mRNA_P-littoralis_Contig859.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig859.1.1
Unique NamemRNA_P-littoralis_Contig859.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig859.1.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 1.710e-59
Identity = 149/378 (39.42%), Postives = 202/378 (53.44%), Query Frame = 3
Query:  714 LVGYVLQARTAKADPNPPTPAALRKDVFRQELDQVDLNKEDDAARMAVCRAAGKIAHHDVQGQKVLKNAPRKEQPHNYAEELENPMRRVLESL-AALPSTLSSAYSEHNKYALVR------LDRTTRGWGQRTRLGVGRDLDRPGTIECHSRQ*GHEEPRRQQGRRCRPCWTRPHTQKQPRETVVSSSG*M-MSTVVVKAILGAQYRYLATHAIKGAQWAKAKGTCREVIDFCAEHGRWATTSRVGHRESFHATIV*EEYLLPKNATCAAIPHDNCDFDPRIGERQGEGAHISTIAASAVTVEPEVGRLEDASKLRPRRSLTLDDIITGS--DAEGSEWRYQTFMMELQRAVFNSASMRLSGSSVSTCMEAELRKVIS 1817
            LV  +L+AR       P    A +    +  L +V+ N ED  ARM+V RAAG I   DV+    LKN P   + H YA+EL+  ++   E+L  A P  L   Y      AL R       +     W  +T    GR     G +E        ++  R             H     R+   +    + M TVVVKAIL  + R++ +H IKGAQWAK+KGTCR+VI+F AE+G WATTS++ HRE FHA  V ++ LL ++A CAAIP DNCDFDPR+G  QGEG H+  IAA+A+TV P+VGR++D   ++ R SLT++D++ G   D E    RY  F  EL R VF  A      ++  TC E+ELR  I+
Sbjct:  503 LVDLMLRARRNAPVQPPSNQLADKGGSLKSILREVEKNTEDADARMSVVRAAGTIVRADVESDPALKNTPGTREKHRYADELDMKVKPPRETLLTAFPPALVGLYQSMTNMALYREIIASETEYPGEAWVWQTEGRDGRHPTTSGDLEGEDGDGEKKDEAR-------------HIDSLNRDRRSTHRRLLVMCTVVVKAIL--RGRHMGSHDIKGAQWAKSKGTCRDVINFVAEYGLWATTSQIQHREDFHARFVEDKDLLSRDAECAAIPLDNCDFDPRVGVGQGEGPHLPFIAATALTVGPDVGRMDDWWMVKSRGSLTVEDVLMGPERDREDGARRYNEFSSELYRGVFAEARNNSDRAAADTCFESELRTAIT 865          
BLAST of mRNA_P-littoralis_Contig859.1.1 vs. uniprot
Match: A0A6H5KSG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG4_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 3.560e-59
Identity = 142/374 (37.97%), Postives = 204/374 (54.55%), Query Frame = 3
Query:  714 LVGYVLQARTAKADPNPPTPAALRKDVFRQELDQVDLNKEDDAARMAVCRAAGKIAHHDVQGQKVLKNAPRKEQPHNYAEELENPMRRVLESL-AALPSTLSSAYSEHNKYALVR------LDRTTRGWGQRTRLGVGRDLDRPGTIECHSRQ*GHEEPRRQQGRRCRPCWTRPHTQKQPRETVVSSSG*MMSTVVVKAILGAQYRYLATHAIKGAQWAKAKGTCREVIDFCAEHGRWATTSRVGHRESFHATIV*EEYLLPKNATCAAIPHDNCDFDPRIGERQGEGAHISTIAASAVTVEPEVGRLEDASKLRPRRSLTLDDIITGSDAEGSEW--RYQTFMMELQRAVFNSASMRLSGSSVSTCMEAELRK 1808
            LV  +L+AR +     P    A +       L +V+ + ED  ARM+V RAAG+I   DV+    LKN     + + YA+EL+  ++   E+L +  P +L   Y      AL R       +     W  +T    GR     G +E  +   G  E + +     R   +    ++     ++     +M TVVV AIL  + RY+ +H IKGAQWAK+KGTCREV +F AEHG WATTS++ HRE +HA  V ++ LL ++A CAAIP DNCDFDPR+G  QGEG H+  IAA+A+TV P+VGR++D   ++ R SLT++D++ G + +  +   RY  F  +L R VF  A      ++  TC E ELRK
Sbjct:  241 LVDLMLRARRSAPAQPPSNQLADKGGSLESILKEVEKDTEDADARMSVVRAAGRIVRADVESDPALKNTTGTREKYRYADELDMKVKPPRETLLSTFPPSLVGLYQSMTDMALYREIIASETEHPGEPWVWQTEGRDGRHPTTSGDLEGEN---GDGEKKNE----ARHINSLNRDRRSTHRRLL-----VMCTVVVTAIL--RGRYMGSHDIKGAQWAKSKGTCREVTNFVAEHGLWATTSQIQHREDYHARFVEDKDLLSQDAECAAIPLDNCDFDPRVGVGQGEGPHLPFIAATALTVGPDVGRMDDWWLVKGRGSLTVEDVLMGPERDRGDGARRYNEFSADLYRGVFAEARNNSDRAAADTCFECELRK 600          
BLAST of mRNA_P-littoralis_Contig859.1.1 vs. uniprot
Match: A0A6H5JUI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUI8_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 2.950e-58
Identity = 159/440 (36.14%), Postives = 219/440 (49.77%), Query Frame = 3
Query:  681 FPFRRRDS*RGLVGYVLQARTAKADPNPPTPAALRK------DVFRQELDQVDLNKEDDAARMAVCRAAGKIAHHDVQGQKVLKNAPRKEQPHNYAEELENPMRRVLESLAALPSTLSSAYSEHNKYAL------VRLDRTTRGWGQRTRLGVGRDLDRPGTIECHSRQ*GHEEPRRQQGRRC-RPCWTRPHTQKQPRETVVSSSG*--------------------MMSTVVVKAILGAQYRYLATHAIKGAQWAKAKGTCREVIDFCAEHGRWATTSRVGHRESFHATIV*EEYLLPKNATCAAIPHDNCDFDPRIGERQGEGAHISTIAASAVTVEPEVGRLEDASKLRPRRSLTLDDIITGSDAEGSEWRYQTFMMELQRAVFNSASMRLSGSSVSTCMEAELRKVISLPQRMLRCR---PVRAGKPLMPMKSTIG 1892
            FP   RD  + +    L+AR A     P TPA           + R+ L++    KE DA R  + RAA +I   DV     LKNA  + Q H Y+ EL  P++ V ++LA +P TL   +       L      +  +   RGW        G      G++       G +     +G  C R   TR  T+ +  ++   +S                      M+    VKAI     R+L    IKGAQWAK+KGTCR+VIDF A HG WATTS+V HRE + A +V ++  LPK   CAAI +DNCD DPR+GERQ EG HIS IAA+AVTV  +VGR+++A+ LR RRSL +D I  G D E  + R++ F   L+RA  +S     S  S  TC+E+ELRKV +  + M+      P   G+ L+    ++G
Sbjct:   33 FPVNARD--KAIASLALRARLANTFDGPSTPANATSGGNTSLQIVRRLLEEA---KEADA-RTEIVRAAAEIVRADVDQHPDLKNARIRRQKHKYSVELAAPVKPVRDALAEMPPTLVGLFQGMTNMPLYPEITDIGSEDPGRGWAWDEIKTDGPQPSAAGSVRREDD--GSDGADALEGAACERQAPTRDATRAEEVDSAGPTSEAAAISIEKNNQGRRGSARRLYMLCKCTVKAIFPG--RHLTAADIKGAQWAKSKGTCRQVIDFVAGHGLWATTSQVQHREDYRAKVVEDKDTLPKGDQCAAIANDNCDHDPRVGERQWEGPHISFIAATAVTVGDDVGRMQNAASLRRRRSLAVDQITKGLDQEEGDRRFKDFERTLRRAAVDSVLSSSSEDSPWTCVESELRKVTNF-REMISSNGGSPFGVGQDLLASTPSLG 461          
BLAST of mRNA_P-littoralis_Contig859.1.1 vs. uniprot
Match: A0A6H5JR31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR31_9PHAE)

HSP 1 Score: 216 bits (551), Expect = 2.490e-56
Identity = 151/400 (37.75%), Postives = 204/400 (51.00%), Query Frame = 3
Query:  714 LVGYVLQARTAK-ADPNPPTPAALRKDVFRQELDQVDLNKEDDAARMAVCRAAGKIAHHDVQGQKVLKNAPRKEQPHNYAEELENPMRRVLESLAALPSTLSSAYSEHNKYALVR--LDRTTRGW--------------------------------GQRTRLGVGRDLDRPGTIECHSRQ*GHEEPRRQQGRRCRPCWTRPHTQKQPRETVVSSSG*MMSTVVVKAILGAQYRYLATHAIKGAQWAKAKGTCREVIDFCAEHGRWATTSRVGHRESFHATIV*EEYLLPKNATCAAIPHDNCDFDPRIGERQGEGAHISTIAASAVTVEPEVGRLEDASKLRPRRSLTLDDIITGSDAEGSEWRYQTFMMELQRAVFNSASMRLSGSSVSTCMEAELRK 1808
            +VGY++QAR  +    + P  +  R  +  +EL++V ++      RMAV +AAG I   D++ Q  LKN P      N A+EL   +    E+LAALP      +       L R        GW                                GQ + LG   +   PG  E  S     E+   +     R      H +   R+ V      MM T V KA+LG +YR  A+H IK AQWAK+KGT R V+DFCA HG WAT S+V HRE F+A +V + ++LPK+ATC A P DNCD  P +G  Q E  H+STIAASAVTV   VG LED SKL+    LT+DD++ G +A+G E R++ F   L+RAV+ SAS+  +      C+EA+LRK
Sbjct:  126 VVGYLVQARKRRDLAAHEPESSEGRGPLLDRELERVKVDVAAGPERMAVVKAAGAIVRTDIEQQSSLKNVPPSRAKQNSAQELATTVESPPETLAALPPNTVGFFQRILYQPLCREVSSLAPTGWVWEAGWRDVHRRRDNGDGGVESRRADTSVVDGGQASSLGTSVEGRGPGASEGPSVHPTSEKEAAKIDDANR------HFRSVGRQLV------MMCTGVAKAVLGTRYR--ASHHIKAAQWAKSKGTPRVVVDFCAAHGMWATDSQVRHREDFNAKVVEDGHMLPKDATCGAFPFDNCDMKPVVGVSQRE-PHLSTIAASAVTVGGSVGELEDTSKLKRYSLLTVDDVMKGPNAQGGERRFKAFQSRLRRAVYESASLGSTPDGPRWCVEAQLRK 510          
BLAST of mRNA_P-littoralis_Contig859.1.1 vs. uniprot
Match: A0A6H5JM20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM20_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 1.250e-54
Identity = 158/399 (39.60%), Postives = 201/399 (50.38%), Query Frame = 3
Query:  681 FPFRRRDS*RGLVGYVLQARTAKADPNPPTPAALRK------DVFRQELDQVDLNKEDDAARMAVCRAAGKIAHHDV-QGQKVLKNAPRKEQPHNYAEELENPMRRVLESLAALPSTLSSAYSEHNKYALVRLDRTTRGWGQRTRLGVGRDLDRPGTIECHSRQ*GHEEPRRQQGRRCRPCWTRPHTQKQPRETVVSSSG*-----MMSTVVVKAILGAQYRYLATHAIKGAQWAKAKGTCREVIDFCAEHGRWATTSRVGHRESFHATIV*EEYLLPKNATCAAIPHDNCDFDPRIG----------ERQGEGAHISTIAASAVTVEPEVGRLEDASKLRPRRSLTLDDIITGSDAEGSEWRYQTFMMELQRAVFNSASMRLSGSSVSTCMEAELRKV 1811
            FP   RD    +    L+AR A     P TPA           + R+ L++    KE DA RM + RAA +I   DV Q    LKNA  + Q H Y+ EL  P + V ++LA +P TL   +               RGW    +        + G      R  G  EP R                K+P   V    G      M+    VKAI     R+L    IKGAQWAK+KGTCR+VIDF A HG WATTS V HRE +HA +V ++ +LPK A CAAI +DNCD DPR+G          ERQGEG HIS I+A+AVTV   VGR++DA+ LR RRSLT+D I  G + E  + R++ F   L+RA  +S     S  S  TC+E+ELRKV
Sbjct:  357 FPVNARDE--VIASLALRARLANTFDGPSTPANATSGGNTSLQIVRRLLEEA---KEADA-RMEIARAAAEIVRADVDQHHPDLKNARIRRQKHKYSVELAAPGKPVRDALAEMPPTLVGLFQGSEDPG--------RGWAWDEKKQTVHSQSQRGMYG--ERMMGAMEPTRL---------------KEP--PVSGKRGFARRLYMLCKCTVKAIFPG--RHLTAADIKGAQWAKSKGTCRQVIDFVAGHGLWATTSPVQHREDYHAKVVEDKDILPKGAQCAAIANDNCDHDPRVGAXXXXXXXXXERQGEGPHISFISATAVTVGDNVGRIQDAASLRRRRSLTVDQITKGLNQEEGDRRFKDFERTLRRAAVDSVLSSSSEDSPWTCVESELRKV 720          
BLAST of mRNA_P-littoralis_Contig859.1.1 vs. uniprot
Match: A0A6H5L193_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L193_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 2.150e-54
Identity = 142/373 (38.07%), Postives = 198/373 (53.08%), Query Frame = 3
Query:  756 PNPPTPAALRKDVFRQELDQVDLNKEDDAARMAVCRAAGKIAHHDVQGQKVLKNAPRKEQPHNYAEELENPMRRVLESLAALPSTLSSAYSEHNKYALVRLDRTTRGWGQRTRLGVGRDLDRPGTIECHSRQ*-GHEEPRRQQGRRC-RPCWTRPHTQKQPRETVVSSSG*--------------------MMSTVVVKAILGAQYRYLATHAIKGAQWAKAKGTCREVIDFCAEHGRWATTSRVGHRESFHATIV*EEYLLPKNATCAAIPHDNCDFDPRIGERQGEGAHISTIAASAVTVEPEVGRLEDASKLRPRRSLTLDDIITGSDAEGSEWRYQTFMMELQRAVFNSASMRLSGSSVSTCMEAELRK 1808
            P+ P  A    +   Q++ ++    ++  ARM + RAA +I    V     LKNA  + + H Y+ EL  P++ V ++LA +P TL                           +G+ RD  +P       R+  G +E    +G  C R   TR  T+ +  ++  S+S                      M+    VKAI     R+L    IKGAQWAK+KGTCR+VIDF A HG WATTS+V HRE +HA +V ++ +LPK A CAAI +DNCD DPR+GERQG+G HIS IAA+AVTV  +V R++DA+ LR RRSLT+D I  G D E  + R++ F   L+RA  +S     S  S  TC+E+E+RK
Sbjct:  366 PSTPANATSGGNTSLQKVRRLLEEAQEADARMEIVRAAAEIVRAYVDQHPDLKNARLRRKKHKYSVELAAPVKPVRDALAEMPPTL---------------------------IGLFRDGPQPSAARSVRREDDGSDEADALEGAACERQAPTRNATRAEEVDSAGSTSEAAAISIETTNQDRRGFARRLYMLCKCTVKAIFPG--RHLTAADIKGAQWAKSKGTCRQVIDFVAGHGLWATTSQVQHREDYHAKVVEDKDILPKGAQCAAIANDNCDNDPRVGERQGKGPHISFIAATAVTVGDDVVRMQDAASLRRRRSLTVDQITKGLDQEEGDRRFKDFERTLRRAAVDSVLSSSSEDSPWTCVESEIRK 709          
BLAST of mRNA_P-littoralis_Contig859.1.1 vs. uniprot
Match: A0A6H5KBR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR1_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 4.990e-46
Identity = 99/184 (53.80%), Postives = 124/184 (67.39%), Query Frame = 3
Query: 1263 MMSTVVVKAILGAQYRYLATHAIKGAQWAKAKGTCREVIDFCAEHGRWATTSRVGHRESFHATIV*EEYLLPKNATCAAIPHDNCDFDPRIGERQGEGAH-ISTIAASAVTVEPEVGRLEDASKLRPRRSLTLDDIITGSDAEGSEWRYQTFMMELQRAVFNSASMRLSGSSVSTCMEAELRKV 1811
            M+    VKA+     R L    IKGAQWAK+KGTCR+ IDF A HG WATTS+V HRE +HA +V ++ +LPK A CAAI +DNCD DPR+GERQGEG H IS IAA+AVTV  +VGR++DA+ LR RRS T+D I  G D    + R++ F   L+RA  +S     S  S   C+E+ELRKV
Sbjct:  515 MLCKCTVKAVFPG--RDLTAADIKGAQWAKSKGTCRQDIDFVAGHGWWATTSQVQHREDYHANVVEDKDILPKGAQCAAIANDNCDHDPRVGERQGEGPHNISFIAATAVTVGYDVGRMQDAASLRRRRSHTVDQITKGLDQAEGDRRFKDFERTLRRAAVDSVLSSSSEDSPWACVESELRKV 696          
BLAST of mRNA_P-littoralis_Contig859.1.1 vs. uniprot
Match: A0A6H5JHN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHN2_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 6.600e-46
Identity = 98/200 (49.00%), Postives = 132/200 (66.00%), Query Frame = 3
Query: 1314 LATHAIKGAQWAKAKGTCREVIDFCAEHGRWATTSRVGHRESFHATIV*EEYLLPKNATCAAIPHDNCDFDPRIGERQGEGAHISTIAASAVTVEPEVGRLEDASKLRPRRSLTLDDIITGS--DAEGSEWRYQTFMMELQRAVFNSASMRLSGSSVSTCMEAELRKVISL----PQRMLRCRPVRAG--KPLMPMKSTI 1889
            +A+H IKGAQ AK+KGTCREVI+F AEHG WATTS++ HRE FHA  V ++ L  ++A CAAIP DNCDFDPR+   QGEG H+  IAA+A+TV P+VG ++D S ++ R S+T++D++ G   D E    RY  F+++L R+V   A      S   TCME+EL K I+L    PQ+ LR   ++ G  K    MK+ I
Sbjct:    1 MASHDIKGAQRAKSKGTCREVINFVAEHGLWATTSKIQHREDFHARFVDDKDLQSQDAECAAIPLDNCDFDPRVVVGQGEGPHLPFIAATALTVGPDVGGMDDCSLVKSRGSITVEDVMMGPEPDREDGARRYNGFLVKLYRSVVAEARNNSERSGPDTCMESELIKAITLEGKSPQQ-LRYAFIQKGSTKSFSDMKAAI 199          
BLAST of mRNA_P-littoralis_Contig859.1.1 vs. uniprot
Match: A0A6H5L8Z0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Z0_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.740e-45
Identity = 122/306 (39.87%), Postives = 165/306 (53.92%), Query Frame = 3
Query:  714 LVGYVLQARTAKADPNPPTPAALRKDVFRQELDQVDLNKEDDAARMAVCRAAGKIAHHDVQGQKVLKNAPRKEQPHNYAEELENPMRRVLESL-AALPSTLSSAYSEHNKYALVR------LDRTTRGWGQRTRLGVGRDLDRPGTIECHSRQ*GHEEPRRQQGRRCRPCWTRPHTQKQPRETVVSSSG*MMSTVVVKAILGAQYRYLATHAIKGAQWAKAKGTCREVIDFCAEHGRWATTSRVGHRESFHATIV*EEYLLPKNATCAAIPHDNCDFDPRIGERQGEGAHISTIAASAVTVEPEVG 1610
             V  +L+AR       P    A +    +  L +V+ N ED  ARM+V RAAG I   DV+    LKN P   + H YA+EL+  ++   E+L  A P  L   Y      AL R       +     W  +T    GR     G +E      G  E + +     R   +    ++     ++     +M TVVVKAIL  + R++ +H IKGAQWAK+KGTCR+VI+F AE+G WATTS++ HRE FHA  V ++ LL ++A CAAIP DNCDFDPR+G  QGEG H+  IAA A+TV P+VG
Sbjct:  503 FVDLMLRARRNAPVQPPSNQLADKGGSLKSILREVEKNTEDADARMSVVRAAGTIVRADVESDPALKNTPGTREKHRYADELDMKVKPPRETLLTAFPPALVGLYQSMTNMALYREIIASETEYPGEAWVWQTEGRDGRHPTTSGDLEGED---GDGEKKDE----ARHIDSLNRDRRSTHRRLL-----LMCTVVVKAIL--RGRHMGSHDIKGAQWAKSKGTCRDVINFVAEYGLWATTSQIQHREDFHARFVEDKDLLSRDAECAAIPLDNCDFDPRVGVGQGEGPHLPFIAAMALTVGPDVG 794          
BLAST of mRNA_P-littoralis_Contig859.1.1 vs. uniprot
Match: A0A6H5JUC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC7_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 3.610e-45
Identity = 146/435 (33.56%), Postives = 196/435 (45.06%), Query Frame = 3
Query:  681 FPFRRRDS*RGLVGYVLQARTAKADPNPPTPAALRK------DVFRQELDQVDLNKEDDAARMAVCRAAGKIAHHDVQGQKVLKNAPRKEQPHNYAEELENPMRRVLESLAALPSTLSSAYSEHNKYALVRLDRTTRGWGQRTRLGVGRD-LDRPGTIECHSRQ*GHEEPRRQQ----GRRCRPCWTRPHTQKQPRETVVSSSG*MMSTVVVKAILGAQYRYLATHAIKGAQWAKAKGTCREVIDFCAEHGRWATTSRVGHRESFHATIV*EEYLLPKNATCAAIPHDN----------------------------------------------------CDFDPRIGERQGEGAHISTIAASAVTVEPEVGRLEDASKLRPRRSLTLDDIITGSDAEGSEWRYQTFMMELQRAVFNSASMRLSGSSVSTCMEA 1796
            FP   RD    +    L+AR A     P TPA           + R+ L++    KE DA RM + RAA +I   DV     LKNA  + Q H Y+ EL  P++ V ++LA +P TL   + +  + +           G   R   G D  D      C  +    +  R ++    G              Q R         M+    VKAI     R+L    IKGAQWAK+KG CR+VIDF A HG WATTS+V HRE +HA +V ++ +LPK A CAAI +DN                                                    CD DPR+GERQGEG H+  IAA+AVTV  +VGR++DA+ LR R SLT+D I  G D E  + R++ F   L+RA  ++     S  S  TC+E+
Sbjct:  357 FPVNARDE--VIASLALRARLANTFDGPSTPANATSGGNTSLQIVRRLLEEA---KEADA-RMEIVRAAAEIVRADVDQHPDLKNARIRRQKHKYSVELAAPVKPVRDALAEMPPTLVGLFQDGPQPSAA---------GSVRREDDGSDGADALEGAACERQAPTRDATRAEEVDSSGATSEAAVISIEKTNQDRRGFARRLY-MLCKCTVKAIFPG--RHLTAADIKGAQWAKSKGNCRQVIDFLAGHGLWATTSQVQHREDYHAKVVEDKDILPKGAQCAAIANDNTTCGSVIDFLAGHGLWATTSQVQHREDYHAKVVEDKDIFPKGAQCAAIANHNCDHDPRVGERQGEGPHVLFIAATAVTVGDDVGRMQDAASLRRRTSLTVDQITKGLDQEEGDRRFKDFERTLRRAAVDNVLSSSSEDSPWTCVES 773          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig859.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5L6D9_9PHAE1.710e-5939.42Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSG4_9PHAE3.560e-5937.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUI8_9PHAE2.950e-5836.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR31_9PHAE2.490e-5637.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JM20_9PHAE1.250e-5439.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L193_9PHAE2.150e-5438.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBR1_9PHAE4.990e-4653.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHN2_9PHAE6.600e-4649.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8Z0_9PHAE1.740e-4539.87Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUC7_9PHAE3.610e-4533.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig859contigP-littoralis_Contig859:492..3252 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2244
Hectar predicted targeting categoryother localisation
Exons3
Cds size549
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791727.5615315-UTR-P-littoralis_Contig859:491..9271680791727.5615315-UTR-P-littoralis_Contig859:491..927Pylaiella littoralis U1_48UTRP-littoralis_Contig859 492..927 -
1680791727.5732822-UTR-P-littoralis_Contig859:1345..19461680791727.5732822-UTR-P-littoralis_Contig859:1345..1946Pylaiella littoralis U1_48UTRP-littoralis_Contig859 1346..1946 -
1680791727.5842419-UTR-P-littoralis_Contig859:2045..25351680791727.5842419-UTR-P-littoralis_Contig859:2045..2535Pylaiella littoralis U1_48UTRP-littoralis_Contig859 2046..2535 -
1680791727.6092317-UTR-P-littoralis_Contig859:3084..32521680791727.6092317-UTR-P-littoralis_Contig859:3084..3252Pylaiella littoralis U1_48UTRP-littoralis_Contig859 3085..3252 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791727.5995724-CDS-P-littoralis_Contig859:2535..30841680791727.5995724-CDS-P-littoralis_Contig859:2535..3084Pylaiella littoralis U1_48CDSP-littoralis_Contig859 2536..3084 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig859.1.1prot_P-littoralis_Contig859.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig859 2536..3084 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig859.1.1

>prot_P-littoralis_Contig859.1.1 ID=prot_P-littoralis_Contig859.1.1|Name=mRNA_P-littoralis_Contig859.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=183bp
MVGVEKSKATRVCHDCGGAYSGKKTKWYEMGPEDGSGKDGGAARPPRGWR
CSSCYQQRRGSGNEKTKCQSPPFNMPDIVVPESRAEIAEVRVRLRVEEAV
GRGEIVFSDDVAEWLVQDRSQDRRRDCASEYIRRLTKKIFNAVANTPGSK
SRVVDLGRGLSEGGDARRKPLFLFADEIRDEV*
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mRNA from alignment at P-littoralis_Contig859:492..3252-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig859.1.1 ID=mRNA_P-littoralis_Contig859.1.1|Name=mRNA_P-littoralis_Contig859.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2761bp|location=Sequence derived from alignment at P-littoralis_Contig859:492..3252- (Pylaiella littoralis U1_48)
CCGGAAACCCAGGCCTTCAAGCATCTCCGCCACGACCGGCTTCGGCGAGC TACCTAATTAGTGGTCGAGTTGCGACTTACCGGCGGTGAGCTTCCTGATG CTCTGGTGAACGATTTTTGTCCCAGTAACTCCTGCCTTTGCCCACCAGCA GACTGCTTCCATACCTTCATGGTTGGTGTGGAAAAATCGAAAGCAACACG TGTATGTCATGACTGCGGTGGAGCATATTCGGGGAAGAAGACAAAGTGGT ACGAAATGGGTCCGGAAGACGGTAGCGGCAAGGACGGGGGTGCAGCCAGG CCCCCACGTGGTTGGCGATGTAGCTCCTGCTACCAACAGCGGAGAGGCAG TGGAAATGAGAAGACGAAATGCCAATCCCCACCGTTCAACATGCCCGACA TTGTGGTCCCGGAATCGCGGGCTGAAATAGCAGAGGTCAGGGTGCGCTTG AGGGTGGAAGAAGCTGTCGGTCGCGGGGAGATTGTTTTCTCGGACGACGT GGCGGAGTGGTTGGTACAGGATCGCTCACAGGACCGCAGGAGAGATTGTG CATCAGAGTACATACGACGATTGACGAAAAAGATTTTCAACGCCGTTGCC AACACTCCAGGGAGCAAGTCGCGTGTTGTCGATCTAGGAAGAGGGTTGTC TGAAGGGGGAGATGCACGCCGGAAGCCGCTTTTCCTTTTCGCAGACGAGA TTCGTGACGAGGTCTAGTTGGCTACGTCCTTCAAGCTCGTACGGCGAAGG CGGACCCCAACCCACCCACCCCGGCAGCATTACGAAAGGATGTTTTCAGG CAAGAGCTGGACCAGGTGGACTTGAACAAAGAGGACGACGCCGCAAGGAT GGCGGTGTGTCGGGCAGCAGGAAAGATTGCTCACCACGATGTCCAGGGGC AAAAAGTTCTGAAGAATGCCCCGCGGAAGGAACAACCGCACAACTATGCG GAGGAGTTGGAAAACCCTATGCGGCGTGTTCTTGAGTCCCTAGCCGCGCT GCCCTCGACGCTAAGTAGTGCTTATTCAGAGCACAATAAATATGCCCTTG TACGGCTTGATCGCACGACCCGAGGATGGGGACAACGGACCAGGTTGGGT GTGGGAAGAGACTTGGACAGACCGGGTACCATCGAGTGCCACTCTAGACA ATGAGGTCATGAGGAACCACGCAGGCAGCAGGGACGTCGGTGTCGTCCAT GCTGGACAAGATGTCGATAGAGGGCAACACACCCCTGCTGAGGTCAACCC AGGAGGTGGTGGTCGAGCAGGGGCGCTGTCCGAAGGATCGATCTCCGATG TGCAAGCCGACCGCATACACAAAAACAACCGCGAGAGACGGTCGTTTCAT CGTCGGGTTGAATGATGAGCACGGTCGTGGTGAAAGCCATTTTGGGCGCC CAGTACCGGTATTTGGCTACTCACGCTATCAAAGGGGCTCAATGGGCGAA GGCCAAGGGTACTTGTCGCGAAGTTATCGACTTTTGCGCCGAGCACGGTC GATGGGCGACGACTTCCCGAGTGGGCCATCGAGAAAGTTTCCACGCGACA ATCGTATAAGAGGAATACCTCCTTCCCAAGAATGCGACCTGCGCGGCCAT CCCCCACGACAACTGTGACTTTGACCCAAGAATCGGAGAACGTCAAGGGG AGGGGGCTCACATATCGACAATAGCGGCATCAGCCGTGACGGTGGAGCCC GAGGTGGGTAGGCTCGAAGACGCTTCTAAGCTGAGGCCCCGAAGGTCGCT GACGCTGGACGACATCATTACGGGATCGGACGCGGAGGGGAGTGAGTGGC GGTACCAGACGTTTATGATGGAACTCCAGCGCGCCGTCTTCAACAGTGCG TCTATGAGGTTAAGCGGATCAAGTGTGTCTACATGCATGGAGGCTGAACT CCGAAAGGTGAAATGTTCTTCGAATAGTGCTAAAATACATTTCCATGTAT GTTCGCTGTGTTTTGACTCCGACGGCATCTTGACTCAGAGATCGGACAAC TCCCATGATGGCAACGGAGGTTCAGATGGGTTATCGGACGGGTCGTCTGA GGAAATATTTAGTTTGAAGTGGGGTGACGGACACGGCAACGACGGTGATA TTATGGACGGCGAGCCGGCGATTTGGGACTAAAACTGAGGGGGCGTATGT TTTTTTCCATTAAGGTATGAATTTCTTGTTAATACAGGGCACCACGACAG TGCATGATGTTGCCCCCTTCTCTTCACCTACCGATACCAAACCCAACGAC TATTTTACTACTCTCTATGCCGTTTATTTAATGTCAGGTCGCTTCATTTT CGGCCCATTTTTGACAAATCGACAGGTTATTTCCCTCCCACAGCGGATGC TACGTTGTCGTCCGGTGCGTGCTGGAAAACCGCTTATGCCGATGAAGAGC ACGATTGGAGAACAGCAGTATTGCTGATGGGCTGCTGATGAGTTTGTAAA CCGAGCTCTTCGAAATAGCTTGGAGTGGGCATATGTTAGGGAAGCCCGGC GTTGCGTTTCATACGGGGATGGCAACAAGGAGGGGACAGAGGGGCAGGAG GTCGCGGACAGGTCCTGCGAAGTTCAGCTGGCTTGTGTAAATAGACGTCA ATTTTGATCACTACATTTGTATATCACGTTAAAGTGATGCTCCACTTATG GTTTTGAGTGGTACCCGACAAGCTAGTGGATTATTTTCAGCATCCGCCCC CAGTTCCTGCTGCCGTGTTTGTCGGCATTATCATGTGCAAAAAAAGTGTA TAAAAGTTGCA
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Coding sequence (CDS) from alignment at P-littoralis_Contig859:492..3252-

>mRNA_P-littoralis_Contig859.1.1 ID=mRNA_P-littoralis_Contig859.1.1|Name=mRNA_P-littoralis_Contig859.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=549bp|location=Sequence derived from alignment at P-littoralis_Contig859:492..3252- (Pylaiella littoralis U1_48)
ATGGTTGGTGTGGAAAAATCGAAAGCAACACGTGTATGTCATGACTGCGG
TGGAGCATATTCGGGGAAGAAGACAAAGTGGTACGAAATGGGTCCGGAAG
ACGGTAGCGGCAAGGACGGGGGTGCAGCCAGGCCCCCACGTGGTTGGCGA
TGTAGCTCCTGCTACCAACAGCGGAGAGGCAGTGGAAATGAGAAGACGAA
ATGCCAATCCCCACCGTTCAACATGCCCGACATTGTGGTCCCGGAATCGC
GGGCTGAAATAGCAGAGGTCAGGGTGCGCTTGAGGGTGGAAGAAGCTGTC
GGTCGCGGGGAGATTGTTTTCTCGGACGACGTGGCGGAGTGGTTGGTACA
GGATCGCTCACAGGACCGCAGGAGAGATTGTGCATCAGAGTACATACGAC
GATTGACGAAAAAGATTTTCAACGCCGTTGCCAACACTCCAGGGAGCAAG
TCGCGTGTTGTCGATCTAGGAAGAGGGTTGTCTGAAGGGGGAGATGCACG
CCGGAAGCCGCTTTTCCTTTTCGCAGACGAGATTCGTGACGAGGTCTAG
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