mRNA_P-littoralis_Contig85.102.8 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig85.102.8 vs. uniprot
Match: A0A6H5L0D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D2_9PHAE) HSP 1 Score: 1195 bits (3092), Expect = 0.000e+0 Identity = 932/1769 (52.69%), Postives = 1104/1769 (62.41%), Query Frame = 1
Query: 181 VALAARCAAKEAEMNKVERRLVLLIEKIEASSKRLPKRPSVNGDQLRAEIKSIDTKLTTTSMKLIEEKNLLRRKDSIKTRLKDLAGFESCQKDVQALKDQRGALIAEKRDKAAQVAEMKQGLRRLRLAGRLGVAARELAQESIEVPCEAIGRVIGKKRATLAQLEDECQVSIAEEIVRFEFVAPPRHPGASATNSAHRSGXXXXXXDTLVLRLSGTREGVDEAHRRLDLTIRTTEAIVEAPPPLAAALRVGKRALLLRLEEEFQVKIF-VGSAIVFVACGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------VEVTIRGVPENVDTARMYLAKLDCLELVVPVERKSLSAIFGAGGANLQQMESDYSVSLEVLTSVPRVVLMGVREDVEAAAEKIRDISHEFRETEERWPVEPYQVKFLLRNRGGELRAITQRVGGGVMISVGKG---RAPGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVAAKTQSLAASHVSVRGTAPKVSAAGALLLERLKVAERLAATVSISEEAVPTFVGHAGSAIRKLRRLCVGCEVDLSPVAGGVAEVSLLAEDEAKLGTALGLVERWIRQQQLRVVTVGAETAAMLRTFRATGVRDKIIGADRRQEGPGPGV------------------------EGGDGEDLFGGVVMDSLVAEGVVRLRGGDKELDRAERLIREFQAENWTTETPVGLDDEDALVRRGLLRNVQAKEPEVNFQFFRERGVVVVRGKQEAAERAAGMLQSALHGGGT-DGNGEPLLSVSLVPLAPSGMKLLSARGRLHLKRLSKETGTEVDAVPSASVVRIRARGQDAAAAVAGARRSLLRFVGSQQVEVFVDLATVSSSDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGXXXXXXDGGVLPSTRKASAVVHS--RSVSNDTIRRSVALHGCEAEFVSVSSLLAPADGRTDGGVEGXXXXHRNRXXXXXDGAAXXXXXXENKQRHAAQSNKPXXXXXXXXXXXXXXXXXXXTGGPGVGAGAIPASTVA--------------PRNVQSRGVCIRGPPGLVENARNALVALVLGRQESEIALGVGAAAALGADNWVRIQKSNQDVSIKPNSSRCSLELCGPPSAVEKSRRELYAMLGDVFPGQFQVVPIPRDALLEVASSLSLADAAAA------ATPTASD--RRVAAAAETAEMLGPVGAAAAAGGWVGEANVQLSTDWPCSCVRVKGGVAAVRVAIEAIYSALSKWSALEVTAEVESWMVPALYGKQGKAIKKLSQGMGGIVLKVRDGICRGRATSPEAAREASEKLRERVKELRARRAVVKVPPEVLSQLTGRGNGSMGKLKDRTHATIEIQHCGGGEGSTSEVLISGNSIGVAAAKREVEALVRGAAKNDPAAARAHQAKQNAGNALLPPDKASAEPSPTSPFLPFIRGDTPHSSPLPSPXXXXXXXXXXXXXXXXXXXXXCKSNGGDVCVTGDDRGKVDPASPARSEAAVAAEAADSAVKVDSARNSKCNPEDKQRVAGEPP----------PARIINPPINSGKT---------------------------ISFGS--FKTKA-NSPTGSSDPNLTVVGGEPAVS-----TTTAHSIAAKCSPPSNPRGRGGAGIKRVSAATDSEAERLLASLLLVDSATVPAAVAAAAVGVPTGRSKSSPNQREGFPVAAATSSVSAGLHR 5166
+AL ARC A E E++++E+ V + +KIEA KRLPKRP +NGDQLRAE++SID KLTTTSMKL+EEK LLRRKDSIK RLKDLA +E Q+DVQALKDQR L EKRDK AQ+AEM+QGLRRLRLA RLGVA R+LAQESIEVP EA GRVIGKKRA L QLE+EC+V I E R + XXXXXXDTL+L LSGTREGV+EA RRLD+TIRTTEA+V+A P LAAALR +RALLLRLE+E VKIF VG A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+VT+ G+P+ +D AR L LDCLEL VPV RK+L +IFG+GGANLQQMES+Y V L+V T V RVVLMGVR VEAAAEKIR ISHEFR+TEERWPVEPYQV FLLRNRG EL+ + RVGGGVM+++ +G + P +QS S V VRG AP+VSAAG LLLERLK AE L A V++ E+ V TFVGHAGS IRKLRRLCVGC++ LSP GVAEV LLA+DEA+L A+GLVE+W+ QQ+R+V VG++ A MLRTFRA GVRD+I GA+RRQ+G G EGGD +DLFGGV+MDSLVAEG+VRLRGGD+ELDRAERL+REF+A+NWTTE PV + DED L R+G LR +QA E +VN + R+RGVVVVRG+QE AE AA L LHGGG D NG P SVSLV +APSGM++L+ARGRLHLKRLS +TGTE+ +P+ASVVRIRARG+DA V+ A+R+LLRF+G + EVF+DLA V S D S XXXXXXXXXXXXXXXXXXXXXXXXXXXX DGGV S A V + SVSN IRR+V LHGCE EFV+ P+ XXXX XXXXX XXXXXX + R+ + P GG G G GAI + A + +R V IRG PG V+ AR+ALVALVLG ++ E+ALG AAALGAD+W +IQ S+ V+I P+ SRCSL + GPP+AVE R+ELY ML D G+F VPIPR+AL EVA+SL LADAA ++P D R AAA + AE+LGP G A+AA GW GE NVQL DWPCSCVRV+G AAV VA++ I +ALS WSAL VTAEVE WM P L GKQ KAIKKLSQ MGG+VL V DG+C GRA S E AR+A+ KL ERV ELRARRAVV+VPPEV+SQLTGR S+ KLK+RT ATI I+ GG+ E +I G+ VAAAK EVEA+ RG +K+ PA + + G+ PD A+ +PSP L G+ + PSP + GG V DR + D A+ + AVA D + ED++RV E P AR P SG T GS F+T A ++P DP V EPA S ++++ AK S S+ RGR G +RVSAAT+SEAERLLASLLLVD+A AA VG P +S+ SP REG AAAT+ V AGL +
Sbjct: 1 MALEARCGAMELEVDELEKSWVQMNDKIEAVIKRLPKRPGINGDQLRAEMRSIDIKLTTTSMKLVEEKTLLRRKDSIKARLKDLAAYELAQQDVQALKDQRAMLFTEKRDKTAQMAEMRQGLRRLRLADRLGVAPRDLAQESIEVPREATGRVIGKKRAALTQLEEECRVLIVTENNRVCGSTAAARIWPDKPHGXXXXXXXXXXXDTLILHLSGTREGVEEARRRLDVTIRTTEAVVKASPALAAALRASRRALLLRLEKEHGVKIFIVGPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQVAVDVTVCGLPKGIDAARAELEGLDCLELAVPVTRKALPSIFGSGGANLQQMESEYGVCLDVQTGVSRVVLMGVRAGVEAAAEKIRAISHEFRDTEERWPVEPYQVSFLLRNRGAELKGMAHRVGGGVMMTILEGAKTKGPAAAPTLPAAALLEGEGEDVDEAPHSPEEEVKEGRGG------------SQSTT-SFVWVRGAAPRVSAAGVLLLERLKAAEHLTAKVAVREDIVSTFVGHAGSEIRKLRRLCVGCDLGLSPATDGVAEVLLLADDEARLAAAVGLVEKWVHHQQVRMVAVGSKIAGMLRTFRAAGVRDRITGANRRQKGSGTSXXXXXXXXXXXXXXNDGGRARGDAGEGGDPDDLFGGVIMDSLVAEGMVRLRGGDEELDRAERLVREFEADNWTTEAPVAISDEDVLFRKGFLRKMQANETDVNLHYLRDRGVVVVRGRQEHAESAAASLLWKLHGGGELDENGMPPCSVSLVAVAPSGMEVLTARGRLHLKRLSADTGTEMHVIPAASVVRIRARGRDAGV-VSEAKRALLRFLGGHRAEVFLDLAKVVS-DASPPAQHSSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGR------------------DGGVGASAADAKKAVRTPVSSVSNKIIRRTVKLHGCEVEFVAAPP---PSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERHRNGPYKSGPGRQD---------------AGGRGAGVGAITTADDAHDDGSLSAVTGVSYTSSAPARMVMIRGLPGQVDKARDALVALVLGWEDGEVALGEEGAAALGADSWRKIQDSSGRVTITPDKSRCSLRVSGPPAAVEACRKELYTMLADASRGKFVAVPIPREALHEVATSLRLADAAXXXXXXXXSSPKTGDGKRTAAAAGQIAEVLGPTGIASAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEINTALSMWSALTVTAEVEEWMEPELLGKQRKAIKKLSQSMGGVVLNVVDGVCCGRAASEEEARDATRKLEERVNELRARRAVVRVPPEVVSQLTGRRGCSIDKLKERTRATICIEEGVGGK----EFIICGDPAAVAAAKLEVEAMARGPSKSGPATQAPNNRQSQDGSV---PD-AAGDPSP---LLSPSPGEGVPQTGTPSPLPPSRQNQNQQHAGNT-------AGGGGQDVDLADRRECD-ATAGSVKTAVAVPKLDG-------EGYRRGVEDQERVGEEQPLVVTPPGGGGDARQAPGPSASGSTGRPLGARDASXXXXXXXXXXXXXXXXXXXAGSEGFETNARDNPRSGGDP--AGVAAEPAGSPAPAVVSSSNHYPAKGSSASSYRGRLGERDRRVSAATESEAERLLASLLLVDNA-------AADVGPPMDQSRLSPGHREG---AAATTGVGAGLRQ 1680
BLAST of mRNA_P-littoralis_Contig85.102.8 vs. uniprot
Match: D7FTS7_ECTSI (KH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS7_ECTSI) HSP 1 Score: 606 bits (1562), Expect = 2.080e-190 Identity = 497/999 (49.75%), Postives = 588/999 (58.86%), Query Frame = 1
Query: 2170 VMDSLVAEGVVRLRGGDKELDRAERLIREFQAENWTTETPVGLDDEDALVRRGLLRNVQAKEPEVNFQFFRERGVVVVRGKQEAAERAAGMLQSALHGGGT-DGNGEPLLSVSLVPLAPSGMKLLSARGRLHLKRLSKETGTEVDAVPSASVVRIRARGQDAAAAVAGARRSLLRFVGSQQVEVFVDLATVSSSDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGXXXXXXDGGVLPSTRKASAVVHS--RSVSNDTIRRSVALHGCEAEFVSVSSLLAPADGRTDGGVEGXXXXHRNRXXXXXDGAAXXXXXXENKQRHAAQSNKPXXXXXXXXXXXXXXXXXXXTGGPGVGAGAIPA--------STVAPRNVQ------SRGVCIRGPPGLVENARNALVALVLGRQESEIALGVGAAAALGADNWVRIQKSNQDVSIKPNSSRCSLELCGPPSAVEKSRRELYAMLGDVFPGQFQVVPIPRDALLEVASSLSLADAAAA------ATPTASD--RRVAAAAETAEMLGPVGAAAAAGGWVGEANVQLSTDWPCSCVRVKGGVAAVRVAIEAIYSALSKWSALEVTAEVESWMVPALYGKQGKAIKKLSQGMGGIVLKVRDGICRGRATSPEAAREASEKLRERVKELRARRAVVKVPPEVLSQLTGRGNGSMGKLKDRTHATIEIQHCGGGEGSTSEVLISGNSIGVAAAKREVEALVRGAAKNDPAAARAHQAKQNAGNALLPPDKASAEPSPTSPFLPFIRGDTPHSSPLPSPXXXXXXXXXXXXXXXXXXXXXCKSNGGDVCVTGDDRGKVDPASPARSEAAVAAEAADSAVKVDSARNSKCNPEDKQRVAGEPPPARIINPPINSGKTISFGSFKTKANSPTGSSDPNLTVVGGEPAVSTTTAHSIAAKCSPPSNPRGRGGAGIKRVSAATDSEAERLLASLLLVDSATVPAAVAAAAVGVPTGRS 5091
+MDSLVAEG+VRLRGGD+ELDRAERL+REF+A+NWTTE PV + DED L+R+G LRN+QA + +VN F R+RGVVVVRG+Q+ AE AA +L S LHGGG D NG P SVSLV +APSGM++L+ARGRLHLKRLS +TGTE+ +P ASVVRIRARG+D A VA A R+LLRFVG + EVF+DLA V S D S XXXXXXXXXXXXXXX XXXXXXXXX DGGV S A V + SVSN IRR+V LHGCEAEFV+ P T G XXXX XXXXX XX + RH + P GG G G GA S A V +R V IRG PGLV+ AR+ALVALVLGR++ E+ALG AAAALGAD+W +IQ S++ V+I P+ SRCSL + GPP+AVE RRELY ML D F G+F VPIPR+AL EVA+ L LADAAA ++P D R AAA + AE+LGP+G AAAA GW GE NVQL DWPCSCVRV+G AAV VA+ I +ALSKWSAL V AEVE WM P L+GKQ KAIKKLSQ MGG+VL V DG+C GRA S E AR+A+ KL ERV ELRARRAVV+VPPEV+++LTGRG S+ K+K+RT ATI I GG +EV+I G+ VAAA+REVEA+ RG +K+ PAA +A + +Q+ + PD A+ +PSP LP G+ + PS XXXXXXX GG D RG EA +VK AG PPPA VVGG + AK S S+ RGR G RVSAAT+SEAERLLASLLLVD+ AA VG +GRS
Sbjct: 1 MMDSLVAEGMVRLRGGDEELDRAERLVREFEADNWTTEAPVAISDEDVLLRKGFLRNMQANQTDVNLHFLRDRGVVVVRGRQKHAESAATLLLSKLHGGGELDENGMPPCSVSLVAVAPSGMEVLTARGRLHLKRLSADTGTEMHVIPPASVVRIRARGRDPEA-VAEATRALLRFVGGHRAEVFLDLAKVES-DASPPAXXXXXXXXXXXXXXXGKAGAEAMQEVVXXXXXXXXXVGR-----------------DGGVGASAADAKKAVRTPVSSVSNKIIRRTVKLHGCEAEFVAAPPPSPPVSSNTASGGRXXXXXXXXXXXXXX--------XXXXRHRHGPHKSGPGRQD---------------AGGRGAGVGATTTADDTHDDGSLSAVTGVSYTSSAPARRVMIRGLPGLVDKARDALVALVLGREDGEVALGEEAAAALGADSWRKIQDSSERVTITPDRSRCSLRVSGPPAAVEACRRELYTMLADAFRGEFVAVPIPREALHEVATPLRLADAAAXXXXXXXSSPRTGDGKRTAAAAGQIAEVLGPMGVAAAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVGEINTALSKWSALAVAAEVEEWMEPELFGKQRKAIKKLSQSMGGVVLNVVDGVCSGRAASEEEARDATRKLEERVSELRARRAVVRVPPEVVTRLTGRGGCSIDKIKERTRATIRIGEGVGG----NEVIICGDPSAVAAARREVEAMARGPSKSSPAA-QAPKDRQSPDGGV--PD-AAGDPSP---LLPPSPGEGVPQTGTPS------XXXXXXXNQNQLHAGNAAGGGGQDVDLADRRG---------------GEATAGSVKT-------------AEPAGSPPPA----------------------------------VVGGS---------NHPAKGSSASSYRGRLGERDTRVSAATESEAERLLASLLLVDNV-------AADVGRLSGRS 862
BLAST of mRNA_P-littoralis_Contig85.102.8 vs. uniprot
Match: D7FTS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS6_ECTSI) HSP 1 Score: 560 bits (1442), Expect = 2.100e-178 Identity = 384/615 (62.44%), Postives = 440/615 (71.54%), Query Frame = 1
Query: 181 VALAARCAAKEAEMNKVERRLVLLIEKIEASSKRLPKRPSVNGDQLRAEIKSIDTKLTTTSMKLIEEKNLLRRKDSIKTRLKDLAGFESCQKDVQALKDQRGALIAEKRDKAAQVAEMKQGLRRLRLAGRLGVAARELAQESIEVPCEAIGRVIGKKRATLAQLEDECQVSIAEEIVRFEFVAPPRHPGASATNSAHRSGXXXXXXDTLVLRLSGTREGVDEAHRRLDLTIRTTEAIVEAPPPLAAALRVGKRALLLRLEEEFQVKIFVGSAIVFVACGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVTIRGVPENVDTARMYLAKLDCLELVVPVERKSLSAIFGAGGANLQQMESDYSVSLEVLTSVPRVVLMGVREDVEAAAEKIRDISHEFRETEERWPVEPYQVKFLLRNRGGELRAITQRVGGGVMISV---GKGRAPGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVAAKTQSLAASHVSVRGTAPKVSAAGALLLERLKVAERLAATVSISEEAVPTFVGHAGSAIRKLRRLCVGCEVDLSPVAGGVAEVSLLAEDEAKLGTALGLVERWIRQQQL 2016
+AL ARC A E +++++E+ VL+ +KIEA KRLPKRP +NGDQLRAE++SIDTKLTTTSMKL++EK LLRRKD+IK RLKDLA +E Q+DVQALKDQR L AEKRDK AQ+AEM+QGLRRLRLA RLGVA R+LAQESIEVP EA GRVIGKKRA L QLE+EC+VSI E V SGTREGV+EA RRLD+TIRTTEA+V+A PPLAAALR KRALLLRLE+E VKIF+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+VT+ G+P+ +D AR L LDCLEL VPV RKSL +IFG+GGANLQQMES+Y V L+V T V RVVLMGVR VEAAAEKIR ISHEFR+TEERWPVEPYQV FLLRNRG EL+ + RVGGGVM+++ +AP XXXXXXXXXXXXXX T S V VRGTAP+VSAAG LLLERLK AERL A V++ E+ V TFVGHAGS IRKLRRLCVGC++ LSP GVAEV LLA+DEA+L A+GLVE+W+ QQ+
Sbjct: 1 MALEARCGAMELQVDELEKGWVLMNDKIEAVIKRLPKRPGINGDQLRAEVRSIDTKLTTTSMKLVDEKTLLRRKDNIKARLKDLAAYELAQQDVQALKDQRAVLFAEKRDKTAQMAEMRQGLRRLRLADRLGVAPRDLAQESIEVPREATGRVIGKKRAALTQLEEECRVSIVTENV------------------------------------SGTREGVEEARRRLDITIRTTEAVVKASPPLAAALRASKRALLLRLEKEHGVKIFIVGPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGQVAVDVTVCGLPKEIDAARAELEGLDCLELAVPVTRKSLPSIFGSGGANLQQMESEYGVCLDVQTGVSRVVLMGVRAGVEAAAEKIRAISHEFRDTEERWPVEPYQVSFLLRNRGAELKGMAHRVGGGVMMTILEEANTKAPAAAPTLPAASLSEGEGEEINEARHPPXXXXXXXXXXXXXXQSTT----------SFVWVRGTAPRVSAAGVLLLERLKAAERLTAKVAVREDVVSTFVGHAGSEIRKLRRLCVGCDLGLSPATDGVAEVLLLADDEARLAAAVGLVEKWVHHQQI 569
BLAST of mRNA_P-littoralis_Contig85.102.8 vs. uniprot
Match: A0A835Z3V4_9STRA (KH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V4_9STRA) HSP 1 Score: 106 bits (265), Expect = 8.390e-21 Identity = 75/257 (29.18%), Postives = 131/257 (50.97%), Query Frame = 1
Query: 178 EVALAARCAAKEAEMNKVERRLVLLIEKIEASSKRLPKRPSVNGDQLRAEIKSIDTKLTTTSMKLIEEKNLLRRKDSIKTRLKDLAGFESCQKDVQALKDQRGALIAEKRDKAAQVAEMKQGLRRLRLAGRLGVAARELAQESIEVPCEAIGRVIGKKRATLAQLEDECQVSIAEEIVRFEFVAPPRHPGASATNSAHRSGXXXXXXDTLVLRLSGTREGVDEAHRRLDLTIRTTEAIVEAPPPLAAALRVGKRALL 948
+VA+A++ A + E + +E +++ +++A+ KRLP+RP +L EI ++ +T SM L +EK +LR++D + ++KD+ +KD++AL+D+ GALI E + +V E+ +GL ++ LA + GV +L ++ VP + IGR+IG+ RA LA LE +C V E X + + +S + D A R+ I T ++ + + AAL+V A L
Sbjct: 90 KVAVASKLAEAQGERSALEVKILETRHRVDAARKRLPRRPREAEKELEDEIAKLEFYRSTNSMSLSKEKEVLRQQDQARAKIKDIKERARQEKDIEALQDKVGALIEESKANTEKVNELSRGLAKVHLAVKAGVGVADLVTATVHVPSDKIGRIIGRSRAALADLEKDCGVVCRERSSSSSGXXXXXXXXXXXXXXXXXXXATNGGXXXIAIDVSXXQAXXDAACARVRAAIATVDSKIAISADVVAALKVSSSAQL 346
BLAST of mRNA_P-littoralis_Contig85.102.8 vs. uniprot
Match: A0A7S2V6C2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C2_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.850e-18 Identity = 82/293 (27.99%), Postives = 130/293 (44.37%), Query Frame = 1
Query: 3460 ALGADNWVRIQKSNQDVSIKPNSSRCSLELCGPPSAVEKSRRELYAMLGDVFPGQFQVVPIPRDALLEVASSLSLADAAAAATPTASDRRVAAAAETAEMLGPVGAAAAAGGWVGEANVQLSTDWPCSCVRVKGGVAAVRVAIEAIYSALSKWSALEVTAEVESWMVPALYGKQGKAIKKLSQGMGGIVLKVRDGICRGRATSPEAAREASEKLRERVKELRARRAVVKVPPEVLSQLTGRGNGSMGKLKDRTHATIEIQHCGGGEGSTSEVLISGNSIGVAAAKREVEALVR 4338
A G NW RI+ ++ V+++ + + +++ G V ++RE Y ML +FP QF VP+P A VAS+ L + A A + L D CSC+RV+G A A AI +A+++W V+ WM+P + GK G+ I KL G + +RD + + S EA + A E L +++ R +K+ P+ + L G+G ++ K+++ T ATI GG + I G VA K VEA +
Sbjct: 242 ATGDANWRRIRAAHS-VTVELDKNENEIKIRGRADDVPNAQRETYQMLDFLFPNQFHHVPVPSQAFSTVASTARLGEVLALAE----------------------------------GLALKPDRACSCIRVRGPSEAADQAKAAIEAAVAEWERCNARLSVQDWMLPLIIGKGGQHISKLQSESGCSIDVLRDLMVVHISGSEEAVKSAKETLEGIIEKARKENVELKIDPDSIGSLIGKGGENIRKIQEETGATINTDRNGG------RLRIRGPEEAVARCKEVVEAFAK 493
BLAST of mRNA_P-littoralis_Contig85.102.8 vs. uniprot
Match: W7TEY7_9STRA (High density lipoprotein binding protein vigilin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEY7_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.930e-14 Identity = 85/269 (31.60%), Postives = 131/269 (48.70%), Query Frame = 1
Query: 184 ALAARCAAKEAEMNKVERRLVLLIEKIEASSKRLPKRPSVNGDQLRAEIKSIDTKLTTTSMKLIEEKNLLRR---KDSIKTRLKDLAGFESCQKDVQALKDQRGALIAEKRDKAAQVAEMKQGLRRLRLAGRLGVAARELAQESIEVPCEAIGRVIGKKRATLAQLEDECQVSIAEEIVRFEFVAPPRHPGASATNSAHRSGXXXXXXDTLVLRLSGTREGVDEAHRRLDLTIRTTEAIVEAPPPLAAALRVGKRALLLRLEEEFQVKI 981
ALA AA + E+ KVE RL EA + P RP + +L +K ++ K TT SM L+EEK LLR+ K R+K+ + E KD++ LK Q L E++ K + E+ + LR+++LA R+GVAA EL +E++EVP E++ RV+G+ L ++E+ C+VS+ + H G ++SGT G A ++ + + PP LA+ L G+ L E QV+I
Sbjct: 16 ALAGDKAAIQKELAKVEERLQ------EAYQGQGP-RPRESEAELDKAMKDLEYKRTTQSMSLMEEKKLLRQIGLYKKEKMRIKEYSLVEDGLKDLKVLKSQ---LYEERKAKEGAMVELSKALRKMQLAQRVGVAAEELVEETLEVPEESMSRVVGRGGVNLRRIEETCRVSL---------------------DFNHGRGGSG--------KVSGTAAGCAMAKEQIQEIVAAVSEEIAVPPTLASTLLAGRAVKTQALMREHQVRI 245
BLAST of mRNA_P-littoralis_Contig85.102.8 vs. uniprot
Match: A0A7S2SDW4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SDW4_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 4.150e-5 Identity = 39/115 (33.91%), Postives = 61/115 (53.04%), Query Frame = 1
Query: 352 TTTSMKLIEEKNLLRRKDSIKTRLKDLAGFESCQKDVQALKDQRGALIAEKRDKAAQVAEMKQGLRRLRLAGRLGVAARELAQESIEVPCEAIGRVIGKKRATLAQLEDECQVSI 696
T S+KL EEK +LR+ SI+ LA F ++ VQ K + AL R AQ+AE++ + ++ LA RLG + +L + P + +G IGK + + Q+E + V I
Sbjct: 1 TECSLKLSEEKAILRQIKSIERAKTQLAEFHEQERAVQKKKAEVSALRDSLRTTIAQIAELETAISKVELAKRLGCSTADLRTHKADCPSDKLGSFIGKNGSNIKQIEKKTGVKI 115 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig85.102.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig85.102.8 >prot_P-littoralis_Contig85.102.8 ID=prot_P-littoralis_Contig85.102.8|Name=mRNA_P-littoralis_Contig85.102.8|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1739bp MSEVALAARCAAKEAEMNKVERRLVLLIEKIEASSKRLPKRPSVNGDQLRback to top mRNA from alignment at P-littoralis_Contig85:398143..412208+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig85.102.8 ID=mRNA_P-littoralis_Contig85.102.8|Name=mRNA_P-littoralis_Contig85.102.8|organism=Pylaiella littoralis U1_48|type=mRNA|length=14066bp|location=Sequence derived from alignment at P-littoralis_Contig85:398143..412208+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig85:398143..412208+ >mRNA_P-littoralis_Contig85.102.8 ID=mRNA_P-littoralis_Contig85.102.8|Name=mRNA_P-littoralis_Contig85.102.8|organism=Pylaiella littoralis U1_48|type=CDS|length=5217bp|location=Sequence derived from alignment at P-littoralis_Contig85:398143..412208+ (Pylaiella littoralis U1_48)back to top |