mRNA_P-littoralis_Contig858.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig858.1.1 vs. uniprot
Match: D7G8A4_ECTSI (Coiled-coil domain-containing protein 153 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A4_ECTSI) HSP 1 Score: 155 bits (392), Expect = 1.300e-44 Identity = 156/212 (73.58%), Postives = 156/212 (73.58%), Query Frame = 1
Query: 1 MGPKKKKGDKKGKT-EAAEDGAPLSDADKANMFQAALQSLQIQLAGRTDETSRALEQKREMVDQIQEMQRKVKNEQIGTLDITRDMTRQYKGMQEELLNRINQLEGTIQAPYLLALSRQALQDELERSRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEVNSTGFDADDSIPLQRRLEEVSLATLSEAPHK 633
MGPKKKKGDKKGK EAAEDGAPLSDADKANMFQAALQSLQIQL GTLDITRDMTRQYKGMQEELLNRINQLEGTIQA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEVNSTGFDADDSIPLQRRLEEVSLATLSEAPHK
Sbjct: 1 MGPKKKKGDKKGKAGEAAEDGAPLSDADKANMFQAALQSLQIQL---------------------------------GTLDITRDMTRQYKGMQEELLNRINQLEGTIQAXXXXXXXX----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEVNSTGFDADDSIPLQRRLEEVSLATLSEAPHK 169
BLAST of mRNA_P-littoralis_Contig858.1.1 vs. uniprot
Match: A0A6H5JWH7_9PHAE (Coiled-coil domain-containing protein 153 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH7_9PHAE) HSP 1 Score: 133 bits (334), Expect = 3.250e-36 Identity = 131/152 (86.18%), Postives = 132/152 (86.84%), Query Frame = 1
Query: 178 MVDQIQEMQRKVKNEQIGTLDITRDMTRQYKGMQEELLNRINQLEGTIQAPYLLALSRQALQDELERSRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEVNSTGFDADDSIPLQRRLEEVSLATLSEAPHK 633
MV+QIQEMQRKVKNEQIGTLDITRDMTRQYKGMQEELLNRINQLEGTIQA L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEVNSTGFDADDSIPLQRRLEEVSLATLSEAPHK
Sbjct: 1 MVEQIQEMQRKVKNEQIGTLDITRDMTRQYKGMQEELLNRINQLEGTIQA----------LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEVNSTGFDADDSIPLQRRLEEVSLATLSEAPHK 142
BLAST of mRNA_P-littoralis_Contig858.1.1 vs. uniprot
Match: A0A0P1B8A1_PLAHL (Coiled-coil domain-containing protein 153 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B8A1_PLAHL) HSP 1 Score: 102 bits (255), Expect = 1.020e-23 Identity = 75/205 (36.59%), Postives = 107/205 (52.20%), Query Frame = 1
Query: 1 MGPKKKKGDKKGKTEAAEDGAPLSDADKANMFQAALQSLQIQLAGRTDETSRALEQKREMVDQIQEMQRKVKNEQIGTLDITRDMTRQYKGMQEELLNRINQLEGTIQAPYLLALSRQALQDELERSRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEVNSTGFDADD-SIPLQRRLEEVSLAT 612
MGPK++ KK K E E+G LS +KA +FQ+A +SLQ+QLA R + T + LE KRE+ DQ+ E+Q+ +NE+ T IT+DMTRQYK MQEELLNR+N LE + L+D+LE +R+ RIE+ +T F+++ ++P+ RRLEE +L T
Sbjct: 1 MGPKRQIKGKKAK-EKKENGGVLSAEEKARLFQSANRSLQMQLAERQEITVKTLESKRELQDQVTELQKSFENERKDTFGITQDMTRQYKSMQEELLNRVNTLEN----------ANTELRDQLELARVNFQEMKHESNRLIAAKNIEIQELKVKMEEMAQEFGDMLKETLEKMRERIEITNTSFESEGGAVPMMRRLEEFNLGT 194
BLAST of mRNA_P-littoralis_Contig858.1.1 vs. uniprot
Match: A0A8K1C3J3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3J3_PYTOL) HSP 1 Score: 102 bits (253), Expect = 1.920e-23 Identity = 74/206 (35.92%), Postives = 105/206 (50.97%), Query Frame = 1
Query: 1 MGPKKKKGDKKGKT---EAAEDGAPLSDADKANMFQAALQSLQIQLAGRTDETSRALEQKREMVDQIQEMQRKVKNEQIGTLDITRDMTRQYKGMQEELLNRINQLEGTIQAPYLLALSRQALQDELERSRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEVNSTGFDADDSIPLQRRLEEVSLA 609
M PKK K KKGK + AE+G LS ++A +F +A +SLQ+QLA R ++T RA+E KRE+ D++ +QR + E+ T IT+DMTRQYK MQEELLNR+N LE + L+D+LE +R+ RIE+ +T F+ D +P+ RRL+E +LA
Sbjct: 1 MPPKKDKKPKKGKDKKDDGAENGGVLSPEEQAKLFLSANRSLQMQLAERHEQTVRAMESKRELQDRVSSLQRAFERERAETFGITQDMTRQYKSMQEELLNRVNTLEN----------ANTELRDQLELARVNFEEMKREKDRVIAAKNTEIQELKAKMEEMALEFGDMLKETLEKMRERIEITNTSFEHDGGMPMIRRLDEFNLA 196
BLAST of mRNA_P-littoralis_Contig858.1.1 vs. uniprot
Match: H3HE88_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HE88_PHYRM) HSP 1 Score: 100 bits (249), Expect = 5.040e-21 Identity = 75/210 (35.71%), Postives = 109/210 (51.90%), Query Frame = 1
Query: 1 MGPKKKKGDKKGKT---EAAEDGAPLSDADKANMFQAALQSLQIQLAGRTDETSRALEQKREMVDQIQEMQRKVKNEQIGTLDITRDMTRQYKGMQEELLNRINQLEGTIQAPYLLALSRQALQDELERSRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEVNSTGFDADD-SIPLQRRLEEVSLATLS 618
MGPKK+K KK K + AE+G LS ++A +FQ+A +SLQ+QLA R + T + LE KRE+ +++ ++Q+ + E+ T IT+DMTRQYK MQEELLNR+N LE T L+D+LE +R+ RIE+ +T F+ D S+P+ RRLE+ +L+ LS
Sbjct: 1 MGPKKEKKGKKAKEKKDDGAENGGVLSPEEQAKLFQSANRSLQMQLAERHEITVKTLESKRELQERVADLQKDFEQERKETFGITQDMTRQYKSMQEELLNRVNTLENT----------NTELRDQLELARVNFEAMKHDKDRVIAAKNLEVQELKAKMEEMAQEFGDMLKETLDKMRERIEITNTSFENDGGSLPMMRRLEDCALSHLS 200
BLAST of mRNA_P-littoralis_Contig858.1.1 vs. uniprot
Match: A0A5D6Y4N4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4N4_9STRA) HSP 1 Score: 100 bits (248), Expect = 9.420e-21 Identity = 69/204 (33.82%), Postives = 103/204 (50.49%), Query Frame = 1
Query: 1 MGPKKKKGDKKGKTEAAEDGAPLSDADKANMFQAALQSLQIQLAGRTDETSRALEQKREMVDQIQEMQRKVKNEQIGTLDITRDMTRQYKGMQEELLNRINQLEGTIQAPYLLALSRQALQDELERSRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEVNSTGFDADDSIPLQRRLEEVSLAT 612
MGPKK K K+ K + AE+G L+ ++A +F +A +SLQ+QLA R + +A+E KRE+ +++ ++QR + E++ T IT+DMTRQYK MQEELLNR+N LE + L+D+LE R+ RIE+ +T F+ D P+ RRLEE +L +
Sbjct: 870 MGPKKGKKPKEKKDDGAENGGVLTPEEQAKLFLSANRSLQMQLAERHELAVKAIESKRELQERVSDLQRDFERERVETFGITQDMTRQYKSMQEELLNRVNSLEN----------ANTELRDQLELGRVNFEEMKREKDRVIASKNVEIHELKAKMEEMAQEFGDMLKETLDKMRERIEITNTSFEGDGGTPMIRRLEEFNLGS 1063
BLAST of mRNA_P-littoralis_Contig858.1.1 vs. uniprot
Match: A0A024UDG1_9STRA (Coiled-coil domain-containing protein 153 n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024UDG1_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.580e-20 Identity = 102/206 (49.51%), Postives = 133/206 (64.56%), Query Frame = 1
Query: 1 MGPKK--KKG-DKKGKTEAAEDGAPLSDADKANMFQAALQSLQIQLAGRTDETSRALEQKREMVDQIQEMQRKVKNEQIGTLDITRDMTRQYKGMQEELLNRINQLEGTIQAPYLLALSRQALQDELERSRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEVNSTGFDADDSIPLQRRLEEVSLA 609
MGPKK KKG DKKG E+ ++G L+ D+ M +SLQ+QLA R + +A+E K+E+ ++ E+QR ++ + TL IT+DMTRQYK MQEELLNRIN LE T L+D+LE +R+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIE+++T +D + P+ RRLEE +L+
Sbjct: 1 MGPKKDKKKGKDKKGADESTDNGGVLTPEDQVKMLGCVNRSLQLQLADRHEMAVKAMEAKKELQGRVLELQRDFESGKTQTLGITQDMTRQYKSMQEELLNRINTLENT----------NTELRDQLELARVHLEEVKREKDSVIGGKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEISNTSYDNESGQPMMRRLEEFNLS 196
BLAST of mRNA_P-littoralis_Contig858.1.1 vs. uniprot
Match: A0A7S0XCP2_9STRA (Coiled-coil domain-containing protein 153 (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCP2_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.920e-20 Identity = 57/110 (51.82%), Postives = 75/110 (68.18%), Query Frame = 1
Query: 1 MGPKKK--KGDKKGKTEAAEDGAPLSDADKANMFQAALQSLQIQLAGRTDETSRALEQKREMVDQIQEMQRKVKNEQIGTLDITRDMTRQYKGMQEELLNRINQLEGTIQ 324
MGPK K KGK E+G PL D+AN ++ A QSLQ+QLA RT+E S+A+ KRE+ +++ + + + E+ TLDITRDMTRQYK M+EELL RIN LE T+Q
Sbjct: 1 MGPKPNTAKPKSKGKDAKPENGGPLDPKDEANFYRLAYQSLQLQLAERTEEASKAVASKRELQARVEHISKDFEEEKKLTLDITRDMTRQYKSMREELLGRINDLEETVQ 110
BLAST of mRNA_P-littoralis_Contig858.1.1 vs. uniprot
Match: W2KM78_PHYPR (Coiled-coil domain-containing protein 153 n=12 Tax=Peronosporaceae TaxID=4777 RepID=W2KM78_PHYPR) HSP 1 Score: 94.0 bits (232), Expect = 2.780e-20 Identity = 71/208 (34.13%), Postives = 106/208 (50.96%), Query Frame = 1
Query: 1 MGPKKKK---GDKKGKTEAAEDGAPLSDADKANMFQAALQSLQIQLAGRTDETSRALEQKREMVDQIQEMQRKVKNEQIGTLDITRDMTRQYKGMQEELLNRINQLEGTIQAPYLLALSRQALQDELERSRLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIEVNSTGFDADD-SIPLQRRLEEVSLAT 612
MGPKK+K K + AE+G L+ ++A +FQ+A +SLQ+QLA R + T + LE KRE+ +++ ++Q+ + E+ T IT+DMTRQYK MQEELLNR+N LE T L+D+LE +R+ RIE+ +T F++D S+P+ RRLEE +L +
Sbjct: 1 MGPKKEKKAXXXXXKKDDGAENGGVLTAEEQAKLFQSANRSLQMQLAERHEITVKTLESKRELQERVADLQKDFERERKETFGITQDMTRQYKSMQEELLNRVNTLENT----------NTELRDQLELARVNFEEMKHEKDRIIAAKNLEIQELKAKMEEMAQEFGDMLKETLDKMRERIEITNTSFESDGGSLPMMRRLEEFNLGS 198
BLAST of mRNA_P-littoralis_Contig858.1.1 vs. uniprot
Match: A0A7S3HPV7_9STRA (Coiled-coil domain-containing protein 153 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPV7_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 3.180e-20 Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 1 MGPKKKKGDKKGKTEAAEDGAPLSDADKANMFQAALQSLQIQLAGRTDETSRALEQKREMVDQIQEMQRKVKNEQIGTLDITRDMTRQYKGMQEELLNRINQLEGTIQ 324
MGPKK KK K E+G L+ +KA +F QSLQ+QL+ R++E S+AL KRE +I+++QR + EQ T +IT+DMTRQYKGMQEELL RIN+LE TIQ
Sbjct: 1 MGPKKAPAGKK-KEGNPENGGELTAEEKAKLFMLTCQSLQVQLSERSEEASKALAAKREYKSRIEQIQRDFEEEQKQTFEITQDMTRQYKGMQEELLTRINKLEDTIQ 107 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig858.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig858.1.1 >prot_P-littoralis_Contig858.1.1 ID=prot_P-littoralis_Contig858.1.1|Name=mRNA_P-littoralis_Contig858.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=212bp MGPKKKKGDKKGKTEAAEDGAPLSDADKANMFQAALQSLQIQLAGRTDETback to top mRNA from alignment at P-littoralis_Contig858:505..4114+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig858.1.1 ID=mRNA_P-littoralis_Contig858.1.1|Name=mRNA_P-littoralis_Contig858.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3610bp|location=Sequence derived from alignment at P-littoralis_Contig858:505..4114+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig858:505..4114+ >mRNA_P-littoralis_Contig858.1.1 ID=mRNA_P-littoralis_Contig858.1.1|Name=mRNA_P-littoralis_Contig858.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=636bp|location=Sequence derived from alignment at P-littoralis_Contig858:505..4114+ (Pylaiella littoralis U1_48)back to top |