mRNA_P-littoralis_Contig853.7.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig853.7.1
Unique NamemRNA_P-littoralis_Contig853.7.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig853.7.1 vs. uniprot
Match: A0A6H5JAK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK8_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 4.260e-66
Identity = 134/272 (49.26%), Postives = 157/272 (57.72%), Query Frame = 2 
Query:   17 VSVVETKKGKGYGGTIWVYLNTRSDNFDLCWPGPGFVVIVTQQFCFSGYKNLKKYDKQGTKGMEVGRSGDFLTSSTKARTATVDGVKVTVPEDAWFGHEAPTPVQQTAMDQRSEDSARGARGGLTVAQWENPTTADQRXXXXXXXXXXAKGGAAQSGEQEKPNPNPRGPGRAGVKEFDYDPYRRSIGFHYRGYKENGKLVMSGNTFEFFEYSIGNMENGAWILGTHQFSGKGKRLSSYPYRKNGTRLQTDAKVGRIDSYLKSLARDHGKEQG 832
            VS+VET   K   G  W+++                V+I  + +C  G  N          G + GR         K +     G +  V ED W G   PT  +Q  M ++ E+++ G                                G  QSGE EKPNPNPRGPGRAG+KEFDY PYRR IGFHYRGYKENGKLVMSG+T EFFEYSI NMENGAWILGT+QFSG+GKRLSSYPYRKNGTR+QTDAK+ RIDSYLKS ARDHG+EQG
Sbjct:  270 VSLVETTPKKSRSGDPWIFVT---------------VMINNRNWCGIGRANYT--------GEQKGRE-------KKTKELKAAGGQYGVDEDVWNGKREPTAQEQRLMKKKREETSAG--------------------------------GVVQSGEHEKPNPNPRGPGRAGIKEFDYRPYRRFIGFHYRGYKENGKLVMSGDTLEFFEYSISNMENGAWILGTYQFSGRGKRLSSYPYRKNGTRVQTDAKIERIDSYLKSKARDHGEEQG 479
[Close]
BLAST of mRNA_P-littoralis_Contig853.7.1 vs. uniprot
Match: D7FUP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP9_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 5.070e-58
Identity = 103/121 (85.12%), Postives = 109/121 (90.08%), Query Frame = 2 
Query:  470 GAAQSGEQEKPNPNPRGPGRAGVKEFDYDPYRRSIGFHYRGYKENGKLVMSGNTFEFFEYSIGNMENGAWILGTHQFSGKGKRLSSYPYRKNGTRLQTDAKVGRIDSYLKSLARDHGKEQG 832
            GA QSGEQEKPNPNPRGPG AGVKEFDY P+RRSIGFHYRGYKEN KLVMS NTFEFFEYSIGNMENGAWILGTH FS +GKRLSS PYRK+GTR+QT+AKV R D YLK+ ARDHGKEQG
Sbjct:  287 GAVQSGEQEKPNPNPRGPGGAGVKEFDYRPHRRSIGFHYRGYKENDKLVMSDNTFEFFEYSIGNMENGAWILGTHHFSSQGKRLSSDPYRKDGTRVQTEAKVMRNDGYLKNKARDHGKEQG 407
[Close]
BLAST of mRNA_P-littoralis_Contig853.7.1 vs. uniprot
Match: A0A6H5L5E5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E5_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 5.300e-23
Identity = 59/127 (46.46%), Postives = 77/127 (60.63%), Query Frame = 2 
Query:    2 VRRRGVSVVETKKGKGYGGTIWVYLNTRSDNFDLCWPGPGFVVIVTQQFCFSGYKNLKKYDKQGTKGMEVGRSGDFLTSSTKARTATVDGVKVTVPEDAWFGHEAPTPVQQTAMDQRSEDSARGARG 382
            VRRRG+S+V T++G   GG  WVYL T  DN++ CW GPGF++ VTQQ CFSGYKNLK++DK+G + MEVGRSGDF T + K +    + V       A      P P Q+  + +       GA G
Sbjct:  351 VRRRGLSLVRTREGTTRGGEPWVYLVTVIDNWEHCWSGPGFLLFVTQQGCFSGYKNLKEHDKEGARQMEVGRSGDFSTPAAKGKIGGANQVGSAPSNGAAAKVRKPIPGQRNPVKEYGFCFGFGADG 477
[Close]
BLAST of mRNA_P-littoralis_Contig853.7.1 vs. uniprot
Match: D7FLR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR6_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 1.590e-20
Identity = 61/144 (42.36%), Postives = 81/144 (56.25%), Query Frame = 2 
Query:    2 VRRRGVSVVETKKGKGYGGTIWVYLNTRSDNFDLCWPGPGFVVIVTQQFCFSGYKNLKKYDKQGTKGMEVGRSGDFLTSSTKART------------ATVDGVKVTVPEDAWFGHEAPTPVQQTAMDQRSEDSARGARGGLTVA 397
            V+ RG+S+V TK+G   GG  WV+L T  DN++ CW GPGFVV +T  +CF+GYKNLK++D++G   MEVGRSGDF T S K +             ATV+G +           EA      TA +Q +      A+G L VA
Sbjct:  338 VQGRGLSLVRTKEGTTRGGNPWVWLVTVIDNWEYCWSGPGFVVFMTHNWCFAGYKNLKEHDRKGANQMEVGRSGDFSTPSAKGKVNGPKSNFGMTANATVEGARARE-----VAAEAAVEAAYTAEEQAA------AQGHLVVA 470
[Close]
BLAST of mRNA_P-littoralis_Contig853.7.1 vs. uniprot
Match: D7G6J6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J6_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 3.860e-18
Identity = 48/81 (59.26%), Postives = 60/81 (74.07%), Query Frame = 2 
Query:    8 RRGVSVVETKKGKGYGGTIWVYLNTRSDNFDLCWPGPGFVVIVTQQFCFSGYKNLKKYDKQGTKGMEVGRSGDFLTSSTKA 250
            + G+S+V+TK+G   GG  WVYL T   N++ CW GP FV +VT+  CFSGYKNL K+DK  T+GMEVGRSGDF T +TKA
Sbjct:  226 QHGLSLVKTKEGSTRGGEPWVYLVTVIGNWEYCWSGPFFVAMVTRWGCFSGYKNLGKHDKT-TRGMEVGRSGDFSTPATKA 305
[Close]
BLAST of mRNA_P-littoralis_Contig853.7.1 vs. uniprot
Match: D7FWV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV7_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 4.680e-18
Identity = 48/81 (59.26%), Postives = 60/81 (74.07%), Query Frame = 2 
Query:    8 RRGVSVVETKKGKGYGGTIWVYLNTRSDNFDLCWPGPGFVVIVTQQFCFSGYKNLKKYDKQGTKGMEVGRSGDFLTSSTKA 250
            + G+S+V+TK+G   GG  WVYL T   N++ CW GP FV +VT+  CFSGYKNL K+DK  T+GMEVGRSGDF T +TKA
Sbjct:  226 QHGLSLVKTKEGSTRGGEPWVYLVTVIGNWEYCWSGPFFVAMVTRWGCFSGYKNLGKHDKT-TRGMEVGRSGDFSTPATKA 305
[Close]
BLAST of mRNA_P-littoralis_Contig853.7.1 vs. uniprot
Match: A0A6H5KU43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU43_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 4.480e-12
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 2 
Query:    8 RRGVSVVETKKGKGYGGTIWVYLNTRSDNFDLCWPGPGFVVIVTQQFCFSGYKNLKKYDKQGTKGMEVGRSGDFLTSSTKAR 253
            ++ +S+V+T+ G   GG  WVY    + N++ CW GP F+V+VTQQ CF+G  NL + DK+    MEVGRSGD  T  TK R
Sbjct:  275 KKKLSLVKTRGGTTSGGEQWVYYVLAATNWEYCWSGPAFMVLVTQQACFTGKINLWQKDKR-VNHMEVGRSGDLSTPETKGR 355
[Close]
BLAST of mRNA_P-littoralis_Contig853.7.1 vs. uniprot
Match: A0A6H5KF00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF00_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 6.270e-8
Identity = 37/83 (44.58%), Postives = 47/83 (56.63%), Query Frame = 2 
Query:  188 QGTKGMEVGRSGDFLTSSTK--ARTATVDGVKVTVPEDAWFGHEAPTPVQQTAMDQRSEDSARGARGGLTVAQWENPTTADQR 430
            +G+  +     G F     +  ARTATVDG KV +P     G+EAPTP+QQ  MDQRSEDS+RG    +     EN  TA +R
Sbjct:  162 RGSTSLNQKLGGTFTDEQRRRGARTATVDGAKVRIPMAVVEGNEAPTPLQQRTMDQRSEDSSRGDNNSVGAGPNENKATAKRR 244
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig853.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JAK8_9PHAE4.260e-6649.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUP9_ECTSI5.070e-5885.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5E5_9PHAE5.300e-2346.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLR6_ECTSI1.590e-2042.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G6J6_ECTSI3.860e-1859.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWV7_ECTSI4.680e-1859.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU43_9PHAE4.480e-1247.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF00_9PHAE6.270e-844.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig853contigP-littoralis_Contig853:62437..66632 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2490
Hectar predicted targeting categoryother localisation
Exons4
Cds size633
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig853.7.1prot_P-littoralis_Contig853.7.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig853 64092..66430 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791723.2164774-UTR-P-littoralis_Contig853:62436..640911680791723.2164774-UTR-P-littoralis_Contig853:62436..64091Pylaiella littoralis U1_48UTRP-littoralis_Contig853 62437..64091 -
1680791723.28557-UTR-P-littoralis_Contig853:66430..666321680791723.28557-UTR-P-littoralis_Contig853:66430..66632Pylaiella littoralis U1_48UTRP-littoralis_Contig853 66431..66632 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791723.2300339-CDS-P-littoralis_Contig853:64091..644561680791723.2300339-CDS-P-littoralis_Contig853:64091..64456Pylaiella littoralis U1_48CDSP-littoralis_Contig853 64092..64456 -
1680791723.2420332-CDS-P-littoralis_Contig853:64688..647841680791723.2420332-CDS-P-littoralis_Contig853:64688..64784Pylaiella littoralis U1_48CDSP-littoralis_Contig853 64689..64784 -
1680791723.2560086-CDS-P-littoralis_Contig853:65682..658081680791723.2560086-CDS-P-littoralis_Contig853:65682..65808Pylaiella littoralis U1_48CDSP-littoralis_Contig853 65683..65808 -
1680791723.2716377-CDS-P-littoralis_Contig853:66384..664301680791723.2716377-CDS-P-littoralis_Contig853:66384..66430Pylaiella littoralis U1_48CDSP-littoralis_Contig853 66385..66430 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig853.7.1

>prot_P-littoralis_Contig853.7.1 ID=prot_P-littoralis_Contig853.7.1|Name=mRNA_P-littoralis_Contig853.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=211bp
MEVGRSGDFLTSSTKARTATVDGVKVTVPEDAWFGHEAPTPVQQTAMDQR
SEDSARGARGGLTVAQWENPTTADQRKKKKKRLEDDAKGGAAQSGEQEKP
NPNPRGPGRAGVKEFDYDPYRRSIGFHYRGYKENGKLVMSGNTFEFFEYS
IGNMENGAWILGTHQFSGKGKRLSSYPYRKNGTRLQTDAKVGRIDSYLKS
LARDHGKEQG*
back to top

mRNA from alignment at P-littoralis_Contig853:62437..66632-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig853.7.1 ID=mRNA_P-littoralis_Contig853.7.1|Name=mRNA_P-littoralis_Contig853.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4196bp|location=Sequence derived from alignment at P-littoralis_Contig853:62437..66632- (Pylaiella littoralis U1_48)
GGTCCGTCGCCGGGGAGTGTCGGTGGTGGAGACGAAGAAGGGGAAGGGTT
ATGGCGGAACAATCTGGGTGTATCTCAATACCCGGTCCGACAACTTCGAT
TTGTGCTGGCCAGGGCCGGGTTTCGTGGTGATCGTGACGCAGCAGTTTTG
CTTTTCGGGTTACAAGAACCTGAAGAAGTATGACAAGCAGGGAACAAAGG
GGATGGAGGTCGGACGATCGGGGGACTTCTTGACTAGCTCGACAAAGGGT
GAGTAGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGATGA
TGATATTATGGATATTGTAGTATACCCTTGACACAGTGGCAGAGAGGCTG
TGCCCTCGACGTTAGTCGAGTTGGTGACACGGGCGAGCAGTTCACCAGGA
AGCTGAAGATACTTCCAAGATGTGGAGAAGATTATGCGAAATTGTACACA
CGGCGCTTAGGTGGCCAAACACACACAAACAACCACAGAGTATGCAGAAG
CCAGGAAGACGGCTGCTTCCCGGAGACGACCCAGGACAGCTAATATGCCA
TGACTATCCAAAGAGATCCACACGAGAGAGTGCCACATAGACGTACTCGA
TCCCGCAAGTAGAGAACCAAGAGGAAGTAGTTCCTCCGCATACACATACG
TTATACACTTGAACGGATACAATGAGATCTACGATGCAAGAGCAGGGCTA
CTGAACATTGACACGAACAGGCCATGTGCTATCAATTCCTTAACAGATGA
AGATGCTGCTGCTGCGGGAGTTGACAACGACTAGCATGCATTTTCCCAAT
GATCGACTTTCTGGTTTTTTGCAGCGAGGACAGCAACCGTGGACGGGGTG
AAGGTCACGGTGCCGGAGGACGCGTGGTTTGGACACGAGGCCCCGACACC
CGTCCAGCAAACGGCTATGGACCAACGGTCGGAGGACAGCGCGCGCGGGG
GTAAGATGTTGTTGTTGTTGTTGTTGGTCACATTACAAGCCGCCTCCTCG
GCAATCGAGTTGTGAAAAGGCGTATAAAAAGGCTTAATCCTTTAAAAGAC
TAGGATATCACCTTGTAGTTACTGAGTTCTGTAGTTTGCGTTAAAGATCA
GTAGCAGAGACGGGAGAGGTTGTGGAGTGTGCGGTAGGACGCTGCTGTAT
TTGGATTTGAAATCTTTCTGGGCTTGTAAACAAGTAATTCCGTCAATCCG
CCGTCCAGGAATCGATCACCTGCAAGGTTGCCTGTAAAGCACGTCCAGTG
ACATAACCTGCAGTACAGTACCTGGGACCTGATAAGACAGCATACATGCG
AGCACATACCGTTTAACATCTTCATTTATCTTCATTTATCCACATCATTC
ATCCTCATTGGGTATCACTCGGGTCTCGTCTGGGTCACTGAACACAACAC
AACACAACACAACACACCCTTGCCTCACGACATGGTCTAGTCGGCTAAAC
TACTGTCCTGTCACCTATTTCTAGTAACCGTCAAACCACGCCGCCGTAAC
AGTTGTGCAAGTCACCCGACGCAACCAAAGCATCACCGCTCCCTCATGAG
CGGGATGCATCGATACCACGGCGTGCGTCTGACCCGTTGAACGAACCAAA
ATGCTGTCGGTTGTTTGTTGATTGTCTTCAGCAAGCAGTGGGTTCAACCG
CAAACAGCGATTAGATGAGATGCAAAGTATACTCGTGTGTTTATGAAGAA
ATGTTCGTCACTCTTGGTGTTCGCTGCTGCAGCTCTGGCTGCATAATATT
AATATTTCATTGAAACCCTTACGACCGCTCTTGGTCTCGCACTCGACATG
ATGATTCGTTTCATTGTTTTGTACTCTCTGTGCTCGGTGCTGTCACAGCG
AGGGGCGGTCTGACCGTCGCTCAGTGGGAAAACCCCACGACCGCGGACCA
GAGGAAGAAGAAGAAGAAGAGGCTGGAGGACGATGCCAAGGGGGGTGAGT
CTTTCCTCATGTGCCCCGCACCCCACTCACTCTCGGCATCCCCGCCCCCT
TGTGCATTTGATATGTCGATAGCAAGGCGTGCAAGGGACCAGTGGGATGA
AGTTTCTCGCGGAGTACAATACCGTTACATCCGTCGCCTGTGGAAGCTCG
TATTTCCTCTTGCGAACAAGACGCTCAAAAACTCGGCTTTGTCTCCTCTG
AATGATTCTTCCAAACGAATTTTCAGGGGCGGCACAATCGGGAGAGCAAG
AGAAACCCAACCCCAACCCGCGAGGCCCCGGTAGAGCCGGCGTCAAGGAG
TTCGACTATGACCCTTACCGCCGCTCCATCGGCTTCCACTACCGTGGTTA
CAAGGAGAATGGCAAGCTCGTCATGTCGGGCAACACGTTCGAGTTCTTCG
AGTACAGCATCGGCAACATGGAGAACGGGGCGTGGATTCTGGGCACCCAC
CAGTTCAGCGGCAAAGGCAAAAGGTTGTCCTCCTACCCATACCGTAAGAA
CGGCACAAGGCTCCAGACAGACGCCAAGGTAGGGAGAATCGACAGCTACC
TGAAGAGCCTGGCCAGGGATCACGGGAAGGAGCAGGGGTAGGCGGGCATT
CAGCACAAGGGCGAACGGGCATCTACCAAATATTTGATCGTGCCTTTCGG
CTGCTACTGCCAGGACATATGCGCGGGGTCTTTCGGGGTAGAAATCTCAA
AAAGATGTTGTTGTAGTTGTGAGAATCCTCCTTTTATGTGCAGATATCTT
TGCGGTGGTGTGTGCGTATGGTGTGTGCGTATCTGTTTATGCAACACAAC
ACCCCGACTTAGAAGTGTTTGTCCCGGGGTTTCAGTCTCAGTCATTCGGA
TGTGTCTGAACATTTAGTTTCATACACCTTGTTCGATGGTGTTGGCGTGA
AGAATTGATGAAATTTGTGTGAAAGTTGTATGGAAGTACTAAGTTATGTA
TGAAGGTAGATTTTTGAACACACACGTGGACATCCAGCTTGCGAGATGTA
GGGCCAGCCAGTGATGACGTGATGGGAGTGGATGGAATTGCTCTAGGAAT
GGAAGGCGCTGCGTTGCCCACACTGCATTTGTTTGCGGATTTGGGAATTG
ATTCGAGAGATCAGTAGCAAAACGCGCGAAAATGATAGCCAACAATATGT
ACATGCTCGCCCTAGAGATTTGAGAGAGAGAGTTTTTGTGTTTGATTTCT
GGGTAATTGCCGGTCGACATTTACTTTTACTTCATGAGGGACATTTTTAC
GACCACTCGCCGTACTTTAGATGGTACATGGCTACCCGTGGGCTGTTTAG
GGTTCGTGCATGCGAATCGATGTTGTTGTGTCAACGGGCTCTGGTGTGTT
ACATTTCGACCCAGTCATCAAATGTATGTTCAAATGAGCCGGGTCGACGG
AGCGATTGTGATTGTTTTGTTCGAAACTTTGATTGGAGATGATTGGGTAT
TATTATTATTATTTGTATTATTAGATAGAAGAACATTTGCCTGGTCTACC
GCAAGTGGTGTTGTGGGTTCATACATGGAAGTCAAAACGAGCTCTGACTT
GTACGAAGAATGGCTCTTCGGTGGCGTTGAAGTGATGGGGAATGGAAAGA
GACCACCCGCAGGCTTCCTGCATAGATTAGCTTGAGTCGTGCCAACTGAA
GTTTTTTCGTCTCCCTTTATCATTTATGAGTCCGATACATATACTTATAT
ATTTTTGGTCGGCAGATTCAGCGTGTATATTCTCACTCGGAGGTGGTTTT
GAAGGTGATTAGTCGGCGGTTATTCGTGACTTTACTGTGGGATTTCGACC
ATTCATTGTATGCGGAATGTTTTGGAGTACAAAAAGCGTTGTGTGTTCGT
TCATACATGATGGTCAAGATGAACGAGTGCCTGGGGTTTTAGTCGGGAAC
ACAGTTCTCTTGTGACTTGATTGTATCATTGTACTGTGTGTGGATATTGT
GCGATCGTGCGCATTTTTTTCCTCTATCTGGGTCACCAAAGGTGATCAAT
TAGGAGCCTTCGGGTTTAGAGTTCACTGTGTTGACCGTGTTGCCTACGCA
GGCGCCAGCATGGAGTAGACAACGGAGTGCTTCCCCAACTGGGAAAACGA
AACGTGGGTGTTTACGCTATCAAGGGCAAAAATGAATATTGTGTTTGGGC
GGTTGGCCAAGGGCCGGATGACGATAAGACGTCTGGAGCAAGGGTTCAGA
ATGTCCAATGCCTGTGATCGTCTTCCTTGATCCCTTTCACTCTCAC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig853:62437..66632-

>mRNA_P-littoralis_Contig853.7.1 ID=mRNA_P-littoralis_Contig853.7.1|Name=mRNA_P-littoralis_Contig853.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=633bp|location=Sequence derived from alignment at P-littoralis_Contig853:62437..66632- (Pylaiella littoralis U1_48)
ATGGAGGTCGGACGATCGGGGGACTTCTTGACTAGCTCGACAAAGGCGAG
GACAGCAACCGTGGACGGGGTGAAGGTCACGGTGCCGGAGGACGCGTGGT
TTGGACACGAGGCCCCGACACCCGTCCAGCAAACGGCTATGGACCAACGG
TCGGAGGACAGCGCGCGCGGGGCGAGGGGCGGTCTGACCGTCGCTCAGTG
GGAAAACCCCACGACCGCGGACCAGAGGAAGAAGAAGAAGAAGAGGCTGG
AGGACGATGCCAAGGGGGGGGCGGCACAATCGGGAGAGCAAGAGAAACCC
AACCCCAACCCGCGAGGCCCCGGTAGAGCCGGCGTCAAGGAGTTCGACTA
TGACCCTTACCGCCGCTCCATCGGCTTCCACTACCGTGGTTACAAGGAGA
ATGGCAAGCTCGTCATGTCGGGCAACACGTTCGAGTTCTTCGAGTACAGC
ATCGGCAACATGGAGAACGGGGCGTGGATTCTGGGCACCCACCAGTTCAG
CGGCAAAGGCAAAAGGTTGTCCTCCTACCCATACCGTAAGAACGGCACAA
GGCTCCAGACAGACGCCAAGGTAGGGAGAATCGACAGCTACCTGAAGAGC
CTGGCCAGGGATCACGGGAAGGAGCAGGGGTAG
back to top