mRNA_P-littoralis_Contig86.140.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig86.140.2
Unique NamemRNA_P-littoralis_Contig86.140.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig86.140.2 vs. uniprot
Match: D8LTF8_ECTSI (Steroid-5-alpha-reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTF8_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 1.200e-101
Identity = 159/218 (72.94%), Postives = 180/218 (82.57%), Query Frame = 1 
Query:    1 LNAKLGWCLMECPNVFMPLWFLLYRADEVKACSQSLPNLALLFMFVLHYVNRHGGWSFIFPLRMRGGRPMPMIVMLSAALFCSVNSYLQCSHLLVSRVYPDSWLRDPRFLIGSATFATGMFINCHSDGILRRLRGSGETGYRIPRGGMFELVSGANFFGECVEWWGFAMAGWSLPAASFALYTVANLVPRARKHHLWYQEKFRGDYPPGRKALIPFVW 654
            L+AKLGW LMECPNV M LWFLLY +DE   C +S  NLALL MFVLHYVNR    SF+FP R RGGRPMP+ +ML  ALF S+NSYLQC+HLL SR+YP+SW  DPRF+IG+ATF+ GMFINC SDGILRRLR  GETGY+IP+GGMF  VSGAN+FGECV W GFA+AGWSLPA +FALYT++NL PRARKHHLWY EKFR  YP GRKAL+PFVW
Sbjct:   51 LDAKLGWILMECPNVLMSLWFLLYGSDET--CLKSPVNLALLSMFVLHYVNR----SFVFPFRTRGGRPMPVPMMLFGALFVSINSYLQCTHLLRSRIYPNSWFGDPRFIIGAATFSAGMFINCQSDGILRRLRRPGETGYKIPQGGMFAYVSGANYFGECVGWIGFAIAGWSLPATAFALYTLSNLAPRARKHHLWYLEKFREGYPAGRKALVPFVW 262
[Close]
BLAST of mRNA_P-littoralis_Contig86.140.2 vs. uniprot
Match: D8LTF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTF9_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 1.900e-100
Identity = 280/613 (45.68%), Postives = 328/613 (53.51%), Query Frame = -1 
Query: 3567 MVLTRKQAWRRVRVVRHVGAHSDTCAVEMTREDSAXXXXXXXKKPLAGDWMRQVTQRPQHRPSEPQTISASP-----REHRSDSSSSXXXXXXXXSASSPNERTALDNWRLPKEGRKPSARPGVSAARRQAMGACVRVGSRVSFNTVVAAILIPSAKDLHSAARQQLW*ARIVYRDFRINFIQFMRSPPEDAA---DVPDVVPVVEIARETKPIAEKDQKTADD----VQQLVVVDAVVYEDAAPGTEEVCAWPVSS--------ADVKNSASSSSLSDADTSXXXXXXXXXXXXXXXXXXXXESVEIAVVGVSCAAXXXXXXXXXXXXXXMSISSDDNGGEGSQD------------GATTAVDATVSDQAVRRQGSTGAISEKSGGSCNLGWSSSDEGNDADEE------------MDDDGNTVRSRRSFSNLETARRGGAG-------LTTAIPSNDLSDFDENSDDVESGSASGSDTGGRRPRALSLDGWFTCGLENGLDTKSYETHDHAGRLRDLVKLDPLPVACATPPLAKSVSYREVDLNDALRRLRLMFDVSVNGD--VAK-MKAYDE---SGHVTGGSQCRPENSGITE--GRELSPSSSTAPA 5228
            M LTRKQAWRRVRVVRH     +T   E       XXX    K+P A DW+RQ+TQRP                   R  RSDSS S        + S   ER ALDNWRLPKEGR PSARPG SAA+RQA  ACVRVGSRVSFNTVVAAILIPSAKDLH+AARQ+LW     YRDFRINFIQFMRSPP  AA   + P++VPV EI  E+K   +++          VQQ VVVDA VYEDA   TE+V AWPV S        + +    SS+SLSD+DTS                    +        +SC                 S++ +                      A  A      D+ V R GS G     S  SC+LGWSS DEGN ADE+                GNT+R RR+FSNLETARRGG         LT  +  +D SD  +           GS     RPRALSLDGWFTCGLENG++ KSYETHDHAGRLRDLVKL PLP  C TPPL  + + +EVDLNDALRRL + F+VSV G   VA+  K+ D+    G   G ++CR E     +   R  SPS++ A A
Sbjct:    1 MPLTRKQAWRRVRVVRHEVVSGETKDDEXXXXXXXXXXCA--KRP-ASDWIRQMTQRPXXXXXXXXXXXXXXXXXXXRTERSDSSDSA-------TRSPERERDALDNWRLPKEGRHPSARPGASAAKRQAAAACVRVGSRVSFNTVVAAILIPSAKDLHAAARQELWWQETDYRDFRINFIQFMRSPPAAAAAAGEGPELVPV-EIVAESKSSQDEEXGKVXXXXXXVQQPVVVDAAVYEDAR-ATEKVRAWPVQSEPELALPPSGLLAKPSSASLSDSDTSPPTPPSEPGTLTSPSDGGESDEPVETAADISCCPASSSLPPVSQEPLPPSLTYEXXXXXXXXXXXXXXXXXXXAPAADIAKGRWQDDEEVERAGS-GVQHGGSSPSCSLGWSSPDEGNTADEDGXXXXXXXXXXXXXXXGNTIRVRRAFSNLETARRGGXXXXXXXXXLTALVSVDDSSDGGDXXXXXX-----GSGRHHDRPRALSLDGWFTCGLENGVNAKSYETHDHAGRLRDLVKLAPLPAVCPTPPLMDANANQEVDLNDALRRLGVTFNVSVKGGDGVARGRKSLDDMGAGGDNGGETKCRAEGDCDDDDVARGFSPSAAAAAA 595
[Close]
BLAST of mRNA_P-littoralis_Contig86.140.2 vs. uniprot
Match: A0A6H5JK69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK69_9PHAE)

HSP 1 Score: 307 bits (787), Expect = 1.200e-86
Identity = 267/607 (43.99%), Postives = 316/607 (52.06%), Query Frame = -1 
Query: 3585 MVLTRKQAWRRVRVVRHVGAHSDTCAVEMTREDSAXXXXXXXKKPLAGDWMRQVTQRPQHR----PSEPQTISASPREHRSDSSSSXXXXXXXXSASSPNERT--ALDNWRLPKEGRKPSARPGVSAARRQAMGACVRVGSRVSFNTVVAAILIPSAKDLHSAARQQLW*ARIVYRDFRINFIQFMRSPPEDAA---DVPDVVPVVEIARETKP----IAEKDQKTADDVQQLVVVDAVVYEDAAPGTEEVCAWPVSSAD----------VKNSASSSSLSDAD-------TSXXXXXXXXXXXXXXXXXXXXESVEIAVVGVSCAAXXXXXXXXXXXXXXMSISSDDNGGEGSQDGATTAVDAT-------VSDQAVRRQGSTGAISEKSGGSCNLGWSSSDEGNDADEEMDDDGNTVRSRRSFSNLETARRGG-------------AGLTTAIPSNDLSDFDENSDDVESGSASGSDTGGR--RPRALSLDGWFTCGLENGLDTKSYETHDHAGRLRDLVKLDPLPVACATPPLAKSVSYREVDLNDALRRLRLMFDVSVNGDVA---KMKAYDE---SGHVTGGSQCRPENSGITE-GRELSPS 5228
            M LTRKQAWR+VRVVRH     +T       E   XXXXX  K+P A DW+RQ+TQRPQ +    PS P    A+ R  RSDSS S         A+   ER   ALDNWRLPKE R PSARPG SAA+RQA  ACVRVGSRVSFNTVVAAILIPSAKDLH+AARQ+LW     YRDFRINFIQFMR+PP  AA   + P++VPV EI  E+K                VQQ VVVDA VYEDA   TE+V AWPV S             K S+++S  S          +                     ESVE A   +SC                 S + ++     S    TT+V A          D+ V R GS G     S  SC+LGWSS+DEGN ADE+ + D                                 +GL+  +  +D SD                  GG   RPRALSLDGWFTCGLENG++ KSYETHDHAGRLRDLVKL PLP  C TPPL  + + +EVDLNDALRRL + F+VSV G  +   + K+ D+    G   G ++C  E     +  R LSPS
Sbjct:    1 MPLTRKQAWRKVRVVRHEVGSGET----KDDEXXXXXXXXCAKRP-ASDWIRQMTQRPQQQLLREPSPPPRTPAA-RTERSDSSDS---------ATRSPERAGDALDNWRLPKERRHPSARPGASAAKRQAAAACVRVGSRVSFNTVVAAILIPSAKDLHAAARQELWWQETDYRDFRINFIQFMRTPPAAAAAAGESPELVPV-EIVAESKSSXXXXXXXXXXXXXXVQQPVVVDAAVYEDAR-ATEKVRAWPVESEPELALPPSGLLAKQSSATSPSSXXXXXXXXXTSPPTPASEPGTLTTSSDGGESDESVETAA-DISCCPALSSLPPVSPEPLPPSSTYEEQSVT-SLSSTTTSVPAADIAMGRWQDDEEVERGGS-GVQHGGSSPSCSLGWSSTDEGNTADEDGEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLSALVSGDDSSDGXXXXXXXXX-------XGGHHDRPRALSLDGWFTCGLENGVNAKSYETHDHAGRLRDLVKLAPLPAVCPTPPLMDANANQEVDLNDALRRLGVTFNVSVKGGDSVSRRRKSLDDVGAGGEDGGETKCHAEGDCDDDIARGLSPS 580
[Close]
BLAST of mRNA_P-littoralis_Contig86.140.2 vs. uniprot
Match: A0A7S2XZJ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZJ2_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.640e-70
Identity = 119/218 (54.59%), Postives = 148/218 (67.89%), Query Frame = 1 
Query:    1 LNAKLGWCLMECPNVFMPLWFLLYRADEVKACSQSLPNLALLFMFVLHYVNRHGGWSFIFPLRMRGGRPMPMIVMLSAALFCSVNSYLQCSHLLVSRVYPDSWLRDPRFLIGSATFATGMFINCHSDGILRRLRGSGETGYRIPRGGMFELVSGANFFGECVEWWGFAMAGWSLPAASFALYTVANLVPRARKHHLWYQEKFRGDYPPGRKALIPFVW 654
            +NAKL W  ME PN+ +    + + + E K    SLPNL L   FV HY+NR    + +FP+RMR G+PMP+ +M+ A  FC +N YLQ  +L   +VY + WL D RFL G   F  G  IN HSDGILR+LR +  +GY+IPRGGMFE VSGANFFGE VEW GF  AGWSLPA +FA +T  N+ PRA +HH WYQ+KF+ DYP  RKALIPF+W
Sbjct:   47 INAKLAWITMEMPNLVLAA--VCFLSGE-KPNLTSLPNLILSSAFVAHYINR----TLVFPMRMRSGKPMPLSIMIMAFTFCCINGYLQARYLCSLKVYNEDWLADGRFLFGITLFLAGFAINMHSDGILRKLRTNNSSGYKIPRGGMFEYVSGANFFGEIVEWTGFTFAGWSLPATAFAFFTFCNIGPRAIQHHEWYQQKFKEDYPKCRKALIPFLW 257
[Close]
BLAST of mRNA_P-littoralis_Contig86.140.2 vs. uniprot
Match: L8GZ51_ACACA (3oxo-5-alpha-steroid 4-dehydrogenase 1, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZ51_ACACA)

HSP 1 Score: 229 bits (585), Expect = 3.930e-64
Identity = 111/216 (51.39%), Postives = 145/216 (67.13%), Query Frame = 1 
Query:    7 AKLGWCLMECPNVFMPLWFLLYRADEVKACSQSLPNLALLFMFVLHYVNRHGGWSFIFPLRMRGGRPMPMIVMLSAALFCSVNSYLQCSHLLVSRVYPDSWLRDPRFLIGSATFATGMFINCHSDGILRRLRGSGETGYRIPRGGMFELVSGANFFGECVEWWGFAMAGWSLPAASFALYTVANLVPRARKHHLWYQEKFRGDYPPGRKALIPFVW 654
            A+L W L ECP+VF+PL  LL+ ++   A    L N  L+ +F++HY+ R    SF+FP  +RGG+P P +++L A +FC  N Y+Q  +     VY D W+ DPRF++G   F  GMFIN  +D ILR LR  GET Y+IPRGGMFE VSGANFFGE +EW GFA+A WS+ A +FA +T +N  PR  +HH WYQ+KF  DYP  RK +IPFVW
Sbjct:   65 ARLAWMLQECPSVFVPLICLLFGSEASLA---GLVNCVLVGLFLVHYIQR----SFVFPFLIRGGKPTPAVLVLMAFVFCLGNGYMQGRYHTRYAVYADDWVYDPRFIVGIVLFFAGMFINIQADSILRNLRKPGETAYKIPRGGMFEYVSGANFFGEILEWTGFALASWSVVAFAFAFFTFSNTGPRGVQHHQWYQKKFN-DYPKTRKGVIPFVW 272
[Close]
BLAST of mRNA_P-littoralis_Contig86.140.2 vs. uniprot
Match: A0A7R9YMR9_DIALT (Hypothetical protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YMR9_DIALT)

HSP 1 Score: 229 bits (585), Expect = 5.930e-64
Identity = 114/217 (52.53%), Postives = 143/217 (65.90%), Query Frame = 1 
Query:    1 LNAKLGWCLMECPNVFMPLWFLLYRADEVKACSQSLPNLALLFMFVLHYVNRHGGWSFIFPLRMRGGRPMPMIVMLSAALFCSVNSYLQCSHLLVSRVYPDSWLRDPRFLIGSATFATGMFINCHSDGILRRLRGSGETGYRIPRGGMFELVSGANFFGECVEWWGFAMAGWSLPAASFALYTVANLVPRARKHHLWYQEKFRGDYPPGRKALIPFV 651
            +N KL W L E P++ +P+ F    A    A + SL N  LL  F  HY+NR    +FIFP+ +RGG+P P+ V + A  FC  N ++Q   L V   YPD+WL DPRF++G A FA GM IN H+D  L RLR  GETGY++PRGG FELVSGANFFGEC+EW GFA+A WS PA +FA+    N+ PRA +HH WY  KF  DYP  R+ALIPF+
Sbjct:   75 VNGKLAWILQEMPSIAIPVAFAC--ATRASAPTSSLANRVLLGAFCAHYLNR----TFIFPMLIRGGKPTPLSVFMMALGFCMTNGWVQARALTVHHTYPDAWLTDPRFVLGLALFAVGMAINIHADLTLIRLRKPGETGYKVPRGGAFELVSGANFFGECLEWTGFAIACWSFPACAFAVRVWCNIGPRALQHHQWYLSKFE-DYPKHRRALIPFL 284
[Close]
BLAST of mRNA_P-littoralis_Contig86.140.2 vs. uniprot
Match: K4FYJ5_CALMI (3-oxo-5-alpha-steroid 4-dehydrogenase n=2 Tax=Callorhinchus milii TaxID=7868 RepID=K4FYJ5_CALMI)

HSP 1 Score: 225 bits (574), Expect = 1.170e-62
Identity = 112/218 (51.38%), Postives = 144/218 (66.06%), Query Frame = 1 
Query:    1 LNAKLGWCLMECPNVFMPLWFLLYRADEVKACSQSLPNLALLFMFVLHYVNRHGGWSFIFPLRMRGGRPMPMIVMLSAALFCSVNSYLQCSHLLVSRVYPDSWLRDPRFLIGSATFATGMFINCHSDGILRRLRGSGETGYRIPRGGMFELVSGANFFGECVEWWGFAMAGWSLPAASFALYTVANLVPRARKHHLWYQEKFRGDYPPGRKALIPFVW 654
            ++ KL WC+ E P + +PL+  L  A    A S   PNL LL MF +HY++R    +F+FP  +RGG+  P I  + A  FC  N YLQ  +L    +YP  W+ DPRFL G A + +G+ +N  SD ILR LR  GETGY+IPRGGMFE V+GANF GE VEW GFA+A WSLP+A+FA++T   L+ RA +HH WY EKF  DYP  RKALIPF++
Sbjct:   62 VHVKLAWCVQEAPAMVLPLYLGLCSAGS--ASSLQRPNLVLLSMFTIHYIHR----AFMFPFLIRGGKATPFIPFILAFTFCVYNGYLQGRYLSRFAIYPADWITDPRFLTGLAVWLSGLLLNVTSDHILRNLRKPGETGYKIPRGGMFEYVTGANFLGEIVEWTGFAIACWSLPSAAFAVFTFMVLISRASQHHRWYLEKFE-DYPTSRKALIPFLY 272
[Close]
BLAST of mRNA_P-littoralis_Contig86.140.2 vs. uniprot
Match: M3XJW8_LATCH (3-oxo-5-alpha-steroid 4-dehydrogenase n=3 Tax=Latimeria TaxID=7896 RepID=M3XJW8_LATCH)

HSP 1 Score: 224 bits (572), Expect = 1.530e-62
Identity = 109/218 (50.00%), Postives = 144/218 (66.06%), Query Frame = 1 
Query:    1 LNAKLGWCLMECPNVFMPLWFLLYRADEVKACSQSLPNLALLFMFVLHYVNRHGGWSFIFPLRMRGGRPMPMIVMLSAALFCSVNSYLQCSHLLVSRVYPDSWLRDPRFLIGSATFATGMFINCHSDGILRRLRGSGETGYRIPRGGMFELVSGANFFGECVEWWGFAMAGWSLPAASFALYTVANLVPRARKHHLWYQEKFRGDYPPGRKALIPFVW 654
            +NAKL W + E P++ +P++ + Y  +   +    LPN  L+ MF+ HY++R    S IFP  +RGG+P+P I+   A +FC  N YLQ  +L    VYP  W+  P FL+G  T+  GM +N HSD ILR LR  GE  Y+IPRGGMFE VSGANFFGE +EW GFA+AGWS  +A+FA++T   L  RA++HH WY EKF  DYP  RKA+IPFV+
Sbjct:   52 VNAKLAWFIQEVPSLVVPVYQVFYTVNNRLS---HLPNQILVTMFICHYMHR----SLIFPFLIRGGKPIPFIIFALAFIFCFCNGYLQARYLTHYAVYPSDWITKPCFLLGCITWLIGMLLNIHSDHILRTLRKPGERDYKIPRGGMFEYVSGANFFGEVLEWTGFAVAGWSTESAAFAVFTFLTLCSRAKQHHRWYLEKFE-DYPKSRKAIIPFVY 261
[Close]
BLAST of mRNA_P-littoralis_Contig86.140.2 vs. uniprot
Match: UPI001E1D2B1C (3-oxo-5-alpha-steroid 4-dehydrogenase 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2B1C)

HSP 1 Score: 224 bits (570), Expect = 3.550e-62
Identity = 105/217 (48.39%), Postives = 146/217 (67.28%), Query Frame = 1 
Query:    1 LNAKLGWCLMECPNVFMPLWFLLYRADEVKACSQSLPNLALLFMFVLHYVNRHGGWSFIFPLRMRGGRPMPMIVMLSAALFCSVNSYLQCSHLLVSRVYPDSWLRDPRFLIGSATFATGMFINCHSDGILRRLRGSGETGYRIPRGGMFELVSGANFFGECVEWWGFAMAGWSLPAASFALYTVANLVPRARKHHLWYQEKFRGDYPPGRKALIPFV 651
            +N K+ W + E P++ +P+WF+ Y A +V      LPN+ L+F+ ++HY+ R    + I+P  +RGG+P P+   + A +FC+VN YLQ   +L    Y ++  + P F+ G   FA GM IN HSD ILR LR  G+TGY+IP+GGMF  VSGANFFGE +EW GFA+A WS+PA +F+++T  N+ PRA  HH +Y+EKF  DYP  RKALIPFV
Sbjct:   60 VNGKIAWFIQELPSLVLPVWFMFYNAPKVT----KLPNIILMFLLIIHYIQR----ACIYPFLIRGGKPFPLGSFVFAVVFCTVNGYLQSYSILFYGDYGENGWKKPHFIFGVVAFAIGMGINVHSDHILRNLRKPGDTGYKIPKGGMFTYVSGANFFGEMLEWAGFALASWSVPALAFSVFTCCNIGPRAIHHHRYYREKFE-DYPTNRKALIPFV 267
[Close]
BLAST of mRNA_P-littoralis_Contig86.140.2 vs. uniprot
Match: A0A1S2ZK67_ERIEU (3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) n=1 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S2ZK67_ERIEU)

HSP 1 Score: 222 bits (565), Expect = 1.030e-61
Identity = 117/217 (53.92%), Postives = 140/217 (64.52%), Query Frame = 1 
Query:    1 LNAKLGWCLMECPNVFMPLWFLLYRADEVKACSQSLPNLALLFMFVLHYVNRHGGWSFIFPLRMRGGRPMPMIVMLSAALFCSVNSYLQCSHLLVSRVYPDSWLRDPRFLIGSATFATGMFINCHSDGILRRLRGSGETGYRIPRGGMFELVSGANFFGECVEWWGFAMAGWSLPAASFALYTVANLVPRARKHHLWYQEKFRGDYPPGRKALIPFV 651
            L A++ W L E P++ +PL  LL RA          PNL LL MFVLHYV R    S IFPL +RGG+P P+ V L A L+C+ N YLQ  +L    VY + WL DPRFL GS  +  G+ IN HSD ILR LR  GETGY+IPRGG+FE VS ANFFGE +EW GFA+A WSL  A F  +T   L PRA +HH WY EKF  +YP  RK +IPF+
Sbjct:   46 LPARVSWVLQELPSLVLPL-LLLLRAPP----GTPTPNLLLLSMFVLHYVQR----SLIFPLLIRGGKPTPVYVFLLAFLYCTFNGYLQGRYLTRHAVYAEDWLTDPRFLGGSLLWLLGLMINLHSDHILRNLREPGETGYKIPRGGLFEYVSTANFFGEVLEWVGFALASWSLQGACFMTFTFLVLYPRAHRHHRWYLEKFE-NYPKSRKIIIPFL 252
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.140.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTF8_ECTSI1.200e-10172.94Steroid-5-alpha-reductase n=1 Tax=Ectocarpus silic... [more]
D8LTF9_ECTSI1.900e-10045.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK69_9PHAE1.200e-8643.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XZJ2_9STRA1.640e-7054.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
L8GZ51_ACACA3.930e-6451.393oxo-5-alpha-steroid 4-dehydrogenase 1, putative n... [more]
A0A7R9YMR9_DIALT5.930e-6452.53Hypothetical protein n=2 Tax=Diacronema lutheri Ta... [more]
K4FYJ5_CALMI1.170e-6251.383-oxo-5-alpha-steroid 4-dehydrogenase n=2 Tax=Call... [more]
M3XJW8_LATCH1.530e-6250.003-oxo-5-alpha-steroid 4-dehydrogenase n=3 Tax=Lati... [more]
UPI001E1D2B1C3.550e-6248.393-oxo-5-alpha-steroid 4-dehydrogenase 1-like n=1 T... [more]
A0A1S2ZK67_ERIEU1.030e-6153.923-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:515472..530459 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTF8
Preferred nameSRD5A1
PFAMsSteroid_dh
Model size5405
Max annot lvl2759|Eukaryota
KEGG rclassRC00145
KEGG koko:K09591,ko:K10901,ko:K12343,ko:K12344,ko:K14570
KEGG ReactionR02208,R02497,R07429,R07447,R08954,R10242
KEGG Pathwayko00140,ko00905,ko01100,ko01110,ko03008,ko03440,ko03460,ko05215,map00140,map00905,map01100,map01110,map03008,map03440,map03460,map05215
KEGG ModuleM00295,M00371,M00414
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0001501,GO:0001505,GO:0001655,GO:0001889,GO:0003006,GO:0003674,GO:0003824,GO:0003865,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006082,GO:0006091,GO:0006629,GO:0006694,GO:0006702,GO:0006706,GO:0006720,GO:0006721,GO:0006725,GO:0006805,GO:0006807,GO:0006950,GO:0007154,GO:0007267,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007530,GO:0007548,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008202,GO:0008207,GO:0008209,GO:0008406,GO:0008584,GO:0008610,GO:0009055,GO:0009056,GO:0009058,GO:0009267,GO:0009410,GO:0009605,GO:0009636,GO:0009719,GO:0009725,GO:0009917,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010268,GO:0010817,GO:0012505,GO:0014070,GO:0014074,GO:0014823,GO:0014850,GO:0016020,GO:0016042,GO:0016101,GO:0016128,GO:0016129,GO:0016131,GO:0016132,GO:0016229,GO:0016491,GO:0016614,GO:0016616,GO:0016627,GO:0016628,GO:0016999,GO:0017144,GO:0018879,GO:0018894,GO:0018958,GO:0018963,GO:0019752,GO:0021510,GO:0021536,GO:0021537,GO:0021543,GO:0021761,GO:0021766,GO:0021794,GO:0021854,GO:0021983,GO:0021987,GO:0022410,GO:0022414,GO:0022900,GO:0023052,GO:0030283,GO:0030431,GO:0030539,GO:0030540,GO:0030900,GO:0031667,GO:0031668,GO:0031669,GO:0031960,GO:0031984,GO:0032354,GO:0032355,GO:0032501,GO:0032502,GO:0032868,GO:0032869,GO:0032870,GO:0033218,GO:0033554,GO:0033574,GO:0033764,GO:0033765,GO:0033993,GO:0034641,GO:0034698,GO:0034754,GO:0035270,GO:0035690,GO:0036094,GO:0036477,GO:0042133,GO:0042175,GO:0042180,GO:0042181,GO:0042221,GO:0042428,GO:0042430,GO:0042445,GO:0042446,GO:0042448,GO:0042493,GO:0042537,GO:0042592,GO:0042594,GO:0042745,GO:0042747,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043168,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043436,GO:0043627,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045137,GO:0046483,GO:0046546,GO:0046660,GO:0046661,GO:0046677,GO:0046683,GO:0048037,GO:0048471,GO:0048511,GO:0048512,GO:0048513,GO:0048545,GO:0048608,GO:0048731,GO:0048732,GO:0048806,GO:0048856,GO:0048878,GO:0050213,GO:0050661,GO:0050662,GO:0050802,GO:0050896,GO:0051384,GO:0051591,GO:0051716,GO:0055088,GO:0055114,GO:0060322,GO:0060348,GO:0060416,GO:0060992,GO:0061008,GO:0061370,GO:0061458,GO:0065007,GO:0065008,GO:0070402,GO:0070848,GO:0070852,GO:0070887,GO:0071310,GO:0071320,GO:0071363,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071392,GO:0071394,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071496,GO:0071548,GO:0071549,GO:0071704,GO:0071867,GO:0071868,GO:0071869,GO:0071870,GO:0071871,GO:0071872,GO:0097159,GO:0097164,GO:0097327,GO:0097458,GO:0098827,GO:0120025,GO:1901160,GO:1901265,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701
Exons12
Evalue1.58e-109
EggNOG OGsKOG1638@1|root,KOG1638@2759|Eukaryota
EC1.3.1.22,3.6.4.12
Description3-oxo-5-alpha-steroid 4-dehydrogenase activity
Cds size630
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03032,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791735.3986955-UTR-P-littoralis_Contig86:515471..5154981680791735.3986955-UTR-P-littoralis_Contig86:515471..515498Pylaiella littoralis U1_48UTRP-littoralis_Contig86 515472..515498 +
1680791735.4924762-UTR-P-littoralis_Contig86:520188..5227561680791735.4924762-UTR-P-littoralis_Contig86:520188..522756Pylaiella littoralis U1_48UTRP-littoralis_Contig86 520189..522756 +
1680791735.5073898-UTR-P-littoralis_Contig86:522917..5235031680791735.5073898-UTR-P-littoralis_Contig86:522917..523503Pylaiella littoralis U1_48UTRP-littoralis_Contig86 522918..523503 +
1680791735.5196264-UTR-P-littoralis_Contig86:523699..5246121680791735.5196264-UTR-P-littoralis_Contig86:523699..524612Pylaiella littoralis U1_48UTRP-littoralis_Contig86 523700..524612 +
1680791735.5330284-UTR-P-littoralis_Contig86:524928..5253631680791735.5330284-UTR-P-littoralis_Contig86:524928..525363Pylaiella littoralis U1_48UTRP-littoralis_Contig86 524929..525363 +
1680791735.546978-UTR-P-littoralis_Contig86:525828..5259901680791735.546978-UTR-P-littoralis_Contig86:525828..525990Pylaiella littoralis U1_48UTRP-littoralis_Contig86 525829..525990 +
1680791735.5587204-UTR-P-littoralis_Contig86:530375..5304591680791735.5587204-UTR-P-littoralis_Contig86:530375..530459Pylaiella littoralis U1_48UTRP-littoralis_Contig86 530376..530459 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791735.4114394-CDS-P-littoralis_Contig86:515498..5156381680791735.4114394-CDS-P-littoralis_Contig86:515498..515638Pylaiella littoralis U1_48CDSP-littoralis_Contig86 515499..515638 +
1680791735.4258986-CDS-P-littoralis_Contig86:516400..5165321680791735.4258986-CDS-P-littoralis_Contig86:516400..516532Pylaiella littoralis U1_48CDSP-littoralis_Contig86 516401..516532 +
1680791735.437248-CDS-P-littoralis_Contig86:516937..5169931680791735.437248-CDS-P-littoralis_Contig86:516937..516993Pylaiella littoralis U1_48CDSP-littoralis_Contig86 516938..516993 +
1680791735.4492016-CDS-P-littoralis_Contig86:517413..5174941680791735.4492016-CDS-P-littoralis_Contig86:517413..517494Pylaiella littoralis U1_48CDSP-littoralis_Contig86 517414..517494 +
1680791735.459561-CDS-P-littoralis_Contig86:517993..5180541680791735.459561-CDS-P-littoralis_Contig86:517993..518054Pylaiella littoralis U1_48CDSP-littoralis_Contig86 517994..518054 +
1680791735.4717665-CDS-P-littoralis_Contig86:518620..5187021680791735.4717665-CDS-P-littoralis_Contig86:518620..518702Pylaiella littoralis U1_48CDSP-littoralis_Contig86 518621..518702 +
1680791735.483414-CDS-P-littoralis_Contig86:520110..5201881680791735.483414-CDS-P-littoralis_Contig86:520110..520188Pylaiella littoralis U1_48CDSP-littoralis_Contig86 520111..520188 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.140.2prot_P-littoralis_Contig86.140.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig86 515499..520188 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig86.140.2

>prot_P-littoralis_Contig86.140.2 ID=prot_P-littoralis_Contig86.140.2|Name=mRNA_P-littoralis_Contig86.140.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=210bp
MECPNVFMPLWFLLYRADEVKACSQSLPNLALLFMFVLHYVNRHGGWSFI
FPLRMRGGRPMPMIVMLSAALFCSVNSYLQCSHLLVSRVYPDSWLRDPRF
LIGSATFATGMFINCHSDGILRRLRGSGETGYRIPRGGMFELVSGANFFG
ECVEWWGFAMAGWSLPAASFALYTVANLVPRARKHHLWYQEKFRGDYPPG
RKALIPFVW*
back to top

mRNA from alignment at P-littoralis_Contig86:515472..530459+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig86.140.2 ID=mRNA_P-littoralis_Contig86.140.2|Name=mRNA_P-littoralis_Contig86.140.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=14988bp|location=Sequence derived from alignment at P-littoralis_Contig86:515472..530459+ (Pylaiella littoralis U1_48)
CTGAACGCGAAGCTAGGGTGGTGCCTCATGGAGTGCCCCAACGTGTTCAT
GCCGTTGTGGTTCCTCCTCTACCGTGCGGATGAGGTCAAGGCCTGCAGCC
AGAGCTTGCCGAACCTCGCTCTGCTGTTCATGTTCGTCCTGCACTACGTC
AACAGGCACGGCGGTTGGTGGATGTACATATCGCATGATATCACGCCGCA
ACCTTCTTTGAATGATCACCATTCTATTCCTCAGGGCACGCCTGCCGATG
GTGCGTCGGGGGAAGTGTGCCCAAGTAGCGCCATGCGCTAAACTTAACTG
TATCGGACATCGTCCGCGGCGCGTCTCGGTTCTTGTTTGCTACAGTACAC
TTTTTTTCGTTGCTGATTTTTGGGCATTATGGTGCCCTCTGCGCTTTGCG
TCGGCTTCTGGCACGGCAGACCTGCGTGAAACAGGAGGCTTCCTTACCTT
GCCTTGCCTTGTCTACTGCTCCCAGTTCCCACGGTGTTTGTCGCAGAATC
GCTAACTCACGTACAAAGGACTCGATTTTTTTGCCGCGGCTGACAAAAAC
TAAGACGAAAACCGTGCGGTTGAAGGGCGGTCGAACGGGTGATTTGGGGT
CGCCTGACTTGCCCCTCCAATCGGGACTGACTCCACTTGTGTCCCGTGGC
TGTGTCCCTTGCGATAAAAACCGGTAGATGGCCTTACTGCGCTGTGCTGC
CATCGTCGGTGCCTCTTTTTGCGATTCCAGTCTAAGTTGGCGTAGTCTTT
TGCGCTCTTTATCATGCTTTATGTTTTCTCCCTACCCCGCTGCTGCAAAA
CCGATCAATGTCGCATCGGGCCAGGTTAGGCGTCCCCCCTTTTGCCTGCA
CTGGGGTGGGATGACCTCTGTTTCGCCGGAATGGTTCCCGCTTCGTTGTC
GCGTCCACCGCACTAAAAAAACGAAGCAGGTCATTTATTTTTCCTCTGCG
CATGCGAGGGGGCCGGCCGATGCCAATGATCGTCATGCTTTCGGCCGCCC
TGTTCTGCAGTGTCAACAGTTACCTGCAGTGCTCCCATCTACTGGTGTCA
CGCGTTTACCCGTAAGTGTGGGAATGTTCTTGGTACTGCTGTACACATGA
AAGCTTGAATATGATGTGATCTGTGTCATTCGATTCATTGTGGCTGAGGA
AGGGCGCCCTTTCGGTATGTGTGTTCTCCCTGCTGCTCCTTGCTGAACGG
TAATAACTCACGATGTGGTACTATTGCAAGCGGGAGTCTCTTGAGGGATG
ACCCGCGTAGGCGGGCGTGCATGCTTGTGCGTCTAGATTTGCCTTTTCAG
AGGGCTGTTCCCGGTACGATGACTGAGTTTGTTTCACGTATAGCCTAATT
TTGCTCCGTTGCCATACCCTTTCCTAGGGGGTACCTTGTGATGCTGTGCG
ATCGACACCGGTTCCAGCTTTTTTGTCTGTTCGCCCTCGTCCGTATTCGT
TGCCCCCCCCGTGCAGCGATTCCTGGCTGCGGGACCCCCGCTTCCTCATC
GGCTCCGCGACATTCGCAACAGGTTATTTTCGTATGACCGTGTTTTTTCT
TGACTCCCAGATAACATGAAACCTTGTTGTCTACCCCTGCTACTTCTGTA
GTACTTTACCGCCCTGATGTTTTTTGGTGCGGACGGCCCATCAAAGTCTT
GAAATAAAATTGGACCAGGATGGCGAGGAAGGACAAAATCGGAATATCGG
TCGTTTCAGATCGCTCAAATCAAGAATTCTAGAGCGTCGGCGCCAACTGA
TTTTGCACATCGTATGTACGCCATCCTGTAATCCTCACGGTACCGTGAGT
CAGCCCTTCGTGTGTCCTTTCCCCCCTCTGACACCTTTTCTGGCTCACCT
TTCGCCTTGATACCAACAGTCGCGGTTGTTCCTTTTCCGTGCTGCTCGCT
ACGTACGGGCTTGAAGACGCCTCCTTGAATGAAACCAAACAGGTATGTTC
ATCAACTGCCACTCGGACGGCATCTTGAGGAGGCTCCGTGGGTCGGGAGA
AACCGGTTACCGGATTCCCAGAGGTAAGCGCAGAAAGAAATACAGGCAGG
GGCAGTCATCTGTTGTGTTGCTTTGCGATGCAGCTGTGCACTTTCACGGA
AGACACGCACCGTAGCTCAACAAATCACCGTCCGTTAGAAATAACGCTCT
TGACTCACAGCTTGTTTTTCGTTGTTGTGATTTGAGAACACCAGCTTGAT
TTAAAGCCTCGCACCAGCCCCCGCCCCCCTATCATTAAAAGTTCCAAGTC
GATGTAAGTGTGATCTTCTTCTCATCTCAACCTTTGTCTGACCCCAAACT
TTGACATGAGAGCCAGTTCGAAAACGGCCAAGATAGGATACACATTTTTG
GATGATACTCCGGTTTGAAAAGACGCACAAAGTATCACATACGCCGATGA
TGTTTATGTTTCAGCGTGTTTGGCGGAGCAATTTTCAATGTATGGGATCG
CTTCCGTTGCAAAGATACCTGCAGATCGGCAACCCCTCTTCCTCCACCGC
ACTGCTGCGTCGGAAATCCCAGGTGGCATGTTCGAGCTGGTATCCGGAGC
CAACTTTTTCGGAGAGTGTGTAGAGTGGTGGGGGTGAGCACCTCACCGCA
CACGGCAACATCTGCGAACTTTTCATGGTTTTACCATCACATTGTGATTT
TACCGCCAAAACATGTAGTGAGCGGCACCTTCTGTATATGTCTATCATAT
TATACATCTTAAGATATTTCTGTGCAAAGCATATAATTCCTTCAAACCAA
CCAATCATCATCCCCCTCGTGAAATTATTTGCATTTAACATGCTACAGGA
AACCCTTGCTCTGCACAACCAAATCCCCGATGGTGACTACAAACAAAGTC
TGCACCCGCGGAGTATACTGATCCGCGTACATGTGTGTAGAACTGCAATC
GTATTAGAATACAGACATTTTTTGTTGGTTCTTTCGCTGATATCGTGTGT
GCATACAGGAATGCGGGAGCCGGGGGAATCGAAGGGTTGGCTGGGAACCG
TGCTCCCTTTCTCTCTCTTTCCATGCCTTCTCTCTCTTACTCTCTCTCTC
TAGACACAATGATGTCACACAATCACATTGTCTTCGCATCTCCCTCTCTC
CAAATGGCGCGTCTTGCTGTCGTTGACGCCTGCTTCGGCATGCGTGCAGG
TTCGCGATGGCGGGGTGGTCCCTGCCCGCAGCGTCGTTCGCCCTCTACAC
CGTCGCCAACCTCGTTCCGCGTGCTCGCAAGGTATGATCTGTATCGTGTG
TGCGAGCAGTAGGATCCCAAAAGGCGTACGATTTGCACATACATATGCTC
GTTCGTATGCGTGTCTCAGTCTCCTCTTGGACTGCCCAAGAAAACCCGTA
TAAGTCGGCTACTACTGCCACTGCTGCTGTTGCAGTCGCACGTGTTGGTC
CCTTAAGGTAGGATTTGAACAACCCTGTGCTGGTGCCCAAACAGACTGAT
GACACTTTTTAAACTTTCAATCATCCGTTTATTTATTTTTGCCCCGCCCG
AGGAGCAGTAAGCTACGGGAGAAACGGTCATAGGTTTGTTTGAATTGTTT
GTGAACGAACGCCACTTGCCTTCCGATGCAAAAGCATCTGTCCGCGCCCC
ATTAAACTAGTTGTAAATACCAAGCAGTTGGATTTCAGTTTCGAGTTGTG
CGCCTGTCCCCTTCGGCCCAACACTAACCCTGCGGCTCAATGTTTACCGC
TAAATGCCACGAGGTATTGTAAGCGAAATAGAGCACGGTGTATACGAGGA
TGCCCTCCCGTGAAATGTGATTTTGATCATTGGTTGAAAACCCCCGAAAA
CCACAACCCTAAGTGAGGTTTTGACCGCGGTGTGGGTTGCGAGGTAGAAA
AATCCGGTGAAAACAAAATGTTGTCCGAGCAAAATCCGGTAAAAAAAAAG
GGTTGTTTTGGCACTCCATACGATCCAATATTTGTTTTCTTCACCAGAAC
CTCGCGATTGCCGAAGCCCACACCCACCAAACTTGCTGTGGCCAGCCTAA
AAATACTGAAGCGCAAGCTCCAACAGGTTTGATGGCGACTGTTGTTGTCC
CAGGGGCCGAATTCTGGTCGGTGCTGTCGCCTGATGTGCTCGGGTTCTCT
CTGCTTTGACATGGGCAGGGGTCGAAAGTCCAGAAGCAAAACCCCGGACG
GTCTCATTATCAGACGAAATACTTAAGTCAAGGGACGAGACAGAGGAGGG
GTGGTGGGAAGCAGTGGGTTGAGGGCGTGCAGCTTGGTGAGCGCTTGCCC
TGAATAAAAGTATTCGCCTTTTTTTTCACCTTTCTCTGCTTGAAATCTTC
CGAACGTGCAATGCATCCCTCAATATTCTCACTACGCAAGAGATTCTACC
TGCTTCCCGACCTCTTTCACACAAAGTCGAAATGCTAAATGAATACTGTT
GCCTTAGAGGGAACCCCATTTTCCCGAAAAACGTTGCGGAGCACGCATGT
ACGATACGTTTACCTGTAATCTAACGATTAGTGCGCCCCCCCCGGCCGCA
TCCCCCCCTCACCCTTCCGGTCGCCGCCCCCACGGCGCTGTATGCCCGCC
TCCGAACACTGGAAACGCGTCATACACCAACGGGTTCATCATGATGCAAA
ATGCGTACGCAACGCATGTGGGCGTGCGTACCGTGCCAGCATCATCTGTG
GTACCAGGAGAAGTTTCGTGGGGACTACCCGCCAGGAAGAAAAGCATTGA
TACCGTTCGTCTGGTGACCAAGAAGCAAAAATAACCAAAAGAGCTGATGA
TGTCGCTGTACTTGAACTTGACGGTGTTTCGGACGACGAAAGTAGAGAGA
ACTTACAAATAAATGTATAAAAACGTGCCTCTTTACGCAGGAAAATACTT
CGTAGTACAAGTATGTACGTACGCGTGTATGCGTCACGTGTGCCTGCAGG
GTACTCTAAGAAATATACCGTTGACGTCATGGACGTTTGCACACCCTTCC
AAACCGACTTTTCTTGCTCGACAACACGTATCACGGGGAAGATATAGCGT
TGCTACGCGGAGAAATCGTGCATCGTATGACATTGAAGCCGTGTGTAGCC
TTGTACTTGGCGGAAGCTTTGACCAGTCTATACTTGAGGTGTGTGGTGGT
GCCCGCGCATGCGTGCGTCAGCCCTCTTTTTCGTTGCCTGATAACGCGGA
TAGGGAAAACTTGTACCAGCGGGCGTTCCAAGCAGGCACCACTATCTTCC
GCCTTGTAATATTCACAAGCAGTAGCGACGAGATTCCGCTGCTGACTGCT
GTGTTTTTCGTACGATATCGCCATCATGGGTGACGGAAAAAATTTACAAG
TTGTTGTGCTCCCACAATATACTCAAAATCTACCAAATGACCCACATTCT
TGTGATTTTAATTTTACAGCCCTCACTCGCTGTTAAATACTGCCAATTGT
CTGTGTCAACACACGTCATATGTATCCGTCCGGAAGAATGAAAAACAAAA
ACGACGCAGTTTCTGTGACTGCTACGGGCAAACAAAAATAGGAATCAGTC
GCGTTCCATGCATGCATGATGAGTTTGGTTCGAACGCTTACGTTCGCAAG
TAAGACGACATACAGAAAAAAGGTAAATAGACAGTGAACAACAAATATTG
ATGTGACATGACCTGCCCTGCGAAAAGAGAAGGATGTTTGACACCTTCAA
CCAAGTCTCCTTTCTGCGTGGGCCCCCAAGTAAGTGGCGAGCTCGTGGCT
CTAGCTTTGGACAACCCATCACAACACTTCTCAAACGCTCCAAAAGCGTC
CGCCCTCTTGCCACACAAAACATGGACAAACTTGTTGCTCAAACCTTGGA
CCAGCCCATCACAACACCTTTTACACTCCGCTGCACGCATCCGCTCTTGT
CAACACACCAACCAATCTACCACCGAACGGAAGGAATTCTCTTATACCTA
TAAAACCACCATGCCTGCCTGCCACGCCTTCGCTCGCACGAGGGTACTAA
AATACAAACACTCGAGACATGGACCATAATCCATCAGGAAAGCAGGGGAA
ACAGCCACACACATGATGATCCGTCATCCATCGATCTCACTGGGAAATAA
TAAGCCCGAGCGAAAATCAAAACAAACATGAATTCAGCGACGGATAAAAA
AAAAAAAAAAGACGAACGTGATCGATGCTCACTTCACTTTCACCGTCCTT
CTCCTCTACGAATGAGCACCCGAAACAGCGGCCCTGAAACGACCAATTAC
AGCATGATGCTGTTCTGTCGGCTGTGACAGGGCTTATCTCCAGGGAGGTC
TAAAATAACTATTTGACTATCTAGATTTAACCCGGTATGCACAATGAGGC
CTAGTACATACGAAGTATATGCGCCCAATTACTAAATGTGACGCGTGCAC
CACAATTAGTCAAGCCTGTTATTTTGATGAAATCCATCACCACACCCAGA
GCGTGTCACCAACGACCAAAAACACATCATGGAAATGTCGATTTATCTCT
CTCCTCTACCAACTTTTCCCACACAAGAGTAAACCGGCGATACTCCGGTT
TCCCTCCCTCCCCCTCCGAAACCTCTCAGCGCAGAAATCAGCCACGAATG
TCGGCAACATCTTGTGTGAGCCTCAGGGTTATAGCGTAATAGGGACGATC
CTCGGGAATACCGCAGGTTACGAAAAAACAAACGAGTACGCATGCGTCAA
CGTGGGTGCAGGCTGTGCTGTGCTGTGTGAAAAAAAAACGGCTAGGTTTC
TTCTCGCTCACAGCACATTATTGCAACGGCCACCGCAACACATACTTCGA
AGTACCATCTACAAAAAAAAGTCCACGCTCCGCTCACCCAACATGTCGCC
CCACCGGCACGTTTCGCACCTTTGAGTGACTTGCCACCTTCACGTCAAGT
GTTGGTGACATGCGACGCTGTTACAACGGTCGGGACGAACCAACACCCAC
CCCCCCGCGCGTGACCATTCTTCGAACACGCCACCAAAAACTGAACTGGA
CCACCCAACCAATTTGCACAACGCGCACGCCCCAGACCCGAAAAAGAGCA
AAAATGCCTGTTGAACAGAAACACGCTTCCATATCACTCCCCCCCCCTGA
CCGCGAGAAAAGGACCGGTTTACCGCCTTGTAGCAGACTACAAAAACATT
TAGTCTCTTTCTATCCCGCGACGTCTCGATGTGAACAAAATAGGCTCAAA
CCTCTCCTTCCAACCTCTAATTTCGGGACGTTTCACCCGCTGTAACGTAG
TAAAAATAACAGCAGTACTTTTTACATCGACACCCCCATCACTCCCGCTG
CAAGACACACACAAGCACAGCCGCCGGCTTGTCAGGCGAGACTCGCGCAT
TCTTCACGACAACGACAGTGAATGCAGTTTGGGGAAAAGAGGGAGAAGGA
GCATTTGCAAAAAATAAAGTAAAAGACACACGCCTCCTTGTCAAATTGTT
CTCCGCCGGAAGGGCAGGGGGCCCACCCGACCGGTCGGCTTGTCAGGCGA
GACTCGCGCATTCTTCACGACAACGACAGTGAATGCAGTTTGGGGAAAAG
AGGGAGAAGGAGCATTTGCAAAAAATAAAGTAAAAGACACACGCCTCCTT
GTCAAATTGTTCTCTGCCGGAAGGGCAGGGGGCCCACCCGACCGCATCAA
CTCCCCTTGGTTTCACCTTCGTGCTCGTAACTAAAGCGTTACCACGACAA
ATCGTCATTTCCTCGCATCACACAGCCACAAGAAGGTGCGAAGTCGGCAA
GCTCTCTCGTCTTGTGGCCGATGTGTTGCTTCCGTGTCATGCAGGGAAAG
AAGCCTAGCTGAAGGAATTCGAGCCCGCAGCGGAAGCAGCCGGCGCCGTC
GAGGAAGAGGGAGATAATTCTCTTCCCTCGGTAATGCCACTGTTCTCTGG
CCGACACTGGGAACCTCCGGTGACGTGACCGCTCTCGTCGTACGCCTTCA
TCTTCGCGACGTCGCCGTTGACGCTTACGTCGAACATCAGACGAAGTCGA
CGGAGTGCATCATTGAGATCAACCTCTCGGTAAGATACCGATTTCGCCAG
GGGCGGGGTGGCGCAGGCGACTGGTAACGGATCCTGTAGGGAAATAAATC
AGCGGTGGCGAACGGACCGGACAAGTGAAGAAGAGGAAAAGGTGGGCTGG
TCAGATGCGAACGGAGTAAAGAACACGTGTCGGAGATTCGAAGAGACAGA
ACACGGCAACTCAAGACCGGTGGGCAAATCAGTCGCAGCCAGAGAGCGAA
AAGTGCAACGTATCCTAACGTCAACTCACCAACTTTACCAGGTCTCGTAG
GCGGCCTGCGTGGTCGTGCGTTTCGTAAGACTTTGTGTCCAATCCGTTCT
CCAGCCCACAGGTGAACCAGCCGTCGAGCGAGAGCGCCCGCGGCCGCCTT
CCGCCCGTGTCGCTGCCGCTGGCGCTCCCGCTCTCGACGTCGTCGCTGTT
TTCGTCGAAATCGCTCAGGTCGTTCGACGGGATCGCGGTGGTGAGGCCGG
CCCCACCCCTCCTTGCCGTCTCGAGGTTAGAAAAGGATCGCCGCGAGCGG
ACGGTGTTGCCGTCGTCATCCATCTCTTCGTCGGCGTCGTTGCCTTCGTC
ACTGGAGGACCACCCGAGGTTGCAGGAACCGCCGCTCTTCTCCGAGATGG
CGCCCGTGCTGCCCTGTCGGCGGACCGCCTGGTCGCTCACCGTGGCATCT
ACTGCTGTTGTTGCGCCGTCTTGGCTTCCTTCGCCACCGTTGTCGTCGGA
CGATATTGACATTGTTGAAGATGACAGCAGCGGCAGCGGCGGGGGCTTCG
AGGACGCCGCGCAAGAAACTCCGACCACAGCTATCTCGACAGATTCGTCA
CTTTCGTCGCCGTTAGATGACGTCGGAGTTTCCTGTTCCACCGGCGGTGT
AGGCGGCGAGGTGTCCGCGTCCGACAGACTCGACGACGACGCGGAATTCT
TGACATCGGCGGAGGAGACGGGCCACGCGCACACCTCTTCCGTGCCTGGT
GCTGCGTCCTCATACACAACGGCGTCCACAACAACCAGCTGTTGAACATC
GTCCGCCGTCTTTTGATCCTTTTCGGCGATTGGCTTGGTCTCTCTCGCGA
TTTCAACAACGGGCACTACGTCAGGGACGTCTGCCGCGTCCTCGGGCGGT
GACCGCATGAACTGGATGAAGTTGATGCGAAAGTCCCGGTAGTCCGTCTC
TTGCCACCTGAAATTTCGGACAAGGGAGGAGAAAATACGTCGAGTCAGAC
AAGCAATATAAGGGCGCACACTGAACACGCATTGAAAGGGGATTCTGTAT
CGTATGATCAAGGACGAAAAAGAAAACCTCACCACCGCCCCGAATGTCAT
GTCTCCCTTCGCGTGAGCTTTCAGTGAGTCCTACATCGCATAGACCACTA
CTGCTGTACGGGCGAGCAGACTGCTTTCTTTGCCTCTGGCTAGACATGAC
TGTCCCCACCCGATCCTCCTGAATCAAGCAAAACAAGCCACACTCTACCT
GAAAGAGGACAATTCTTGCTCACCACAGCTGCTGGCGCGCGGCCGAGTGC
AGGTCTTTCGCGGAGGGGATGAGGATCGCCGCCACAACTGTATTGAACGA
CACGCGAGACCCGACGCGTACGCACGCACCCATCGCCTGTCTCCTGGCGG
CGCTAACTCCGGGTCGCGCCGACGGTTTCCTCCCCTCTTTAGGCAGTCTC
CAGTTGTCGAGCGCGGTTCTCTCGTTGGGTGATGACGCGCTACTGCCACA
GCTGCTGCTGCCGTCGCTGCTGCTGCTGTCGCTTCGATGTTCACGGGGAG
AAGCTGATATCGTTTGCGGCTCTGAAGGTCTGTGCTGTGGTCGCTGGGTC
ACTTGACGCATCCAGTCACCCGCAAGTGGTTTCTTCGCTGCAGCGGCGGC
GGCTGCGGCGGAATCTTCTCTCGTCATCTCGACAGCACAAGTCTGAAAAA
AAGAAAACAGGACGGCGTCAACAACGCGGTGTCAGGGGGTTCAAAAAAGG
GCATTCCGAGATACCTTGAAATTTGGTGATGACCGTAACGGGTTCGGACA
GTGAGATATCGCGGTGTTCTGTTCAGCGATGAAGAACCAACCTTGGGTTC
ACAATTACCTGAGGCATGGCGCACTGGACGTCACTCCGTGCGTTGCGCCA
GAAACACAACGTGTCGACACGCACGTTCGGTAAAAAGACCTCATGGTTTG
TGTGGGCTACTGCTGCTGTCTGGGAGTTTTGACTGACACGTTTGTATGAC
CACGATGTACAAAAGGAGTGCGCTCGGGGTGCAAGTGGTAATTTGCAAGA
AGTTTCATTTGTGTGCTTGCGGTTTCGTTTTGTTTGGTGTTTGTCGTTCG
CGACGGCGTGTGTGTGTGAAGGGAGGGGGGGGGTGCTCCACGAGTAACTA
TACTCACGTCGGAGTGAGCGCCAACATGCCGCACGACTCGTACTCTCCTC
CACGCCTGCTTCCTTGTTAAAACCATCTTTCACGTTGAAGGGGGCCGGCC
GTCCAACTGCGCTCCGGTCAAGGGACAGGTTGCGTTGGCGGCGACAGGAA
CTGGTGCCGGAGAACGCAGCTACACGGGAGGAAAAGAGGGCCGAGAGGGA
GTGGGCAGAGGAGGGGGAGGTTTGTGAAAAAAATAGACTTGGACGATACG
AGGAAACGATGCCAGTATGATACATCCACACAGCAGGGGCCGTGACGCAG
ATTCTAGGGTATCCACCAGAATTTTTTTTCGCTTCTAAAACGTTTTTGCT
CAAATTCACGTCTTTCCAATTCCGCTGCACATTTAAAAACGGTTGTTTGC
TCCAAGGATGCGCGTAGTTTTTTCTCAGGAAAGGTGTGTTTTTTTACGCT
TTCGCTGTTTTGACCTTTCCGTTCGGATCTTGCTGGATGGTATGAACCAG
CGGGGACAAGAGAGATGATATGAAACACGTGGTGCTGCTGTATGCACGCA
CGATGCACAGCAGTACTTGTACACGTATTGAACAACAACGACAGAACAAG
CAAAAGGAAGAACACAACGATGCTACCGCTGCTGCTGCTGCTGCTGTAGT
TTAGCACACCACGGGCAAAGACAGTATACGACGGGCATCCCACAGCAACC
TTTCACCCAAGGTATAGCAACTTGTACGCCAGCAAGGGTGTACCCCTAGC
ACACACGTCGTACGTGAGTCTGCTGTGCACATAGCTTGGTGATAATTTCC
TGTCTTCTTGGTGTTTCCCACGCGATGATGACACGGCAGCAGCTGTGAGG
ACCAGCACCAGCGCCACCACCACCCACCCGCAGCGGCGGTCACAGACACA
TGCATCTACCTGTCTTGTCTGTACAACTGTAGTACTGTCTATACAGACAG
CTAGCTGTGTGATGCTGCGCCACGCCTCGGCTTGCACAGGGTGGGTTGGA
ACCGCTCGCCGCTGCTCCGTCTGGTGGTTTTGCTTCTCTGCTAGTCACTG
CTCATGCTACAAAATGCGATTCCTTCGCGGTCAAAATACAACACACACAA
CAACACATACATGCTGCTATACCTTGCTCCTGCTGTTCGTGCGTGGGTGA
CGATGCGCTATGACCTCGACTTTCGCGGGGTGAAGCAGAACCGCTGCTAC
GGCGTAGTGTATGTATGTTGTTTCCTGTGTCTCACCCCTCGTGTTCAAGT
AGTATCATACGAAGTACTCCGAGTAATACACAATAATACAGCAATGACAC
GCGTATCTCCGTCAAGTGTTCGTATTTTCCAACGACGACATAAAACGACT
CTTTATGGTGGCCGCCAACTGCCAAGAGCTACAAGCGGCCCGATTATGAA
AAGCGTAAATTTCAACCGTCACTGAGGAAAAGCGTGAACCCAAAAGCGTA
TATTGTAAGACGCGTTCTGGTGGAAACCCTATATTTTCAACTCGAATCAG
TGCCTCTCTTGCACAGGTGATGCTGTTGGAAACCCTCTTCACCAGGTACT
CTGAACCAGGTCCCAGCAATTAAACCTCACTTGCTTCGTGGAAGCTTGCG
AGATGCTGAGCAGCAGTACAACAGGGCACCTGGTACACGCGGCCATCCTG
GGGTACCTGGTACAGAAAAGAGCCGCTTCGCCAGATCACAAGTCTACACT
CAACTGCAGTAATCGGACGAAGTTAACGTCTCGTCGTGCAGCTTCGTACC
ACCATGACAGCGGACGAGGGCGTTTTCGCACGCAAGATGAAATTTTCAAT
ATGCACGCCCTCGAGCTTTCCTCATGTTCCCGCCGACGTCAGACGTCACC
AGCCATCAATCCTGAAAGTACGGACAGCAGTGCTGCTTTTGCAAAAGTAG
CACTGCTGTCTGTGTAATACCTGGTACTTAAAAAACTGTTGAATTTTCAT
TTCATTTTTTGTACAAAGAAGAGTAGAAGTATTGTTTTTCCAACGAGACA
TCAAATTCTACGTAGAGTATTTCTCTAGACCGGATCTGGAGAAGATCTTC
CACTTACAGCAGTAATTGCACACGGAGCAGTTCGTAATTCGTGCATCCAC
CTAAGTTTCTAGAACGTATTAGAGCAGGGATTAACGGAAGGCAAAAAAAA
CGAAATACTGTAGCGGAAACAAAAACGAAATAACTTTTTTCTTCAAGAAA
AAAATAAAAAACTCCATTTTGGTATTATCGCGTTTCTGCTGGAGGAGCTG
GAGCAGCGGAATAGAGGAGATAACGCCAAAAATGATGTAAACCCAGAACG
CGCGGGGCCCAATTTCAAATAACGCGGTGGAATGCATCGCGTCAGCGTGT
GGGTATCGTAGACGGCCGTGTGCTGTCTGTTGCACTGACTGGCGGGTATG
ACGGCTTGGCGCTGTCTGCTGCGCTGCTGTAGTGTGTGGATTGGGCCTTG
CTCTGTTCGGCTTGGTGCCTGTTGCACCGCCGTGTACCGTAGTCGCAGTC
TGTGTGAAGAAGTTCGCTGCCTGGGAGGCTCATGGGCAAGCCTCCCAGGT
TACCAAACTCCATGCATTTCGTTTTCGTTTTCGCAAAAAAAAAGGTCCGA
AAGACTTTATTTTTGCGAAATCAAAAACGAAGGAACGCCTCCCCGGAGGA
CGTTGAAACGAAAACATGCCTCTTTCGTTTTTTTTACCCCACCAATCAGA
GCCCAATTTCGTTTTCGTTTTCGCTACAGTAGCGGCTACGGTTTAACGGA
AAATGTTTAAGAGAAAGTACCGATTTAAGAGAGTAAAACGGCTTGGCACG
CCCAAAATCGATTTAAGAGAAAATGTAGCATATTTCTGAGATTTTCTCTT
AAATCGAGCTTCTGGAGGCCACGTCACATAGCCATCACCACATAGACCAC
ACACACAGCAGCTGCCGACACCCTAACCCTAGGTCCCGTGTTGCAGTTCT
CTAGAAGAGGTGCGAGTATGCGGCAAACCTATCACTGACAAAACGAAATA
TGTATAGATGTGTATACAGTATCCACGCGCACTAGTGTGTCGCACTACAA
AGGTACAGCAGTGTACCACGTACTTCGGTCTTGAAGTGCTCGCCATCCGA
CAGATGAAGCGGCGTGTGGAGCGAACCGAAGGTGCTCTGACGCTAGCTGC
GCAATGTAACATTGATGATACGCTCTCTTCATGACCATTTTAGGCATTAC
TAGTCTAGCTGGGACGTGAGAGTCCCTGTTTCACGACCTTCAGTTTTGGC
TACGGTATAAGAGAATACTCTGTTATACCGTAGCCAAAACGATACAACAG
AAAGCACGATTTAAGAGAATAACACTGGGTTGTCCCGACCCTCTCTTAAA
CCGTAGCCGCTACTGGATTTCGTTTTTTTTGGCCTTCCGTTAATAGGGGC
TCTTACAGTATGTCATCTACTGCTGTACGAGTACAGAAGTCGCAACTCAA
AACTTTTGTGATACAGGTAATTTCTTTCGTGTGTAGCATGTCGACAGAAA
TCTACGGCAGTACCACAGTATGAGGAGTACTGAACCTGGTACGAAATGCA
CTGGCTGTACAACGCTTGCCCATGTTCGGGGATACGATACAAACGATACA
TAAACGCCTGTGAAACAACAGCAGTCGCAGGAGCGGGATCTTGTTGACTC
TTCCCAAATACACCGCACCTATACGGGTCATATGTCGGCTGTCGGGGCGT
CGTGGGGAACGGACAAGCCCGAGATGTGTACTGGAACTTTTTTTGCAGCG
CGTTGCGTCCTGATGCCCAAAACAGGAATCGCCAAGCCTAGCCAAATGCT
GTATTCTGTACGTGTATGCGACATGAATCCAAAGTTTTCAAACTCCTATC
CAAAGATTTCATCATGAGGACAGCTGCACGTGCACACAAGAGGGACACGT
AAGCAGTGAGGCACTACAAGTAGAGAATGATGAGGAAAGAAAATGCGGTA
GACCGGGAGAAAAAAAAAAGCCATGGTGTAGGTGAGGGTTGTTTTTTTCA
TCAGCTGGCCTTTCTCCGGTGGAGTCGATTTTTGTCTTTTGCACAATTGA
CGGCATATCTTGCGGCTCAGGGCTGGCCGAAAATCAAGACCACTGACAAT
TTCGATGCCCAGGCAACTGCAGTGAGCGGAGGATGCGCGCGGGCGGGAGA
CGCATCGAGGGTCTTGGGGGCTTTGCACAGGCCAAGCTATGTAGGGTCCA
ACACGAGCTCACACGTTCCGAGAGTTTTGACATGAAAGATCGATTTCAAA
TCTGATCAAAAAAGCATCCATCCGAGATCCCCGGGCCCGCTACACAGTTG
AGATTACTCACGCCCTTTACGACTGTGGTGCCACCGCCCTTTGCGACAAC
ATGGTGCCACCTTTCCGCGGCCGTACCGACTCGTGCAACGAACGACGCCG
GTGAAGACGCGGGGACAACGATTTGTGTACGAATACAAGGTTGTATGATC
GAGATAATCCGAACATTGTGGCCTCCTTTTGGCCTGTGTTGGGATCATCG
TTGTCCCCCGAAGCACCAATCGCTCACAGTCATTTAAAAGAATGTAAGAC
GCACCTAATGTCGCTCTGATCGTAGCCTGGTGTTGTGTGCGATGATCCTC
CAGGCGGACAGGGCTGCTGTTGTGGCTTGACACAAATG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig86:515472..530459+

>mRNA_P-littoralis_Contig86.140.2 ID=mRNA_P-littoralis_Contig86.140.2|Name=mRNA_P-littoralis_Contig86.140.2|organism=Pylaiella littoralis U1_48|type=CDS|length=630bp|location=Sequence derived from alignment at P-littoralis_Contig86:515472..530459+ (Pylaiella littoralis U1_48)
ATGGAGTGCCCCAACGTGTTCATGCCGTTGTGGTTCCTCCTCTACCGTGC
GGATGAGGTCAAGGCCTGCAGCCAGAGCTTGCCGAACCTCGCTCTGCTGT
TCATGTTCGTCCTGCACTACGTCAACAGGCACGGCGGTTGGTCATTTATT
TTTCCTCTGCGCATGCGAGGGGGCCGGCCGATGCCAATGATCGTCATGCT
TTCGGCCGCCCTGTTCTGCAGTGTCAACAGTTACCTGCAGTGCTCCCATC
TACTGGTGTCACGCGTTTACCCCGATTCCTGGCTGCGGGACCCCCGCTTC
CTCATCGGCTCCGCGACATTCGCAACAGGTATGTTCATCAACTGCCACTC
GGACGGCATCTTGAGGAGGCTCCGTGGGTCGGGAGAAACCGGTTACCGGA
TTCCCAGAGGTGGCATGTTCGAGCTGGTATCCGGAGCCAACTTTTTCGGA
GAGTGTGTAGAGTGGTGGGGGTTCGCGATGGCGGGGTGGTCCCTGCCCGC
AGCGTCGTTCGCCCTCTACACCGTCGCCAACCTCGTTCCGCGTGCTCGCA
AGCATCATCTGTGGTACCAGGAGAAGTTTCGTGGGGACTACCCGCCAGGA
AGAAAAGCATTGATACCGTTCGTCTGGTGA
back to top