mRNA_P-littoralis_Contig847.23.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig847.23.1
Unique NamemRNA_P-littoralis_Contig847.23.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig847.23.1 vs. uniprot
Match: A0A6H5L982_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L982_9PHAE)

HSP 1 Score: 524 bits (1349), Expect = 1.790e-181
Identity = 262/336 (77.98%), Postives = 286/336 (85.12%), Query Frame = 3
Query:  231 LEEVKRLLADRKPWPAFLHAGLASDCPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTILDIGALIRRGLPPKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVDHVISHLVGVRKQSNLRCLIELDDVWDPQMVPLFLRTGFHCLV 1238
            LEEV+R L  RK WPAFLH   A+ CPE+VGEALAWMASG VGLLNVASVGPL+P+CEAFKGLIQAAEGAAEADE LRELI+WCAFLT+VLLQHGKE+D LAPV  PL  FVSTTN+LAKRAK LA R KC ALLCF RD KQIQ+FDAKLR IW DIQG TIL + A  R   PPKTGEMAK+P NA  LPPAFVERS LVEAV  +L A +RAT+ A VL GIPGGGKTV AS+VVRCE+VRRSF+DGIFWVQVGQVGTGNP ALLKGLAEDLAHAPSNRP TVPHEFRDV+HV+SHLVGV +Q NLRCL+ LD+VWD +MVPLFLRTGF CLV
Sbjct:    9 LEEVQRHLEGRKKWPAFLHGEWANGCPEDVGEALAWMASGVVGLLNVASVGPLMPICEAFKGLIQAAEGAAEADENLRELIAWCAFLTDVLLQHGKEVDALAPVMKPLRDFVSTTNQLAKRAKRLATRRKCAALLCFARDGKQIQDFDAKLRSIWNDIQGVTILWVSAEFRAARPPKTGEMAKIPHNAPALPPAFVERSGLVEAVAQDLAAAERATDTADVLRGIPGGGKTVAASSVVRCENVRRSFKDGIFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPRTVPHEFRDVEHVVSHLVGVLEQGNLRCLVVLDNVWDREMVPLFLRTGFRCLV 344          
BLAST of mRNA_P-littoralis_Contig847.23.1 vs. uniprot
Match: D8LL58_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI)

HSP 1 Score: 487 bits (1254), Expect = 3.430e-159
Identity = 248/385 (64.42%), Postives = 292/385 (75.84%), Query Frame = 3
Query:  159 MEAGAPYSGDSVQAGGAAEPTT--------------------ETLEEVKRLLADRKPWPAFLHAGLAS-----DCPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTILDIGALIRRGLPPKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVDHVISHLVGVRKQSNLRCLIELDDVWDPQMVPLFLRTGFHCLV 1238
            M A AP SG SVQAGG AEP T                    + L+EV+RLLA RKPWPAF+ AGL +     +CPE VGEAL WMAS  VGLL++ASVGPL PVC+AF  LI+AAEGA E  + L EL+SWC+FL  V ++HGK+ D+L P+  P+  FV+TT +LAKRAK + ARGKCTALLC  RD KQ+Q+FD KLR IW+DIQG T+L   +  R  LPPKT  MA+VP+NA+ LPPAFVER DL +AVV +LVATDRAT  AHVL G+PGGGKT+ A AVVRCEDVRRSF+DGIFWVQVGQVGTGNP+ALL+GLA DLAHAPS++PHTVPHEF DV+H +SHL GVRK+ NLRCL+ LDDVWD Q+VPLFL  GFH LV
Sbjct:    1 MAARAPSSGGSVQAGGTAEPVTAEYSFGGLHCSWTTLGIGSGQMLQEVERLLASRKPWPAFVQAGLQARYEWNNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTSLIEAAEGAIEVAKNLEELVSWCSFLVGVFIEHGKQEDNLRPIAKPMKDFVATTIELAKRAKAMGARGKCTALLCHRRDGKQVQDFDVKLRHIWDDIQGVTLLAFYSDFRATLPPKTAYMARVPKNAKQLPPAFVERRDLFKAVVKDLVATDRATNAAHVLRGMPGGGKTIAAKAVVRCEDVRRSFKDGIFWVQVGQVGTGNPMALLQGLARDLAHAPSHQPHTVPHEFVDVEHAVSHLEGVRKERNLRCLVVLDDVWDAQIVPLFLCGGFHSLV 385          
BLAST of mRNA_P-littoralis_Contig847.23.1 vs. uniprot
Match: A0A6H5KK53_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK53_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 1.320e-98
Identity = 180/370 (48.65%), Postives = 233/370 (62.97%), Query Frame = 3
Query:  159 MEAGAPYSGDSVQAGGAAEPTT-ETLEEVKRLLADRKPWPAFLHAGLA-----SDCPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTILDIGALI----RRGLPPKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVDHVISHLVGVRKQSNLRCLIELDDVWDPQMVPLFLRTGFHCLV 1238
            M A AP SG SVQAG AA PTT E LEEV+ LLA +KPWPAFL AG+       +CPE   +AL WMAS AVGLL+VASVGPL PVC+AF  LI+AA+GA E  E LREL++WCAFL  VL++HGK++D+L  V  PL  FV+TT +LAKRA  +A R KC A LC  +D K +  FD KLR+ W DIQG  +LDI  ++     R  P    +MA VP  A  LPP+ V+R  L   ++  L ATD A+   +VL G+ G GK++ AS+VVR E+VR+ F+ G FW++VG  G     AL +GLA  LA   +     +P  F  ++ +I HL  +  +  L  L+ LDDVW+  +V +   TG   LV
Sbjct:    1 MAARAPSSGSSVQAGAAAAPTTPERLEEVETLLAYKKPWPAFLCAGVDVHGEWDNCPEGARDALEWMASTAVGLLDVASVGPLTPVCQAFTALIEAAQGAMEVVENLRELVTWCAFLVGVLIEHGKQVDNLKAVNKPLNEFVATTGELAKRANVVAGRSKCMAFLCHKKDAKMMASFDDKLRRFWTDIQGLAVLDIQEIVTRMEERSRPLPLPDMADVPAAALKLPPSHVKRVGLEAEILKSLTATD-ASGAPYVLLGMGGAGKSLLASSVVRTEEVRKHFRAGAFWLRVGPGGEDQLQALFEGLAR-LAIPEAK----LPQRFNSLEEIIQHLTVLVAEDKLPRLVVLDDVWERAVVDILRPTGLRLLV 364          
BLAST of mRNA_P-littoralis_Contig847.23.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 8.040e-78
Identity = 169/369 (45.80%), Postives = 219/369 (59.35%), Query Frame = 3
Query:  171 APYSGDSVQAGGAA--EPTT-ETLEEVKRLLADRKPWPAFLHAGLASD-----CPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTILD----IGALIRRGLPPKTGEMAKVPQNARVLPPA-FVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVDHVISHLVGVRKQSNLRCLIELDDVWDPQMVPLFLRTGFHCLV 1238
            AP SG       AA  EPTT E L+ V +LLA++KPWPAFLH G  +      CP  V EALAWM + AVG+L VASVGPLVPVCEAFK LI+AAEGAAE  +KL+ L+S CAFL  VL+QHG+ +  LA V+ P+  FV TTN+LA  A   A  GKC A  C   D   +  F+  LR+I  DI     L+      A +   LPP   +MA VP  A  LP + +VER+ + E  V + + T   +   + + G+ GGGK+V ASA VR   VR  F+ GIFWV+VG+    + LALL+GLA D+  AP++ PH VPH    ++ V  HL  V        L+ LDDVW+ ++V  F+  GF  L+
Sbjct:   47 APASGGQAGLAAAAVVEPTTVERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGKCRAFCCHRPDLSALAGFEECLRRIGSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQE--VADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLL 413          
BLAST of mRNA_P-littoralis_Contig847.23.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 1.260e-77
Identity = 171/369 (46.34%), Postives = 221/369 (59.89%), Query Frame = 3
Query:  171 APYSGDSVQAGGAA--EPTT-ETLEEVKRLLADRKPWPAFLHAGLASD-----CPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTILD----IGALIRRGLPPKTGEMAKVPQNARVLPPA-FVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVDHVISHLVGVRKQSNLRCLIELDDVWDPQMVPLFLRTGFHCLV 1238
            AP SGD      AA  EPTT E L+ V +LLA++KPWPAFLH G  +      CP  V EALAWM + AVG+L VASVGPLVPVCEAFK LI+AAEGAAE  +KL+ L+S CAFL  VL+QHG+ +  LA V+ P+  FV+TTN+LA  A   A  GKC A  C   D   +  F+  LR+I  DI     L+      A +   LPP   +MA VP  A  LP + +VER+  V+ V   L A + +     V+ G+ GGGK+V ASAVVR   VR  F+ GIFWV+VG+    + LALL+GLA D+  AP++ P  VP     ++ V  HL  V      + L+ LDDVW+ ++V  F+  GF  L+
Sbjct:   30 APASGDQAGLAAAAVVEPTTVERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERA-AVQEVADGLTAPEESRAPYTVV-GMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLL 396          
BLAST of mRNA_P-littoralis_Contig847.23.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 1.260e-74
Identity = 153/346 (44.22%), Postives = 205/346 (59.25%), Query Frame = 3
Query:  231 LEEVKRLLADRKPWPAFLHAGLASD-----CPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTILD----IGALIRRGLPPKTGEMAKVPQNARVLP-PAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVDHVISHLVGVRKQSNLRCLIELDDVWDPQMVPLFLRTGFHCLV 1238
            LE V +LLA+++PWPAFLH    +      CP    EAL W+A+  VG+L+VASVGPLVPVCEAFK LI+AAEGAAE+  KL+ L+S CAFL  VL+QHG+ +  LA V  P+  FV TTN LA  A   A  GKC A  C   D   + +F+  LR+I  DI     L+      A +   LPP   +MA VP  A  LP  ++VER+ + E  V + + +       + + G+ GGGK+V ASAVVR   VR  F+ GIFWV+VG+    + LALL+GLA ++  A ++ PHTVPH    ++ V  HL  V        L+ LDDVW+ ++V  F+  GF  L+
Sbjct:   16 LERVGKLLAEKRPWPAFLHIEARATEEWEACPTVAQEALTWIATATVGVLDVASVGPLVPVCEAFKALIEAAEGAAESQHKLQSLVSQCAFLATVLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWANGGKCRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQE--VADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLL 359          
BLAST of mRNA_P-littoralis_Contig847.23.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 1.370e-71
Identity = 150/356 (42.13%), Postives = 198/356 (55.62%), Query Frame = 3
Query:  198 AGGAAEPTTETLEEVKRLLADRKPWPAFLHAGLAS-----DCPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTILDIGALI----RRGLPPKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVDHVISHLVGVRKQSNLRCLIELDDVWDPQMVPLFLRTGFHCLV 1238
            A   A+ T + LEEV+ LLA++KPWPAFL A + +     DCPE   +AL WMAS AVGLL++ASVGPL+PVC+AF  LI+AA+GA E  E LREL++WCAFL  V ++HGK++D+L  +  PL   VSTT +LAKRAK +A RGKCTAL C  +D K I  FDAKLR++W DI+G  ILDI  ++     R  P     MA VP  A  LPP+ V+R  L   +V+ L ATD +                                  GI W++VG+VG     AL + L      A       +P  F   + +I +L  +  +  L  L+ LDDVW+  +V     TG   LV
Sbjct:   51 AARGAQRTRKRLEEVETLLANKKPWPAFLRAAVETRGEWDDCPEGATDALEWMASTAVGLLDIASVGPLIPVCKAFTALIEAAQGATEVVENLRELVTWCAFLVGVFIEHGKQVDNLQKIAKPLNELVSTTGELAKRAKVVAGRGKCTALFCHKKDAKTIASFDAKLRRLWTDIRGLAILDIQQIVIRLEERSRPVPVPGMADVPAAALKLPPSHVKRVGLEAEIVNSLTATDAS----------------------------------GISWLRVGRVGEDQLQALFEALTRGAFPAAK-----LPPRFNSPEEIIQYLTVLVAEDKLPRLVVLDDVWERAVVDTLRPTGLRLLV 367          
BLAST of mRNA_P-littoralis_Contig847.23.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 1.590e-70
Identity = 157/355 (44.23%), Postives = 207/355 (58.31%), Query Frame = 3
Query:  207 AAEPTT-ETLEEVKRLLADRKPWPAFLHAGLASD-----CPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTILDIGALIRRGLP----PKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVDHVISHLVGVRKQSNLRC-LIELDDVWDPQMVPLFLRTGFHCLV 1238
            A EPTT E LE V +LLA+++PWPAFLH G  +      CP    EAL WM + AVG+L+VASVGPLVPVC+A K LI+AAEGAAE ++K++ L+S CAFL  VL+QHG+ +  LA V  P+  FV TTN+LA  A   A  GKC A  C   D   +  F+  LR I  DI     L+   L    LP    P+  +MA VP  A  LP  +VER+  V+ V   L A +       V+ G+ GGGK+V ASAVVR   VR  F+ GI WV+VG+    + L LL+GLA ++  AP++ PH VP     ++ V  HL  V   +     L+ LDDVW+ ++V   +  GF  L+
Sbjct:   19 AVEPTTVERLEHVGKLLAEKRPWPAFLHIGARATEEWEACPTLAQEALTWMTTAAVGVLDVASVGPLVPVCQALKALIEAAEGAAECEDKVQSLVSQCAFLATVLIQHGRAVGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRSDIALVDGLEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERA-AVQEVADGLTAPEEPRAPYTVV-GLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLL 371          
BLAST of mRNA_P-littoralis_Contig847.23.1 vs. uniprot
Match: A0A6H5J6Q8_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q8_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 1.230e-69
Identity = 154/366 (42.08%), Postives = 203/366 (55.46%), Query Frame = 3
Query:  159 MEAGAPYSGDSVQAGGAAEPTT-ETLEEVKRLLADRKPWPAFLHAGLA-----SDCPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTILDIGALIRRGLPPKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVDHVISHLVGVRKQSNLRCLIELDDVWDPQMVPLFLRTGFHCLV 1238
            M A AP    SVQAG AA PTT E LEEV+ LLA +KPWPAFL AG+       +CPE   +AL WMAS AVGLL++ASVGPL PVC+AF  LI+AA+GA E  + LREL++WCAFL  VL++HGK++++L  V  PL  FV+TT +LAKRA  +A RGK                                      +  R  P    +MA VP  A  LPP+ V+R  L   ++  L  TD A+   +VL G+ G GK++ AS+VVR E+VR+ F+ G FW++VG  G     AL   LA  +  A       +P +F  ++ +I HL  V  +  L  L+ LDDV +  +V     TG   LV
Sbjct:    1 MAARAPSDVSSVQAGAAAAPTTPERLEEVETLLAYKKPWPAFLCAGVDVHGEWDNCPEGARDALEWMASTAVGLLDIASVGPLTPVCKAFTALIEAAQGAMEVVKNLRELVTWCAFLVGVLIEHGKQVENLKAVNKPLNEFVATTGELAKRANVVAGRGK--------------------------------------MEERSRPLPLPDMADVPAAALKLPPSHVKRVGLEAEILKSLTTTD-ASGAPYVLLGVGGAGKSLLASSVVRTEEVRKHFRAGAFWLRVGPGGEDQLFALCDILARKVTPATK-----LPQQFNSLEDIIQHLTVVVAEDRLPRLMVLDDVLERAVVDTLRPTGLRLLV 322          
BLAST of mRNA_P-littoralis_Contig847.23.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 1.200e-63
Identity = 157/368 (42.66%), Postives = 199/368 (54.08%), Query Frame = 3
Query:  171 APYSGDSVQAGGAAEPTT-ETLEEVKRLLADRKPWPAFLHAGLASD-----CPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDI------QGHTILDIGALIRRGLPPKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVDHVISHLVGVRKQSNLRCLIELDDVWDPQMVPLFLRTGFHCLV 1238
            AP SG       A EPT  E L+ V +LLA++KPWPAFLH G  +      CP  V EAL WMA   VG+L++ASVGPL PVC+AFKGLI+AAEGAAE+ +KL+ LIS CAFLT VL+QH + +  LA V+ P+  FV+TTN LA  A T A  GKC AL C   DR  + +F+  LR I  DI      + H +L   A+ R+  PP    MA VP     L    + R  L+   +  L  T    +   VL G+ G GK+V ASAVVR E VR  F  G+FWV+          A L+G A  +A        T       V+ V  +L  V   S    L+ LDDVW+ ++V     TG   LV
Sbjct:    4 APTSGGQAGLVAAVEPTAAERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALVWMARATVGVLDIASVGPLEPVCQAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMKDFVATTNDLAAFAATWAKGGKCRALFCHRSDRSTLTDFEEGLRTISNDIALVDGLEHHQLLL--AVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNT-AVGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRARDA-KDQLHACLEGFALRVASTSG----TTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLV 363          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig847.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5L982_9PHAE1.790e-18177.98NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LL58_ECTSI3.430e-15964.42NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KK53_9PHAE1.320e-9848.65NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI8.040e-7845.80NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G720_ECTSI1.260e-7746.34NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KXS7_9PHAE1.260e-7444.22NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JJK0_9PHAE1.370e-7142.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGG5_ECTSI1.590e-7044.23NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5J6Q8_9PHAE1.230e-6942.08NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G6W2_ECTSI1.200e-6342.66NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig847contigP-littoralis_Contig847:96588..100085 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LL58
PFAMsNB-ARC,TPR_10,TPR_12,TPR_16,TPR_4,TPR_7,TPR_8
Model size1238
Max annot lvl2759|Eukaryota
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.1e-160
EggNOG OGsCOG0457@1|root,KOG4658@1|root,KOG1840@2759|Eukaryota,KOG4658@2759|Eukaryota
DescriptionADP binding
Cds size1080
COG categoryS
BRITEko00000,ko00001,ko03019,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791712.2949028-CDS-P-littoralis_Contig847:96587..975981680791712.2949028-CDS-P-littoralis_Contig847:96587..97598Pylaiella littoralis U1_48CDSP-littoralis_Contig847 96588..97598 -
1680791712.30995-CDS-P-littoralis_Contig847:97715..977841680791712.30995-CDS-P-littoralis_Contig847:97715..97784Pylaiella littoralis U1_48CDSP-littoralis_Contig847 97716..97784 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791712.3222256-UTR-P-littoralis_Contig847:97784..978681680791712.3222256-UTR-P-littoralis_Contig847:97784..97868Pylaiella littoralis U1_48UTRP-littoralis_Contig847 97785..97868 -
1680791712.3340447-UTR-P-littoralis_Contig847:100011..1000851680791712.3340447-UTR-P-littoralis_Contig847:100011..100085Pylaiella littoralis U1_48UTRP-littoralis_Contig847 100012..100085 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig847.23.1prot_P-littoralis_Contig847.23.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig847 96588..97784 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig847.23.1

>prot_P-littoralis_Contig847.23.1 ID=prot_P-littoralis_Contig847.23.1|Name=mRNA_P-littoralis_Contig847.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=360bp
MEAGAPYSGDSVQAGGAAEPTTETLEEVKRLLADRKPWPAFLHAGLASDC
PENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEK
LRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLA
ARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTILDIGALIRRGLPP
KTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIP
GGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLA
HAPSNRPHTVPHEFRDVDHVISHLVGVRKQSNLRCLIELDDVWDPQMVPL
FLRTGFHCLV
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mRNA from alignment at P-littoralis_Contig847:96588..100085-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig847.23.1 ID=mRNA_P-littoralis_Contig847.23.1|Name=mRNA_P-littoralis_Contig847.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3498bp|location=Sequence derived from alignment at P-littoralis_Contig847:96588..100085- (Pylaiella littoralis U1_48)
GCAACGTACTCATTAACTACAGGGTCCAGCTCCACTGCGATTCGACCGTG CGTGAAAAGTGAGCGTGCTATCAGGTGAGAGATGACAGAGTGCGGGGAGA TCCCCCCGCAGCGTTTGCGTCAGCCTTCCAGTATAAGTCTAGACTTTCTT TGTTGCGCACGTGCCGCGCAGCCCCAGAGACACTTAGAACTGCTGTCACG AATCTACGAGACGCATCTTGCCTCTTTGAAGTTTAGTAGGCTCTTATCCA TTCTGCTAGCATTGCTTTCGGCATAGTTGGGCATAAACAGCATAGGTAAA AGCATAACTCGAAAAGAGCAATGCTCAGGCTCAAAAGCATAAGTGCAGCA TTTTTAGGCATAATAGGCATTAGGTGTGCTTCAAGCAGTGCTAGCGTGCT ACACAAGAACCTGAAACGGCAACGAGAACACGAAGTGCCCCGCCGCTGTT TGTTGTTTGTACGCGATTTTTCCTCACAACTAAAACTTCCAGTTCTTACC TGAATTCAACTTAAACCGCACACAGACGCTTCTACAGGAAGTGCGCGAAA ATACAAAATACAAAAAAAAACAGGCGCCACGAATACAAGAATACACCAGC GTACCAGCAGCAGCAGCACGCAACAACACAACAAAACAACACACAGCAGC GCAGCAGCGACACCGTGACCAACAGCCAGCCGGAGCAGCTGGACATATGT ACACACCACCACAGCATCAAGCAGTACGTAGGATGTCGGATATTGATATC GATGGGTTTTGTGATGGCTCTGACATGGAGATCAGGTGCGTCGATGGAAG TACCCCTAGTGATGATGACTACACTGTGAAGCACTAGAGGTTCAGCGGGA CGGCGGAAGTTAGAAATAATATAATACTAAGTACTTCTCCAAAGGACATT TCCTTTAATTTTTTTATTCGTAGTTGATCGCACGCAACCCCCCAACAAAT GCCCAGTAGCATATGATGTGTGTGTCTAGGCGTGCTCACACAACAGGCAA AATATACCAAGTACGAAGCACGCGGCATTCACACACATCATACTGTGAAC GCGGTAAAAAATGAAAAATGCGTGTGTCACCAGCGAATGCCACTGCAGTC TGCAGAGTAGATGCTTGGGCAACGACCATAAAGTTTGTACTAGGTCCTGT ACACCTGTGTACAACTATACTTGCCTGCTGAAGCATTTGTACCCACCAAA AAATAAGCATAATTGAGGTAGAAACGCCGAAAAGTAGCATACGCACGAGA AAAAGCATAGGCAAAAATGAGCACGAGCATAATAGCCTCTTTTCCGCCGC CTCTGCTTTGCCGAAAAAATAAGCAGAAAAAAAGGAAAAATAAGCAGAAT GGATGAGAGCCTAAAGTTTAGCGCGTGAGCTGGCAAGCGGGTTCGTGTGC AGTCCCATTTTTGTTGTTTTCCGATGTTCGTTTACCTTACAACTTGCAAC CCTCTTCCTTTCCACCGAAGCTTCCGGAGCATTTGCCGACCATGCGGGCC GTGAGATCTGGTGCACAGCAGCGTTGCTGTTTTTTGTGTGCCTTCTACCT TGTTCTGGGTTGGCGACAAAGACGCAGCGTCTCGTGACAGCTTAGCATGG TTCAAGCTAGATCTGGGCCATAAAGATGTCCTGTTGCGATTTTTGATCCG GTCCGACATATTGCGGCGTGTTTTGCACAGATGTTCTCCGCTGGCAATTT TGATTTCATTCCAGAACTTTGGTCGTTGTATGCACCGGTAACTATCGTGG GGTAGAGGTGTCCAGCAGATTCCACATAGGCTCCCGTGAACATTTTGTAG ATTCATACACGATGTAGCCGCAGGACTACATTTGTCCGCGTGTACGTTTT CTGTTTACTGTAGTGTTCGGCACGTTGGCCAGAAAATTATTCGGTGTTGG GTTTAGAAAAGGCACTAGCAGCGTGTTGTCGAGAAAACCCTGGTGACAAA ACTCGGTCGCGTGTGATTGATGCCGACGTGGGTATGACGTGTGCAGACCG GCACCTTTAAGATACAAGGAAAACTTTTTTGTGGCGATGTGCTTGTAAAA ATTATGTCCATCAACATCGAAACCCTTTGTTTTTGCAATTCGGCCTCGTG GCCACGCTCCTTCGCGCAGCAACAGCAGCCAGTAACCAACAGTGTGTGTA GTGTCTACAGCAGTCACGTGACGCGACCCAATTATGAGGGCGAGGCGTTG TACACCTGTCCCCACAGGAGACGGAATTCGGAGCCGTTGACGAATCCCAC TGCTCTGAGACTGCTTCTGTGGAGGGAAGTAACCGCTGGCCCACCGAGAC CATGGAAGCGGGAGCTCCCTACAGCGGTGACAGCGTTCAAGCGGGGGGAG CTGCGGAGCCCACGACAGAGGTGAGGATATTTTGCTCGTGGCTCCTGTTT TGATCTACCAATGGTTTTGAGCACGATCTTCTCGCCGTGAATGTGCAAAG CCTCACGCTTCTTTGAACTCCTCTTTTTTCTTCGCAGACTCTTGAGGAGG TCAAGCGGCTTCTCGCGGACAGGAAGCCATGGCCTGCGTTTCTTCACGCC GGGTTGGCAAGCGATTGCCCGGAAAATGTGGGGGAAGCATTGGCGTGGAT GGCATCAGGAGCGGTAGGGCTCTTGAATGTCGCGAGTGTGGGGCCGCTCG TGCCCGTCTGCGAGGCCTTCAAGGGGCTGATCCAGGCGGCGGAGGGGGCG GCGGAGGCAGACGAGAAGCTGAGGGAACTGATCAGCTGGTGCGCCTTCCT TACTGAAGTCTTGCTCCAGCACGGGAAGGAGTTGGACGATCTCGCGCCCG TTAGGAATCCCCTGGTTGCCTTTGTTTCCACCACAAACAAACTGGCGAAG CGTGCGAAAACGTTGGCGGCGAGAGGGAAGTGCACGGCATTGCTCTGCTT TTGGAGGGACCGAAAACAGATCCAAGAATTCGACGCGAAGCTCCGCAAAA TTTGGGAAGACATTCAAGGGCACACTATCTTAGATATTGGCGCTCTGATC CGACGTGGACTTCCACCCAAAACGGGCGAGATGGCCAAGGTACCCCAAAA CGCTCGAGTCCTACCGCCGGCGTTTGTTGAACGGAGCGACCTTGTCGAAG CTGTTGTGCATGAACTCGTGGCGACGGACCGGGCGACCGAAAAAGCTCAC GTGCTCCATGGCATACCCGGGGGGGGCAAGACCGTCACCGCCAGTGCAGT CGTGCGCTGCGAGGACGTGCGCCGAAGCTTCCAGGACGGGATCTTCTGGG TGCAAGTAGGACAAGTTGGCACGGGCAATCCATTGGCCCTGCTGAAGGGC TTGGCGGAAGATCTTGCGCATGCGCCCTCCAATCGGCCACACACGGTCCC GCACGAATTCAGGGACGTCGATCACGTGATCAGTCATCTTGTGGGCGTTC GCAAGCAGAGCAACCTACGCTGCCTGATCGAGCTGGATGATGTATGGGAC CCTCAGATGGTTCCGTTGTTCCTGCGTACAGGGTTTCATTGCTTGGTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig847:96588..100085-

>mRNA_P-littoralis_Contig847.23.1 ID=mRNA_P-littoralis_Contig847.23.1|Name=mRNA_P-littoralis_Contig847.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1080bp|location=Sequence derived from alignment at P-littoralis_Contig847:96588..100085- (Pylaiella littoralis U1_48)
ATGGAAGCGGGAGCTCCCTACAGCGGTGACAGCGTTCAAGCGGGGGGAGC
TGCGGAGCCCACGACAGAGACTCTTGAGGAGGTCAAGCGGCTTCTCGCGG
ACAGGAAGCCATGGCCTGCGTTTCTTCACGCCGGGTTGGCAAGCGATTGC
CCGGAAAATGTGGGGGAAGCATTGGCGTGGATGGCATCAGGAGCGGTAGG
GCTCTTGAATGTCGCGAGTGTGGGGCCGCTCGTGCCCGTCTGCGAGGCCT
TCAAGGGGCTGATCCAGGCGGCGGAGGGGGCGGCGGAGGCAGACGAGAAG
CTGAGGGAACTGATCAGCTGGTGCGCCTTCCTTACTGAAGTCTTGCTCCA
GCACGGGAAGGAGTTGGACGATCTCGCGCCCGTTAGGAATCCCCTGGTTG
CCTTTGTTTCCACCACAAACAAACTGGCGAAGCGTGCGAAAACGTTGGCG
GCGAGAGGGAAGTGCACGGCATTGCTCTGCTTTTGGAGGGACCGAAAACA
GATCCAAGAATTCGACGCGAAGCTCCGCAAAATTTGGGAAGACATTCAAG
GGCACACTATCTTAGATATTGGCGCTCTGATCCGACGTGGACTTCCACCC
AAAACGGGCGAGATGGCCAAGGTACCCCAAAACGCTCGAGTCCTACCGCC
GGCGTTTGTTGAACGGAGCGACCTTGTCGAAGCTGTTGTGCATGAACTCG
TGGCGACGGACCGGGCGACCGAAAAAGCTCACGTGCTCCATGGCATACCC
GGGGGGGGCAAGACCGTCACCGCCAGTGCAGTCGTGCGCTGCGAGGACGT
GCGCCGAAGCTTCCAGGACGGGATCTTCTGGGTGCAAGTAGGACAAGTTG
GCACGGGCAATCCATTGGCCCTGCTGAAGGGCTTGGCGGAAGATCTTGCG
CATGCGCCCTCCAATCGGCCACACACGGTCCCGCACGAATTCAGGGACGT
CGATCACGTGATCAGTCATCTTGTGGGCGTTCGCAAGCAGAGCAACCTAC
GCTGCCTGATCGAGCTGGATGATGTATGGGACCCTCAGATGGTTCCGTTG
TTCCTGCGTACAGGGTTTCATTGCTTGGTG
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