mRNA_P-littoralis_Contig853.10.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig853.10.1 vs. uniprot
Match: A0A6H5L599_9PHAE (4Fe-4S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L599_9PHAE) HSP 1 Score: 141 bits (355), Expect = 4.010e-33 Identity = 72/115 (62.61%), Postives = 82/115 (71.30%), Query Frame = 1
Query: 1 VRTAILTCPVDCIHYVDWPELVRLEKERDGIEINFKAKLVGNDHDNAANGMQTISGNQGMRCENCPSRGCYACPMFGVGNNPDYTKRKAERKAKRMALRRKEKEELSGEIKTAEL 345
V+TAIL+CPVDCIHYVD+PELVRLEKER+GI INFKAKLVGNDHDN ANGMQ ISG++GMRC+NCPS+G +KEKEELSGEIK+AEL
Sbjct: 375 VQTAILSCPVDCIHYVDFPELVRLEKEREGISINFKAKLVGNDHDNVANGMQRISGDRGMRCDNCPSKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKEKEELSGEIKSAEL 489
BLAST of mRNA_P-littoralis_Contig853.10.1 vs. uniprot
Match: A0A6U4KL70_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KL70_9STRA) HSP 1 Score: 127 bits (319), Expect = 2.090e-29 Identity = 62/111 (55.86%), Postives = 82/111 (73.87%), Query Frame = 1
Query: 1 VRTAILTCPVDCIHYVDWPELVRLEKERDGIEINFKAKLVGN-DHDNAANGMQTISGNQGMRCENCPSRGCYACPMFGVGNNPDYTKRKAERKAKRMALRR-KEKEELSGE 327
+RTA+ CPVDCIHYV W ELV LE+ER+G++INFK +LVG+ + N GMQ IS N+ RC NCP+ GC+ CPM+GVG NPDY K++ E AKR A ++ K +++SGE
Sbjct: 199 IRTAVSLCPVDCIHYVPWEELVELEQEREGLDINFKGRLVGSAEFANIKGGMQDISSNRSARCSNCPTNGCFNCPMYGVGFNPDYIKKRKEI-AKRAANKKLKALQDISGE 308
BLAST of mRNA_P-littoralis_Contig853.10.1 vs. uniprot
Match: W7TYZ0_9STRA (Ferredoxin n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYZ0_9STRA) HSP 1 Score: 122 bits (307), Expect = 4.350e-28 Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 1
Query: 1 VRTAILTCPVDCIHYVDWPELVRLEKERDGIEINFKAKLVGND----HDNAANGMQTISGNQGMRCENCPSRGCYACPMFGVGNNPDYTKRKAERKAKRMALRRKEKEELS 321
++TAI TCPVDCIHYV + EL RLEKER G+ IN+KA+LVG+D GMQ ISGN+ RC NCPSRGC+ CPMFGVG NP+Y +RK + A++ RR K+ S
Sbjct: 155 IQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFNCPMFGVGENPEY-QRKQRQIAQKRERRRASKDNSS 264
BLAST of mRNA_P-littoralis_Contig853.10.1 vs. uniprot
Match: A0A6U3QLD1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QLD1_9STRA) HSP 1 Score: 115 bits (289), Expect = 4.600e-27 Identity = 64/112 (57.14%), Postives = 73/112 (65.18%), Query Frame = 1
Query: 1 VRTAILTCPVDCIHYVDWPELVRLEKERDGIEINFKAKLV--------GNDH----DNAANGMQTISGNQGMRCENCPSRGCYACPMFGVGNNPDYTKRKAERKAKRMALRR 300
++ AI TCPVDCIH V + ELV+LEKER G INFKA+LV G H N Q ISGN G RC NCPSRGC CPMFGVG NP+Y +++ ERKAK M LRR
Sbjct: 29 IQIAIETCPVDCIHCVPFDELVKLEKERRGQNINFKARLVSQGEYGGLGLSHRVGGPNGFTAPQKISGNMGSRCNNCPSRGCKDCPMFGVGKNPEYERKEKERKAK-MELRR 139
BLAST of mRNA_P-littoralis_Contig853.10.1 vs. uniprot
Match: A0A7S0FI65_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FI65_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.940e-25 Identity = 64/126 (50.79%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 1 VRTAILTCPVDCIHYVDWPELVRLEKERDGIEINFKAKLV-----GNDHDNAANGM------QTISGNQGMRCENCPSRGCYACPMFGVGNNPDYTKRKAERKAKRMALRRKEKEELSGEIKTAEL 345
+ AI TCPVDCIHYV + ELVRLE ER +INFKA+LV G D + G Q ISGN G RC NCPSRGC C M+GVG NP++ K++ RK +R R+ +E+L+ E K+AEL
Sbjct: 68 IAVAIETCPVDCIHYVPYDELVRLEVERRDQQINFKARLVNQGEYGGDSGHRIGGAVQFSGPQKISGNAGARCNNCPSRGCKNCLMYGVGENPEFKKKEEMRKQRRA--RKLMQEKLANENKSAEL 191
BLAST of mRNA_P-littoralis_Contig853.10.1 vs. uniprot
Match: A0A448Z963_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z963_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.090e-24 Identity = 65/124 (52.42%), Postives = 82/124 (66.13%), Query Frame = 1
Query: 1 VRTAILTCPVDCIHYVDWPELVRLEKERDGIEINFKAKLV--GNDHDNAANGM-------QTISGNQGMRCENCPSRGCYACPMFGVGNNPDYTKRKAERKAKRMALRRKEKEELSGEIKTAEL 345
V TAI TCPVDCIHYV + ELV LEK+R G +IN +A+LV G A+ G QTISGN RC NCP+RGC CPMFGVG NP+Y +R+A RKA + RR+ + + + E K+A+L
Sbjct: 276 VATAIETCPVDCIHYVPYEELVTLEKDRRGQKINNQARLVNQGESAHMASTGSSSQFTAPQTISGNASARCSNCPTRGCKTCPMFGVGKNPEYERREALRKANQQ--RRRLERQRADESKSADL 397
BLAST of mRNA_P-littoralis_Contig853.10.1 vs. uniprot
Match: A0A7S1B2W1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B2W1_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.920e-24 Identity = 63/125 (50.40%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 1 VRTAILTCPVDCIHYVDWPELVRLEKERDGIEINFKAKLV-------GNDH---DNAANGMQTISGNQGMRCENCPSRGCYACPMFGVGNNPDYTKRKAERKAKRMALRRKEKEELSGEIKTAEL 345
++ AI TCPVDCIHY+ + EL RLE ER G INFKA+LV G H N G Q ISGN G RC NCPSRGC CPM+GVG NPD+ K++ ERK+++ ++ K++L ++AEL
Sbjct: 320 IQVAIETCPVDCIHYIPYDELERLEIERRGQNINFKARLVNQGEYGGGTGHRVGGNGFTGAQVISGNLGNRCNNCPSRGCQNCPMYGVGMNPDFQKKEDERKSRKKE--KQLKDQLEQLDRSAEL 442
BLAST of mRNA_P-littoralis_Contig853.10.1 vs. uniprot
Match: A0A7S2ENQ4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENQ4_TRICV) HSP 1 Score: 110 bits (276), Expect = 2.880e-23 Identity = 60/126 (47.62%), Postives = 79/126 (62.70%), Query Frame = 1
Query: 1 VRTAILTCPVDCIHYVDWPELVRLEKERDGIEINFKAKLV-------GNDHDNAANGM----QTISGNQGMRCENCPSRGCYACPMFGVGNNPDYTKRKAERKAKRMALRRKEKEELSGEIKTAEL 345
++ AI TCPVDCIHYV + ELVRLE ER INFKA+LV G H + + Q ISGN RC NCPSRGC CPM+G+G NP++ K++ RK +R R+ KE++ E ++A+L
Sbjct: 223 IQVAIETCPVDCIHYVPYDELVRLEVERRDQNINFKARLVNQGEYGGGTSHRVGGSSVFTAPQKISGNMAPRCNNCPSRGCRDCPMYGIGENPEFKKKEQARKERRA--RKLMKEKMESENRSADL 346
BLAST of mRNA_P-littoralis_Contig853.10.1 vs. uniprot
Match: A0A4D9D529_9STRA (4Fe-4S ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D529_9STRA) HSP 1 Score: 111 bits (277), Expect = 7.190e-23 Identity = 59/111 (53.15%), Postives = 74/111 (66.67%), Query Frame = 1
Query: 1 VRTAILTCPVDCIHYVDWPELVRLEKERDGIEINFKAKLVGND----HDNAANGMQTISGNQGMRCENCPSRGCYACPMFGVGNNPDYTKRKAERKAKRMALRRKEKEELS 321
++TAI TCPVDCIHYV + EL RLEKER G+ IN+KA+LVG+D GMQ ISGN+ RC NCPSRGC+ GVG NP+Y +RK + A++ RR K+ S
Sbjct: 155 IQTAIETCPVDCIHYVPFEELERLEKERAGMTINYKARLVGSDGLLSSSGGDQGMQEISGNKDFRCGNCPSRGCFXXXXXGVGENPEY-QRKQRQIAQKRERRRASKDNSS 264
BLAST of mRNA_P-littoralis_Contig853.10.1 vs. uniprot
Match: A0A7S1VLY3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VLY3_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.640e-21 Identity = 57/104 (54.81%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 1 VRTAILTCPVDCIHYVDWPELVRLEKERDGIEINFKAKLVGNDHDNAANGMQ-------------TISGNQGMRCENCPSRGCYACPMFGVGNNPDYTKRKAER 273
++ AI TCPVDCIHYV + EL +LE ER INFKA+LVG DN GM ISGN G RC NCPSRGC CPMFGVG NP + KR+ ER
Sbjct: 244 IQIAIETCPVDCIHYVPFDELKKLEVERRDQNINFKARLVGGG-DNGGVGMAHMVGGAAKFTPAPEISGNMGSRCNNCPSRGCRDCPMFGVGKNPAFEKREKER 346 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig853.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig853.10.1 >prot_P-littoralis_Contig853.10.1 ID=prot_P-littoralis_Contig853.10.1|Name=mRNA_P-littoralis_Contig853.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=116bp VRTAILTCPVDCIHYVDWPELVRLEKERDGIEINFKAKLVGNDHDNAANGback to top mRNA from alignment at P-littoralis_Contig853:77205..80988- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig853.10.1 ID=mRNA_P-littoralis_Contig853.10.1|Name=mRNA_P-littoralis_Contig853.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3784bp|location=Sequence derived from alignment at P-littoralis_Contig853:77205..80988- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig853:77205..80988- >mRNA_P-littoralis_Contig853.10.1 ID=mRNA_P-littoralis_Contig853.10.1|Name=mRNA_P-littoralis_Contig853.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=348bp|location=Sequence derived from alignment at P-littoralis_Contig853:77205..80988- (Pylaiella littoralis U1_48)back to top |