prot_P-littoralis_Contig850.17.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig850.17.1
Unique Name	prot_P-littoralis_Contig850.17.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	581

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: D7G400_ECTSI (CCT-eta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G400_ECTSI)

HSP 1 Score: 1087 bits (2812), Expect = 0.000e+0
Identity = 564/580 (97.24%), Postives = 576/580 (99.31%), Query Frame = 0

Query:    1 MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 580
            MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQ+ICRGLRKACEVAV RLDAVS+KPTDD QAKDVL+RCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLL LSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSF+NPGVLLLNVELELKSEKESAEVRISDPD+YQEIVDAEW+IIYDKL+KCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITA+V+GHCE+FEETQLGNERWNLFTGCPEARTATI+LRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHAR G+AGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA
Sbjct:    1 MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQVICRGLRKACEVAVGRLDAVSVKPTDDAQAKDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLDLSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWNIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITADVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARGGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 580

[Close]

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A836CEV1_9STRA (T-complex protein 1 subunit eta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEV1_9STRA)

HSP 1 Score: 867 bits (2239), Expect = 7.070e-313
Identity = 439/582 (75.43%), Postives = 510/582 (87.63%), Query Frame = 0

Query:    1 MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGG-PISAGMGXXXXXXXXXXXGRGQRP-GVKMMKGRGGA 580
            MS+M QPGIILLREGTD SQGKAQL+SNINACQAV+D VR+TLGPRGMDKLIFDG+KVTISNDGATIMKLLDIAHPAAK LVD+S+SQDAEVGDGTT+VVLL+GE+LKHVKGF+EDG++PQ+I RGLR+A +VA+ARL+A+S+K TDD  A+ VL +CAGTALNSKLI+SQ+ LFAPM+VEAVS LD +L  + ++G+KKV GGSVTDSFLV+GVAFKKTFSYAGFEQQPK FENP +LLL+VELELKSEKE+AEVRISDPD YQ IVDAEWSIIY+KLD CVA+GA+IILSKLP+GDLATQ+FADR LFCAGRV  +DMER+++ATGG+VQ++  GI A VLG CEKFEE QLG ER+NLFTGCP+ARTATI+LRGGSEQF+EES RS+HD+LM+VKR LK  EVVAGGGAIEMELSKALR+ S+ I GK+QL+M + AKALEI+PRQL++NAG D+TD+LNRLR  HA+ G+ G+W GV VD E VCDT   GVWEPTINKRN+LRSA EAACLILSIDETV+NPQSE+ GAPSQGVGLGRGG PISAGMG           GRG+ P GV+ MKGR GA
Sbjct:    1 MSHMLQPGIILLREGTDQSQGKAQLISNINACQAVVDAVRTTLGPRGMDKLIFDGRKVTISNDGATIMKLLDIAHPAAKVLVDVSVSQDAEVGDGTTTVVLLSGEVLKHVKGFIEDGVNPQVIIRGLRRAGDVAIARLNALSVKATDDASARAVLEKCAGTALNSKLIASQRGLFAPMIVEAVSLLDARLADVKMVGIKKVPGGSVTDSFLVRGVAFKKTFSYAGFEQQPKHFENPKILLLSVELELKSEKENAEVRISDPDAYQAIVDAEWSIIYEKLDACVAAGAQIILSKLPIGDLATQYFADRQLFCAGRVEPEDMERISRATGGRVQSTTSGIEASVLGTCEKFEEVQLGEERFNLFTGCPKARTATIVLRGGSEQFLEESQRSMHDALMVVKRSLKACEVVAGGGAIEMELSKALREASRAISGKEQLVMGAVAKALEIVPRQLSENAGLDSTDVLNRLRHAHAQPGDGGRWIGVSVDEEDVCDTMAKGVWEPTINKRNALRSAIEAACLILSIDETVRNPQSEQPGAPSQGVGLGRGGQPISAGMGGMGMAGMMGA-GRGKLPRGVRAMKGRAGA 581

[Close]

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A7R9UFR0_9STRA (CCT-eta n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFR0_9STRA)

HSP 1 Score: 798 bits (2062), Expect = 6.340e-286
Identity = 405/584 (69.35%), Postives = 484/584 (82.88%), Query Frame = 0

Query:    1 MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAP-SQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQR---PGVKMMKGRGGA 580
            MS M QPGIILLREGTD+SQGKAQ++SNINAC AV +T+++TLGPRGMDKLIFDG+KVTISNDGATIM+LLD+ HPAAKTLVDISMSQDAEVGDGTTSVVL+A  IL  +K FVEDGLHPQII RG+RKA  +AV R+  +++     ++A+ +LV CAGTALNSKLIS+ KD+FAPMVV+AVS LD QLL L L+G+KKV GGSV  SFLV+GVAFKKTFSYAGFEQQPK F +P +LLLNVELELKSEKE+AE+RI+DPD YQ IVDAEW IIYDKL+ CVASGAKIILSKLP+GDLATQ+FADR+LFCAGRV  +DM RVAKATGG VQ + H I    LGHC+ FEE Q+G+ER+NLFTGCP +RTATI+LRGGSEQF++E+HRSIHD+L IVKR +++ EVVAGGGAIEME+SK +R+ ++ I+GK+QLIM+S A+ALE+IPRQLADNAGFDAT++LN LR KHA+D E G+W+GV+VD EG+ DTF+S VWEP  NK NS  +A+EAACLILSIDETV+NP++E+ GA  + GVGLG GG    G             G G+R    GV+  KGRGGA
Sbjct:    1 MSMMMQPGIILLREGTDTSQGKAQIISNINACAAVAETIKTTLGPRGMDKLIFDGRKVTISNDGATIMRLLDVVHPAAKTLVDISMSQDAEVGDGTTSVVLIAASILDEMKSFVEDGLHPQIIIRGIRKAANLAVQRVKDLAVSMRGGDEARQLLVTCAGTALNSKLISNHKDMFAPMVVDAVSMLDPQLLDLDLVGIKKVSGGSVRQSFLVEGVAFKKTFSYAGFEQQPKKFSDPDILLLNVELELKSEKENAEIRITDPDQYQSIVDAEWRIIYDKLEACVASGAKIILSKLPIGDLATQYFADRDLFCAGRVTNEDMMRVAKATGGVVQCTCHDIQTSALGHCQHFEERQVGDERYNLFTGCPRSRTATIVLRGGSEQFIDETHRSIHDALCIVKRAMRSGEVVAGGGAIEMEVSKFVREEARKIEGKEQLIMNSMARALEVIPRQLADNAGFDATEVLNNLRMKHAKD-EKGRWYGVNVDVEGITDTFQSNVWEPAPNKVNSFAAASEAACLILSIDETVRNPRTEQPGAADANGVGLGPGGGGMGGRRGKAPGGMPPMGGGGRRGMPKGVRAFKGRGGA 583

[Close]

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A7S1U8Z7_9STRA (CCT-eta n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8Z7_9STRA)

HSP 1 Score: 793 bits (2048), Expect = 3.160e-283
Identity = 405/590 (68.64%), Postives = 490/590 (83.05%), Query Frame = 0

Query:    1 MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAP-SQGVGLG---------RGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 580
            MS+M QPGIILLREGTD+SQGKAQ+VSNINAC AV +T+++TLGPRGMDKLIFDG+KVTISNDGATIM+LLD+ HPAAKTLVDISMSQDAEVGDGTTSVVL+A  IL  +K FV+DGLHPQII RG+R+A  +AV R+  + +     E+A+ +L  CAGTALNSKLIS  +DLFAPMVV+AVS LD +LL L+L+G+KKV GGSV  SFLV+GVAFKKTFSYAGFEQQPKSF NP +LLLNVELELK+EKE+AEVRI+DPD YQ IVD EW IIYDKL+ CVASGAKIILSKLP+GDLATQ+FADR++FCAGRVA +D+ RV KATG  +Q + H I    LG C++FEE Q+G+ER+NLFTGCP +RTATI+LRGGSEQF++E+HRS+HD+L IVKR +++ EVVAGGGAIEME+SK +R+ +++I+GK+QLIM+  A+ALE+IPRQL+DNAGFDAT++LN+LR KHA+ G AGKW+GVDVD EG+ DTFESGVWEP  NK NS  +A+EAAC+ILSIDETV+NP+SE+ GA  + GVGLG         RG P+SA MG        XXX RG   GV+  +GRGGA
Sbjct:   31 MSHMMQPGIILLREGTDTSQGKAQIVSNINACAAVAETIKTTLGPRGMDKLIFDGRKVTISNDGATIMRLLDVVHPAAKTLVDISMSQDAEVGDGTTSVVLIAASILNEMKHFVDDGLHPQIIIRGIRRAANLAVDRVRELGVAMHSTEEARKLLETCAGTALNSKLISHHQDLFAPMVVDAVSMLDPELLDLNLVGIKKVPGGSVRQSFLVEGVAFKKTFSYAGFEQQPKSFSNPEILLLNVELELKAEKENAEVRITDPDQYQSIVDTEWRIIYDKLEACVASGAKIILSKLPIGDLATQYFADRDIFCAGRVANEDVLRVQKATGAVMQCTCHDINKSDLGRCDRFEERQVGDERYNLFTGCPRSRTATIVLRGGSEQFIDETHRSVHDALCIVKRAMRSGEVVAGGGAIEMEVSKFVREQARSIEGKEQLIMNGMARALEVIPRQLSDNAGFDATEVLNQLRMKHAK-GTAGKWYGVDVDVEGITDTFESGVWEPAANKMNSFAAASEAACVILSIDETVRNPRSEQPGAADANGVGLGAGAGGRGGRRGKPVSAAMGGGGMAGMMXXXRRGGPRGVRAFRGRGGA 619

[Close]

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A6H5JXK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK9_9PHAE)

HSP 1 Score: 774 bits (1999), Expect = 5.870e-279
Identity = 407/425 (95.76%), Postives = 418/425 (98.35%), Query Frame = 0

Query:  156 VRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 580
            +RCAGTALNSKLISSQK+LFAPMVVEAVSNLDQQLL LSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSF+NPGVLLLNVELELKSEKESAEVRISDPD+YQEIVDAEW+IIYDKL+KCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGIT +V+GHCE+FEETQLGNERWNLFTGCPEARTATI+LRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHAR G+AGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQ    GAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA
Sbjct:    1 MRCAGTALNSKLISSQKNLFAPMVVEAVSNLDQQLLDLSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWNIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARGGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQ----GAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 421

[Close]

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A7S2V255_9STRA (T-complex protein 1 subunit eta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V255_9STRA)

HSP 1 Score: 772 bits (1993), Expect = 1.820e-275
Identity = 397/586 (67.75%), Postives = 478/586 (81.57%), Query Frame = 0

Query:    1 MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAE-VLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAP-SQGVGLGRGGPISAGMGXXXXXXXXXXX-GRGQRP---GVKMMKGRGGA 580
            MSYM +PGIILLREGTD+SQGKAQLVSNINACQA+ D +R+TLGPRGMDKL+FDG+ VT+SNDGATIMKLLD+ HPAAK LVDIS+SQDAEVGDGTTSVVLLA  +L  VK  +ED +HPQ++ RG+R A   A   L+ +S+   +   A  +L++CAGTALNSKLI++QK LFAPMVVE +  LD QLL LSL+G+KKV GGSVTDSFLV+GVAF+KTFSYAGFEQQPKSF +P +LLLNVELELKSEKE+AEVRI+DPD YQ IVDAEW+IIY+KL+ CV SGA+IILS+LP+GDLATQ+FADR LFCAGRV Q+DMERVAKATG  +QTS+ G++ E V G C  FEE Q+G +R N+F  CP ARTAT+ILRGG+EQF+EE+ RSIHD+LMIVKR L    VV GGGA+E ELSK L+  + TI+GKQQL+ +++AKALE++P QLA NAGFD+TDLLN+LRQ HA+   AGKW GVDV+TEG+ DTFE+G+WEPTINKRN+L +A EAACL+LS+DETV+NP+S+  GAP SQGVGL    P+SAGMG            GRG+R    GVK  +GRGGA
Sbjct:    1 MSYMMKPGIILLREGTDTSQGKAQLVSNINACQAIADAIRTTLGPRGMDKLVFDGRNVTVSNDGATIMKLLDVVHPAAKMLVDISLSQDAEVGDGTTSVVLLAASLLSQVKTHIEDNMHPQVVVRGVRAAALEAQKLLEGMSVS-FEGADADQMLLKCAGTALNSKLIAAQKGLFAPMVVECIKYLDPQLLDLSLVGIKKVQGGSVTDSFLVQGVAFQKTFSYAGFEQQPKSFTDPKILLLNVELELKSEKENAEVRITDPDQYQSIVDAEWTIIYEKLENCVESGAQIILSRLPIGDLATQYFADRGLFCAGRVPQEDMERVAKATGAVMQTSVFGLSEEGVTGTCGIFEEVQVGGDRMNIFKDCPSARTATMILRGGAEQFLEETERSIHDALMIVKRSLAVGSVVGGGGAVECELSKLLKQKANTIQGKQQLVFTAFAKALEVVPYQLASNAGFDSTDLLNKLRQAHAK-SSAGKWMGVDVETEGITDTFEAGIWEPTINKRNALMAAAEAACLVLSVDETVRNPRSQAPGAPDSQGVGLA---PVSAGMGGQGMAGMVSRGRGRGRRGMPRGVKAFRGRGGA 581

[Close]

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A485KV81_9STRA (CCT-eta n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KV81_9STRA)

HSP 1 Score: 768 bits (1983), Expect = 1.200e-273
Identity = 394/579 (68.05%), Postives = 480/579 (82.90%), Query Frame = 0

Query:    5 NQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLD--AVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGG-PISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 580
            +QP IILL+EGTD+SQGK+QL+SNINACQA+M++VR+TLGPRGMDKLI  G K TISNDGATIM LLDI HPAAKTLVDIS+SQDAEVGDGTTSVVLL GE+L+  K FVE+ +HPQ I +  RKAC +AV ++    V +  TD    +++L R AGTALNSKLISSQK  F+PMVV+A+ +LD  +  +S++GVKKV GGSVTDSFLVKGVAFKKTFSYAGFEQ PK F+NP +LLLNVELELKSEKE+AEVRI DP  YQ IVDAEW+IIYDKL+KCV SGA+IILSKLP+GDLATQ+FADR LFCAGRVAQDDMER  +ATGG +QTS+  +T ++LG C KFEE Q GNER+NLFT CP++++ TI+LRGG+EQF+EE+HRS+HD+LM+VKR +    VVAGGGAIEME+S+ LR++S+T++GK QL++++YAKA EIIPRQL+DNAG D+TD+LNRLRQKH +D E GKWFGVD++T G+CDTFES VWEP  NK NS+ +ATEAACLILS+DETV+NP+SE+   P  G+G G GG P+SA MG     XXXXXX  G   GV+  +G+GGA
Sbjct:   26 DQPQIILLKEGTDTSQGKSQLISNINACQAIMESVRTTLGPRGMDKLIHKGSKTTISNDGATIMGLLDIVHPAAKTLVDISLSQDAEVGDGTTSVVLLGGELLRQAKPFVEENMHPQTIIKSYRKACTLAVQKIRDIMVHVAETDSVAYRNMLERVAGTALNSKLISSQKKFFSPMVVDAILSLDTDM-DISMVGVKKVPGGSVTDSFLVKGVAFKKTFSYAGFEQMPKYFKNPKILLLNVELELKSEKENAEVRIDDPSQYQSIVDAEWNIIYDKLEKCVKSGAQIILSKLPIGDLATQYFADRGLFCAGRVAQDDMERTMRATGGAIQTSVQDMTDKILGTCGKFEEQQCGNERYNLFTDCPKSKSTTIVLRGGAEQFIEEAHRSVHDALMVVKRTVATSTVVAGGGAIEMEISRHLREYSRTVEGKAQLLINAYAKAFEIIPRQLSDNAGHDSTDILNRLRQKHFKDPETGKWFGVDINTGGICDTFESHVWEPAANKINSVAAATEAACLILSVDETVRNPKSEQ---PQGGMGGGPGGAPMSAAMGGQGMKXXXXXXXGGLGKGVRAFRGKGGA 600

[Close]

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A7S2CM60_9STRA (T-complex protein 1 subunit eta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CM60_9STRA)

HSP 1 Score: 758 bits (1958), Expect = 2.940e-270
Identity = 380/535 (71.03%), Postives = 454/535 (84.86%), Query Frame = 0

Query:    6 QPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLA-LSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGV 539
            QPGIILLREGTD SQGKAQL+SNINACQAV DTVR+TLGPRGMDKL+FDGQ+VTISNDGATIMKLLDI HPAAKTLVDISMSQDAEVGDGTTSVVLLAGE+LK +K FVE+GLHPQII  GLRKA +VAVARL  +++        +D+L   AGTALNSKLIS+QK LF PM+V+AVS LD +    L ++G+KKV GG VT SFLV+GVAFKK FSYAGFE   K + NP +L+LNVELELKSEKE+AEVRI+DP  YQ IVDAEW IIY+KLDKCV SGA+IILSKLP+GDLATQ+FADRNLFCAGRV   D++RVA+ATGG +Q++++ +T ++LG C +FEE Q+G ER+N+FT C  A+TATI+LRGGSEQF+EESHRSIHD+LMIVKR L +  VVAGGGAIEME+SK+LR+++KTI GKQQLI+S++AKALE++PRQL +NAGFDAT +LN LRQ HA  G+ G+W GVD+DTEG+C+T ESGVWEP +NK NS  +A EAAC+ILSIDETV+NPQSE+ G  + G+
Sbjct:    8 QPGIILLREGTDQSQGKAQLISNINACQAVADTVRTTLGPRGMDKLVFDGQRVTISNDGATIMKLLDIVHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEVLKQIKPFVEEGLHPQIIMGGLRKAAQVAVARLKEIAVD-IGAAGNRDMLETFAGTALNSKLISNQKSLFCPMIVDAVSILDMEPAPDLDMVGIKKVPGGDVTQSFLVEGVAFKKAFSYAGFEMMQKQYTNPKILILNVELELKSEKENAEVRITDPGDYQSIVDAEWQIIYEKLDKCVDSGAQIILSKLPIGDLATQYFADRNLFCAGRVDASDLKRVAQATGGHMQSTVNDLTPDILGECGEFEERQVGEERYNVFTKCTNAKTATIVLRGGSEQFIEESHRSIHDALMIVKRGLMSARVVAGGGAIEMEVSKSLREYAKTIMGKQQLIISAFAKALEVVPRQLCENAGFDATTVLNELRQSHALAGDVGRWSGVDMDTEGICNTMESGVWEPAVNKINSYTAAAEAACVILSIDETVRNPQSEQPGGAAGGM 541

[Close]

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A5D6XQ58_9STRA (CCT-eta n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ58_9STRA)

HSP 1 Score: 742 bits (1916), Expect = 7.890e-264
Identity = 385/580 (66.38%), Postives = 477/580 (82.24%), Query Frame = 0

Query:    4 MNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQA--KDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRP-GVKMMKGRGGA 580
            M QP IILL+EGTD+SQGKAQL+SNINACQAVM+ VR+TLGPRGMDKLI  G K TISNDGATIM LLD+ HPAAKTLVDIS+SQDAEVGDGTTSVVLL  E L+  K F+E+ +HPQ+I +  RKA ++AV ++  + ++  D +    + +L R AGTALNSKLIS  K  F+PM+V+AV +LD+    ++++GVKKV GGSVTDSFLV GVAFKKTFSYAGFEQQ K+F +P +LLLNVELELKSEKE+AEVRI DPD YQ IVDAEW+IIY+KL+ CV SGA+IILSKLP+GDLATQ+FADR LFCAGRVAQDDMER  +ATGG VQTS+H +T  VLG C +FEE Q+G ER+N+F  C +A++ATI+LRGG+EQF+EE+HRS+HD+LM+VKR + +  VVAGGGAIEME+S+ LR +++TI+GK QL++++YAKA E+IPRQ+ADNAG D+TD+LNRLRQKH +D + GKWFGVD+++ G+CDT+E+ VWEP  NK NS+ +ATEAACLILS+DETV+NP+SE+   P  G G G G P+SA MGXXXXXXXXXXX  G    GV+  +GRGGA
Sbjct:    2 MMQPQIILLKEGTDTSQGKAQLISNINACQAVMEAVRTTLGPRGMDKLIHAGNKTTISNDGATIMNLLDVVHPAAKTLVDISLSQDAEVGDGTTSVVLLGAEFLRQAKPFIEENMHPQLIMKSYRKAGQIAVQKVKEIQVRVADSDVVGRRQMLERVAGTALNSKLISRHKAFFSPMIVDAVLSLDEDQ-DITMVGVKKVQGGSVTDSFLVNGVAFKKTFSYAGFEQQQKTFTSPKILLLNVELELKSEKENAEVRIEDPDQYQSIVDAEWNIIYEKLELCVQSGAQIILSKLPIGDLATQYFADRGLFCAGRVAQDDMERTQRATGGVVQTSVHDMTPSVLGTCGRFEERQVGGERFNIFMDCSQAKSATIVLRGGAEQFIEEAHRSVHDALMVVKRTVASAAVVAGGGAIEMEVSRHLRQYARTIEGKAQLLVNAYAKAFEVIPRQIADNAGHDSTDILNRLRQKHFKDPDEGKWFGVDINSGGICDTYEAHVWEPAANKINSIAAATEAACLILSVDETVRNPKSEQ---PQGGPGQGGGAPMSAAMGXXXXXXXXXXXXXGGLGRGVRAFRGRGGA 577

[Close]

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: F0WUC7_9STRA (CCT-eta n=5 Tax=Albugo TaxID=65356 RepID=F0WUC7_9STRA)

HSP 1 Score: 740 bits (1911), Expect = 4.070e-263
Identity = 371/580 (63.97%), Postives = 467/580 (80.52%), Query Frame = 0

Query:    4 MNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLD--AVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXG-RGQRPGVKMMKGRGGA 580
            M QP IILL+EGTD+SQGKAQL+SNINACQA+M++VR+TLGP GMDKLI    K TISNDGATIM LLD+ HPAAKTLVDIS+SQDAEVGDGTTSVVLL  E L+  K F+ED +HPQ I +  RKAC++AV R+   AV I  TD+   + +L R AGTALNSKLI+  K  F PM+V+AV +LD+ L  +S++G+KKV GGSVT+SFLV+GVAFKKTFSYAGFEQQPK+F NP +LLLNVELELKSEKE+AE+RI DP+ YQ IVDAEW+IIYDKLD CV SGA+IILSKLPVGDLATQ+FADR LFCAGRVAQDDMER  +ATGG +QTS++ +T+ +LG C +FEE Q+G ER+N+F  CP+A++ATI+LRGG++QF+EE+HRS+HD+LM+VKR + +  +V GGGAIEME+S+ L  H++TI+GK QL++++YAKA EIIPRQ++DNAG D+T +LN+LRQ H++D + GKW+GVD+++ GVCDT++S VWEP  NK NS+ +ATEAACLILS+DETV+NP+SE+  A       G G P+SA MG           G RG   GV+  +G+GGA
Sbjct:    2 MMQPQIILLKEGTDTSQGKAQLISNINACQAIMESVRTTLGPLGMDKLIHANNKTTISNDGATIMTLLDVVHPAAKTLVDISLSQDAEVGDGTTSVVLLGAEFLRQSKSFIEDNMHPQTIIKSYRKACQLAVQRIKDIAVRIDETDEVSKRQMLERVAGTALNSKLIARHKPFFTPMIVDAVLSLDKDL-NISMVGIKKVSGGSVTESFLVQGVAFKKTFSYAGFEQQPKTFVNPKILLLNVELELKSEKENAEIRIDDPEKYQSIVDAEWNIIYDKLDLCVKSGAQIILSKLPVGDLATQYFADRGLFCAGRVAQDDMERTLRATGGVLQTSVNDMTSSILGSCGRFEERQVGGERYNIFMECPQAKSATIVLRGGADQFIEEAHRSVHDALMVVKRAVSSFTIVPGGGAIEMEISRHLHRHARTIEGKMQLLINAYAKAFEIIPRQISDNAGHDSTGILNQLRQMHSKDSDEGKWYGVDINSGGVCDTYKSHVWEPAANKINSIAAATEAACLILSVDETVRNPKSEQPQA------TGGGQPMSAAMGGQGMAGMGMAPGGRGLGRGVRAFRGKGGA 574

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G400_ECTSI	0.000e+0	97.24	CCT-eta n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
A0A836CEV1_9STRA	7.070e-313	75.43	T-complex protein 1 subunit eta n=1 Tax=Tribonema ...	[more]
A0A7R9UFR0_9STRA	6.340e-286	69.35	CCT-eta n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1...	[more]
A0A7S1U8Z7_9STRA	3.160e-283	68.64	CCT-eta n=2 Tax=Phaeomonas parva TaxID=124430 RepI...	[more]
A0A6H5JXK9_9PHAE	5.870e-279	95.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2V255_9STRA	1.820e-275	67.75	T-complex protein 1 subunit eta n=1 Tax=Fibrocapsa...	[more]
A0A485KV81_9STRA	1.200e-273	68.05	CCT-eta n=17 Tax=Saprolegniaceae TaxID=4764 RepID=...	[more]
A0A7S2CM60_9STRA	2.940e-270	71.03	T-complex protein 1 subunit eta n=1 Tax=Florenciel...	[more]
A0A5D6XQ58_9STRA	7.890e-264	66.38	CCT-eta n=1 Tax=Pythium brassicum TaxID=1485010 Re...	[more]
F0WUC7_9STRA	4.070e-263	63.97	CCT-eta n=5 Tax=Albugo TaxID=65356 RepID=F0WUC7_9S...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 372..394 score: 31.55 coord: 37..53 score: 45.9 coord: 58..76 score: 37.49 coord: 406..418 score: 45.52 coord: 88..107 score: 50.41
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PANTHER	PTHR11353	CHAPERONIN	coord: 4..539
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10	GroEL	coord: 213..368 e-value: 2.8E-174 score: 582.6
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 208..377
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 32..524 e-value: 2.8E-174 score: 582.6
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 18..526
IPR002423	Chaperonin Cpn60/GroEL/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 36..526 e-value: 1.4E-155 score: 518.7
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 144..404 e-value: 2.8E-174 score: 582.6
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	SUPERFAMILY	54849	GroEL-intermediate domain like	coord: 150..403
IPR012720	T-complex protein 1, eta subunit	TIGRFAM	TIGR02345	TIGR02345	coord: 7..529 e-value: 1.7E-251 score: 833.0
IPR012720	T-complex protein 1, eta subunit	CDD	cd03340	TCP1_eta	coord: 9..529 e-value: 0.0 score: 930.545
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 526..547
None	No IPR available	PANTHER	PTHR11353:SF211	T-COMPLEX PROTEIN 1 SUBUNIT ETA	coord: 4..539
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00751	TCP1_2	coord: 60..76
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00750	TCP1_1	coord: 40..52
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00995	TCP1_3	coord: 88..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig850	contig	P-littoralis_Contig850:41085..52591 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig850.17.1	mRNA_P-littoralis_Contig850.17.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig850 40239..56352 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig850.17.1 ID=prot_P-littoralis_Contig850.17.1|Name=mRNA_P-littoralis_Contig850.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=581bp
MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDK
LIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVV
LLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQ
AKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKK
VGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSE
KESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLA
TQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFE
ETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRC
LKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQL
ADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPT
INKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAG
MGGQGMAGMMGGGGRGQRPGVKMMKGRGGA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017998	Chaperone_TCP-1
IPR027409	GroEL-like_apical_dom_sf
IPR027413	GROEL-like_equatorial_sf
IPR002423	Cpn60/GroEL/TCP-1
IPR027410	TCP-1-like_intermed_sf
IPR012720	Chap_CCT_eta
IPR002194	Chaperonin_TCP-1_CS