mRNA_P-littoralis_Contig850.17.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig850.17.1
Unique Name	mRNA_P-littoralis_Contig850.17.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: D7G400_ECTSI (CCT-eta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G400_ECTSI)

HSP 1 Score: 1088 bits (2815), Expect = 0.000e+0
Identity = 564/580 (97.24%), Postives = 576/580 (99.31%), Query Frame = 3

Query:  162 MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 1901
            MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQ+ICRGLRKACEVAV RLDAVS+KPTDD QAKDVL+RCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLL LSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSF+NPGVLLLNVELELKSEKESAEVRISDPD+YQEIVDAEW+IIYDKL+KCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITA+V+GHCE+FEETQLGNERWNLFTGCPEARTATI+LRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHAR G+AGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA
Sbjct:    1 MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQVICRGLRKACEVAVGRLDAVSVKPTDDAQAKDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLDLSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWNIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITADVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARGGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 580

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BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A836CEV1_9STRA (T-complex protein 1 subunit eta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEV1_9STRA)

HSP 1 Score: 868 bits (2242), Expect = 6.200e-308
Identity = 439/582 (75.43%), Postives = 510/582 (87.63%), Query Frame = 3

Query:  162 MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGG-PISAGMGXXXXXXXXXXXGRGQRP-GVKMMKGRGGA 1901
            MS+M QPGIILLREGTD SQGKAQL+SNINACQAV+D VR+TLGPRGMDKLIFDG+KVTISNDGATIMKLLDIAHPAAK LVD+S+SQDAEVGDGTT+VVLL+GE+LKHVKGF+EDG++PQ+I RGLR+A +VA+ARL+A+S+K TDD  A+ VL +CAGTALNSKLI+SQ+ LFAPM+VEAVS LD +L  + ++G+KKV GGSVTDSFLV+GVAFKKTFSYAGFEQQPK FENP +LLL+VELELKSEKE+AEVRISDPD YQ IVDAEWSIIY+KLD CVA+GA+IILSKLP+GDLATQ+FADR LFCAGRV  +DMER+++ATGG+VQ++  GI A VLG CEKFEE QLG ER+NLFTGCP+ARTATI+LRGGSEQF+EES RS+HD+LM+VKR LK  EVVAGGGAIEMELSKALR+ S+ I GK+QL+M + AKALEI+PRQL++NAG D+TD+LNRLR  HA+ G+ G+W GV VD E VCDT   GVWEPTINKRN+LRSA EAACLILSIDETV+NPQSE+ GAPSQGVGLGRGG PISAGMG           GRG+ P GV+ MKGR GA
Sbjct:    1 MSHMLQPGIILLREGTDQSQGKAQLISNINACQAVVDAVRTTLGPRGMDKLIFDGRKVTISNDGATIMKLLDIAHPAAKVLVDVSVSQDAEVGDGTTTVVLLSGEVLKHVKGFIEDGVNPQVIIRGLRRAGDVAIARLNALSVKATDDASARAVLEKCAGTALNSKLIASQRGLFAPMIVEAVSLLDARLADVKMVGIKKVPGGSVTDSFLVRGVAFKKTFSYAGFEQQPKHFENPKILLLSVELELKSEKENAEVRISDPDAYQAIVDAEWSIIYEKLDACVAAGAQIILSKLPIGDLATQYFADRQLFCAGRVEPEDMERISRATGGRVQSTTSGIEASVLGTCEKFEEVQLGEERFNLFTGCPKARTATIVLRGGSEQFLEESQRSMHDALMVVKRSLKACEVVAGGGAIEMELSKALREASRAISGKEQLVMGAVAKALEIVPRQLSENAGLDSTDVLNRLRHAHAQPGDGGRWIGVSVDEEDVCDTMAKGVWEPTINKRNALRSAIEAACLILSIDETVRNPQSEQPGAPSQGVGLGRGGQPISAGMGGMGMAGMMGA-GRGKLPRGVRAMKGRAGA 581

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BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A7R9UFR0_9STRA (CCT-eta n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFR0_9STRA)

HSP 1 Score: 800 bits (2065), Expect = 4.490e-281
Identity = 405/584 (69.35%), Postives = 484/584 (82.88%), Query Frame = 3

Query:  162 MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAP-SQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQR---PGVKMMKGRGGA 1901
            MS M QPGIILLREGTD+SQGKAQ++SNINAC AV +T+++TLGPRGMDKLIFDG+KVTISNDGATIM+LLD+ HPAAKTLVDISMSQDAEVGDGTTSVVL+A  IL  +K FVEDGLHPQII RG+RKA  +AV R+  +++     ++A+ +LV CAGTALNSKLIS+ KD+FAPMVV+AVS LD QLL L L+G+KKV GGSV  SFLV+GVAFKKTFSYAGFEQQPK F +P +LLLNVELELKSEKE+AE+RI+DPD YQ IVDAEW IIYDKL+ CVASGAKIILSKLP+GDLATQ+FADR+LFCAGRV  +DM RVAKATGG VQ + H I    LGHC+ FEE Q+G+ER+NLFTGCP +RTATI+LRGGSEQF++E+HRSIHD+L IVKR +++ EVVAGGGAIEME+SK +R+ ++ I+GK+QLIM+S A+ALE+IPRQLADNAGFDAT++LN LR KHA+D E G+W+GV+VD EG+ DTF+S VWEP  NK NS  +A+EAACLILSIDETV+NP++E+ GA  + GVGLG GG    G             G G+R    GV+  KGRGGA
Sbjct:    1 MSMMMQPGIILLREGTDTSQGKAQIISNINACAAVAETIKTTLGPRGMDKLIFDGRKVTISNDGATIMRLLDVVHPAAKTLVDISMSQDAEVGDGTTSVVLIAASILDEMKSFVEDGLHPQIIIRGIRKAANLAVQRVKDLAVSMRGGDEARQLLVTCAGTALNSKLISNHKDMFAPMVVDAVSMLDPQLLDLDLVGIKKVSGGSVRQSFLVEGVAFKKTFSYAGFEQQPKKFSDPDILLLNVELELKSEKENAEIRITDPDQYQSIVDAEWRIIYDKLEACVASGAKIILSKLPIGDLATQYFADRDLFCAGRVTNEDMMRVAKATGGVVQCTCHDIQTSALGHCQHFEERQVGDERYNLFTGCPRSRTATIVLRGGSEQFIDETHRSIHDALCIVKRAMRSGEVVAGGGAIEMEVSKFVREEARKIEGKEQLIMNSMARALEVIPRQLADNAGFDATEVLNNLRMKHAKD-EKGRWYGVNVDVEGITDTFQSNVWEPAPNKVNSFAAASEAACLILSIDETVRNPRTEQPGAADANGVGLGPGGGGMGGRRGKAPGGMPPMGGGGRRGMPKGVRAFKGRGGA 583

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BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A7S1U8Z7_9STRA (CCT-eta n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8Z7_9STRA)

HSP 1 Score: 795 bits (2054), Expect = 7.730e-279
Identity = 406/594 (68.35%), Postives = 491/594 (82.66%), Query Frame = 3

Query:  150 TTTTMSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAP-SQGVGLG---------RGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 1901
            T   MS+M QPGIILLREGTD+SQGKAQ+VSNINAC AV +T+++TLGPRGMDKLIFDG+KVTISNDGATIM+LLD+ HPAAKTLVDISMSQDAEVGDGTTSVVL+A  IL  +K FV+DGLHPQII RG+R+A  +AV R+  + +     E+A+ +L  CAGTALNSKLIS  +DLFAPMVV+AVS LD +LL L+L+G+KKV GGSV  SFLV+GVAFKKTFSYAGFEQQPKSF NP +LLLNVELELK+EKE+AEVRI+DPD YQ IVD EW IIYDKL+ CVASGAKIILSKLP+GDLATQ+FADR++FCAGRVA +D+ RV KATG  +Q + H I    LG C++FEE Q+G+ER+NLFTGCP +RTATI+LRGGSEQF++E+HRS+HD+L IVKR +++ EVVAGGGAIEME+SK +R+ +++I+GK+QLIM+  A+ALE+IPRQL+DNAGFDAT++LN+LR KHA+ G AGKW+GVDVD EG+ DTFESGVWEP  NK NS  +A+EAAC+ILSIDETV+NP+SE+ GA  + GVGLG         RG P+SA MG        XXX RG   GV+  +GRGGA
Sbjct:   27 TRAKMSHMMQPGIILLREGTDTSQGKAQIVSNINACAAVAETIKTTLGPRGMDKLIFDGRKVTISNDGATIMRLLDVVHPAAKTLVDISMSQDAEVGDGTTSVVLIAASILNEMKHFVDDGLHPQIIIRGIRRAANLAVDRVRELGVAMHSTEEARKLLETCAGTALNSKLISHHQDLFAPMVVDAVSMLDPELLDLNLVGIKKVPGGSVRQSFLVEGVAFKKTFSYAGFEQQPKSFSNPEILLLNVELELKAEKENAEVRITDPDQYQSIVDTEWRIIYDKLEACVASGAKIILSKLPIGDLATQYFADRDIFCAGRVANEDVLRVQKATGAVMQCTCHDINKSDLGRCDRFEERQVGDERYNLFTGCPRSRTATIVLRGGSEQFIDETHRSVHDALCIVKRAMRSGEVVAGGGAIEMEVSKFVREQARSIEGKEQLIMNGMARALEVIPRQLSDNAGFDATEVLNQLRMKHAK-GTAGKWYGVDVDVEGITDTFESGVWEPAANKMNSFAAASEAACVILSIDETVRNPRSEQPGAADANGVGLGAGAGGRGGRRGKPVSAAMGGGGMAGMMXXXRRGGPRGVRAFRGRGGA 619

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BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A6H5JXK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK9_9PHAE)

HSP 1 Score: 775 bits (2000), Expect = 7.670e-274
Identity = 407/425 (95.76%), Postives = 418/425 (98.35%), Query Frame = 3

Query:  627 VRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 1901
            +RCAGTALNSKLISSQK+LFAPMVVEAVSNLDQQLL LSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSF+NPGVLLLNVELELKSEKESAEVRISDPD+YQEIVDAEW+IIYDKL+KCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGIT +V+GHCE+FEETQLGNERWNLFTGCPEARTATI+LRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHAR G+AGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQ    GAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA
Sbjct:    1 MRCAGTALNSKLISSQKNLFAPMVVEAVSNLDQQLLDLSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWNIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARGGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQ----GAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 421

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BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A7S2V255_9STRA (T-complex protein 1 subunit eta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V255_9STRA)

HSP 1 Score: 773 bits (1996), Expect = 1.170e-270
Identity = 397/586 (67.75%), Postives = 478/586 (81.57%), Query Frame = 3

Query:  162 MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAE-VLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAP-SQGVGLGRGGPISAGMGXXXXXXXXXXX-GRGQRP---GVKMMKGRGGA 1901
            MSYM +PGIILLREGTD+SQGKAQLVSNINACQA+ D +R+TLGPRGMDKL+FDG+ VT+SNDGATIMKLLD+ HPAAK LVDIS+SQDAEVGDGTTSVVLLA  +L  VK  +ED +HPQ++ RG+R A   A   L+ +S+   +   A  +L++CAGTALNSKLI++QK LFAPMVVE +  LD QLL LSL+G+KKV GGSVTDSFLV+GVAF+KTFSYAGFEQQPKSF +P +LLLNVELELKSEKE+AEVRI+DPD YQ IVDAEW+IIY+KL+ CV SGA+IILS+LP+GDLATQ+FADR LFCAGRV Q+DMERVAKATG  +QTS+ G++ E V G C  FEE Q+G +R N+F  CP ARTAT+ILRGG+EQF+EE+ RSIHD+LMIVKR L    VV GGGA+E ELSK L+  + TI+GKQQL+ +++AKALE++P QLA NAGFD+TDLLN+LRQ HA+   AGKW GVDV+TEG+ DTFE+G+WEPTINKRN+L +A EAACL+LS+DETV+NP+S+  GAP SQGVGL    P+SAGMG            GRG+R    GVK  +GRGGA
Sbjct:    1 MSYMMKPGIILLREGTDTSQGKAQLVSNINACQAIADAIRTTLGPRGMDKLVFDGRNVTVSNDGATIMKLLDVVHPAAKMLVDISLSQDAEVGDGTTSVVLLAASLLSQVKTHIEDNMHPQVVVRGVRAAALEAQKLLEGMSVS-FEGADADQMLLKCAGTALNSKLIAAQKGLFAPMVVECIKYLDPQLLDLSLVGIKKVQGGSVTDSFLVQGVAFQKTFSYAGFEQQPKSFTDPKILLLNVELELKSEKENAEVRITDPDQYQSIVDAEWTIIYEKLENCVESGAQIILSRLPIGDLATQYFADRGLFCAGRVPQEDMERVAKATGAVMQTSVFGLSEEGVTGTCGIFEEVQVGGDRMNIFKDCPSARTATMILRGGAEQFLEETERSIHDALMIVKRSLAVGSVVGGGGAVECELSKLLKQKANTIQGKQQLVFTAFAKALEVVPYQLASNAGFDSTDLLNKLRQAHAK-SSAGKWMGVDVETEGITDTFEAGIWEPTINKRNALMAAAEAACLVLSVDETVRNPRSQAPGAPDSQGVGLA---PVSAGMGGQGMAGMVSRGRGRGRRGMPRGVKAFRGRGGA 581

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BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A485KV81_9STRA (CCT-eta n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KV81_9STRA)

HSP 1 Score: 769 bits (1987), Expect = 5.380e-269
Identity = 397/589 (67.40%), Postives = 484/589 (82.17%), Query Frame = 3

Query:  144 DGTTTTMSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLD--AVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGG-PISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 1901
            +G    MS  +QP IILL+EGTD+SQGK+QL+SNINACQA+M++VR+TLGPRGMDKLI  G K TISNDGATIM LLDI HPAAKTLVDIS+SQDAEVGDGTTSVVLL GE+L+  K FVE+ +HPQ I +  RKAC +AV ++    V +  TD    +++L R AGTALNSKLISSQK  F+PMVV+A+ +LD  +  +S++GVKKV GGSVTDSFLVKGVAFKKTFSYAGFEQ PK F+NP +LLLNVELELKSEKE+AEVRI DP  YQ IVDAEW+IIYDKL+KCV SGA+IILSKLP+GDLATQ+FADR LFCAGRVAQDDMER  +ATGG +QTS+  +T ++LG C KFEE Q GNER+NLFT CP++++ TI+LRGG+EQF+EE+HRS+HD+LM+VKR +    VVAGGGAIEME+S+ LR++S+T++GK QL++++YAKA EIIPRQL+DNAG D+TD+LNRLRQKH +D E GKWFGVD++T G+CDTFES VWEP  NK NS+ +ATEAACLILS+DETV+NP+SE+   P  G+G G GG P+SA MG     XXXXXX  G   GV+  +G+GGA
Sbjct:   17 EGAPQPMSE-DQPQIILLKEGTDTSQGKSQLISNINACQAIMESVRTTLGPRGMDKLIHKGSKTTISNDGATIMGLLDIVHPAAKTLVDISLSQDAEVGDGTTSVVLLGGELLRQAKPFVEENMHPQTIIKSYRKACTLAVQKIRDIMVHVAETDSVAYRNMLERVAGTALNSKLISSQKKFFSPMVVDAILSLDTDM-DISMVGVKKVPGGSVTDSFLVKGVAFKKTFSYAGFEQMPKYFKNPKILLLNVELELKSEKENAEVRIDDPSQYQSIVDAEWNIIYDKLEKCVKSGAQIILSKLPIGDLATQYFADRGLFCAGRVAQDDMERTMRATGGAIQTSVQDMTDKILGTCGKFEEQQCGNERYNLFTDCPKSKSTTIVLRGGAEQFIEEAHRSVHDALMVVKRTVATSTVVAGGGAIEMEISRHLREYSRTVEGKAQLLINAYAKAFEIIPRQLSDNAGHDSTDILNRLRQKHFKDPETGKWFGVDINTGGICDTFESHVWEPAANKINSVAAATEAACLILSVDETVRNPKSEQ---PQGGMGGGPGGAPMSAAMGGQGMKXXXXXXXGGLGKGVRAFRGKGGA 600

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BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A7S2CM60_9STRA (T-complex protein 1 subunit eta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CM60_9STRA)

HSP 1 Score: 759 bits (1960), Expect = 2.550e-265
Identity = 380/535 (71.03%), Postives = 454/535 (84.86%), Query Frame = 3

Query:  177 QPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLA-LSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGV 1778
            QPGIILLREGTD SQGKAQL+SNINACQAV DTVR+TLGPRGMDKL+FDGQ+VTISNDGATIMKLLDI HPAAKTLVDISMSQDAEVGDGTTSVVLLAGE+LK +K FVE+GLHPQII  GLRKA +VAVARL  +++        +D+L   AGTALNSKLIS+QK LF PM+V+AVS LD +    L ++G+KKV GG VT SFLV+GVAFKK FSYAGFE   K + NP +L+LNVELELKSEKE+AEVRI+DP  YQ IVDAEW IIY+KLDKCV SGA+IILSKLP+GDLATQ+FADRNLFCAGRV   D++RVA+ATGG +Q++++ +T ++LG C +FEE Q+G ER+N+FT C  A+TATI+LRGGSEQF+EESHRSIHD+LMIVKR L +  VVAGGGAIEME+SK+LR+++KTI GKQQLI+S++AKALE++PRQL +NAGFDAT +LN LRQ HA  G+ G+W GVD+DTEG+C+T ESGVWEP +NK NS  +A EAAC+ILSIDETV+NPQSE+ G  + G+
Sbjct:    8 QPGIILLREGTDQSQGKAQLISNINACQAVADTVRTTLGPRGMDKLVFDGQRVTISNDGATIMKLLDIVHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEVLKQIKPFVEEGLHPQIIMGGLRKAAQVAVARLKEIAVD-IGAAGNRDMLETFAGTALNSKLISNQKSLFCPMIVDAVSILDMEPAPDLDMVGIKKVPGGDVTQSFLVEGVAFKKAFSYAGFEMMQKQYTNPKILILNVELELKSEKENAEVRITDPGDYQSIVDAEWQIIYEKLDKCVDSGAQIILSKLPIGDLATQYFADRNLFCAGRVDASDLKRVAQATGGHMQSTVNDLTPDILGECGEFEERQVGEERYNVFTKCTNAKTATIVLRGGSEQFIEESHRSIHDALMIVKRGLMSARVVAGGGAIEMEVSKSLREYAKTIMGKQQLIISAFAKALEVVPRQLCENAGFDATTVLNELRQSHALAGDVGRWSGVDMDTEGICNTMESGVWEPAVNKINSYTAAAEAACVILSIDETVRNPQSEQPGGAAGGM 541

[Close]

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: A0A5D6XQ58_9STRA (CCT-eta n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ58_9STRA)

HSP 1 Score: 743 bits (1919), Expect = 4.550e-259
Identity = 385/580 (66.38%), Postives = 477/580 (82.24%), Query Frame = 3

Query:  171 MNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQA--KDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXGRGQRP-GVKMMKGRGGA 1901
            M QP IILL+EGTD+SQGKAQL+SNINACQAVM+ VR+TLGPRGMDKLI  G K TISNDGATIM LLD+ HPAAKTLVDIS+SQDAEVGDGTTSVVLL  E L+  K F+E+ +HPQ+I +  RKA ++AV ++  + ++  D +    + +L R AGTALNSKLIS  K  F+PM+V+AV +LD+    ++++GVKKV GGSVTDSFLV GVAFKKTFSYAGFEQQ K+F +P +LLLNVELELKSEKE+AEVRI DPD YQ IVDAEW+IIY+KL+ CV SGA+IILSKLP+GDLATQ+FADR LFCAGRVAQDDMER  +ATGG VQTS+H +T  VLG C +FEE Q+G ER+N+F  C +A++ATI+LRGG+EQF+EE+HRS+HD+LM+VKR + +  VVAGGGAIEME+S+ LR +++TI+GK QL++++YAKA E+IPRQ+ADNAG D+TD+LNRLRQKH +D + GKWFGVD+++ G+CDT+E+ VWEP  NK NS+ +ATEAACLILS+DETV+NP+SE+   P  G G G G P+SA MGXXXXXXXXXXX  G    GV+  +GRGGA
Sbjct:    2 MMQPQIILLKEGTDTSQGKAQLISNINACQAVMEAVRTTLGPRGMDKLIHAGNKTTISNDGATIMNLLDVVHPAAKTLVDISLSQDAEVGDGTTSVVLLGAEFLRQAKPFIEENMHPQLIMKSYRKAGQIAVQKVKEIQVRVADSDVVGRRQMLERVAGTALNSKLISRHKAFFSPMIVDAVLSLDEDQ-DITMVGVKKVQGGSVTDSFLVNGVAFKKTFSYAGFEQQQKTFTSPKILLLNVELELKSEKENAEVRIEDPDQYQSIVDAEWNIIYEKLELCVQSGAQIILSKLPIGDLATQYFADRGLFCAGRVAQDDMERTQRATGGVVQTSVHDMTPSVLGTCGRFEERQVGGERFNIFMDCSQAKSATIVLRGGAEQFIEEAHRSVHDALMVVKRTVASAAVVAGGGAIEMEVSRHLRQYARTIEGKAQLLVNAYAKAFEVIPRQIADNAGHDSTDILNRLRQKHFKDPDEGKWFGVDINSGGICDTYEAHVWEPAANKINSIAAATEAACLILSVDETVRNPKSEQ---PQGGPGQGGGAPMSAAMGXXXXXXXXXXXXXGGLGRGVRAFRGRGGA 577

[Close]

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Match: F0WUC7_9STRA (CCT-eta n=5 Tax=Albugo TaxID=65356 RepID=F0WUC7_9STRA)

HSP 1 Score: 741 bits (1914), Expect = 2.330e-258
Identity = 371/580 (63.97%), Postives = 467/580 (80.52%), Query Frame = 3

Query:  171 MNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLD--AVSIKPTDDEQAKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSEKESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFEETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAGMGXXXXXXXXXXXG-RGQRPGVKMMKGRGGA 1901
            M QP IILL+EGTD+SQGKAQL+SNINACQA+M++VR+TLGP GMDKLI    K TISNDGATIM LLD+ HPAAKTLVDIS+SQDAEVGDGTTSVVLL  E L+  K F+ED +HPQ I +  RKAC++AV R+   AV I  TD+   + +L R AGTALNSKLI+  K  F PM+V+AV +LD+ L  +S++G+KKV GGSVT+SFLV+GVAFKKTFSYAGFEQQPK+F NP +LLLNVELELKSEKE+AE+RI DP+ YQ IVDAEW+IIYDKLD CV SGA+IILSKLPVGDLATQ+FADR LFCAGRVAQDDMER  +ATGG +QTS++ +T+ +LG C +FEE Q+G ER+N+F  CP+A++ATI+LRGG++QF+EE+HRS+HD+LM+VKR + +  +V GGGAIEME+S+ L  H++TI+GK QL++++YAKA EIIPRQ++DNAG D+T +LN+LRQ H++D + GKW+GVD+++ GVCDT++S VWEP  NK NS+ +ATEAACLILS+DETV+NP+SE+  A       G G P+SA MG           G RG   GV+  +G+GGA
Sbjct:    2 MMQPQIILLKEGTDTSQGKAQLISNINACQAIMESVRTTLGPLGMDKLIHANNKTTISNDGATIMTLLDVVHPAAKTLVDISLSQDAEVGDGTTSVVLLGAEFLRQSKSFIEDNMHPQTIIKSYRKACQLAVQRIKDIAVRIDETDEVSKRQMLERVAGTALNSKLIARHKPFFTPMIVDAVLSLDKDL-NISMVGIKKVSGGSVTESFLVQGVAFKKTFSYAGFEQQPKTFVNPKILLLNVELELKSEKENAEIRIDDPEKYQSIVDAEWNIIYDKLDLCVKSGAQIILSKLPVGDLATQYFADRGLFCAGRVAQDDMERTLRATGGVLQTSVNDMTSSILGSCGRFEERQVGGERYNIFMECPQAKSATIVLRGGADQFIEEAHRSVHDALMVVKRAVSSFTIVPGGGAIEMEISRHLHRHARTIEGKMQLLINAYAKAFEIIPRQISDNAGHDSTGILNQLRQMHSKDSDEGKWYGVDINSGGVCDTYKSHVWEPAANKINSIAAATEAACLILSVDETVRNPKSEQPQA------TGGGQPMSAAMGGQGMAGMGMAPGGRGLGRGVRAFRGKGGA 574

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig850.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G400_ECTSI	0.000e+0	97.24	CCT-eta n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
A0A836CEV1_9STRA	6.200e-308	75.43	T-complex protein 1 subunit eta n=1 Tax=Tribonema ...	[more]
A0A7R9UFR0_9STRA	4.490e-281	69.35	CCT-eta n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1...	[more]
A0A7S1U8Z7_9STRA	7.730e-279	68.35	CCT-eta n=2 Tax=Phaeomonas parva TaxID=124430 RepI...	[more]
A0A6H5JXK9_9PHAE	7.670e-274	95.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2V255_9STRA	1.170e-270	67.75	T-complex protein 1 subunit eta n=1 Tax=Fibrocapsa...	[more]
A0A485KV81_9STRA	5.380e-269	67.40	CCT-eta n=17 Tax=Saprolegniaceae TaxID=4764 RepID=...	[more]
A0A7S2CM60_9STRA	2.550e-265	71.03	T-complex protein 1 subunit eta n=1 Tax=Florenciel...	[more]
A0A5D6XQ58_9STRA	4.550e-259	66.38	CCT-eta n=1 Tax=Pythium brassicum TaxID=1485010 Re...	[more]
F0WUC7_9STRA	2.330e-258	63.97	CCT-eta n=5 Tax=Albugo TaxID=65356 RepID=F0WUC7_9S...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig850	contig	P-littoralis_Contig850:40239..56352 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7G400
Preferred name	CCT7
PFAMs	Cpn60_TCP1
Model size	2750
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K09499
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0002199,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005832,GO:0005856,GO:0005874,GO:0005886,GO:0006457,GO:0006458,GO:0006810,GO:0007338,GO:0007339,GO:0008037,GO:0008150,GO:0009566,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009988,GO:0010035,GO:0010038,GO:0010556,GO:0010557,GO:0010604,GO:0010638,GO:0015630,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019953,GO:0022414,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031647,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032879,GO:0032880,GO:0032991,GO:0033043,GO:0033044,GO:0035036,GO:0042221,GO:0042802,GO:0043209,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044183,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045935,GO:0046686,GO:0046931,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051052,GO:0051054,GO:0051082,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051704,GO:0060255,GO:0060341,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0070201,GO:0070202,GO:0070203,GO:0071840,GO:0071944,GO:0080090,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0101031,GO:1901998,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904951,GO:2000112,GO:2000278,GO:2000573,GO:2001252
Exons	16
Evalue	0.0
EggNOG OGs	COG0459@1\|root,KOG0361@2759\|Eukaryota
Ec32 ortholog description	Chaperone
Ec32 ortholog	Ec-19_000640.1
Description	protein binding involved in protein folding
Cds size	1743
COG category	O
BRITE	ko00000,ko03110,ko04147

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791720.6503007-UTR-P-littoralis_Contig850:40238..41084	1680791720.6503007-UTR-P-littoralis_Contig850:40238..41084	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig850 40239..41084 -
1680791720.8517644-UTR-P-littoralis_Contig850:52591..52685	1680791720.8517644-UTR-P-littoralis_Contig850:52591..52685	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig850 52592..52685 -
1680791720.8634567-UTR-P-littoralis_Contig850:56285..56352	1680791720.8634567-UTR-P-littoralis_Contig850:56285..56352	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig850 56286..56352 -

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig850.17.1	prot_P-littoralis_Contig850.17.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig850 41085..52591 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig850:40239..56352-
coding sequence from alignment at P-littoralis_Contig850:40239..56352-

protein sequence of mRNA_P-littoralis_Contig850.17.1

>prot_P-littoralis_Contig850.17.1 ID=prot_P-littoralis_Contig850.17.1|Name=mRNA_P-littoralis_Contig850.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=581bp
MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDK
LIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVV
LLAGEILKHVKGFVEDGLHPQIICRGLRKACEVAVARLDAVSIKPTDDEQ
AKDVLVRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLALSLIGVKK
VGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFENPGVLLLNVELELKSE
KESAEVRISDPDVYQEIVDAEWSIIYDKLDKCVASGAKIILSKLPVGDLA
TQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITAEVLGHCEKFE
ETQLGNERWNLFTGCPEARTATIILRGGSEQFMEESHRSIHDSLMIVKRC
LKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQL
ADNAGFDATDLLNRLRQKHARDGEAGKWFGVDVDTEGVCDTFESGVWEPT
INKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGGPISAG
MGGQGMAGMMGGGGRGQRPGVKMMKGRGGA*

mRNA from alignment at P-littoralis_Contig850:40239..56352-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig850.17.1 ID=mRNA_P-littoralis_Contig850.17.1|Name=mRNA_P-littoralis_Contig850.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=16114bp|location=Sequence derived from alignment at P-littoralis_Contig850:40239..56352- (Pylaiella littoralis U1_48)
TCTGTGTCTGCCGAGCTATCTGTTGCCTCTGACCAAGCGATATTCCCGTA
CGTCTTCAATAGATCAGGTGAGAGGTCTCTGCAGTGGTCAGGATCCCTCA
GCAGAAGTACGAATGTCCAGACATACGGGTTGCGAACTTGCACTCGGGCG
CGACAGCCGCAATCCGTTTACGCCCACCGGTTGACTGCTGGCTTGTTTCC
GCAGCACACTTCTCAATGGTCTTGCACCCTAGCAGCAGACGTAACCAGAG
GCTTCGCTTTGTGCGACTGGCTGGCCTGCCGATACTTGGAACAGCATGCT
GTCCATGCTAACAGCGAATCCCTAACGGGTGGGGGTGGGGTGTATTCCTC
GGAGAATGTGTGAATTGCGTTGTTCCATCTAGACTGATGCTCTATCTCCA
GGTTGCGTGCCGAGATATTCAATTCCATCCAGCGGCAGCAGCGGTGCACG
ATGCACGATGGCTGCAGCCGTGCAGACCCGCAGACAGCAGTGCTGCTGCG
CTATCCATGTACGAAGACGGACGACAAACGTGTCTGTGAAGTCGCCGTTG
TTGCTGTGTATCATTTGCTTCGGAAAAACAGCAGTAGTTGTCTTTTTACC
ATGACCTCTACTAATGATACGTAAGTTCCTGGGACATCGATCTCGATTTC
GATTTTTCAAAATCCCTCACTGAGTTAGGCCCAATCTTAGGCCCATTCTT
AGGCCCAATCTTATGGTAGATGGGCAACTGGAATTTCTCGACTTGGAAAA
ACGTTTTCCAAGCCTAATATTCCAAGTCGGACAATCAGACTGGTGCCAAC
TTCATAGGAGAACTAGAAAATTTGGGCAGCGATTGGAAATCAGATGGGGT
TGCCGGATGGACGGCAGGCGGTTTGGGCTATTTTCGATAAACTGCTGCTG
ATTTCGCAGAGCGGCAAGGCCAGGATCGCACGTCGCTTTGGTACCTGCAC
CTGGCCAGTGTTTGTGTGCTCGGTTGTTTGGGTGCTCGGTTGTTTGTATT
TGTTCTTGTTGTGTGCTGTGAACCACTGCGGCGGAACCTCGTGGATGCGC
GCGCAACGGATTCCAGCTTGGAATCCGAGGTCATTTGGCCTGGAATCCGA
GGGCAGATTCCAGGCGAGTCGCCTTGAATCCGGAGAAATGGAAAATATTT
TCCAATTCCGACCGAAAATAACCCCCATAAGACCACTTATTATAGCTGCA
GAAACCCTCCTTAGAAAAGGCCTTTTTTGATCTTGGGCGGTTTGACTACT
TGCTAAAGATGGAAAAACCCCCTTTTTTTATCTCAACTTTTCTTATAACT
TTTTCCGATCGACCCAATCGCTCAGAAAAATCACTTTTTCTAAGCGATTC
GATCGATCGGAAAATGCTTATTGAAAAAGTTTGGGCCCTCCTCACACAAC
CTCTCACGATGGGTCAGGTGACTTGAACAACTACATACAGCGGTATTATT
TTTGCAAGCCTATCGATACCTCGCGGCCCCAGATGACCTACGGAGGAGAG
CGACCAGGCACACAGCTCAAGGGCGATCGCTTTGTTGTTGCCGTGGGTTC
AATCGTTCGAGAGCAATGGATGGAACTCAAAAGTAGTGTGGGGTGAGGGG
GGAGAGCGGGCAGGAGGAGGGAGCCGCAGCAGGTATTTTGTATTTTGGGC
CGCTACATGAGTTTGGTTTTTCATCCATCACTCTCGAACCAATTGAGCCA
CAGCAATGCCAAAGCCATCGCCCGTGAGCTATGCCTCTGGTCCTTGTCCT
CCGGTCGTCATCTAAGGCCGCAAGGTATCAACTGGCTAGCAATAGAAGCG
TTGCAGAAACCGATGAGTTGTGAAAAAATTGAGAAGAAAGGCCGTTGAAT
CCAGCAAATTACATACCAGGTACTGCTGCATATATACTCCTGTACAGCAG
TACAGACAGACGGCGGAGATTTCTTCTCTTTTTTCACGAGTGATCGGTTT
CTGCAAGAGCTAGATTGCTAGCCTATTGATGCCTTGCGGCCCAAGATTAC
CAACGGAGGAGAGGGACAAGACACACAGCTCACGGTCGATGGCTTCGGTA
TTGCTTTGGCTCAATTGGTTCGATAGTTATGGAAGAGAAACCAAATTGGT
GTACCTGCGCAAAATACCTTGCTGCCCTGCTGCTGCTGCGGACTTCCTTC
TCTTTTCCTATTTTTTTTTCACACGTCATCGACGCCTGCACTCTTTTTTT
GTGAGCCTGTTGATGCCTCGCGGCCTCAAAGGACAATCGGAGATGCACGA
CCATACACACAGCTTACGGGGCATGGCTTTGATATTGCTGTGGCTTCATT
CATTCGAAAGTAATCAACAAAAAATACGTTACAGCAGCAACAGCAGCAGC
CTATTGAAACGATGTCAACACCGTCTGTCTGTAACAAAAAATGAATCCCC
CACGGAAAAAATATAATCAATCGCTATTATAAGAAGTGGTGCTTTTCGAA
GATCCTGTTGGAATTCTTCTTATTGAAAGAGGCGGATTCTAAGGAGATTT
TTTTCAGCTATAAGAAGTGGTCTAAGATAGACATATTTTCCAGGCCTGGA
ATTTGGATTCCAGTTCCTCATGTGAAACCCTTGGATTCCAGTTTTCGGCT
CTACCATAAGAGTGGGCCTTACAGCAAGGAATGTGTTTTATTTTCTCCCT
GCTTCGAGACAACCCAGTGTGAGCAGTGCACGTACCCTTCTGTTCCAGAC
ATGTACGTGGATATCATATCATACTGGTATTATTATAGTAACGGATCCAC
GAGTACCGGTACTCAAGTCCCTTTCGCCCTACCCCCGTCTCAAATCTACG
CTCCTGGTGAACGACTTGTTGGCCTGATTCTACTGCAGCCGTCGTGTGCG
TTCCGGCACTGCGTGGTAAATATTTTCACGCCCGGATCCAAAGAAGCGAA
CTACAGCAGTATCATACAGCAGTACATTTGACTACTGCTGTTGATTCCGT
TACTTTCCTACCGCAGTGGTATCGACTGGAAGATAAAATACCCCCTCCCT
CCCTTTCACTGGTCTCCAAGTCAGTCTGGATTGTCTGTTTACCGCTTTCG
TGCTGCTGTACATGGTACCCGAAGTATTACACGTGAGGTGATAAATACAC
AAAACACACGACGCAATCATAATGATGCTCCCACACTCATTACCGTTGTC
TTGCGTTGAGGATATTGCGCACACATTTCCTATGATACATAATCTCCTAC
ATCCGACCCTCTGTCCAGGGGCATCGCACTTTCACCTCCATCCTGGGCCA
GGGATCTCTCATGCACACATGGAAATGCTTGTACACATGCGAAAGACGTG
CTGAACGCTGAACACGCTTTCCGTGGATGGATATATGTTGTCCAACGCCT
CCTAAGCCCCACTACTAACGGTTACATCTGCGAAGTACTTCGAGTATGAT
ACTCGTGACATGGTCGTTTATCGCGATTCGACGATCTGTTGACTATCCCA
CCAGGTGTGATATGATGTTTATCTCATACATACGAGTACGAAGGACATAT
GTACATACGATATCCGTCCCTCTAGCATGGATGCTTATGCATCTTTTTTC
CCGCCCGTGTCCCGCACACGCACACACACACACACGCGCGCGCCCTGCTG
CCATCCTCACTGCTGTGCACGCACCTGTGCCCTTTCTCGCCACCGCTGCC
ACGCTTGTCGCACACAGCAAGCGCATCCCGTTTCTCGATCGGCACTGGTT
AATTACTAGGCGGGTACTGCTGTAGCAGGGGCCGGACCGTTACGACGGCA
CCACCACCACCATGTCGTACATGAATCAGCCGGGGATCATCCTCCTTAGG
GAGGGGACCGACTCCAGCCAGGGCAAGGCCCAACTGGTGTCCAACATCAA
CGCCTGCCAGGTCAGTTTCACGTGTGTAGGGTAGCAGCTACAAGTACCGT
TGCAGACCTTGGGTTTTCGTGGCTGCGCGGGAGTTTTTCTCCGGCGCGTT
GCGTTGAAGGAGCTTGGTGTGAGTGTTGCTGAAATGCTGTTTGGGTCAGT
TTTTTTTTCCCCTCCAATGTCTTGTGTTTATGGAGTCGGGTCCGGGCTGT
AATGCCCGCTGTGATGGGTAGGGTTTTGAGAATTACAGTGTGATTCCACA
TGTGTGATACACGACGGGCGATCTCTTGACAGCGCACAAAGCTCTTATCT
CTGAGTGTACGTTTCTGGCTTGCCTTCATTGACGTATGAGCGTGCTTTCT
GAACTCCGTGTTTGACGGAAATTTTAACTTTTTTGGTACGTCAGCTATGA
TAGATGCCATCATCATCATTGTTATCATCCCTTACGAACGCGTGCGCTGC
CCTGCGTTCCTTTTTCCGTGTTGGGTTTCCCACACGTCGTGAAGGCGGTG
ATGGACACGGTGCGGTCCACTCTCGGTCCCCGGGGCATGGACAAGCTCAT
CTTCGACGGCCAGAAGGTGATGACACAAACGGAAGGAACATCAGAATCAG
AGAAACCACGCTTCTGCTGTAGCCTAGGTTTTAGGAGGCGCTTTCCGTTG
AAGACACCAAAAAGGGGCATGATACATTGCAATTTTCTCCACGTCTAACT
CTAGTATCCGTCACTTAATATGTAGTCGGGGGGGCGTTAGGTGTACGATC
TATGAAAGCTCGGTTCGTGTGCACGCCACACATCATGTTCGAACCCTCCG
TCAGACCGGTAAAGAAGCACGCTCGTCTTGCTAATACTGCTGTGGGCGGT
ACGAGTCTCCTTTGTCTTCTGTAGTTTGACCTAACCGTGCGAAATCGTGG
TTCGATTCATGCGGGAGAATACGTCAAAATCACCGCACCTTACGGCGGCG
CATTTTGGAATTTTCGGAGTCGTGGCGTGATCTTGCAAGCAGACCAATCA
AAATTTATGAAAGGAAAAATGGACTTATGTTCGGGTGATGGTTGGAAAAG
GTGACAATCAAAATTGATGATGTCACGGAAAAGTGTACTTTTGTTTGGGT
GTTGGATGGAAAACGTGAGACCAATCAAAATTGATGACTCGCGGAAAAGT
GGATGCATGTCGGGTGTCGTTGGAAAATGTGAGACCAATCAAATTTGACT
CTTCACACGGAAAAGTGGGTTTATGTTCGGACGTTGGTTGGAAAAGGTGA
CCATCTCGAACGATGGGGCCACCATCATGAAACTGCTGGACATCGCACAC
CCCGCGGCGAAGACGCTGGTGGACATCTCCATGTCCCAGGATGCCGAGGT
GCGCAAGGAAACCACGGGAACAAAAAACATCTCGGATCGTATCATAACTT
CTGTTACTTATCTTCTGGGTGGTAGTTTTTCCCGCTGTGCGTACAAGTAT
GATGGTGTTTTATATTCTGGATGGTAGTTATTCCCGCTGTGCGCATGTAG
TATTCTATCTTCTAGATGGTTATCCCAGCTGTGTGTAGGTTGGTGGACCA
GGAATGCTCGTGAAGGCTTGGCGGTGCTATCATAAGGCCTTTCTCTCGTT
CGCGTAAGGGATGTTGTTTGGGGGACCCGCTCGCGGTTCGGGGCTTTCGA
GATTTTCTGGTAAAGTTATGGTAAATTCACGAAGTATGTCCAACCTTCAC
CTTCCCGTTGCTGCACCTCGCTTTTGGCGTGAGGTGCAGACATAGCTACT
TCTGTATGGAAGTCAAGAGTTATGATACATGTAGCAGCGGCCAGTTGGCT
TCAGAGGGCTGCAGTATTTGGTCGACTGACTTCTCGGTTTGGACGAGGTT
TGGCCTGGTCGTGTGCGGGTTGCCGCTGGTCGCCAAGTCTGCCGTCGATG
CCCCTCACGTACGCTTTTTCGGTCTGTGATACTCTCGTGACTTTGCATTT
TCGCGCCGAGTTCCATCGACGTCACCGCTGCTGTTGCGTGCGTGACCTTT
GTCTTGTCTGGAGCGGTGTGGGGGCTGGGAATAACAATTTGTTGTTTGAT
ACATGCAGCCACGTCGCAGAGGGAACTCCGAGGTGACACATGAATCGATG
TTGACCGAGAAGCGCGTCAACGTGTTGTTGTTGTTGTTGTTGTTAGGTGG
GTGACGGCACGACTTCGGTGGTGCTTCTGGCTGGGGAGATCTTGAAGCAC
GTCAAGGGGTTTGTCGAGGACGGTCTGCACCCCCAGGTGAATGGAGACGC
TTCTGTTGCTCCAACTGAAGGTGTTGCCCTAGCTGAAAGGTGTTGCTCTA
ACTGCTGTAGATGATGCTGCGTCAGCTACAGATGTTCATCTCTCTTGCTC
TAGTTGTGAAGTTGCTCTTCCTAGATGTTGCTGCTGCTGCGTCGTTGCTG
CTGTTACTGCTGACGACCACCCTTCATTTTGAACACGACGTGTGTGGCCC
ATCTTCCCCGTTACCCCCTGCCCTTCCTCCTCCTCCTCCCTGCTTCTGCT
CTTTCGCCGTTCCCGGCGAAACTAAGATCATCTGCCGCGGCCTAAGGAAG
GCGTGTGAGGTTGCCGTTGCGAGGCTTGACGCTGTGTCGATTAAGCCGAC
GGATGATGAACAGGTGAGCTGCGTTCGGAGGTCAACAGGGTAGGGCACTT
GTCCTCTGACCCCCCGAGGGGGGCCGTGAGGCGATGGAGGCGAGCGGGGG
AGGGGCAGAAGCGAGACTGCTATTGTTGTTTTTGTTGTCGTTGTCGTTGA
TGTTGTGGCAGCAGGTTGGCTGGTGCCCGGACAGTGCGGGGGGTAGGGGT
ACCGTGGTTCGGTAGCATACCACACCGGACCCCCCCCCGTACCGACTTAA
GAAGCTGGAATCTCGATTTTTCCACCGCATAAAGCGCGTTGGTGCCGAAA
CGCATCGTTCTGTGTTGGCATCCTCTATATATTGCAGTAACCGAGCATTG
ACAGTCGGTCCAGGAGGGATGCCGTGCGGTATCTATGCGACCTACTGCTG
TAGTCGGGGTTGGAGAGGGAGCATATTGGTGTAAAATTTCGGGAGGGCGC
CTCGACGCAATTCTCGTAGCTCATAACCTGTCATGTACGATAAACAAAGC
GCGAAGACTCCACGGTGAGCTCAGCTAAGCCCCGCCAAATCGAACACCAG
AGTACTGCTGTGTCAGCAATAGGCAATTTGCCACGTCCGTCGGCCGGCGG
TTTCGGGAATGATGGCGACCAGCACCAGCCCGCCTGGCTTGGTGGTACCC
GCCTTTATCACCACAAAATAGGAAACGTTTGGAGTGCGCGATCTAGTCGA
ATTAAACATACGAAATGAGAGCCAACAACAAAGATTCAAGTTACGTACTC
CAAATACTTGAACTTATAGTTTTCGCATGATATCATCTATGGTACCTCGT
AAGATTAGTATTCGTCCGAATTCGGTTTGGATTTTTTTGTTGTTTTCTTG
GCCCGGGCTTCTTTTTTTACACCTACTGTGCTCGGCCTGCTGTTCGAACA
CATCTGTCGGTGTTGCTTGTTCGCCTTTATGGCGTGGTGTATGTGTGTTC
GTTTTTGTTATTGCTAGTACACATTGGTTGGTGTCTCGGTCTGGCCCGGT
TTTTCACGAGTGTAAGCCAACAGCATGCGAATGATGATTATGATATTCTT
GGTTCGTTTTGTCTTGCGGCACCGGCGGCACATGATAGGCTAAGGACGTC
CTCGTCAGGTGTGCGGGCACGGCGCTCAACTCGAAGCTCATCTCCTCGCA
GAAGGACCTGTTCGCACCCATGGTCGTCGAAGCCGTGTCCAACCTCGACC
AGCAGCTGCTCGCTCTCAGCCTCGTGAGTGTCTTCGGTTGGTGGCGGCTA
CCCTCATGAGTGTTTTGAGTCTGTGCGACTACCCTCGCGAGTGTTTGGGT
TTGTGGCGGCTACGAAGACCAGCGGCATCGGAAGCGGTGCACGGTGCAAC
GCTCTGCCAGATTTGCTGGTGCCGTCTCACCTTCGGGGCCTGGGGTCCCC
CTACACTACCATTTGCTCTTTTAATGTTGCGCTTTTTTGGGGGGTGGGGG
GGGGGGGTATGATTGTTTGCTTGGTCGACGCACTGGTGGGGCCTTAAGCC
GCGAGTCCCCGCTGTGTGTGCAATTACTCTTTTTGTGTTCTGCTGCGTTG
CGCTGCCTTGCCTTGCCTTGACTTGCCTTGACTTGCCTTGCCTTGCCTCC
GCGGTCAGATTGGTGTAAAGAAGGTCGGCGGCGGCAGCGTTACTGACAGC
TTCCTGGTGAAGGGTGTCGCCTTCAAGAAGACCTTCAGCTATGCCGGTTT
CGAGCAGCAGCCGAAGAGCTTCGAAAACCCTGGGGTCTTGCTGCTCAACG
TCGAGCTGGAGCTCAAGAGCGAGAAGGTGGGTACTGTATATGCTTGACAG
TCCTGTTGTTGCTGGCGTTTTGTGGTGGTGGTGTTATCTACTGGATATAT
TCTAGTGAAGTGTTGTAGACGCACAAGGCAGGTACCGTGTACTGCTGCAT
CTTGCGTTGCTGCCGTGCTGTGGTTGTGGTGGTTGTTGTTGTTGTCTTCT
CTTCACATGAATCACAGTTCCGGCCTTTGTCCAGCTCGTACTCATTTTTT
TTTTATTATTGAACCGCTCCCGTTTTTTTGTTTGTGTACCGCTCCCGTTT
TTTTTTTTTGTATATGTGATACCGTTTTTTTTCTCGTATGACATGAGGTC
CTGTATGAATGGGGTCTTTTAATCGTATTTGTTGATGTCTCTTTTTTTTA
TTTCGTGTGAATGTCTTTTTGTGCGCCACGCCAGGAATCGGCCGAAGTGC
GCATCTCCGACCCGGATGTTTACCAGGAGATCGTGGACGCGGAGTGGAGC
ATCATCTACGACAAGCTTGACAAGTGAGCAGTGGTGTTGGTTGGCTTGAC
GCGAGTTGTCGGTGATGGTGTGGGCGTTGGTGTTGGTGTTGGTGTTGAGT
AAGCAGGAAGGCTCGAGAGAGCGGCAGCAGCTGATGCACGGGCCTATTTT
GGGACAGTAGTAGACGAGCTTGAGATGTCGGCAGTATATATTATTGTGGA
GCATCATCTACGGCAAGCTTGAGTGAAAGAGCGTCGTTGGTTGGGCGTGA
CGCAAGCAGTCGTTAGAAAAGCTTGAGAGAGCGGTTTCGGTCGGCGCACG
GATATATTTTGGTACAGCATTAGACGAGCTTGAGATGTCGACAGTATACA
TAAAATTGTGGAGCATCTCCTACGACAAGCTTGAGGAGAGGGCGGGGTTG
ATTGCGTGACGCAAGTAGTTGGTAGAAAACTTGAGAAACCGGTAGCAATT
GACGCACGGATGTGTTATGGTACAGCAGAAGACGAGCTTGAGATGTCGGC
GGTATATGTTACTGTGGAGCATCACCTACGACGAGCTTGAGGATTGAGTG
CTTTTCGGATGCGTGGTCGACCGATGGTCAAATTACTGAGAGGCAAGCAA
CATAACCCCCCCGCGCCGTCCCCATTGTCACGGTGCCACGCACCACCGTT
TTTATGCCGCACGCACGGACCGCTCGGGCGCTGAAGGTGCGTGGCAAGCG
GGGCAAAAATCATCCTCTCCAAGCTTCCCGTGGGAGACTTGGCTACGCAG
TTTTTCGCCGACCGCAACCTCTTCTGCGCCGGGCGGGTGGCGCAGGACGA
CATGGAGAGAGTGGCAAAGGTGAAAAAAGGAAAAGATGCGTTCTCGGGGG
GCGGCAACAAAACAGCCCGAATCTGAATAACTGTTGGTTCTCTCTCTGAA
TGATGAAAGTTTCACGCCGGGCGGGTGGCGCAGGGTGTATGTAGCCTTTG
CCAGCTTACTTTGCACCCCCAACATACGAGGTAAAACACCGAGGTTTATT
TAGCTTTTTTTTTTTTCTGTCTATTTTTTCCACCGTATCCTCAACACGGG
GCGGAGCCGCGCTGGGCGTCATCCGGCGTTGGGGTTGGGTCGACGCCCTA
ACCACTTTTTTTGTTGAAATAAACTTGTATACACCGACAGTTAAAACCCA
TATTATTCCTGACATATTTCAGTCTTTATATGGTATGTTTAGGGGTGCCA
ACGTAGTAAAGAGCCCTCGGGTGTCCCGGAGAGACAGGCCAAGGTGAAAA
GTGGAAAGAGGTATTTCGGGGACGGTAATAAAACAACCGGACGGTAATAT
TCTGAATAACTTTTGGTCCTCTGAATGATGCGATTTTCACGCCGGGCGGG
TGGCGCAGGGTGAGCGGCATGGAGAGACAGGCTGAGTAGAAAGGAAAAGA
GGCGTTAACGGGACAAGTGCACCAACAACCCGACTTATGGTTGGCTCTTT
TTTTTTTTTTTGGTGGCCGCTAGTTTTTGGGGCAGCAGCGACTACCGTAG
GTTGCATGAGACATCACGCTGGCGTGATTACATTTCTGGGTGTAAAAAAT
GATCACACCGGTGTGGTAGGTGTTGTGTAATCTTGACCGGGGGTGTGGTA
TCTTCTGTCACCCTTTTTCACTGACTGAGACGGACTTGCGCCTTTTTCGG
GATGGAAAAAAGTAGCACACGAGTGTGGTATCGCGTAACTTTTCAGAGGG
GGCGTGGTATCTTATGAGAGTGTGATATCTTATGCAACCTGCGGTAGGCG
ACGGATGTGGTCTTGGTATTGGGGGCGCTGGCATTCTGACTGGATGGACA
TGCTCGTGGCTTGATGATGTTTTGGCGGTGGGCTCTCTCACCACAAGCGA
AGACGGCATGTGTGTCCGAATCATTGCGTTGGTGGTCAAGAGGGGTGCGT
GAGCTGGTTCGGCCCGCCTTCTCTTCGTCGCTGTGTGCTACAGTACAAAC
TGCATGCGTGTCGCCCTTACTCTGCTTGGGTTTCGCTGGAACAGGCCGTT
GGGTGGCCTTTGTCGGCAGTGCTTCTTGCCGATCTAATCTCATGGCGTTT
CTTTTGTTGACTGACACCAACAGGCCACAGGAGGTAAGGTGCAGACCTCC
ATCCACGGCATCACCGCCGAGGTGCTTGGCCACTGCGAGAAGTTTGAGGA
AACGCAGCTCGGAAACGAGCGCTGGAACCTCTTCACGGGCTGCCCCGAAG
CACGCACGGCAACCATTATCCTCAGGGGCGGGTCCGAGCAGGTGCGTTGT
TGTTGTTGTTGTTGTTGTTGTTGCTGCTGTTGTTCTTGTCCTTGTCCTTG
TCCTTGTCCTTGTCCTTGTTGGTGGTGGCGGTGGTGGGGGTGGTGGTAGT
GTTGTGGCGGTGGTAGTGTTGTTGTTGTTGTTGTAGTTGTTGTTGTTGCT
GTTTTTGCGAGCCATTTATCCCCCCCCCCAAAAAATGAACTCTTGTCCTA
CATTTTTATACTGTTTTCCAATCTAACGTTTCTCCACCAACATCGTATCA
TTCCGATGGATCTATCCCGACGTGTCGCTGCTGTAGTCAGATTAACCTTT
CGGCTTTTGACTGCTTTTTGTTGTGGTCGTCCTCGCTTTATCTTACCGGT
GTCACCTGTCCCACGTCACGTCTAATCTCCTTTTGCCTCATCCCGTCACT
CCCTGCATGCCATGGCATTCCCAGTTTATGGAGGAGTCTCACCGTAGCAT
CCACGACTCGCTCATGATCGTCAAGCGCTGCCTGAAGAATCGCGAGGTAC
AGTACGGTACGGTGCTGAACGCCAACACGCCTTGGCTTTGACCGTGTGGG
GGTGGAGGTGGAATTTGGAGGATGACGTTTGATAGCGAGGCACGCCCGGC
TTGTCCACCGCCGTGGGACTATGGCGAAGCGAAAAACCCCGCGTGATGTC
GGCACCCGTGCGGATTTTTTTCTTTCTGTATTGTCAGGTTCCTCATCATG
GTTTGGGTTTATCATCGCATCTAGTCTGGGAGTGCTTTTTATGTTGGCTG
GTTTGTATTGCTGGTATTTCCACGGCGCTATTTTCGTCGGCTATTTGCCA
TAATGTCGTTTGCATGTTTGAACCTGTGAAACTCATGGACGCCAGGTGGT
GGCAGGAGGGGGGGCGATCGAGATGGAGCTGTCCAAGGCCCTTCGTGATC
ACTCCAAGACCATAAAGGGGAAGCAGCAGCTCATCATGAGCTCGTATGCC
AAGGCGCTGGAGATCATCCCCCGACAACTGGTGAGAACAAAGGAGGGCAA
TGCCTGAGTGTGATGCTTCAACGCGACTGTGATGCCCATTGCCTGTCGTT
GCCTGTGTTGAATGTCTGTTCCTTTTTCTTTTTTTTCAATATTTTCGGGG
TGTTTTTTTTTTTTTCGTATTTCCGTGGGTGTGGTGTCTCTCTGGCACTG
ATTTATCGGCTAGGGCTTCAGATTTTTCCCCAAATCAAACCGGTGACAAA
GAAGGAAGTCCTGCCGTATATATTGTAGCAGTATGTAGCGATGCTGAATG
AAAGGGGCTCAAGGAACGTACTGGCAAGTACCTCCCCCCCCCTCCATGTC
AAAATGCAGCACTTACGTATGTTGAGGAATCCCGGGATGCTTTCTGATTC
GATGTCACTACCTCCATCCAAATCTTCATCTTCGGCTGCATTATTGCACT
GTGCAAACTTCGAACTAGCCTGCTTGGAATGTGCCCGCTAGTACGTAAGC
TTGGAGCTATCATCCGGAAGGACTTGTTGTACGGAGCACCGCCCGCGAGC
GCTCACCTTGGAGCTATCGTCTGGAGGACTTGGCACCTTCAGGGAATCGC
CCCGTGGGAAGACACGGCAGACATGACCTACCCTCCCGTCATGGTGGCAC
CGCCGTTCTTGTGCGCTCTTGTGCACTCTTGTGCGCCTCACAAGAGCGCC
CGAGCCATCATGGCGAGGTGGTGGTGGTTGGTGTCCACCGCTGTGTCTCG
TACCCGTGGACAATTCGTTGCGGGTGCTGAGTCCACATTAACGGACCTCT
TCGCCGATTGTTTTCGTCCACCTCGGGTTCCGTCGCAAGGTTGCCAGGTT
TTGCCGGCTGACCGCTCGCGACTCGTGTGTGCCTCGGTTTCTTGGTCCGA
CCCACGTCAATTTTCAAGGCGAACTACAAACAGTGCATCACACCGACTCG
AACTCCGCACCGTAACCATGGTACTTGTAACTCACAACGACAGGTAGTAA
GTAGTCTTCCGAACTAGACAAACATCGAACGCTCTTTGGGGCTTCAATTC
TCTCATTGCCCTCGATTAATCCTCTCATTTCCCTCGATTCGATCGTTTTT
TCGTGTTTTTTTTTGGTGTCATCGTTCCAGGCGGACAACGCAGGGTTCGA
CGCGACCGACTTACTCAACCGCCTCCGGCAGAAGCACGCGAGGGATGGGG
AGGCGGGCAAGTGGTTCGGGGTCGACGTTGACACAGAGGGTACGTTTTTT
TTTTCTGCAACTTGTGTGTTGTCATTCTTCTCGCTGCCGTTCCCTCTATC
AAGTGCAGAACATCTCGTGAAACTACTTGTCCAGTAAGACAACAACTGTG
TCTACTACAGAAAATGACTGATGTCTTCAGGAACAACGTACGGGCGCTTG
CCCTCAGGACAAATACAAGTTCGGGCAGGTTATACTGAAGTCTGTCCAGA
AAATATACGTTTGTTTTCGAGCCAAGAAACGCAGCCAGCCGATCAAGGTC
AAAATATGCGTTTTCATGACAGGGTGTCCTATGCTACTGTACTGGTCCTC
CTCTGTCTCTGCCGGTGTCTCTGTCTTGGCCTGTATCAGGCATCTCGTAT
TCACTCTCGTTCACCCTTTTTGCCGTGCGGGCGTTCTCTGTCTTCTCTTT
CTCTCTCTCTCTTTCCCTCTCACTTTTTCTTATGTCTACTCACGCTTTCA
CCCGACTTCGTTGCACCTTTCGGCTCTCCCCCCCTCTCCCCCTGATACAG
TACCCACTCTACACTTTCCTTGGTTGCTTGTCTTGCGTTCTCTGAAGCCG
CTTTATGTTCACCCTTGTTGCTTGTCACGCCTCGTTCCCTAAATTTCTCT
TGCCGACCCCCCCCCCCGCCCCCGCGGACACAGGCGTGTGCGACACGTTC
GAGTCCGGCGTGTGGGAACCGACGATCAACAAGAGAAACTCTTTGAGGTC
GGCGACGGAAGCTGCTTGCCTCATTCTTTCCATCGACGAAACCGTCAAGA
ACCCCCAGGTAAAATCCTCCTCGTTCTCCAGCCACGATGCTTTTTTTTTT
TTTTCCTGTTTCGTCTTGATCGAGCATCTTGGCGAGTGTGTCTATCCGAT
CTACCGCCGTAGGTTGCATAAGATATCATATCGCACCGGTGTGATGACGT
TTTTGGGCTTGAAAAAAATATCACACCAGCGTGCGGTATCGTGTAATTTG
ACTGGGAGTGTGGTATCTTCCGTCTCACCCTTTGTACTGACTGAGACAGA
CCGGCGCCTTTTCGACATGGAAAAAATAGCACATGTGGTATTGTGTAACT
ATTTGGAGGGGGGTGTGGTATCTTGTGAAAGTGTGATATCTCATGCAACC
CACGGTAAAGACCGTCTATGCGACTTTTTACGGCACGCGGTGGCGCAGGG
CCGAGGCTATTACACCAACTGAGTTCCTTTCCCTGAACGCCTGTCCTCCT
GTCCGCCATGTTTGCGGTACTGTAGTATTGTGGCTACTCTGCTGTAGAAG
TGGGCTATGTATTACAACAACTCTCATTTGTGTTCGGCAGTCTCTCCGAA
AGTCGTTCTGTATGTATCATGCCCTCAAGCTCGGGTGCCGACGAACAGCG
AACAGCCTTCCCTTTTCGGCGAGCAGTCGATCTCCGTTCGAACCGTCCGG
GTGGTGATTTATTGTACACGTGGATTGGGCGTCTAAACTAACCACCCTTG
TGCGCCCGCCTAAAGGTTCGTAGAGACACGTGAGTTTTTCCTGCAGAATA
CGAAGCATAAAGAGGGTGTTGTTGCACCCGACTGAGCCGCGCCGAAACAC
CAGCACATACATACCCTGGCTCTCGAACTACTGTGCCCCCTCCTACCCCC
CGCCCGAAGCACTCCACCAGACTCCGTGCGCGCAAATCTCCACTCACTCT
TCGCTTTTCACGACCTGCAACTGCTGCGTCTTCTGCCTGGAGCACAATGC
TGTAAACTACCTTCTACGATATGCTAAGCTACAGTACCATACCTGAGTGT
TGCTGCCATAATAACTCTACACAAATAACAACAGAAAAGCCTGTCCTCAC
TTGTTTTCTAGGGCACGGGCCACTGCTTTTGATTCAGTCCGCCACGTGTG
TCCTTCTTCCGAACTACGGTCATGTTCCCGTGATCGTGATTATGAGCACG
TATTCGTGGTCCCTTGACGCTCTGTTCGTTCTTGCGCTATGATACGTGTC
CACACGCAGAGCGAGAAGCAGGGAGCGCCCAGCCAGGGCGTTGGACTAGG
GAGGGGAGGCCCCATCAGTGCCGGGATGGGGGGGCAGGGGATGGCGGGAA
TGATGGGGGGCGGGGGACGCGGCCAGAGGCCCGGAGTAAAAATGATGAAG
GGTAGGGGGGGTGCGTAGGAAAACGACCATCATAGTTGGGGCCTCTCGGG
GCGTTTTTGGTTGGTCGCTGCTCGAGTTGGCGATGTGGGGAGGCCGGGGG
GTTTACGGCTTGGGTGTTTGGCGAGGCAAGGGTGGGTGGGTGCGGTGGGC
GCGGGGATCCCTGAGCTTGTAGGGCCTGTAGTTATTGTGCATTGAGCGTG
GAGTTGGTTGGGTGGGTGGAGTTTGGGCGGCTTTCGAGGCGGCGAGCGTT
GTTGGCGCACAAGAAGGCGGAGTTGGATGCGGATGCGGATGCGTACGCTG
CACCGGCGGCGGCGGCCTCAGTTAGCTCTCCTTTTGCCGGGCTTGGCTGT
TACGGTGGCTTAAGTGGAAGGAAGTGTCCGACCGCGGCGGGGAGATGGGG
TTCTTGTTTCGCGTCCAGTCAGTCCACCTTGAGGTAGTCGTTGTTTATTT
TCGTGTTCATTCGAAGTGGCAGCCTTTTCGCTGTCATGTAGAAAACGAGA
TACCTCAACAATGCGCAGCCACTCTCCGCTGACTGGAGCGGGAGGTTTCC
TGCCTTTCCCACGGCCTTTTCTTCCCGCTGGTGTCGAGGCCACTGGTAAA
CGTCATGGTACACGAGGGGATGTGGCAACGCTGCCCTGTGGGTTCAAAAC
TTTCTCACTACACACATAACAGACACCCTCTTCGTTCCGTGCGGCGAAAG
GAGTTCGACCCGGAACGTGTGTTCAAGCAATCGGGCTACTACTACTGGGG
TCTTCCGTCGACCGTTCAGAGCGTACCGTTTAGGTTTTGACTACGCTCAC
AGCTCAACAGTTTGAGCATCTCAACACCCTCGATGCTAGAGATTGCTCTC
AGCTCCGGTAACGG

Coding sequence (CDS) from alignment at P-littoralis_Contig850:40239..56352-

>mRNA_P-littoralis_Contig850.17.1 ID=mRNA_P-littoralis_Contig850.17.1|Name=mRNA_P-littoralis_Contig850.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1743bp|location=Sequence derived from alignment at P-littoralis_Contig850:40239..56352- (Pylaiella littoralis U1_48)
ATGTCGTACATGAATCAGCCGGGGATCATCCTCCTTAGGGAGGGGACCGA
CTCCAGCCAGGGCAAGGCCCAACTGGTGTCCAACATCAACGCCTGCCAGG
CGGTGATGGACACGGTGCGGTCCACTCTCGGTCCCCGGGGCATGGACAAG
CTCATCTTCGACGGCCAGAAGGTGACCATCTCGAACGATGGGGCCACCAT
CATGAAACTGCTGGACATCGCACACCCCGCGGCGAAGACGCTGGTGGACA
TCTCCATGTCCCAGGATGCCGAGGTGGGTGACGGCACGACTTCGGTGGTG
CTTCTGGCTGGGGAGATCTTGAAGCACGTCAAGGGGTTTGTCGAGGACGG
TCTGCACCCCCAGATCATCTGCCGCGGCCTAAGGAAGGCGTGTGAGGTTG
CCGTTGCGAGGCTTGACGCTGTGTCGATTAAGCCGACGGATGATGAACAG
GCTAAGGACGTCCTCGTCAGGTGTGCGGGCACGGCGCTCAACTCGAAGCT
CATCTCCTCGCAGAAGGACCTGTTCGCACCCATGGTCGTCGAAGCCGTGT
CCAACCTCGACCAGCAGCTGCTCGCTCTCAGCCTCATTGGTGTAAAGAAG
GTCGGCGGCGGCAGCGTTACTGACAGCTTCCTGGTGAAGGGTGTCGCCTT
CAAGAAGACCTTCAGCTATGCCGGTTTCGAGCAGCAGCCGAAGAGCTTCG
AAAACCCTGGGGTCTTGCTGCTCAACGTCGAGCTGGAGCTCAAGAGCGAG
AAGGAATCGGCCGAAGTGCGCATCTCCGACCCGGATGTTTACCAGGAGAT
CGTGGACGCGGAGTGGAGCATCATCTACGACAAGCTTGACAAGTGCGTGG
CAAGCGGGGCAAAAATCATCCTCTCCAAGCTTCCCGTGGGAGACTTGGCT
ACGCAGTTTTTCGCCGACCGCAACCTCTTCTGCGCCGGGCGGGTGGCGCA
GGACGACATGGAGAGAGTGGCAAAGGCCACAGGAGGTAAGGTGCAGACCT
CCATCCACGGCATCACCGCCGAGGTGCTTGGCCACTGCGAGAAGTTTGAG
GAAACGCAGCTCGGAAACGAGCGCTGGAACCTCTTCACGGGCTGCCCCGA
AGCACGCACGGCAACCATTATCCTCAGGGGCGGGTCCGAGCAGTTTATGG
AGGAGTCTCACCGTAGCATCCACGACTCGCTCATGATCGTCAAGCGCTGC
CTGAAGAATCGCGAGGTGGTGGCAGGAGGGGGGGCGATCGAGATGGAGCT
GTCCAAGGCCCTTCGTGATCACTCCAAGACCATAAAGGGGAAGCAGCAGC
TCATCATGAGCTCGTATGCCAAGGCGCTGGAGATCATCCCCCGACAACTG
GCGGACAACGCAGGGTTCGACGCGACCGACTTACTCAACCGCCTCCGGCA
GAAGCACGCGAGGGATGGGGAGGCGGGCAAGTGGTTCGGGGTCGACGTTG
ACACAGAGGGCGTGTGCGACACGTTCGAGTCCGGCGTGTGGGAACCGACG
ATCAACAAGAGAAACTCTTTGAGGTCGGCGACGGAAGCTGCTTGCCTCAT
TCTTTCCATCGACGAAACCGTCAAGAACCCCCAGAGCGAGAAGCAGGGAG
CGCCCAGCCAGGGCGTTGGACTAGGGAGGGGAGGCCCCATCAGTGCCGGG
ATGGGGGGGCAGGGGATGGCGGGAATGATGGGGGGCGGGGGACGCGGCCA
GAGGCCCGGAGTAAAAATGATGAAGGGTAGGGGGGGTGCGTAG