mRNA_P-littoralis_Contig120.6.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig120.6.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 112 bits (281), Expect = 2.030e-26 Identity = 64/161 (39.75%), Postives = 90/161 (55.90%), Query Frame = 1
Query: 1 LIEDGTFAQNFRMSPSPFEKLYGILRPRLYLANRSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYVLVGAALDAINDCRRLRVRWPRTAEERWKVAAGFRERSPNFIIRRCLGAVDGVTIKMKKRGKKEHVCPDRFFFGQKKCVGLNMQ 483
++ED TF + FRM + F L ILRP+L + G RNG I L LR+LAGGS+ EV ++S AY +V +DAIN R+L +WP ++ A +R RS N +IRRC+GA+DG+ +++ K H P F+ G KK G+N Q
Sbjct: 64 MVEDNTFRKRFRMDYTDFMTLADILRPKLQ-RDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWP-YGDDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQ 222
BLAST of mRNA_P-littoralis_Contig120.6.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 111 bits (277), Expect = 6.990e-26 Identity = 65/161 (40.37%), Postives = 88/161 (54.66%), Query Frame = 1
Query: 1 LIEDGTFAQNFRMSPSPFEKLYGILRPRLYLANRSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYVLVGAALDAINDCRRLRVRWPRTAEERWKVAAGFRERSPNFIIRRCLGAVDGVTIKMKKRGKKEHVCPDRFFFGQKKCVGLNMQ 483
+++DGTF FRM + F L +LRP+L N G RNG I L LR+LAGGS+ EV +RS AY +V +DAIN R L WP E+ +R RS N +IR C+GA+DG+ ++M + + HV P F+ G KK G+N Q
Sbjct: 60 MVQDGTFRLRFRMDYTEFALLADMLRPKLE-RNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPE-GEDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQ 218
BLAST of mRNA_P-littoralis_Contig120.6.1 vs. uniprot
Match: A0A6H5J5V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V5_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 2.310e-23 Identity = 59/151 (39.07%), Postives = 78/151 (51.66%), Query Frame = 1
Query: 37 MSPSPFEKLYGILRPRLYLANRSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYVLVGAALDAINDCRRLRVRWPRTAEERWKVAAGFRERSPNF--IIRRCLGAVDGVTIKMKKRGKKEHVCPDRFFFGQKKCVGLNMQ 483
MSP F+ LY +LR RL + G NG I AL LRWLAG + + S A+ + LDAIND RLR++WPR E A F R +++RC+GA++G+ ++ KK EH P RFF G K VG+N Q
Sbjct: 1 MSPKEFKGLYEMLRGRLE-CHGPEGRGHNGTIAGEWALASTLRWLAGHGVSAAADGPHMATSTAFAKIKKGLDAINDYGRLRIKWPRKERELQAKAQRFAARRSQLDPVLKRCVGALNGLLVRRKKPSITEHPYPHRFFSGHKMTVGMNYQ 150
BLAST of mRNA_P-littoralis_Contig120.6.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 9.980e-21 Identity = 57/162 (35.19%), Postives = 86/162 (53.09%), Query Frame = 1
Query: 1 LIEDGTFAQNFRMSPSPFEKLYGILRPRLYLANRSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYVLVGAALDAINDCRRLRVRWPRTAEERWKVAAGFRERSPNFIIRRCLGAVDGVTIKMKKRGKKEHVCPDRFFFGQKKCVGLNMQV 486
+++D TF+ FRM F L LRP L N G+ RNG I + LRWLAGGSI+E +RS AY + ++A+N C L +WP E+ + + + ++R+C+GA+DG+ ++M K KE P+ ++ G KK G+N QV
Sbjct: 64 MLQDHTFSMRFRMEYDDFRVLVDHLRPALQ-QNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPE-GEDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQV 223
BLAST of mRNA_P-littoralis_Contig120.6.1 vs. uniprot
Match: A0A6A3MSZ9_9STRA (DDE Tnp4 domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3MSZ9_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.030e-19 Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = 1
Query: 1 LIEDGTFAQNFRMSPSPFEKLYGILRPRLYLANR-SRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYVLVGAALDAINDCRRLRVRWPRTAEERWKVAAGFRERSPNFIIRRCLGAVDGVTIKMKKRGKKEHVCPDRFFFGQKKCVGLNMQV 486
L+++G F + ++MS S F L L P L + + SR T P + CLRWL+GGS H+VR + G S SA Y + +DAI L++++P + + + +VA F + S + +++ C+GAVDG ++ KKE FF G + G+N+QV
Sbjct: 44 LVDEGLFHKCYKMSCSSFMALAAKLEPYLPVDEKQSRNRTGIEPATHVYKIQMCLRWLSGGSYHDVREISGVSVSAFYTSIHEVVDAITAHAELQLQFPTSVQAQRRVAKAFEQLSNSHVMKGCVGAVDGWLCPIRVPQKKEVSRVRSFFCGHYQRYGVNVQV 206
BLAST of mRNA_P-littoralis_Contig120.6.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 5.640e-19 Identity = 53/138 (38.41%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 73 LRPRLYLANRSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYVLVGAALDAINDCRRLRVRWPRTAEERWKVAAGFRERSPNFIIRRCLGAVDGVTIKMKKRGKKEHVCPDRFFFGQKKCVGLNMQV 486
LRP L N+ G+ RNG I + LRWLAGGSI+E +RS AY + ++A+N C L +WP E+ + A FR RS ++R+C+GA DG+ ++M K KE P+ ++ G KK G+N Q
Sbjct: 77 LRPALQ-KNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPE-GEDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQA 212
BLAST of mRNA_P-littoralis_Contig120.6.1 vs. uniprot
Match: A0A6H5KD49_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD49_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 8.750e-19 Identity = 48/126 (38.10%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 109 GMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYVLVGAALDAINDCRRLRVRWPRTAEERWKVAAGFRERSPNFIIRRCLGAVDGVTIKMKKRGKKEHVCPDRFFFGQKKCVGLNMQV 486
G+ RNG I + LRWLAGGSI+E +RS AY + ++A+N C L +WP E+ + A FR RS ++R+C+GA+D + ++M K KE P+ ++ G KK G+N QV
Sbjct: 2 GLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPE-GEDAARAAELFRNRSSMDVVRKCVGAMDVLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQV 126
BLAST of mRNA_P-littoralis_Contig120.6.1 vs. uniprot
Match: A0A6A3QK27_9STRA (DDE Tnp4 domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3QK27_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.190e-17 Identity = 53/164 (32.32%), Postives = 87/164 (53.05%), Query Frame = 1
Query: 1 LIEDGTFAQNFRMSPSPFEKLYGILRPRLYLANRSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYVLVGAALDAINDCRRLRVRWPRTAEERWKVAAGFRERSPNFIIRRCLGAVDG--VTIKMKKRGKKEHVCPDRFFFGQKKCVGLNMQV 486
L+ + F +RM + F +L +L P L+ + + + G I AL LR+ AGGS+H++RRV G S+++ Y ++ +DAIN LR+ +PR+ R AA F+ S + C+G VDG I+ + + V P R++ G +C G+N+Q
Sbjct: 40 LLAESQFEACYRMPAAAFVQLEDLLAPTLHRSPHA--WVQRGYISVDNALQLTLRYFAGGSMHDIRRVAGVSKASFYRILWLVVDAINAVSELRLVFPRSPTAREASAAAFKTLSAEGVFSGCVGCVDGWLCAIRAPRLAETGGVGPQRYYSGHYRCYGVNVQA 201
BLAST of mRNA_P-littoralis_Contig120.6.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 3.640e-17 Identity = 52/156 (33.33%), Postives = 78/156 (50.00%), Query Frame = 1
Query: 1 LIEDGTFAQNFRMSPSPFEKLYGILRPRLYLANRSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYVLVGAALDAINDCRRLRVRWPRTAEERWKVAAGFRERSPNFIIRRCLGAVDGVTIKMKKRGKKEHVCPDRFFFGQKKCV 468
L++D TF+ FRM F L LRP L+ N G+ R G I + LRWLAGGSI+E +RS AY + ++A+N C L +WP + ++R+C+GA+DG+ ++M K KE P+ ++ G +K V
Sbjct: 64 LLQDHTFSVRFRMEYDDFRVLIDHLRPALH-KNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMD---------------VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV 203
BLAST of mRNA_P-littoralis_Contig120.6.1 vs. uniprot
Match: A0A225UUP6_9STRA (DDE Tnp4 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UUP6_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 7.450e-17 Identity = 58/167 (34.73%), Postives = 86/167 (51.50%), Query Frame = 1
Query: 1 LIEDGTFAQNFRMSPSPFEKLYGILRPRLYL-----ANRSRGMTRNGPIHPGMALLGCLRWLAGGSIHEVRRVVGCSRSAAYVLVGAALDAINDCRRLRVRWPRTAEERWKVAAGFRERSPNFIIRRCLGAVDGVTIKMKKRGKKEHVCPDRFFFGQKKCVGLNMQV 486
L+++ TF + +RMS S F++L I+ P L + RSRG+ P P L L WLAGGS H +R ++G + + Y +V + AIND +L R+P T +E AA FR S + +I C+G +DG ++ K E FF + GLN+Q
Sbjct: 64 LVKEKTFNRYYRMSFSTFQELLCIVGPYLVVDYYQSLRRSRGIP---PPSPATMLQCALSWLAGGSYHHIRVIMGVNTATFYCIVYRVMFAINDSDKLAPRFPSTPQELSASAAAFRSCSNHGVIENCIGVIDGWFCPVRVPRKDECGRILSFFSRHYQKYGLNVQA 227 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig120.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig120.6.1 >prot_P-littoralis_Contig120.6.1 ID=prot_P-littoralis_Contig120.6.1|Name=mRNA_P-littoralis_Contig120.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=165bp LIEDGTFAQNFRMSPSPFEKLYGILRPRLYLANRSRGMTRNGPIHPGMALback to top mRNA from alignment at P-littoralis_Contig120:61548..62042+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig120.6.1 ID=mRNA_P-littoralis_Contig120.6.1|Name=mRNA_P-littoralis_Contig120.6.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=495bp|location=Sequence derived from alignment at P-littoralis_Contig120:61548..62042+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig120:61548..62042+ >mRNA_P-littoralis_Contig120.6.1 ID=mRNA_P-littoralis_Contig120.6.1|Name=mRNA_P-littoralis_Contig120.6.1|organism=Pylaiella littoralis U1_48|type=CDS|length=495bp|location=Sequence derived from alignment at P-littoralis_Contig120:61548..62042+ (Pylaiella littoralis U1_48)back to top |