mRNA_P-littoralis_Contig85.55.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig85.55.1
Unique NamemRNA_P-littoralis_Contig85.55.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig85.55.1 vs. uniprot
Match: D7FTR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTR2_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 1.320e-157
Identity = 221/243 (90.95%), Postives = 233/243 (95.88%), Query Frame = 2 
Query:  368 MSFPTGNKPVKEIDNPRPKLWIYDHCPYCIRPRMVLGLKGITHDLAYLSNDDIETPTAMAGKKVVPILELGRPGSEDHEIMIESLDIVKRLDEDPQFGPPALAPAADRKDIDGWISSAAMLMRRLVRPRNAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKDSPKLIEELERELWKLEGMIHSSTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDIPLHDKISS 1096
            M FPTG+KPVKE+D+PRPKLWIYDHCPYC+RPRMV GLKGITHDLAYLSNDDIETPTAM GKK+VPILELGRPGSEDHEIM ES+DIVKRLD DPQFGPP LAPA DRKD+DGW+SSAAMLMRRLVRPRNAVTPL EFQTRSAREAFVRNHPLPEPSSYEANLK SPKLIEELERELWKLEGMIHS TSVAADGKLSYND+EFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVD+PL+DKI+S
Sbjct:    1 MPFPTGSKPVKEMDSPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSEDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDGWVSSAAMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDVEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPLYDKIAS 243
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BLAST of mRNA_P-littoralis_Contig85.55.1 vs. uniprot
Match: A0A6H5J619_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J619_9PHAE)

HSP 1 Score: 458 bits (1178), Expect = 6.010e-157
Identity = 241/318 (75.79%), Postives = 260/318 (81.76%), Query Frame = 2 
Query:  143 MPLLLLPTRPRISIFLSAGVIAQLVLRSGVAGFATIPRLPGPARSALSAAPGESLFASSASIITTAVKSGTTTTTMSFPTGNKPVKEIDNPRPKLWIYDHCPYCIRPRMVLGLKGITHDLAYLSNDDIETPTAMAGKKVVPILELGRPGSEDHEIMIESLDIVKRLDEDPQFGPPALAPAADRKDIDGWISSAAMLMRRLVRPRNAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKDSPKLIEELERELWKLEGMIHSSTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDIPLHDKISS 1096
            MP   LP+R  +S FL A  +AQL LR GV G  T+      +  A SA  G  +            +       M FPTG+KPVKEI++PRPKLWIYDHCPYC+RPRMV GLKGITHDLAYLSNDDIETPTAM GKK+VPILELGRPGS+DHEIM ES+DIVKRLD DPQFGPP LAPA DRKD+D W+SSA MLMRRLVRPRNAVTPL EFQTRSAREAFVRNHPLPEPSSYEANLK SPKLIEELERELWKLEGMIHS TSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVD+PL+DKI+S
Sbjct:    1 MPPATLPSRLCLSTFLPAIAVAQLFLRPGVNGL-TLSFPAACSSGARSATAGGPVMXXXXXXXXXXAQDKVA---MPFPTGSKPVKEIESPRPKLWIYDHCPYCVRPRMVFGLKGITHDLAYLSNDDIETPTAMVGKKMVPILELGRPGSDDHEIMAESMDIVKRLDLDPQFGPPVLAPAVDRKDLDSWVSSAGMLMRRLVRPRNAVTPLAEFQTRSAREAFVRNHPLPEPSSYEANLKASPKLIEELERELWKLEGMIHSPTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDVPLYDKIAS 314
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BLAST of mRNA_P-littoralis_Contig85.55.1 vs. uniprot
Match: A0A6V1VKR3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VKR3_HETAK)

HSP 1 Score: 228 bits (581), Expect = 3.680e-67
Identity = 108/226 (47.79%), Postives = 157/226 (69.47%), Query Frame = 2 
Query:  419 PKLWIYDHCPYCIRPRMVLGLKGITHDLAYLSNDDIETPTAMAGKKVVPILELGRPGSEDHEIMIESLDIVKRLDEDPQFGPPALAPAADRKDIDGWISSAAMLMRRLVRPRNAVTPL-PEFQTRSAREAFVRNHPLPEPSSYEANLKDSPKLIEELERELWKLEGMIHSSTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDIPLHDKIS 1093
            P++++YDHCPYC R R++LGLK I H+L +++NDD +TP ++ GKK+ PI E        HE+M ESLDI+ RLD DP++GPP L PA+DR D   WI+   +L  RLV PR A +PL PEF  + ARE +V+ HPLP PS Y+     SP+ +EE+  +L +LE MI S+    A G LS +D+E F R+RGLT+V+GL  PPK++AY++ +S++  +PL+ +++
Sbjct:   88 PRVFLYDHCPYCTRVRIILGLKNIKHELVWMANDDFDTPISLVGKKMAPIFEYNSE-ERGHEVMAESLDIIARLDSDPKWGPPLLRPASDRTDFRNWINDNKVLYNRLVNPRYARSPLIPEFTFQEAREVYVKRHPLPAPSDYDVLFAMSPQFVEEMNEKLLELEPMIFSAEHCTAGG-LSVDDVELFSRLRGLTVVRGLSFPPKVKAYIETMSQKTKVPLYYQLA 311
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BLAST of mRNA_P-littoralis_Contig85.55.1 vs. uniprot
Match: A0A5J4YKV5_PORPP (Glutaredoxin 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKV5_PORPP)

HSP 1 Score: 221 bits (562), Expect = 3.220e-65
Identity = 106/230 (46.09%), Postives = 153/230 (66.52%), Query Frame = 2 
Query:  389 KPVKEIDNPRPKLWIYDHCPYCIRPRMVLGLKGITHDLAYLSNDDIETPTAMAGKKVVPILELGRPGSEDHEIMIESLDIVKRLDEDPQFGPPALA-PAADRKDIDGWISSAAMLMRRLVRPRNAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKDSPKLIEELERELWKLEGMIHSSTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDIP 1075
            +P + + +  P+L++Y HCP+C+R +  LGLK I H+L +L+NDD+ TPTA+ GKKVVPILE+GRPG   HE+M ESLDI+KR+DEDP FGP  L  PA  R+DID WI  +  L RRL+ PR    PLPEF    AR A++RNH +PEP  Y+ N   S +L+ ++   + KL+ ++       ++G +S +D+  F R+R L +++G   PPK++AY+D   +  DIP
Sbjct:   12 QPPRVVPDVLPRLYLYAHCPFCVRVQTALGLKNIKHELVFLANDDVATPTALVGKKVVPILEIGRPGQPGHELMNESLDIIKRIDEDPAFGPTNLIKPATGRQDIDAWIKESKELNRRLISPRYVRVPLPEFFFAEARAAYIRNHAIPEPGDYDTNFAMSAELLPQMNALMAKLDALVFCEQH-CSEGGVSMDDLVLFSRLRSLELLKGAVWPPKVKAYMDHFHQLTDIP 240
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BLAST of mRNA_P-littoralis_Contig85.55.1 vs. uniprot
Match: W7TQ45_9STRA (Glutaredoxin 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ45_9STRA)

HSP 1 Score: 210 bits (535), Expect = 8.080e-61
Identity = 110/224 (49.11%), Postives = 154/224 (68.75%), Query Frame = 2 
Query:  416 RPKLWIYDHCPYCIRPRMVLGLKGITHDLAYLSNDDIETPTAMAGKKVVPILELGRPGSEDHEIMIESLDIVKRLDEDPQFGPPALAPAADRKDIDGWISSAAMLMRRLVRPRNAVTP-LPEFQTRSAREAFVRNHPLPEPS-SYEANLKDSPKLIEELERELWKLEGMIHSSTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDIPLH 1081
            RP L+IYDHCP+C+R R++ GLK I H L +L NDD +TPTA+ GKK+VPILE+     E   +M ES+DIVK +DEDP++GPP L   +DR+DI  +  S A L RR  RPR A++  LPEF T +AR AFVRNHP   P   Y  NL++   L+ +L   L +L+ M+ S   V  +G +SY+D++ F ++RGLT+V GL +PP+L+AY++A  E+ +IPL+
Sbjct:   52 RPNLYIYDHCPFCVRARIIFGLKRIPHQLIFLDNDDADTPTALVGKKMVPILEMIDAQGE-RVVMPESMDIVKLIDEDPRWGPPVLRRGSDREDIKAFFDSIADLSRRCTRPRFALSSVLPEFHTPAARAAFVRNHPFKSPPFDYTENLQNK-SLVADLSARLRELDAMLFSDECVT-EGGVSYDDVDLFGKVRGLTVVAGLVLPPRLKAYVEAFGEKTEIPLY 272
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BLAST of mRNA_P-littoralis_Contig85.55.1 vs. uniprot
Match: A0A0G4EFM6_VITBC (GST N-terminal domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFM6_VITBC)

HSP 1 Score: 208 bits (529), Expect = 3.580e-59
Identity = 111/231 (48.05%), Postives = 154/231 (66.67%), Query Frame = 2 
Query:  419 PKLWIYDHCPYCIRPRMVLGLKGITHDLAYLSNDDIETPTAMAGKKVVPILELG--RPGSEDHEIMIESLDIVKRLDEDPQFGP--PALAPAADRKDIDGWISSAAMLMRRLVRPRNAVTP-LPEFQTRSAREAFVRNHPLPEPSSYEANLKDSPKLIEELERELWKLEGMI-HSSTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDIPLHDKIS 1093
            P+L++YDHCP+C+R RM+ GLK I HDL Y++NDDIETPT + GKK+ PILE+   RPG  +  IM ESLDIVK +DE  + G   P L P + R D+  W+ S A   RRL RPR A +  LPEF   SAR  ++  HPL  PSSYE N + S + I  L   L KL+GMI +      ++G +SY+DI+ FPR+R L+IV+GL  PP ++AY++ +S++ D+ L+ K++
Sbjct:  108 PRLYVYDHCPFCVRARMIFGLKNIKHDLVYMANDDIETPTHLIGKKMAPILEVRGRRPG--EGLIMPESLDIVKYIDESEEIGAGLPLLKPFSGRSDLKEWLDSIAEPSRRLSRPRFAWSANLPEFAFDSARRTYIARHPLENPSSYEENYERSAEWIAALSEGLKKLDGMIANPQEGYISEGGISYDDIDMFPRLRNLSIVKGLEFPPNVKAYIEVLSKKTDVALYTKMA 336
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BLAST of mRNA_P-littoralis_Contig85.55.1 vs. uniprot
Match: A0A7S2XXQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXQ8_9STRA)

HSP 1 Score: 206 bits (523), Expect = 6.040e-59
Identity = 105/225 (46.67%), Postives = 154/225 (68.44%), Query Frame = 2 
Query:  389 KPVKEIDNPRPKLWIYDHCPYCIRPRMVLGLKGITHDLAYLSNDDIETPTAMAGKKVVPILELGRPGSEDHEIMIESLDIVKRLDEDPQFGPPALAPAAD-RKDIDGWISSAAMLMRRLVRPRNAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKDSPKLIEELERELWKLEGMIHSSTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSE 1060
            KP K+  N  P+L+IYDHCP+C+R RM+ GLK I H+L ++S+DD +TP  + GKKV PILE+     +D E+M ES+DIV R+D DP++G P L    + R+D+  W+     L RR +  R+ + PLPEFQ RSARE F++ HPL EPS Y  N  +S  L+EE+ ++L +L+ MI S      DG LSY+DI  F ++R +T+++G+ IPPK++AY++++SE
Sbjct:   66 KPKKK--NYLPQLYIYDHCPFCVRARMIFGLKSIKHNLVFMSSDDWDTPEGLVGKKVAPILEIKHEDGKD-EVMPESMDIVWRIDNDPKYGQPLLKGKPELREDLAQWMKDTRDLFRRALHTRHVMVPLPEFQFRSAREVFIQRHPLAEPSDYNENYYNSA-LVEEMNQKLLELDAMIFSP-ECCTDGGLSYDDIAVFGKLRSVTLIRGIKIPPKMKAYIESMSE 285
[Close]
BLAST of mRNA_P-littoralis_Contig85.55.1 vs. uniprot
Match: A0A7S0M661_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M661_9CRYP)

HSP 1 Score: 204 bits (520), Expect = 1.400e-58
Identity = 109/252 (43.25%), Postives = 156/252 (61.90%), Query Frame = 2 
Query:  392 PVKEIDNPRPKLWIYDHCPYCIRPRMVLGLKGITHDLAYLSNDDIETPTAMAGKKVVPILELGRPGSEDHEIMIESLDIVKRLDEDPQFGPPALAPAADRKDIDGWISSAAMLMRRLVRPRNAVTP-LPEFQTRSAREAFVRNHPLP-----------------EPSSYEANLKDSPKLIEELERELWKLEGMIHSSTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDIPLHDKIS 1093
            P   +  P P+L++YDHCP+C+R R ++G K I H++ +L+NDDIETPT + GKKVVPILE+   G    E+M ES+DIVKR+DEDP FGP  L PA+ RKD+  W      L R L RPR   +  LPEF  ++ R+A+VRNH LP                   + Y   L+ +P L+      + +L GMI +S    ++G LSY+D++ F R+R LTIV+GL +P  +RAYL++++   D+PL+D I+
Sbjct:   32 PALVVGTPVPRLYVYDHCPFCVRVRFIMGFKNIKHNVVFLANDDIETPTKLVGKKVVPILEIPSYG----EVMKESMDIVKRIDEDPTFGPQLLKPASGRKDLSEWQDKHQDLFRLLQRPRYVSSGILPEFSQQAGRDAYVRNHALPPYAKEEWSDDKRLPRAMRYAKYAEALQQTPALLPAAAAAVQELGGMI-ASAQHCSEGGLSYDDVDLFGRLRSLTIVRGLPLPDTVRAYLESMAAAADVPLYDPIA 278
[Close]
BLAST of mRNA_P-littoralis_Contig85.55.1 vs. uniprot
Match: A0A2V3IFN8_9FLOR (Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFN8_9FLOR)

HSP 1 Score: 203 bits (516), Expect = 1.550e-58
Identity = 108/238 (45.38%), Postives = 152/238 (63.87%), Query Frame = 2 
Query:  374 FPTGNKPVKEIDNPRPKLWIYDHCPYCIRPRMVLGLKGITHDLAYLSNDDIETPTAMAGKKVVPILELGRPGSEDHEIMIESLDIVKRLDEDPQFGPPALAPAAD-RKDIDGWISSAAMLMRRLVRPRNAVTPLPEFQTRSAREAFVRNHPLPEPSSYEANLKDSPKLIEELERELWKLEGMIHSSTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDIPLHD 1084
             PT + P + + +P P L++YDHCP+C+R R +LGLK I ++L +L+NDD+ TPTA+ G+KVVPI +   P         ESLDI K +D DP+FG P L  +A  R DI  W+   AM MRRL R R +  PLPEF  + ARE ++RNHPL +P  YE N   S + I +++  L +L  MI+S    +  G LSY+DI  FPR+R LTIV+GL +P +LR Y++  +   +IP++D
Sbjct:    1 MPTPSLPPRVVLSPLPTLYVYDHCPFCVRVRHLLGLKNIKYNLVFLANDDVTTPTALVGRKVVPIFQ---PQGTGGPAQPESLDICKHVDNDPRFGAPGLLKSATPRDDIAKWMDELAMPMRRLSRVRFSRAPLPEFVFQEARETYIRNHPLSDPGDYEDNFDRSTEYITQVQERLDELAEMIYSPEHCSPHG-LSYDDIVLFPRLRTLTIVKGLVLPKRLREYVEFQAAAAEIPVYD 234
[Close]
BLAST of mRNA_P-littoralis_Contig85.55.1 vs. uniprot
Match: A0A813EIR4_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EIR4_POLGL)

HSP 1 Score: 194 bits (494), Expect = 3.450e-54
Identity = 103/251 (41.04%), Postives = 156/251 (62.15%), Query Frame = 2 
Query:  401 EIDNPRPKLWIYDHCPYCIRPRMVLGLKGITHDLAYLSNDDIETPTAMAGKKVVPILELGRPGSEDHEIMIESLDIVKRLDEDPQFGPPALAPAADRKDIDGWISSAAMLMRRLVRPRNAVTPLPEFQTRSAREAFVRNHPLPEP--------------------SSYEANLKDSPKLIEELERELWKLEGMIHSSTSVAADGKLSYNDIEFFPRMRGLTIVQGLGIPPKLRAYLDAVSERVDIPLHDKIS 1093
            +  N  P+L+IYDHCP+C+R R++ G+K I H+L +++NDD++TPTA+ GKK+ PIL+L  PG      M ESLDIV+++D DP +GPP L PA+ R+D+D         +R L+RPR     LPEF  +  R A++RNHP+ +P                    S Y+A+ ++SP L+ EL   L   EG+IHS  SV+  G  SY+DI FF +MR  ++++GL   P+L+AY++ +S+   IPL+  ++
Sbjct:   80 QAGNALPELYIYDHCPFCVRARIIFGMKNIKHNLVWMANDDVDTPTALVGKKISPILQL--PGES---AMFESLDIVRKIDMDPAWGPPLLKPASAREDLDAVDKRTIEAVRLLLRPRVIRAYLPEFAHKDGRTAYLRNHPIADPVGGEVPEKAAWLAMGEEKWKSWYDAHFENSPALLAELNSVLPDFEGLIHSEDSVSPGGA-SYDDIVFFAKMRTASLIKGLKPGPRLQAYMERMSDLSQIPLYSGMA 324
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig85.55.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTR2_ECTSI1.320e-15790.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J619_9PHAE6.010e-15775.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1VKR3_HETAK3.680e-6747.79Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5J4YKV5_PORPP3.220e-6546.09Glutaredoxin 2 n=1 Tax=Porphyridium purpureum TaxI... [more]
W7TQ45_9STRA8.080e-6149.11Glutaredoxin 2 n=2 Tax=Monodopsidaceae TaxID=42507... [more]
A0A0G4EFM6_VITBC3.580e-5948.05GST N-terminal domain-containing protein n=1 Tax=V... [more]
A0A7S2XXQ8_9STRA6.040e-5946.67Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S0M661_9CRYP1.400e-5843.25Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A2V3IFN8_9FLOR1.550e-5845.38Glutaredoxin 2 n=1 Tax=Gracilariopsis chorda TaxID... [more]
A0A813EIR4_POLGL3.450e-5441.04Hypothetical protein n=3 Tax=Polarella glacialis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig85contigP-littoralis_Contig85:259482..266518 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FTR2
PFAMsGST_N_3,Glutaredoxin2_C
Model size1551
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue5.19e-161
EggNOG OGsCOG2999@1|root,2RYF1@2759|Eukaryota
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-14_001150.1
DescriptionGlutaredoxin 2, C terminal domain
Cds size999
COG categoryO
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig85.55.1prot_P-littoralis_Contig85.55.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig85 259934..266418 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791716.8583722-UTR-P-littoralis_Contig85:259481..2599331680791716.8583722-UTR-P-littoralis_Contig85:259481..259933Pylaiella littoralis U1_48UTRP-littoralis_Contig85 259482..259933 -
1680791716.9541898-UTR-P-littoralis_Contig85:266418..2665181680791716.9541898-UTR-P-littoralis_Contig85:266418..266518Pylaiella littoralis U1_48UTRP-littoralis_Contig85 266419..266518 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791716.8720815-CDS-P-littoralis_Contig85:259933..2599551680791716.8720815-CDS-P-littoralis_Contig85:259933..259955Pylaiella littoralis U1_48CDSP-littoralis_Contig85 259934..259955 -
1680791716.8822107-CDS-P-littoralis_Contig85:261353..2615561680791716.8822107-CDS-P-littoralis_Contig85:261353..261556Pylaiella littoralis U1_48CDSP-littoralis_Contig85 261354..261556 -
1680791716.8923185-CDS-P-littoralis_Contig85:261892..2619821680791716.8923185-CDS-P-littoralis_Contig85:261892..261982Pylaiella littoralis U1_48CDSP-littoralis_Contig85 261893..261982 -
1680791716.9053707-CDS-P-littoralis_Contig85:262486..2626661680791716.9053707-CDS-P-littoralis_Contig85:262486..262666Pylaiella littoralis U1_48CDSP-littoralis_Contig85 262487..262666 -
1680791716.9274635-CDS-P-littoralis_Contig85:263812..2639511680791716.9274635-CDS-P-littoralis_Contig85:263812..263951Pylaiella littoralis U1_48CDSP-littoralis_Contig85 263813..263951 -
1680791716.9380395-CDS-P-littoralis_Contig85:266053..2664181680791716.9380395-CDS-P-littoralis_Contig85:266053..266418Pylaiella littoralis U1_48CDSP-littoralis_Contig85 266054..266418 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig85.55.1

>prot_P-littoralis_Contig85.55.1 ID=prot_P-littoralis_Contig85.55.1|Name=mRNA_P-littoralis_Contig85.55.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=333bp
MRIDTPRKHQTAKVMPLLLLPTRPRISIFLSAGVIAQLVLRSGVAGFATI
PRLPGPARSALSAAPGESLFASSASIITTAVKSGTTTTTMSFPTGNKPVK
EIDNPRPKLWIYDHCPYCIRPRMVLGLKGITHDLAYLSNDDIETPTAMAG
KKVVPILELGRPGSEDHEIMIESLDIVKRLDEDPQFGPPALAPAADRKDI
DGWISSAAMLMRRLVRPRNAVTPLPEFQTRSAREAFVRNHPLPEPSSYEA
NLKDSPKLIEELERELWKLEGMIHSSTSVAADGKLSYNDIEFFPRMRGLT
IVQGLGIPPKLRAYLDAVSERVDIPLHDKISS*
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mRNA from alignment at P-littoralis_Contig85:259482..266518-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig85.55.1 ID=mRNA_P-littoralis_Contig85.55.1|Name=mRNA_P-littoralis_Contig85.55.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7037bp|location=Sequence derived from alignment at P-littoralis_Contig85:259482..266518- (Pylaiella littoralis U1_48)
AAATAACTGGTTATTTATTCTTGTCATCTACCATTGGTGTAAACTGGGTA
AAGACTATAATTATTAGATGTCATAGTCTTTGGAACTGGCCGTGCTGGGA
ATGCGCATAGACACCCCTCGAAAACACCAGACAGCGAAGGTGATGCCATT
GCTTCTGCTGCCCACCCGGCCACGCATCTCGATCTTCCTGTCTGCGGGCG
TTATTGCACAGCTAGTCCTTCGATCCGGAGTGGCTGGATTCGCCACCATA
CCACGACTGCCTGGTCCTGCTCGATCTGCTCTCTCCGCGGCTCCGGGCGA
ATCTCTCTTTGCATCTTCGGCTTCTATCATTACCACTGCTGTCAAGAGCG
GCACCACCACCACAACCATGTCGTTTCCTACTGGGAACAAACCCGTAAAA
GAGATCGACAACCCACGGCCGAAGCTCTGGATCTACGATCACTGCCCTTA
CTGCATTCGGCCACGGTGAGAGCGACACACTCGCTCAGCAGGCAGAACTA
AAAGACTCCGTGCAAATTTACAGCCAGCAAGCAGTACGCTAGGCATGAGG
AAGAGAGTCAGTTTCGAGACTTGGCAGCGTTCAATCACAATCCCTTCTCG
GAGTTTACACAACGAGGTTGTCGAGGTAAGCCTTGTGGCGGGCGACTGTG
GTTGGACCTTCTGCGGGGCTTGCTTTCAAGACGGGTGCTCGAATGCCTCC
CTTTGTGGTGCAGACTGCATTGGTTGTCGTGGAAATCCAAAAACGCACAT
GTACCTTTTTCCAAACTTACAAAAACTCAGATTATATGTTACAAGTATAG
GACCTGTGAGTATAGAAAGAGGAGAGATGGAGAGTATAAGGTAGGTTCGC
ACACGCATCTATGTAACTGCGCCACAACCGATATAGGATGATATTACATC
ATGGGTTGATACCTGTACAGCAGTAGCATATATTTGTGGAATAGGAAAGT
AAAATCTGCACGTTGTTATAGCCAATATCTGCTCCAGATCCTCTTCTGGA
GAGAAGGCGAACACATTGATGATTTTGTAAGTTAAAAAAAAAAAACATCA
ATGTGTTCGCCTCTCTCCAGACAAGATCACATGTACTTCGTAGATATTAC
TGACAGACGTTTGGATCTTTCCAGTTTCCCTGCCGGCTACTAGTGGTCCC
CTCGTTTACCACTAGATGCAGAGGAACGGGGGTTCGATTCCCGGTGAATG
TGTTCCTTTCCTACTTTGAAAGCGGCTATGCTGTTAGTAAAAGCAGATTC
GGCTTCGCCGACGAGGGTAGGGACCGCGGATCCCTGCTCGCGAGAAAAAA
TCTCACGCATGTACCGCAGAAGGAAGGTGGGGGTGACTCCTCCTGTGTTG
ACCTTCCTCCTGTGTGACCCCGTCGATGGGCCTAGCCTGTAGTTTGAACC
GCAGGGTGCAGACTAGTGTGCCAGAGAATATGGGATGACAACACACTGCT
GTACAATACTTCTTCCTCGTTTTTTTTTTTCCCGGTTCATTTAATAGTTC
AAGTTCCACAAATTCTCTACAACACACAACACACGGTAATTTGTACCGCA
ATCGAACTCAAGCTTATACGACAGCAAACAACAGTGGTTGTATCTCGATT
GGGCACAAGAAGGAGTGGTTAAGAGTTCAGCGTGTGAATTATACCATCCC
TTTGCTGTTCATTCGTTCATTCATTCATTCATTCGTTTCATATCGCCGTA
CACACGTCCCTCCGCTACTGCTCTACTTCGAAGTACTCGGAGTATTAATT
AATTAATTCATTTAATATCATATCATATGTATTTGGTACCGCAGTACCTG
TACGCTTCAGTGCTTCGGGTAGGACGAAAAATGCGGCTCGTCTCTTCCCT
GTAAACTGCTGTACTTGATTCTACCACCGCACGGCACTTACTCTGTACAG
CAGTATCGTGACACAAACCGTCCTGTGCCGGGTACCATGCATGCGTAGGT
TTTTCTCGTGGCGACTAACTGTACCTGCCATTCCCTCCTCTACTCTCATG
TGCCGATTTTCTGGGCTTTCGTCAGCGTTTATTTCTTTGCAAAGCAATCG
ACTGCTGCTGTCGTCCGCCCTGCTACTGCCACCCTGTGTACGTACTGCAT
ACAAGTTTTTTCTTTTTGCTCTCGGCCTTGGAACAAGTTGTTTACGTATG
ATAATAATTTACCTTGACCTGAATGTATCGTAGCCAAACAGACGTTCGTA
GCTGCCGCACCACGCCGCTTGATAAACGCCTGCATGCGCTGGTACTCAAT
TTTGCACGATGAATGCTTTTACCTCGCGCATATTTACAGCACAAGAACTC
CCGAATTAGCGCCACAGCCGTAGCTCCCCCCCCCTTACCCCCCCGCCCAT
CCTCATCGCTGCGCCCGTCGAGGCGGTGTTTGTGCAACCTTGGCGTAATC
AATGCGTGTCTCGTCGGTGTAAACCCGGCTTGCTTCATTTCAGCGGTCTT
GAAATGCGAGAAGGACAACGGAAGACCATGGTTACGAGTGAACAAGTTGC
CCTCCCCACCCCCCGTTCCCCCGATCGCACACTCCAAAACGCCTCTGCCG
TAAACCCACTGCTACAGGATGGTGCTCGGGCTGAAGGGAATCACGCACGA
TCTGGCGTACTTGTCCAATGACGACATCGAAACGCCGACCGCCATGGCTG
GGAAAAAGGTGGTGCCGATTCTGGAGCTCGGCCGCCCTGGGTCAGAGGAC
CACGAGGTGCGTCAAAGTCAGTCAGCAGGCCGTCGTGTCGAGCTGTCCGT
TCTGAATGACTTTTGTCATGTGGCTACCACGTCGCGTGTGTAGAGGGTTT
CACCGTAACCTCACCTAGTATGACGGAGCTAGCTCTGCCCTCCGGGCCTT
TCTTGAAGCCCGCGATCTTCACAGCGGGAAAAAAAAGAGAGTTTTATGAT
TAGTACAGCGCCGAAAAGAGGTGACGTGACTGGTTTTGGAAATATCGGTC
TCGTCGAGAGCTGCCCGAAAACGTGTCGTTTGGTGTTAGCAATCTCTTCG
GTACGAAGCAATCGAACGTTTCAGTAGTCGGTTGGGGGGGGGGGGGGCAT
TTGTAGCACTCAGACTGCAGGGCACCCGAAACTGCAGGGTACCGACACAA
CAGGCACTGGAATGCTGTGCGATCACGAATCAGAGGTTGGGGAGTCATCG
GGAGAAGCCATGCGCGCGTGCAAGCTCAGTCCGGCACTGATCGTACTTTG
CTTTTCTGCTATTTTTTTTGTCCTTGGCCTTTGTGTTTTTTTGTGCACGT
TCGTGCGATACTGCGTGGTCTCGTGGCCGCCGAGATCCTTGACGCCTCTC
ATTTTAACATTTTTGCGGCTTGACCACACCACGGTTCTACGCTCTCTTTT
TGCCTAGGAGCCATTGCTGTTGCCACACTGCAACCTGTACGGTCACAACG
ATTACTGCTGCAACAAAAGTTCACTGCTGGTCATATTACTGCTGGTTGAA
CGTTTTGACTGTTGTATCCAAACCCTTCTGCTGTAACGCGTCCGCTTTTG
TTGTTCACACACCGCCACTGCTTGTAACGCACCACTGCTTGTAACGCATT
CACTGTCACTGCTGTTTCCGCTGCTGCACCTACTGCTACACATTCCCGCC
TTTACCGTTGGCCGAAACTGCAGCGATGACGTGATGCCACCAGAAATAGA
TCTAGGTAGACTAAAATTTTGCGCTCGCTGCTTACTGGTACGGAGACCCT
CGTCCACGCAAAGGTGAAAATAATGAGGCACGCAAGGAAAACATATGTCA
TACGAAGAGTTGACGTGTTATTTTTATACTTCAGTATATTTGATGTAAAC
AGGTATTTTAATACTCCCATTGTCTGTACTGCCTTGCCGTACGTATGTGT
AGATCATGATCGAGAGCCTCGATATCGTCAAGAGGCTAGACGAGGACCCG
CAATTCGGGCCGCCGGCTCTCGCTCCTGCCGCTGACCGAAAGGACATCGA
CGGGTGGATATCCTCCGCCGCCATGTTGATGCGCCGCCTTGTTCGCCCGA
GGAACGCCGTAACGCCTCTCCCGGAGTTCCAGGTGATAATTTTACAATTT
TGATGGACGTACGTGACACATACATGATGTGGATTTTTTTTTGTTTTCTA
CGATTGCTCGTGGTCTCGCGGGCAAAATAATCATTCCGAAATTGCTTGTA
AATTTGGGAGAGAACAACAGCTGCATAAGTGCCTATTGTTCTTGCTGTTG
CTGAACGAAATCACAATAACACGCAATTGCTTGGTTATATTGCATCGCGA
GGATAGTACAGAGAGCAGTGCATGTTGTTGCCGTTGTTGCTGTGTCGTTG
TTGTTGTCGTGGCATCACGAACCGCTTCGACCCCCATCGAGTACCTCCAC
GTCCCGTTGCTCCAATCGATGACATGACGGCATCCGTAGGCACAGGCTAT
CATACATGGCTAGGGCTGTGATACCACATGATATAGTACGTATGCACAGA
TAGTAGGCAGGCGCAATCGGGTAATGACTATGTTCCCCCCCGCCTCACCC
CCTCCGCGCAATCCTATGACACACTACAATCTCAAGACCCGATCAGCAAG
GGAGGCGTTCGTCCGCAACCACCCCTTGCCAGAGCCCAGCAGCTACGAGG
CAAACCTGAAGGACTCTCCAAAATTGGTGAGCTCTGCTTGGTTGAAGTAG
CACGTAGATGTAGTTGGATGGGATGGGATGGAAAGAGGATATGGGACTGG
ATAGGTGTTGCCGAAAAGGTCACTCGAACGCATAAGTACTGCTGCACCAT
GGTGGCAACACTAATTGCACACACGATTTATCCGTTCTTGTGAAGTACGA
AAATTTCCAACAGCCTCTTGAAGAGGTGGCCTAGGCGGATAGACAGAGGG
AAAACCGCTCCCCAAATCCCCAAATCCCCCCACGTCAAACATAAAACTTG
CCCTGCCTTCCCGTTGCTCTGCTGCTGCTGCTGTCCTTGTGTGCCGATGT
ATGTGGACACAGATTGAGGAGTTGGAGCGCGAACTGTGGAAGCTGGAGGG
AATGATCCACAGCTCCACGAGCGTGGCAGCGGACGGCAAGCTGTCGTACA
ACGACATCGAGTTTTTCCCGCGCATGCGCGGCCTGACAATCGTTCAGGGG
CTCGGCATCCCTCCGAAGCTGAGAGCGTACCTCGACGCCGTCTCGGAGCG
GGTCGACATTCCGCTGTGAGTCAGCCAACTTCTTTTTTCGTTGGTGACTT
TCCCGCTCACTTTTGTGTCATCTCACGTGCGAGCAGCACCGTTTTGTGTT
TCTAGTCCCGCGCACTTCATCGCGATACCGTCGTCTCGGACCCCAACCTC
AACGTTCCGCTGCCGATCATTTTTTTCGTCATCCTTTTTTTCTACGTGTA
TCATAAAACTGTGTAGCCTCAGTGTGCCCCTCCTGCTGCCGCGTCCTGAT
TACTGCGTCTGTTTATTTGCCCCAGCAATCCAATCGGGTTCTGCCTTCAC
CGTGTTCGGTGGGAGTTGCAACCCCTCGATTCCTGATCTCAGCACTCGGG
GTCTGATAGGTTTTGATTTTGATTTTGATTTTGTTGCGGGCTATCTTTTT
CTCTAATTCTCTATTTTCTCTCTTTCTTTGTTGTATTTGTGGAATATTTC
GAGGTCTATTTGAACCTGCCGGATTTTCGAATTTTCTTCCTTGGTGTACC
TTCATTGCGTGCGTGTGTGTGTGTGTGTTTTTTTTCCATTATTTATTCCA
GGCAACAGCAGTCTACACCTTTCGGTATGAAGCGGGCGCAACAGCCAGGG
TCACATATAAGGAAGGTTTAGCGTCAATCAGGAGTCTTATCTTGCTCCTC
CGCCCACCTTCTGTGGTGCTTGTCTCGCTGCCTTGGGTAGCAAGGATTTT
CCCGCGTATCATACACACAAGTGCCATTTTTTGGGTGTGTAACCTGTGAC
CACGGAAAGCGCCCGCTGTCGGACAAGTCAGCTGTACGGACATTAAAAGG
TACTAAGCAGAGATCGGAACGGTTTTCAGTGTGAAGACAACACACACAAC
TCATCGAATCCTGATCTCCGCCGCTTTTTGTTCACCCGTGAGAGAGAGGA
GGGGATAGGAGCTTGTAGCGTTGGAGGACGAACACGAACGGACGCGGTGG
GGGGCTCTCTCTGTGTCAGCCGTGCATAGTACCGCACACACGTGACACAC
GCACAGCAGCAGCTAGAGAAAAAGTGCACGGCCAGACGAGCGTTTTGATT
TTTACAAGATTATACAGATTTTACAAGTTGTTTGACCAAGTGTTTTACAC
CTCGTATCCTTTTTCATTGTTCGGTTCGATTTGATCGAGAAAGGAATCAC
CTTCTAAAAATGAGCTTTGTGTGTTTTATGTGTGTATTTAAGTACAGAGG
TCTGCTGCTGTAAGGAATTGTGGGGGGGGGGGGCGCTCAGTTAGTCCCTC
GGACACTCGCGTGTCAGACAGCAGCAGACACGGTTGTGTTTCGCTCTTGA
GAAAAAAAAACAGACTTGAGAATTTCAAGAATTTCATAATTTCGGGAATT
AAATTAAGCCCCCACCCCGTCCCTTTCCCCATGAACGTGTGTTTGCCTGG
CCTCCTTGTCCAGGCACGACAAGATATCTTCGTGACGTGATACAAGAACG
CGAGCGTCGGCACAACGCTGTCAAGTACATGGTAGGTTGAGAGCACAGGA
GAGGAGAGGAGAGCTCGGGGGGCGTGCAGTCGGTGGGCGGCCATGGCAGA
CGGCGCATGGCAAAAGGCAGCGGCTGTTTTCGTTCCCGTAGCGAGGCCAA
TGGAAGCGAGGGAAAGGGGCGGGGGGGGGTCGGTGGCAATGTTTCCCGAT
AGGATTAAGCAAGTGTGTCCTCGAGGCAATAGCACTGCTGGGCCAGTCGA
GACGACACCCTTGGTGTGTGGCCTGCCGAAAACGCGTAAATTCTCGGACA
ATCGCACGATCGGGAGAAATACCATGGGACATGGAAAAATGATGATGGGA
AAGAAAAGAGTGGTACCAATGTAGGGCTTGACCTTGCCGTGTGCGGCTTG
GCCGTCAACACAGCAGGACTCGCACAGAGGAAGGGGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig85:259482..266518-

>mRNA_P-littoralis_Contig85.55.1 ID=mRNA_P-littoralis_Contig85.55.1|Name=mRNA_P-littoralis_Contig85.55.1|organism=Pylaiella littoralis U1_48|type=CDS|length=999bp|location=Sequence derived from alignment at P-littoralis_Contig85:259482..266518- (Pylaiella littoralis U1_48)
ATGCGCATAGACACCCCTCGAAAACACCAGACAGCGAAGGTGATGCCATT
GCTTCTGCTGCCCACCCGGCCACGCATCTCGATCTTCCTGTCTGCGGGCG
TTATTGCACAGCTAGTCCTTCGATCCGGAGTGGCTGGATTCGCCACCATA
CCACGACTGCCTGGTCCTGCTCGATCTGCTCTCTCCGCGGCTCCGGGCGA
ATCTCTCTTTGCATCTTCGGCTTCTATCATTACCACTGCTGTCAAGAGCG
GCACCACCACCACAACCATGTCGTTTCCTACTGGGAACAAACCCGTAAAA
GAGATCGACAACCCACGGCCGAAGCTCTGGATCTACGATCACTGCCCTTA
CTGCATTCGGCCACGGATGGTGCTCGGGCTGAAGGGAATCACGCACGATC
TGGCGTACTTGTCCAATGACGACATCGAAACGCCGACCGCCATGGCTGGG
AAAAAGGTGGTGCCGATTCTGGAGCTCGGCCGCCCTGGGTCAGAGGACCA
CGAGATCATGATCGAGAGCCTCGATATCGTCAAGAGGCTAGACGAGGACC
CGCAATTCGGGCCGCCGGCTCTCGCTCCTGCCGCTGACCGAAAGGACATC
GACGGGTGGATATCCTCCGCCGCCATGTTGATGCGCCGCCTTGTTCGCCC
GAGGAACGCCGTAACGCCTCTCCCGGAGTTCCAGACCCGATCAGCAAGGG
AGGCGTTCGTCCGCAACCACCCCTTGCCAGAGCCCAGCAGCTACGAGGCA
AACCTGAAGGACTCTCCAAAATTGATTGAGGAGTTGGAGCGCGAACTGTG
GAAGCTGGAGGGAATGATCCACAGCTCCACGAGCGTGGCAGCGGACGGCA
AGCTGTCGTACAACGACATCGAGTTTTTCCCGCGCATGCGCGGCCTGACA
ATCGTTCAGGGGCTCGGCATCCCTCCGAAGCTGAGAGCGTACCTCGACGC
CGTCTCGGAGCGGGTCGACATTCCGCTGCACGACAAGATATCTTCGTGA
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