mRNA_P-littoralis_Contig846.12.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig846.12.1 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE) HSP 1 Score: 261 bits (667), Expect = 2.540e-77 Identity = 141/327 (43.12%), Postives = 180/327 (55.05%), Query Frame = 1
Query: 1 RYGDLAAVQDADAAELMGSLAFDCVHLNKNGLSYAPNGAGLTGLVDDTTFFNPIFAENGEEEPDLEKTLGKIIATQHVEL-----------------------------------------------------------------RAGTFKFGAFSQGDAEKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNGK 786
+YG LAA QDAD +LMG L +D +HLNKNG S+APNG G TGLVD+T FFNPI+ G ++E TL KI+ATQ+VE+ A F + +G E SFA F V F HPVH +FNMSDP HILKKI NA WHSD+ KQR L MWC + K +FSLKT +R Y VE D DS++ EER A+++ F + G FNR ++ CMNV +S+KV+SGT+VR I +V+ ++ T GESPDL L CY LA ++ F+DIFNG+
Sbjct: 609 KYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETAFFNPIYKHEGGVVKEVEPTLEKIVATQYVEMFFVSIGKPEYKFVVWREAVRSLSTDYIQRMLIRVMRYLAMAHPDKAFDVVATICDGAPEHRSFQTHAAILGFCHWIKGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERPATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNGE 935
BLAST of mRNA_P-littoralis_Contig846.12.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 261 bits (666), Expect = 7.900e-77 Identity = 141/326 (43.25%), Postives = 179/326 (54.91%), Query Frame = 1
Query: 1 RYGDLAAVQDADAAELMGSLAFDCVHLNKNGLSYAPNGAGLTGLVDDTTFFNPIFAENGEEEPDLEKTLGKIIATQHVEL-----------------------------------------------------------------RAGTFKFGAFSQGDAEKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNG 783
+YG LAA QDAD +LMG L +D +HLNKNG S+APNG G TGLVD+TTFFNPI+ G ++E L KI+ATQ+VE+ A F + +G E SFA F V F HPVH +FNMSDP HILKKI NA WHSD+ KQR L MWC + K +FSLKT +R Y VE D DS++ EER A+++ F + G FNR ++ CMNV +S+KV+SGT+VR I +V+ ++ T GESPDL L CY LA ++ F+DIFNG
Sbjct: 518 KYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGVVKEVEPILEKIVATQYVEMFFVSIGKPEYKFVVWREAVRSLSTDYIQRMLIRAMRYLAMAHPDKAFDVIATECDGAPEHRSFQTHAAILGFCHWIKGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERAATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNG 843
BLAST of mRNA_P-littoralis_Contig846.12.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 252 bits (643), Expect = 6.220e-75 Identity = 118/167 (70.66%), Postives = 137/167 (82.04%), Query Frame = 1
Query: 286 EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNGK 786
+++ FPVAF HPVH GPIFNMSDPPHILKKIAN CWHSD K+R LAMWC DE GN LVRFSL T ER Y VENDG++LS EE+VASI+TFR + P CFNRNSWNCMNV S+KVLSGT+V +I+KVQ D +TMG+ DLEL+CYAALA+++DAFIDIFNGK
Sbjct: 362 QRNSVSFPVAFPHPVHLGPIFNMSDPPHILKKIANTCWHSDQDSKKRELAMWCGDEEGNTDLVRFSLATAERVYNQVENDGNTLSQEEKVASITTFRKVVPSCFNRNSWNCMNVSYSAKVLSGTIVCMIEKVQRDLLTMGKPLDLELDCYAALAAKMDAFIDIFNGK 528
BLAST of mRNA_P-littoralis_Contig846.12.1 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE) HSP 1 Score: 225 bits (573), Expect = 5.360e-65 Identity = 134/366 (36.61%), Postives = 172/366 (46.99%), Query Frame = 1
Query: 1 RYGDLAAVQDADAAELMGSLAFDCVHLNKNGLSYAPNGAGLTGLVDDTTFFNPIFAENGEEEPDLEKTLGKIIATQHVEL---------------------------------------------------------------------------------------------------------RAGTFKFGAFSQGDAEKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNG 783
+ G LAA QD D A+LMG LA+D +HLNKNG S+APNG G TGLVD+TTFFNPI+ G ++E L KI+ATQ+VE+ A F + +G E SF F V HPVH +FNMSDP HILKKI NA WHSD+ KQR L MWC + K +FSLKT +R Y VE D +S++ EER A+++ F + FNR ++ CMNV +S+KV+SGT+VR I +V+ +R T GE PDL L CY ++ F+DIFN
Sbjct: 376 KNGKLAATQDTDKADLMGVLAWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGIVKEVEPILEKIVATQYVEMYFVSVGKPEYKFVVWREAVRSLSTDFIQRMLIRVMRSLAMAHPDKAFDVIATVCDGAPGQLGEVTLVVAKWMTLERPCVEPYFMIGPFPLVAPSRTPLDSRSFQTHAAISGFCRWIKGPQEGSFTSFKVGILHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNNSITPEERAATLTIFPGMPVSAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANRETRGEPPDLALGCYEG---HLNDFVDIFNA 738
BLAST of mRNA_P-littoralis_Contig846.12.1 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE) HSP 1 Score: 137 bits (346), Expect = 3.560e-33 Identity = 78/232 (33.62%), Postives = 132/232 (56.90%), Query Frame = 1
Query: 109 NGAGLTGLVDDTTFFNPIFAENGEEEPDLEKTLGKII--ATQHVELRA--GTFKFGAFSQGDA--EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALA-MWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNG 783
+G ++ ++D+ T N ++ + +++ D+ +G + A +H + T F +++ D+ E+ ++PVAF+HP H GP+FNMSDP H+LKK+ NA W+S L K+R L +W +L FSLKT E+A+R E + + ER A++ F + C +R+S CM+V +S+K +S T + +I Q + + + P EL CYA +A ++ F+DI NG
Sbjct: 468 SGPKISRMLDEIT--NKLYEAHEDKKFDV---IGTVCDGAAEHRSFQQHFATTTFSEWAKSDSVFEQRHKDYPVAFKHPHHDGPVFNMSDPVHLLKKVVNALWYSGLDSKERHLQNLWWNPLTDAPELASFSLKTLEKAWREEEGHRANRTAAERAATLRRFLKMDAACLDRDSHTCMSVKLSAKCVSKTAMHVIASAQGKLLALDKPPSGELACYADVAEVMNDFLDIMNG 694
BLAST of mRNA_P-littoralis_Contig846.12.1 vs. uniprot
Match: D8LK65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK65_ECTSI) HSP 1 Score: 123 bits (308), Expect = 4.460e-30 Identity = 61/131 (46.56%), Postives = 83/131 (63.36%), Query Frame = 1
Query: 259 FGAFSQGDA--EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALA-MWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSK 642
F +++GD+ EK +F VAF+HP HGGP+FNMSDP H+LKK+ NA WHSD+ KQR L +W + + + V FSLKT E+ ++ E G S E+ A + F P F RNS NCM+VG+S+K
Sbjct: 131 FSEWARGDSAFEKRMGDFKVAFKHPSHGGPVFNMSDPVHLLKKVVNALWHSDIPSKQRDLKKLWYNEAAEDYEWVSFSLKTLEKVWKEEEAGGGVRSVAEQAAHLIRFLKFDPEMFTRNSHNCMSVGLSAK 261
BLAST of mRNA_P-littoralis_Contig846.12.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 127 bits (318), Expect = 1.530e-29 Identity = 77/186 (41.40%), Postives = 105/186 (56.45%), Query Frame = 1
Query: 232 VELRAGTFKFGAFSQGDAEKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALA--MWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNG 783
+L TF A + E+ FA+FP+AF HP HG P+FNMS PPH+L + NA W+S L KQR L W D E V FSLKT E + E G SLS E +++ F +P +RNS NCM+V +S+K +S T V + Q +++ SP+ E+ CYA LA ++ F+DI NG
Sbjct: 295 TKLATSTFGEWADPKSRLEERFADFPMAFNHPHHGEPVFNMSGPPHLLX-VVNALWYSSLPSKQRHLKNLFWNRDTEEFE-WVSFSLKTLETVWVNEERGGGSLSAAEVASNLRRFLKFEPEMLDRNSHNCMSVRLSAKCVSRTAVYVCGCAQ-EKLA---SPNGEIACYAELAEVMNDFLDIMNG 474
BLAST of mRNA_P-littoralis_Contig846.12.1 vs. uniprot
Match: A0A6H5KYD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD6_9PHAE) HSP 1 Score: 116 bits (290), Expect = 3.670e-29 Identity = 59/116 (50.86%), Postives = 74/116 (63.79%), Query Frame = 1
Query: 301 EFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRAL-AMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKV 645
+F VAFRHP HG P+FNMS+P H+LKK+ NA WHS LA KQR L +W + E+ V FSLKT E + E G S E+ A +S FR + P F RNS NCM+V +S+KV
Sbjct: 5 DFKVAFRHPQHGRPVFNMSEPVHLLKKVVNALWHSGLADKQRDLKGLWWDPKTEEEEWVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFYRNSHNCMSVKLSAKV 120
BLAST of mRNA_P-littoralis_Contig846.12.1 vs. uniprot
Match: D7G5R1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R1_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 2.900e-19 Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 1 RYGDLAAVQDADAAELMGSLAFDCVHLNKNGLSYAPNGAGLTGLVDDTTFFNPIFAENGEEEPDLEKTLGKIIATQHVEL 240
+YG LAA QDAD A+L G L++D HL+KNGL +AP LTGLVD+ TFFNP++ +E+ L K LGKI+ATQ+VE
Sbjct: 136 KYGRLAAEQDADKADLTGVLSWDLTHLSKNGLDFAPKEGRLTGLVDEATFFNPVYQGKVDEDGGLGKQLGKILATQYVEF 215
BLAST of mRNA_P-littoralis_Contig846.12.1 vs. uniprot
Match: D7FVM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM8_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 3.870e-19 Identity = 43/79 (54.43%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 1 RYGDLAAVQDADAAELMGSLAFDCVHLNKNGLSYAPNGAGLTGLVDDTTFFNPIFAENGEEEPDLEKTLGKIIATQHVE 237
+YG LAA QDAD A+L G L++D HL+KNG +AP G TGLVD+ TFFNP++ +E+ DL+K L KI+AT++VE
Sbjct: 195 KYGRLAAEQDADKADLTGVLSWDLTHLSKNGFDFAPKEGGFTGLVDEATFFNPVYQRKVDEDGDLDKQLDKILATKYVE 273 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig846.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig846.12.1 >prot_P-littoralis_Contig846.12.1 ID=prot_P-littoralis_Contig846.12.1|Name=mRNA_P-littoralis_Contig846.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=263bp RYGDLAAVQDADAAELMGSLAFDCVHLNKNGLSYAPNGAGLTGLVDDTTFback to top mRNA from alignment at P-littoralis_Contig846:95495..97414+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig846.12.1 ID=mRNA_P-littoralis_Contig846.12.1|Name=mRNA_P-littoralis_Contig846.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1920bp|location=Sequence derived from alignment at P-littoralis_Contig846:95495..97414+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig846:95495..97414+ >mRNA_P-littoralis_Contig846.12.1 ID=mRNA_P-littoralis_Contig846.12.1|Name=mRNA_P-littoralis_Contig846.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=789bp|location=Sequence derived from alignment at P-littoralis_Contig846:95495..97414+ (Pylaiella littoralis U1_48)back to top |