prot_P-littoralis_Contig847.19.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig847.19.1
Unique Nameprot_P-littoralis_Contig847.19.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length56
Homology
BLAST of mRNA_P-littoralis_Contig847.19.1 vs. uniprot
Match: A0A6H5J7J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J8_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 1.150e-10
Identity = 26/41 (63.41%), Postives = 37/41 (90.24%), Query Frame = 0
Query:   14 EKYTEAISLLKRALSIRTKKLGEDHPYTVGTRNSLEIMRKE 54
            E+YT+A+ LL+RALSIR KKLGE+HP TV T+NSL+++R++
Sbjct:    2 EQYTDAVPLLERALSIRMKKLGENHPDTVSTQNSLDVVRRK 42          
BLAST of mRNA_P-littoralis_Contig847.19.1 vs. uniprot
Match: D8LKS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS1_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 4.420e-7
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0
Query:   12 NQEKYTEAISLLKRALSIRTKKLGEDHPYTVGTRNSLEIMRKEV 55
            +Q K+ EA+ LL+RA SIR KKLGE+H YTV T+ SLE ++K V
Sbjct:   18 SQGKHNEALPLLERASSIRGKKLGENHHYTVDTQISLERVQKHV 61          
BLAST of mRNA_P-littoralis_Contig847.19.1 vs. uniprot
Match: A0A350X6N5_9CYAN (Kinesin (Fragment) n=1 Tax=Cyanobacteria bacterium UBA11372 TaxID=2055768 RepID=A0A350X6N5_9CYAN)

HSP 1 Score: 47.4 bits (111), Expect = 3.630e-5
Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    3 LNNRAVLLHNQEKYTEAISLLKRALSIRTKKLGEDHPYTVGTRNSLEIM 51
            LN + V L+ Q KY EAI L +RAL+IR K LG +HP    + N+L ++
Sbjct:   47 LNQQVVELYQQGKYAEAIPLAQRALAIREKALGSEHPDVAASLNNLGLL 95          
BLAST of mRNA_P-littoralis_Contig847.19.1 vs. uniprot
Match: A0A2N6AXI2_9HYPH (SPOR domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2N6AXI2_9HYPH)

HSP 1 Score: 48.5 bits (114), Expect = 4.700e-5
Identity = 24/37 (64.86%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    3 LNNRAVLLHNQEKYTEAISLLKRALSIRTKKLGEDHP 39
            LNN A++   Q +Y EAISL KRAL+IR KKLG DHP
Sbjct:   94 LNNLAIVYQKQGRYDEAISLHKRALAIREKKLGRDHP 130          
BLAST of mRNA_P-littoralis_Contig847.19.1 vs. uniprot
Match: A0A6H5KN14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN14_9PHAE)

HSP 1 Score: 48.1 bits (113), Expect = 5.020e-5
Identity = 30/58 (51.72%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    5 NRAVLLHN-------QEKYTEAISLLKRALSIRTKKLGEDHPYTVGTRNSLEIMRKEV 55
            N A +LH+       QEKYT         L IRTKKLGE+HP TV TRNSLE +R++V
Sbjct:  160 NSATVLHSLAGVLIAQEKYTRR-HFHHWMLRIRTKKLGENHPDTVWTRNSLEYVREKV 216          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig847.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5J7J8_9PHAE1.150e-1063.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKS1_ECTSI4.420e-759.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A350X6N5_9CYAN3.630e-546.94Kinesin (Fragment) n=1 Tax=Cyanobacteria bacterium... [more]
A0A2N6AXI2_9HYPH4.700e-564.86SPOR domain-containing protein n=1 Tax=Hyphomicrob... [more]
A0A6H5KN14_9PHAE5.020e-551.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13374TPR_10coord: 1..39
e-value: 2.6E-10
score: 39.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..54
e-value: 1.1E-13
score: 53.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig847contigP-littoralis_Contig847:90392..90955 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig847.19.1mRNA_P-littoralis_Contig847.19.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig847 89561..91741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig847.19.1 ID=prot_P-littoralis_Contig847.19.1|Name=mRNA_P-littoralis_Contig847.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=56bp
MWLNNRAVLLHNQEKYTEAISLLKRALSIRTKKLGEDHPYTVGTRNSLEI
MRKEV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf