQVEEERGSLIVLCS
WSGNTFIFDAEGTPCVAFDAEPYLAGPLTAFVAGNLTTLSSLAGPSLVYL
GTEGKVVAYHGLLGQRDSMVPAQQFIPSLQKDGSIDTLRELLTILANLLQ
WRSNQGDLLFPPTFPPPEARPAGDKELDDIASNAGSDAAAAAAAAAAAAA
AEVDAADALSDDENIALSLPDEVLARAVLCPSGVVVALASTARREDRRKN
TADGGEGGSGVDDHRWRREVHALAKGHGGTITVGEGAAAVERVLREIKAW
ETRGREPTLKNFPCLRGTLEGLTAWGSGPRRESLRRFSLQDQTCGYATEV
PLSAPGSPVGLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031793KICSTOR_ITFG2
IPR028994Integrin_alpha_N