prot_P-littoralis_Contig86.134.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig86.134.5
Unique Name	prot_P-littoralis_Contig86.134.5
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	310

Homology

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BLAST of mRNA_P-littoralis_Contig86.134.5 vs. uniprot
Match: D8LTF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTF5_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 1.120e-66
Identity = 150/313 (47.92%), Postives = 183/313 (58.47%), Query Frame = 0

Query:    1 MRPYGVLQLL---GVLAVVGWSNGFVPHTVRVTPKLRRLDAVSARNRNISSKNSGSKSSKAYASSAATRDRRATPSKPPAKATPSLASLIGSWFNLPSQQLSPTRSSGVIAGGQTRGDALRAEISRLRASNAELREEVVALRKSMVDRGYTPVDDIFWTTKXXXXXXXXXXXXXXXXXXXXXNSEPPLAKLPPEVRLAALALLYGAAVALGGVFVPIAIGVGAARSLRWLDDGGTLMPKKWRRHFFLGGSRGQPWEARSGRRWRNA-VPSYVPALARMPRGEHLGGSGDGDEDGLMNAEALADAWDKMYPPRQ 309
            MRP  VL+LL   G L ++G ++GFV       P + RL A    N   SSK+ G+K   A   + A+R  R+ P++P  + TP LA ++ SWFNLP +  SP   SG      TR D +RA+I +LR SNA+LREEV+ALR SMV RG+ PVDD+F T                           P AKL  E RLAAL +L+GAAVALGGVFVPIAIGVGAARSLRWLD+GGTL+PK+W R                GR WR A   S+VP LAR PR       G G  +GL+  EALADAWD+MYPPRQ
Sbjct:    1 MRPLHVLELLHVLGFLTILGGADGFVFGAASAKPGVLRLGAART-NDGDSSKSGGAK---ARDLAVASRHSRSPPAQP-LQQTPWLADIMASWFNLPLRNTSP---SGGTKRRSTRDD-IRADILKLRVSNADLREEVLALRNSMVQRGFFPVDDVFATATATATGGTPASGNGQQPPTSEGGDPKPPAKLQREARLAALVVLWGAAVALGGVFVPIAIGVGAARSLRWLDNGGTLVPKRWSRPL--------------GRGWRRARALSFVPVLARPPR------DGGGGGEGLVTGEALADAWDEMYPPRQ 284

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig86.134.5 vs. uniprot

BLAST of mRNA_P-littoralis_Contig86.134.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LTF5_ECTSI	1.120e-66	47.92	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 114..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..81

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig86	contig	P-littoralis_Contig86:490950..495349 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig86.134.5	mRNA_P-littoralis_Contig86.134.5	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig86 483969..496026 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig86.134.5 ID=prot_P-littoralis_Contig86.134.5|Name=mRNA_P-littoralis_Contig86.134.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=310bp
MRPYGVLQLLGVLAVVGWSNGFVPHTVRVTPKLRRLDAVSARNRNISSKN
SGSKSSKAYASSAATRDRRATPSKPPAKATPSLASLIGSWFNLPSQQLSP
TRSSGVIAGGQTRGDALRAEISRLRASNAELREEVVALRKSMVDRGYTPV
DDIFWTTKPPPPETVAVMPQQQPTTSNSDNSEPPLAKLPPEVRLAALALL
YGAAVALGGVFVPIAIGVGAARSLRWLDDGGTLMPKKWRRHFFLGGSRGQ
PWEARSGRRWRNAVPSYVPALARMPRGEHLGGSGDGDEDGLMNAEALADA
WDKMYPPRQ*