prot_P-littoralis_Contig85.113.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig85.113.2
Unique Nameprot_P-littoralis_Contig85.113.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length232
Homology
BLAST of mRNA_P-littoralis_Contig85.113.2 vs. uniprot
Match: D7G0N6_ECTSI (Ubiquitin-like protein ATG12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N6_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 2.870e-104
Identity = 165/235 (70.21%), Postives = 187/235 (79.57%), Query Frame = 0
Query:    1 MDLTDLTIQPGKVHLVREILHDGITGSVRVLGSLKSYDAAAAVAVVEYKGHELSIDASLLTDFQFRTDSLYEFIGEIQARSREKGESAREXXXXXXXXXXXETCIMAFNVQQKSSEETAWKR---GVME-DLPKQEGGGRIAPPPTPEKVKVHFKPIANAPILRKSKFQVNATWTCSELESSLRNMLQISDTTPLFLYCNSAFEPSPDQSLSDLYKCFNVNKELLMSYSITEAWV 231
            MDLTDLTIQPGK+HLVREIL DG+TGSVRVLGSLKSYDAAA VAVV+YKG +L+IDA LLTDFQFR DSLYEFIGE+Q  +     +AR              C +A  +   ++  TA +R   G+M+  +P++    RI PP TPEKVKVHFKPIANAPILRKSKFQVN+ W CSELE+SLR+MLQISDTTPLFLYCNSAFEPSPDQSLSDLYKCFNVNKELLM+YSITEAWV
Sbjct:    1 MDLTDLTIQPGKIHLVREILRDGVTGSVRVLGSLKSYDAAADVAVVDYKGDQLTIDACLLTDFQFRIDSLYEFIGEVQGAAG----AARVSRRPGLPRWGGALCSIARGLTAGAATTTAAERLSIGIMDVSVPERGETSRIPPPATPEKVKVHFKPIANAPILRKSKFQVNSAWNCSELEASLRSMLQISDTTPLFLYCNSAFEPSPDQSLSDLYKCFNVNKELLMNYSITEAWV 231          
BLAST of mRNA_P-littoralis_Contig85.113.2 vs. uniprot
Match: A0A835ZER3_9STRA (Ubiquitin-like protein ATG12 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER3_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.690e-27
Identity = 47/85 (55.29%), Postives = 68/85 (80.00%), Query Frame = 0
Query:  146 VKVHFKPIANAPILRKSKFQVNATWTCSELESSLRNMLQISDTTPLFLYCNSAFEPSPDQSLSDLYKCFNVNKELLMSYSITEAW 230
            V++HF PI+NAPILR++KF+V  +WT  +L++SLR  L++  +TPLF+YCNSAF PSPDQ L +L+ CF    EL+++YS++EAW
Sbjct:    1 VRIHFMPISNAPILRQTKFRVPGSWTFQDLQASLRTQLKLPSSTPLFVYCNSAFCPSPDQILIELFLCFGTGGELVINYSLSEAW 85          
BLAST of mRNA_P-littoralis_Contig85.113.2 vs. uniprot
Match: A0A7S2CZJ6_9STRA (Ubiquitin-like protein ATG12 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CZJ6_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.420e-25
Identity = 49/105 (46.67%), Postives = 72/105 (68.57%), Query Frame = 0
Query:  126 EDLPKQEGGGRIAPPPTPEKVKVHFKPIANAPILRKSKFQVNATWTCSELESSLRNMLQISDTTPLFLYCNSAFEPSPDQSLSDLYKCFNVNKELLMSYSITEAW 230
            ++ PKQ     +A P   +KV+VHF+ + +API+RK+KFQ+ A    + +   LR  L++ + TPLF+YCNSAF PSPDQ L DLY+CF  + EL+++Y + EAW
Sbjct:   23 QEQPKQRSSASLARP-AGDKVRVHFQAVGSAPIMRKNKFQIGAHERFATIPKFLRKQLRLDENTPLFVYCNSAFCPSPDQRLQDLYQCFQRSNELVLNYCVQEAW 126          
BLAST of mRNA_P-littoralis_Contig85.113.2 vs. uniprot
Match: F0WHJ6_9STRA (Ubiquitin-like protein ATG12 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHJ6_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 7.410e-21
Identity = 43/86 (50.00%), Postives = 61/86 (70.93%), Query Frame = 0
Query:  145 KVKVHFKPIANAPILRKSKFQVNATWTCSELESSLRNMLQISDTTPLFLYCNSAFEPSPDQSLSDLYKCFNVNKELLMSYSITEAW 230
            KV +HF  + NAPIL+K+KF ++A  T S +   LR  L++  +  LF+YCN AF P+PDQSL DL KCF+V+  L+++YS+T AW
Sbjct:    6 KVTLHFVAVGNAPILQKTKFTIDANDTLSVVYDFLRKQLKLKLSDALFIYCNRAFAPAPDQSLLDLQKCFSVDNVLVLNYSLTHAW 91          
BLAST of mRNA_P-littoralis_Contig85.113.2 vs. uniprot
Match: A0A6G0WMC5_9STRA (Ubiquitin-like protein ATG12 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMC5_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.630e-20
Identity = 41/91 (45.05%), Postives = 61/91 (67.03%), Query Frame = 0
Query:  140 PPTPEKVKVHFKPIANAPILRKSKFQVNATWTCSELESSLRNMLQISDTTPLFLYCNSAFEPSPDQSLSDLYKCFNVNKELLMSYSITEAW 230
            P  PEKV + F  +  API+++SKF VN     S +   LR  L++ D   LF+YCN+AF P+PDQ +S+L++CF +N  L+++YS T+AW
Sbjct:   22 PSGPEKVTIQFTAVGGAPIMKRSKFTVNGNDPLSNVYIFLRKQLRLKDEDSLFVYCNNAFAPTPDQRMSELFECFQINGLLVLNYSRTQAW 112          
BLAST of mRNA_P-littoralis_Contig85.113.2 vs. uniprot
Match: A0A485KW31_9STRA (Ubiquitin-like protein ATG12 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW31_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.780e-20
Identity = 41/91 (45.05%), Postives = 60/91 (65.93%), Query Frame = 0
Query:  140 PPTPEKVKVHFKPIANAPILRKSKFQVNATWTCSELESSLRNMLQISDTTPLFLYCNSAFEPSPDQSLSDLYKCFNVNKELLMSYSITEAW 230
            P  PEKV + F  +  API+++SKF VN     S +   LR  L++ D   LF+YCN+AF P+PDQ +S+L++CF +N  L+++YS T AW
Sbjct:   24 PTGPEKVTIQFMAVGGAPIMKRSKFTVNGADPLSHVYIFLRKQLRLKDEDSLFVYCNNAFAPTPDQRMSELFECFQINGALVLNYSRTHAW 114          
BLAST of mRNA_P-littoralis_Contig85.113.2 vs. uniprot
Match: A0A8J2SMP5_9STRA (Ubiquitin-like protein ATG12 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMP5_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.730e-19
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 0
Query:  134 GGRIAPPPTPEKVKVHFKPIANAPILRKSKFQVNATWTCSELESSLRNMLQISDTTPLFLYCNSAFEPSPDQSLSDLYKCFNVNKELLMSYSITEAW 230
            G   AP P PE+VK+HFK + +AP+LRK K  VN T     +++ L   LQ+  T  LFLYC+SAF P P + +  LY CF    EL+++Y+ T A+
Sbjct:   10 GAEAAPQPPPERVKLHFKAVGSAPLLRKPKLTVNGTEPFHAVQTFLAKQLQLPQTERLFLYCDSAFSPVPTEPVGHLYACFGRGGELVVNYATTGAY 106          
BLAST of mRNA_P-littoralis_Contig85.113.2 vs. uniprot
Match: A0A4P9YW55_9FUNG (Ubiquitin-like protein ATG12 (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YW55_9FUNG)

HSP 1 Score: 88.2 bits (217), Expect = 3.790e-19
Identity = 40/85 (47.06%), Postives = 60/85 (70.59%), Query Frame = 0
Query:  146 VKVHFKPIANAPILRKSKFQVNATWTCSELESSLRNMLQISDTTPLFLYCNSAFEPSPDQSLSDLYKCFNVNKELLMSYSITEAW 230
            V V F+   NAPIL++++FQ+NA+     +   LR  L++    PLFLY NS F P+PD+ +S+L+KCFNV+ +L+++YSIT AW
Sbjct:    1 VPVRFRAAGNAPILKENRFQINASHRFHTVAVFLRKELRLKPQDPLFLYINSVFAPAPDEVMSNLHKCFNVDGQLIINYSITPAW 85          
BLAST of mRNA_P-littoralis_Contig85.113.2 vs. uniprot
Match: A0A7S3UTE6_HETAK (Ubiquitin-like protein ATG12 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTE6_HETAK)

HSP 1 Score: 89.4 bits (220), Expect = 3.860e-19
Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 0
Query:  145 KVKVHFKPIANAPILRKSKFQVNATWTCSELESSLRNMLQISDTTPLFLYCNSAFEPSPDQSLSDLYKCFNVNKELLMSYSITEAW 230
            KV++ FK + NAPI++K+KF + +     ++   LRN L++  T  LFLY N AF PSPDQ++S LY+CF +  EL+++YSI  AW
Sbjct:   38 KVRLQFKAVGNAPIMKKNKFLIGSHEKFQQVMVFLRNQLKLPPTESLFLYINGAFAPSPDQTISSLYECFQIQGELILNYSIVGAW 123          
BLAST of mRNA_P-littoralis_Contig85.113.2 vs. uniprot
Match: A0A024GLR7_9STRA (Ubiquitin-like protein ATG12 n=7 Tax=Albugo candida TaxID=65357 RepID=A0A024GLR7_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.220e-18
Identity = 41/83 (49.40%), Postives = 58/83 (69.88%), Query Frame = 0
Query:  148 VHFKPIANAPILRKSKFQVNATWTCSELESSLRNMLQISDTTPLFLYCNSAFEPSPDQSLSDLYKCFNVNKELLMSYSITEAW 230
            + F  + NAP+L+K+KF +NA  T S +   LR  LQ+ D+  LFLYCN AF P+PDQ L DL KCF+++  L+++YS+T AW
Sbjct:  220 LQFVAVGNAPLLQKTKFTINANDTLSVVYDFLRKQLQLRDSDALFLYCNRAFAPAPDQLLFDLAKCFSIDNVLILNYSLTHAW 302          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig85.113.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0N6_ECTSI2.870e-10470.21Ubiquitin-like protein ATG12 n=1 Tax=Ectocarpus si... [more]
A0A835ZER3_9STRA1.690e-2755.29Ubiquitin-like protein ATG12 (Fragment) n=1 Tax=Tr... [more]
A0A7S2CZJ6_9STRA3.420e-2546.67Ubiquitin-like protein ATG12 n=1 Tax=Dictyocha spe... [more]
F0WHJ6_9STRA7.410e-2150.00Ubiquitin-like protein ATG12 n=1 Tax=Albugo laibac... [more]
A0A6G0WMC5_9STRA2.630e-2045.05Ubiquitin-like protein ATG12 n=1 Tax=Aphanomyces e... [more]
A0A485KW31_9STRA2.780e-2045.05Ubiquitin-like protein ATG12 n=1 Tax=Aphanomyces s... [more]
A0A8J2SMP5_9STRA1.730e-1944.33Ubiquitin-like protein ATG12 n=1 Tax=Pelagomonas c... [more]
A0A4P9YW55_9FUNG3.790e-1947.06Ubiquitin-like protein ATG12 (Fragment) n=1 Tax=Sy... [more]
A0A7S3UTE6_HETAK3.860e-1946.51Ubiquitin-like protein ATG12 n=1 Tax=Heterosigma a... [more]
A0A024GLR7_9STRA2.220e-1849.40Ubiquitin-like protein ATG12 n=7 Tax=Albugo candid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007242Ubiquitin-like protein Atg12PFAMPF04110APG12coord: 145..230
e-value: 6.1E-26
score: 90.7
IPR007242Ubiquitin-like protein Atg12PANTHERPTHR13385AUTOPHAGY PROTEIN 12coord: 140..230
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 7..114
e-value: 5.4E-15
score: 57.2
NoneNo IPR availableGENE3D3.10.20.90coord: 142..230
e-value: 7.2E-27
score: 95.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..100
NoneNo IPR availableCDDcd01612Ubl_ATG12coord: 145..230
e-value: 1.32762E-34
score: 116.847
IPR029146CST complex subunit Ten1, animal and plant typePFAMPF15490Ten1_2coord: 8..84
e-value: 9.2E-15
score: 54.4
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 144..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig85contigP-littoralis_Contig85:435322..438745 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig85.113.2mRNA_P-littoralis_Contig85.113.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig85 435322..439624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig85.113.2 ID=prot_P-littoralis_Contig85.113.2|Name=mRNA_P-littoralis_Contig85.113.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=232bp
MDLTDLTIQPGKVHLVREILHDGITGSVRVLGSLKSYDAAAAVAVVEYKG
HELSIDASLLTDFQFRTDSLYEFIGEIQARSREKGESAREGGREGGREGG
RETCIMAFNVQQKSSEETAWKRGVMEDLPKQEGGGRIAPPPTPEKVKVHF
KPIANAPILRKSKFQVNATWTCSELESSLRNMLQISDTTPLFLYCNSAFE
PSPDQSLSDLYKCFNVNKELLMSYSITEAWV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007242Atg12
IPR012340NA-bd_OB-fold
IPR029146Ten1_animal_plant
IPR029071Ubiquitin-like_domsf