mRNA_P-littoralis_Contig845.14.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig845.14.4 vs. uniprot
Match: A0A6H5L0N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N2_9PHAE) HSP 1 Score: 761 bits (1966), Expect = 1.190e-246 Identity = 703/1383 (50.83%), Postives = 813/1383 (58.79%), Query Frame = 1
Query: 43 GTDIRGLAAHSQKLAMAMGSDSQEARQAIGRLAPDHSCAVISIHETLLAVTGKLDA-VKTRKEELLALTKVCGFITAASIXXXXXXXXXXXXXXXXTSKMVVR------------------------------------RLLNLGPLEECVDDLELLVKRLGKRRAPLLRRSNSIFKIKSEVEGIHSRVIDLTKDMGLAGVLAVFRGVLEGTGGEGGSHXXXXXXXXXXXGSDSCGLLTEQEVNLARLPVE---QARVPSLVPARESWHVRRERVISTVLESLACQSRAGVDGIPLAGAGGGGSGDVRNAQR------------------PQVVGLVGESGSGKTATAAEIVRSPEVLEYFSDGVVWLPVNEGDGSKARLPSLMHRLVGMVNEDIASRNDGIGDTCGEDTDICDSAEDSVAYVRGIVEGGGELRD---------------------------------------GVRQQGRQLRCLVVADNVWEKEVVAKLRKTGMWVLLTSRKVEMIQEAGGHPVVIGRLVEADAVRVSRRAAELPSDEPSPLGAKDLAELCGRMALELSFVGRWNNVRGSKDPMAWQAAADNIRADLQRLERKKANTRGSGVTGEIDAEDSSACGKNKVKQQQQQAEPSWSTNDSEAHTLPASEDGGDVAVSTCASSPSSGSTTHD--------------ARGNRRRAVLLAGFRRLVDRTGGDDILRGLYIALAVLPDSHEFTAKDAAVLLH-ESHHRPGAG----GGETGTDEPGGEKDEEXXXXXXXXXKALKTLETRGILVPAGKRMGSRGNGSTNNASYRMHHAHWSFARKVLLKYHEIRGWAVRRWTRFLSSLDAVLFFDPAVLARLWRAVEDVGGTSWREGRPYETALSKIDDGDNLHRVCLVAAAKFRSTEEDWDGASLMWRRLLAVEHQAQEPNVMYPLWELVNAAEKNNKPQEAKSWRQAGYEALTQVMTRSTPMRSFFTGAGGSGHTPRGGSSNDP------------------ADTTSVVRSLTLNMARFGPSKGAEAEKILRRAVEIEVSRRGPDDTRVAAMLQRLGICVRQAGRLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRGRQEXATNLFERALTXXXXXXXXXXXXXXXXXXXXXXXXX----QEGRMGEAEALFLRALRIKKATE-LRAKGHADAATLASTGTINRTARSTSDSYD----------SDN----SEVSVALATFQLGVCFLQGGQRLDKAEAMLRSALAMEEERLGPEHLXXXXXXXXXXXXXXXXXXXXXXESMLMRCVKTLKTKLGADHSEVTAAYKMLDLCAPTE 3732
G D+R LAA SQKLA+AM S + +A+ + RL DHS AV IHE+LLA+T K+D VKTR+EELLA+ K+C + AAS+ XXXXXX R RLL++GPL ECV+ L LV R RR LLRRS S IK E+ ++ RV+D ++MGLAG+LAVF+GVLE TGG GS SD +LT+QEV+LAR P +ARVPSL+P RESWHVRRE VI TVL SL L+ GG S P+VVGLVGESG+GKTATAAEIVR PEVLEYFSDGVVWLPVNEGDG + RLPSLM RL ++ E++ ++ G G +Q R LRCLV DNV E EVVA L +TG+WVLLT+R ++I GG PVVIGRL+E DA V RRA+ELP DEP P GA++L ELCGR L+L+FVGRW+ V GSKDPMAW+ AAD+IRA+L LE +T E D SS KV EDG +V T + R ++R+A+L AGFR LV GDD R LY++LAVLPD HEFT KDAAVLLH + R G G G G XXXXXXXX + L+ LE RGIL +G R G R +++ +S+RMH AH +FAR++LL +I GWAV RW FLSSLDAVLFFDP LARLW AVEDVGG WR+GRPYETAL ID+ D L RVCLVA AKFR E DWDGASLMWRRLL VE +AQEPNVMYP+WELVNAAE KP+EA +WR+ G E L M +ST M TGA SG ADT SV+RSL LN+ RFGPS G EAE +LRRA+EIEV+RRGPDD +VA L RLG+CVRQAGRL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S RG A XXXXXXXXXXXXXXXXXXXXXXXXX ++GR+ EAEA RAL IK+A L A+G AAT A + RS+S S S N E SV LA FQLGVC LQGG+RL++AE +LR+AL +E +RL XXXXXXXXXXXXXXXXXXXX E +L CVKTL+ +LGA H EV AA MLD CA TE
Sbjct: 24 GADVRDLAADSQKLAIAMASKTPDAQYTVQRLVADHSPAVKGIHESLLAITAKIDLEVKTRREELLAVAKMCTLVAAASVVVVSQEHEQEXXXXXXXXXXEQRHGPSWKGTARSATCGSDNXXXXXXXXXXXXCSERMMRLLDVGPLRECVEALGFLVGRKDARRRTLLRRSGSS-SIKDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGI--------SD---VLTQQEVDLARQPKRSPPRARVPSLLPRRESWHVRRELVIGTVLRSL------------LSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGPRQRRPLRCLVAVDNVCEAEVVATLAETGVWVLLTTRDWDVIPRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTVLDLAFVGRWSTVCGSKDPMAWRNAADSIRAELNNLE----------LTREDDDARSSVTVAGKVXXXXXXXXXXXXXXXXXXXXXXI-EDGAPASVITGSEXXXXXXXXXXXXXXXXXXXXXXXHGRESQRKAILRAGFRDLVS-VAGDDDSRLLYLSLAVLPDGHEFTVKDAAVLLHGDGSARCGDGIVAAAGGRGXXXX-------XXXXXXXXRRVLRVLEARGILTASGGR-GGRRRSASSPSSFRMHEAHSAFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRGAEGDWDGASLMWRRLLTVEQRAQEPNVMYPVWELVNAAENGGKPEEAAAWRRYGRETLNLAMVKST-MVPPETGARDSGXXXXXXXXXXXXXXXXXXXXXXXXXPKRSADTASVLRSLALNIVRFGPSHGVEAEMMLRRALEIEVARRGPDDPQVAVTLGRLGVCVRQAGRLKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSRGGGGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRDGRVQEAEAFLRRALGIKEAAAALEAEGGV-AATGAGGARPALSRRSSSGSXXXXXXXXXXXXSSNRNGVDEDSVGLAMFQLGVCVLQGGRRLEEAETLLRNALDVETQRLXXXXXXXXXXXXXXXXXXXXXXXXXEAERVLGECVKTLEARLGAGHEEVAAAKSMLDSCAATE 1360
BLAST of mRNA_P-littoralis_Contig845.14.4 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 409 bits (1051), Expect = 1.180e-118 Identity = 318/957 (33.23%), Postives = 454/957 (47.44%), Query Frame = 1
Query: 49 DIRGLAAHSQKLAMAMGSDSQEARQAIGRLAPDHSCAVISIHETLLAVTGKLDAVKTRKEELLALTKVCGFITAASIXXXXXXXXXXXXXXXXTSKMVVRRLLNLGPLEECVDDLELLVKRLGKRRAPLLRRSNSIFKIKSEVEGIHSRVIDLTKDMGLAGVLAVFRGVLEGTGGEGGSHXXXXXXXXXXXGSDSCGLLTEQEVNLARLPV---EQARVPSLVPARESWHVRRERVISTVLESLACQSRAGVDGIPLAGAGGGGSGDVRNAQRPQVVGLVGESGSGKTATAAEIVRSPEVLEYFSDGVVWLPVNEGDGSKARLPSLMHRLVGMVNEDIASRNDGIGDTCGEDTDICDSAEDSVAYVRGIVEGGGELRDGVRQQGRQLRCLVVADNVWEKEVVAKLRKTGMWVLLTSRKVEMIQEAGGHPVVIGRLVEADAVRVSRRAAELPSDEPSPLGAKDLAELCGRMALELSFVGRWNNVRGSKDPMAWQAAADNIRADLQRLERKKANTRGSGVTGEIDAEDSSACGKNKVKQQQQQAEPSWSTNDSEAHTLPASEDGGDVAVSTCASSPSSGSTTHDARGNRRRAVLLAGFRRLVDRTGGDDI-LRGLYIALAVLPDSHEFTAKDAAVLLHE----SHHRPGAGGGETGTDEPGGEKDEEXXXXXXXXXKALKTLETRGILVPAGKRMGSRGNGSTNNASYRMHHAHWSFARKVLLKYHEIRGWAVRRWTRFLSSLDAVLFFDPAVLARLWRAVEDVGGTSWREGRPYETALSKIDDGDNLHRVCLVAAAKFRSTEEDWDGASLMWRRLLAVEHQ---AQEPNVMYPLWELVNAAEKNNKPQEAKSWRQAGYEALTQVMTRSTPM-RSFFTGAGGSGHTPRGGSSNDPADTTSVVRSLTLNMARFGPSKGAEAEKILRRAVEIEVSRRGPDDTRVAAMLQRLGICVRQAGRL 2883
DI AA + +LA+ +GS +A L + + + +TL A+ ++ VK +EEL AL + C +ITA + ++ +++ PL++CV+ + +R +R + R F KSE+ G++S V LT D+GLAG+ AV G ++ D L + L LP + A VP P R+SWHV R ++TVL++L RA VV L G SGSGKT AAEIVRS EV E FSDG+VWLPVNEG +K RLPSLM +L MV+E+I G + G + ++EDS Y++ +E G +GR+L+CLVVADNVWE++VV+KL +TGMWVLL++R +++ + G VV+ L +ADA V +RAAELP + P A DL +LCGR+A++++FVGRW+ VRG DP +W AA IR +++++ NDS A +PA RR+A+L GF L G DD ++ LY++LAV+PD H F+ KDAAVLL++ + AGG + LE I+ A +YRMH AH FAR+ LL +R A++RWTR+LSSLD + D VL LW A+E +GG W + RPYE AL + + D L R A F+ +ED +GAS WRRLL VE + A P V+ L AE+ +EA W + E L + R + RS + D AD+ S V + L F P A AE +LRR+++++ + GP+ +VA L++LG+ R+AGRL
Sbjct: 4 DISDSAAEAARLALEIGSTISDAVSCAVDLGEELP-VIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCR----------------LIESEVDVAPLKDCVEAAKNFAERCSRRGK--VSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGI-AVLEGKVD----------------------DMKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRA------------------------CVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEG--AKKRLPSLMLQLARMVHEEI-------GGSVGR---VPSASEDSATYIKQRLEEG--------HKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDP-------------------------------------DNDS-AENIPA---------------------------KRRKAILQGGFEDLA--IGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGG-------------------------VVDVLERWSIIRSA-------------QGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEVEGLPLALARMNALVRSGLE------------ADLDDADSLSSVAATALE---FRPGDRALAETLLRRSLDVKEAILGPEHLQVADTLRQLGVSAREAGRL 754
BLAST of mRNA_P-littoralis_Contig845.14.4 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 399 bits (1024), Expect = 1.450e-114 Identity = 314/943 (33.30%), Postives = 446/943 (47.30%), Query Frame = 1
Query: 79 KLAMAMGSDSQEARQAIGRLAPDHSCAVISIHETLLAVTGKLDAVKTRKEELLALTKVCGFITAASIXXXXXXXXXXXXXXXXTSKMVVRRLLNLGPLEECVDDLELLVKRLGKRRAPLLRRSNSIFKIKSEVEGIHSRVIDLTKDMGLAGVLAVFRGVLEGTGGEGGSHXXXXXXXXXXXGSDSCGLLTEQEVNLARLP---VEQARVPSLVPARESWHVRRERVISTVLESLACQSRAGVDGIPLAGAGGGGSGDVRNAQRPQVVGLVGESGSGKTATAAEIVRSPEVLEYFSDGVVWLPVNEGDGSKARLPSLMHRLVGMVNEDIASRNDGIGDTCGEDTDICDSAEDSVAYVRGIVEGGGELRDGVRQQGRQLRCLVVADNVWEKEVVAKLRKTGMWVLLTSRKVEMIQEAGGHPVVIGRLVEADAVRVSRRAAELPSDEPSPLGAKDLAELCGRMALELSFVGRWNNVRGSKDPMAWQAAADNIRADLQRLERKKANTRGSGVTGEIDAEDSSACGKNKVKQQQQQAEPSWSTNDSEAHTLPASEDGGDVAVSTCASSPSSGSTTHDARGNRRRAVLLAGFRRLVDRTGGDDI-LRGLYIALAVLPDSHEFTAKDAAVLLHESHHRPGAGGGETGTDEPGGEKDEEXXXXXXXXXKALKTLETRGILVPAGKRMGSRGNGSTNNASYRMHHAHWSFARKVLLKYHEIRGWAVRRWTRFLSSLDAVLFFDPAVLARLWRAVEDVGGTSWREGRPYETALSKIDDGDN-LHRVCLVAAAKFRSTEEDWDGASLMWRRLLAVEHQ---AQEPNVMYPLWELVNAAEKNNKPQEAKSWRQAGYEALTQVMTRSTPMRSFFTGAGGSGHTPRGGSSNDPADTTSVVRSLTLNMARFGPSKGAEAEKILRRAVEIEVSRRGPDDTRVAAMLQRLGICVRQAGRL 2883
K+A MGS + + Q + L + + + TL + K++ VK E+L L + C +ITA I L++ PLE+CV+ +E V+R KR + R K ++ + R+ DL D+ LAG+ ++ + ++ + LL + E L +LP + A VP P +SWHV R V TV ++L A GG P +VGLVG+SG+GKT A+ IV S V E FSDG+VWLPVNEG LP LM +L MV EDI G + G ++D +AYV+ VE G G+ L+CLVVADNVWE +VV++L +TGMW+LL++R E+++ A G V + L EA+A V RRAAEL + P AKDL ELCGR+A++L+FVGRW+ VRG +D AW AA +RA++ + GVT E +N SE D+R NRRRA+L AGF L G DD ++ LY++LAVLPD H FT KDAAVLL++ EPG E + ++ LE I+ A+YRMH AH +FAR+ L+ ++R A++R R +SSL+A+ + L LW V+ VGG W RPYE AL +D+ ++ L R + A A F+ +EDW GA+ WRRLLAVE A P V+ L AE + +EAK W + ++AL M R+ +S G+ +G D + SL + P + EAE +LRR++EI+++ DD +VA + LG+C+R+AGRL
Sbjct: 14 KIASKMGSAAADVIQFVADLGEELPL-LQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYTE----------------LDVAPLEDCVNAVEKFVERYRKRGK--ISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALD--------------ADGG----------PHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDN--LPCLMLQLAQMVFEDI-------GGSVGRRPS---GSDDGLAYVKQQVENG--------HGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDK----------GGVTAE--------------------------SNGSE-----------------------------DSRVNRRRAILQAGFEDLA--IGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDR--------------EPGTEDEASVGG-------VVEALERWTIIRSV-------------EATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRKQHQALPLAMARA---QSKHVGSEAAG-----------LDDAGSLASLAATVITLHPGERGEAEMLLRRSLEIKMAELDQDDVQVAVVQHDLGVCIREAGRL 778
BLAST of mRNA_P-littoralis_Contig845.14.4 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 366 bits (940), Expect = 2.680e-104 Identity = 270/747 (36.14%), Postives = 366/747 (49.00%), Query Frame = 1
Query: 664 LARLPVEQARVPSLVPARESWHVRRERVISTVLESLACQSRAGVDGIPLAGAGGGGSGDVRNAQRPQVVGLVGESGSGKTATAAEIVRSPEVLEYFSDGVVWLPVNEGDGSKARLPSLMHRLVGMVNEDIASRNDGIGDTCGEDTDICDSAEDSVAYVRGIVEGGGELRDGVRQQGRQLRCLVVADNVWEKEVVAKLRKTGMWVLLTSRKVEMIQEAGGHPVVIGRLVEADAVRVSRRAAELPSDEPSPLGAKDLAELCGRMALELSFVGRWNNVRGSKDPMAWQAAADNIRADLQRLERKKANTRGSGVTGEIDAEDSSACGKNKVKQQQQQAEPSWSTNDSEAHTLPASEDGGDVAVSTCASSPSSGSTTHDARGNRRRAVLLAGFRRLVDRTGGDDI-LRGLYIALAVLPDSHEFTAKDAAVLLHESHHRPGAGGGETGTDEPGGEKDEEXXXXXXXXXKALKTLETRGILVPAGKRMGSRGNGSTNNASYRMHHAHWSFARKVLLKYHEIRGWAVRRWTRFLSSLDAVLFFDPAVLARLWRAVEDVGGTSWREGRPYETALSKIDDGDN-LHRVCLVAAAKFRSTEEDWDGASLMWRRLLAVEHQ---AQEPNVMYPLWELVNAAEKNNKPQEAKSWRQAGYEALTQVMTRSTPMRSFFTGAGGSGHTPRGGSSNDPADTTSVVRSLTLNMARFGPSK--GAEAEKILRRAVEIEVSRRGPDDTRVAAMLQRLGICVRQAGRL 2883
L++ + +VP PAR+SW+V+R V+ TV E LA GG P++VGLVG SGSGKT A+E VRS EV E FSDG+ WL VN DG+K RL SLM +L +V EDI G + G S++D AY+R ++ G G++L+CLVVADNVWEKEVV+KL +TGMWVLL++R + ++ EA G V + L EADA+ V RRAAELP P A DL ELCGR+A++L+FVGRW+ VRG +D MAW A +R ++ ++ GSG E AE T DAR R+A+L AGF L G DD ++ LY++LAV PD H FT +DAAVLL++ EP E + + TLE +L + +YRMH AH FAR+ L+ + +R AV+RW +S L+ + DP VL LW AVE VGG W + R Y AL +D + L R ++A A+ + EDW+GAS WRRLL +E + A +V+ L + AE+ + EA WR EAL + R G D + + S+ M +F P A+AE +LRR++EI+ + G +D VA L +LGIC+R+AGRL
Sbjct: 26 LSKTQAKLTKVPKGTPARKSWYVKRRHVMDTVFEGLASD-------------GG-----------PRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVN--DGAKERLSSLMLQLARVVYEDI-------GCSVGRRPT---SSDDCAAYIRQRMKKG--------TGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKV--------GSGDASEKLAE------------------------------------------------------TRDAR---RKAILRAGFEDLA--IGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDR--------------EPCAEDEASVAV-------VVDTLERWTVL-------------RSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEALPLALARVQSQTDSGKVEG--------------LDGANGLASVASTMLKFKPGSIDRAQAEVLLRRSLEIQEAALGHEDIAVADTLYQLGICLREAGRL 613
BLAST of mRNA_P-littoralis_Contig845.14.4 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 353 bits (906), Expect = 3.520e-100 Identity = 287/851 (33.73%), Postives = 389/851 (45.71%), Query Frame = 1
Query: 355 LNLGPLEECVDDLELLVKRLGKRRAPLLRRSNSIFKIKSEVEGIHSRVIDLTKDMGLAGVLAVFRGVLEGTGGEGGSHXXXXXXXXXXXGSDSCGLLTEQEVNLARL---PVEQARVPSLVPARESWHVRRERVISTVLESLACQSRAGVDGIPLAGAGGGGSGDVRNAQRPQVVGLVGESGSGKTATAAEIVRSPEVLEYFSDGVVWLPVNEGDGSKARLPSLMHRLVGMVNEDIASRNDGIGDTCGEDTDICDSAEDSVAYVRGIVEGGGELRDGVRQQGRQLRCLVVADNVWEKEVVAKLRKTGMWVLLTSRKVEMIQEAGGHPVV-IGRLVEADAVRVSRRAAELPSDEPSPLGAKDLAELCGRMALELSFVGRWNNVRGSKDPMAWQAAADNIRADLQRLERKKANTRGSGVTGEIDAEDSSACGKNKVKQQQQQAEPSWSTNDSEAHTLPASEDGGDVAVSTCASSPSSGSTTHDARGNRRRAVLLAGFRRLVDRTGGDDILRGLYIALAVLPDSHEFTAKDAAVLLHESHHRPGAGGGETGTDEPGGEKDEEXXXXXXXXXKALKTLETRGILVPAGKRMGSRGNGSTNNASYRMHHAHWSFARKVLLKYHEIRGWAVRRWTRFLSSLDAVLFFD-PAVLARLWRAVEDVGGTSWREGRPYETALSKIDDGDNLHRVCLVAAAKFRSTEEDWDGASLMWRRLLAVEHQ---AQEPNVMYPLWELVNAAEKNNKPQEAKSWRQAGYEALTQVMTRSTPMRSFFTGAGGSGHTPRGGSSNDPADTTSVVRSLTLNMARFGPSKGAEAEKILRRAVEIEVSRRGPDDTRVAAMLQRLGICVRQAGRL 2883
L PL ECV+ + V+R +R +L R K E+ G+ R+ DL D+ LAG+ V GG+ L ++ AR+ P A VP+ PAR+SWHV R V+ V ++L G GG P++VGLVG+SGSGKT AAEIVRS EV E FSDG+VWL VN DG+ RL +LM L +V EDI G + G D D AY R ++ G G+ L+CLVVADNVWE+ V++KL +TGMWVLL++R +++ A G VV + L E DA+ V RRA+EL + P A +L ELCGR+A++++FVGRW+ VRG D AW AA +R+ ++R S V+ + W D R RR+AVL AGF L + + I R LY++LAVLPD H FTAKDA LL++ P E T+E ++TLE L T +YRMH AH FAR ++ +R AV+RWT LSSLD + FD P VL LW AV +GG SWR RPY ALS++D+ + L L + F+ + DW AS RR+LAV+ + A P+ + L LV AE+ +E W+ L +V+ + AG D D + + S+ M P AE ++R ++EI+ + G DD VA L LG+ V AGRL
Sbjct: 75 LKATPLMECVNAVGAFVERCSRRG--MLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATV--------GGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALP-------------GEGG-----------PRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVN--DGATERLRALMMHLARVVFEDI-------GGSVGRRPAGLD---DGAAYTRQRMQSG--------HGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIER----------SRVSDNV-----------------------W-----------------------------------DIRAVRRKAVLQAGFEDLAIGSDDERIPR-LYLSLAVLPDGHAFTAKDATALLYDRAPCPED---EVSTEE------------------LIRTLERWSAL-------------RTEGGAYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQ----AELRRVLPLAVVRMQLRLDAG----------EVDGVDDANALNSIASTMLNLAPDDRGNAEALMRHSLEIQEVKLGRDDVYVAYNLHHLGVSVHLAGRL 754
BLAST of mRNA_P-littoralis_Contig845.14.4 vs. uniprot
Match: D8LJY3_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJY3_ECTSI) HSP 1 Score: 340 bits (872), Expect = 9.460e-98 Identity = 340/677 (50.22%), Postives = 392/677 (57.90%), Query Frame = 1
Query: 1789 RGNRRRAVLLAGFRRLVDRTGGDDILRGLYIALAVLPDSHEFTAKDAAVLLHESHHRPGAGGGETGTDEPGGEKDEEXXXXXXXXXKALKTLETRGILVPAGKRMGSRGNGSTNNASYRMHHAHWSFARKVLLKYHEIRGWAVRRWTRFLSSLDAVLFFDPAVLARLWRAVEDVGGTSWREGRPYETALSKIDDGDNLHRVCLVAAAKFRSTEEDWDGASLMWRRLLAVEHQAQEPNVMYPLWELVNAAEKNNKPQEAKSWRQAGYEALTQVMTRSTPMRSFFTGAGGSGHTPRGGSSNDPADTTSVVRSLTLNMARFGPSKGAEAEKILRRAVEIEVSRRGPDDTRVAAMLQRLGICVRQAGRLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKRGRQEXATNLFERALTXXXXXXXXXXXXXXXXXXXXXXXXXQEGRMGEAEALFLRALRIKKATE-LRAKGHADAATLASTGT----------------------------INRTARSTSDSYDSDNSEVSVALATFQLGVCFLQGGQRLDKAEAMLRSALAMEEERLGPEHLXXXXXXXXXXXXXXXXXXXXXXESMLMRCVKTLKTKLGADHSEVTAAYKMLDLCAPTE 3732
R ++R+A+L AGFR LV GDD R LY++LAVLPD HEFT KDAAVLLH G + XXXXXXXX + L+ LE RGIL +G R G R +++ +S+RMH AH FAR++LL +I GWAV RW FLSSLDAVLFFDP+ LARLW AVEDVGG WR+GRPYETAL ID+ D L RVCLVA AKFRS E DWDGASLMWRRLL VE +AQEPNVMYP+WELVNAAEK KP+EA +WR+ G E TLN+A G K EAE++LRRA+ IE +R G DD RVA L LG+C+R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G X XXXXXXXXXXXXXXXXXXXXXXX ++GR+ EAEA RAL IK+A L A+G +A+TG NR + D D SV LA FQLGVC LQGG+RL++AE +LR+AL +E +RLG XXXXXXXXXXXXXXXXXXX E +L CV+TL+ +LGA H EV AA MLDLCA TE
Sbjct: 98 RESQRKAILRAGFRDLVG-VAGDDDSRLLYLSLAVLPDGHEFTVKDAAVLLHGDGSARCGDGMAAASAXXXXXXXXXXXXXXXXXRRVLRVLEARGILTASGGR-GGRRKSTSSPSSFRMHEAHSGFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPSALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRSAEGDWDGASLMWRRLLTVEQRAQEPNVMYPVWELVNAAEKGGKPEEAAAWRRYGRE--------------------------------------------TLNLAMAGRLK--EAEQLLRRALTIEEARLGEDDPRVARTLFHLGVCLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLSSQGGGGD-------------------------------------GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRDGRVQEAEAFLRRALGIKEAAAALEAEGG-----VAATGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNR------NGVDED----SVGLAMFQLGVCVLQGGRRLEEAETLLRNALDVETQRLGXXXXXXXXXXXXXXXXXXXXXXXEEAERVLGECVETLEARLGAAHEEVAAAKSMLDLCAATE 674
BLAST of mRNA_P-littoralis_Contig845.14.4 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 244 bits (622), Expect = 2.290e-62 Identity = 176/515 (34.17%), Postives = 258/515 (50.10%), Query Frame = 1
Query: 58 GLAAHSQKLAMAMGSDSQEARQAIGRLAPD---------HSCAVISIHETLLAVTGKLDAVKTRKEELLALTKVCGFITAASIXXXXXXXXXXXXXXXXTSKMVVRRLLNLGPLEECVDDLELLVKRLGKRRAPLLRRSNSIFKIKSEVEGIHSRVIDLTKDMGLAGVLAVFRGVLEGTGGEGGSHXXXXXXXXXXXGSDSCGLLTEQEV--NLARLPVEQARVPSLVPARESWHVRRERVISTVLESLACQSRAGVDGIPLAGAGGGGSGDVRNAQRPQVVGLVGESGSGKTATAAEIVRSPEVLEYFSDGVVWLPVNEGDGSKARLPSLMHRLVGMVNEDIASRNDGIGDTCGEDTDICDSAEDSVAYVRGIVEGGGELRDGVRQQGRQLRCLVVADNVWEKEVVAKLRKTGMWVLLTSRKVEMIQEAGGHPVVIGRLVEADAVRVSRRAAELPSDEPSPLGAKDLAELCGRMALELSFVGRWNNVRGSKDPMAWQAAADNIRADLQRLERKK 1569
G AA KL + MGS + ++ + L D H V+ +TL A+ ++ V+ +EEL L + C ++TA + S+ ++L P+EEC++ LV+R G R + R + K E+ + + + DL D+ LAGV +LEG + + L + + L++ P + A++P P R+SWHV R V+ V E+L GG P +VGLVG+SGSGKT A+EIVRS EV + FSDGVVWL VN G +K RLPSLM +L M+ E++ R D D AY++ ++ G G+ L+CLVVADNVWEKEVV KL +TGMWVLL++R E++ + G V + + E +A V R+A+ELP + P A DL ELCGR+A++L+FVGRW+ VRG D AW AA +RA++ ++E ++
Sbjct: 7 GAAAEVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVL---KTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVK---------------SRQSSCSEMDLTPVEECLEAAGELVERCGGRGK--MTRVLNASSDKEEIARMKANIRDLEADLSLAGVA-----ILEGKTSD--LTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTA-------------VGG-----------PHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHG--AKDRLPSLMLQLAHMMCEEVGGRRPATSD-------------DGAAYIKEKMQRG--------HGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGER 447
BLAST of mRNA_P-littoralis_Contig845.14.4 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 219 bits (558), Expect = 7.610e-57 Identity = 138/310 (44.52%), Postives = 179/310 (57.74%), Query Frame = 1
Query: 640 LLTEQEVNLARLP---VEQARVPSLVPARESWHVRRERVISTVLESLACQSRAGVDGIPLAGAGGGGSGDVRNAQRPQVVGLVGESGSGKTATAAEIVRSPEVLEYFSDGVVWLPVNEGDGSKARLPSLMHRLVGMVNEDIASRNDGIGDTCGEDTDICDSAEDSVAYVRGIVEGGGELRDGVRQQGRQLRCLVVADNVWEKEVVAKLRKTGMWVLLTSRKVEMIQEAGGHPVVIGRLVEADAVRVSRRAAELPSDEPSPLGAKDLAELCGRMALELSFVGRWNNVRGSKDPMAWQAAADNIRADLQRLE 1560
LL QE+ + RLP +++A VP P R+SWHV R V TV+E+L AG P++VGLVG+SG+GKT AAE+VRS V E FSDG+VWL VN G + RLPSLM +L MV EDI R G + G + D AY++ +E G G+ L+CL VADNVWEKEVV+ L KTGM VLL++R E++ A G PV + L DA V R AAELP P A DL +LCGR+A++L+FVGRW+ VRG D +AW AA +RA++ ++E
Sbjct: 80 LLANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVERH-VTETVVEALT--GEAG----------------------PRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYG--ANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNAD---------AYIKQRMENG--------HGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIE 345
BLAST of mRNA_P-littoralis_Contig845.14.4 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 204 bits (520), Expect = 3.900e-50 Identity = 160/488 (32.79%), Postives = 219/488 (44.88%), Query Frame = 1
Query: 166 SIHETLLAVTGKLDAVKTRKEELLALTKVCGFITAASIXXXXXXXXXXXXXXXXTSKMVVRRLLNLGPLEECVDDLELLVKRLGKRRAPLLRRSNSIFKIKSEVEGIHSRVIDLTKDMGLAGVLAVFRGVLEGTGGEGGSHXXXXXXXXXXXGSDSCGLLTE---QEVNLARLPVEQARVPSLVPARESWHVRRERVISTVLESLACQSRAGVDGIPLAGAGGGGSGDVRNAQRPQVVGLVGESGSGKTATAAEIV------------------RSPEVLEYFSDGVVWLPVNEGDGSKARLPSLMHRLVGMVNEDIASRND---GIGDTCGEDTDICDSAEDSVAYVRGIVEGGGELRDGVRQQGRQLRCLVVADNVWEKEVVAKLRKTGMWVLLTSRKVEMIQEAGGHPVVIGRLVEADAVRVSRRAAELPSDEPSPLGAKDLAELCGRMALELSFVGRWNNVRGSKDPMAWQAAADNIRADLQRL 1557
++ +TL A+ + +AV++ E L AL + C ++TA I + +N+ PLE CV+ E + R +R L R E+ ++SRV LT D+GLAG+ ++ V D +L E Q A +PV A VP+ P SWHV R+RV+ V E L+C Q PQVVGLVG SGSGKT AA IV R V E+F DGVVWL V G GS R+P+LM +L V ED+ G T G A++ V G G GR+ RCLVVAD+VWE +++ +LR TGMWVL TSR ++++ G V + +L +A+A + R AAEL + P A + E C RMA L FVGRW+ V+GS D W A I A++ +
Sbjct: 85 AVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKW---------------RQTSSSEMNVAPLESCVNAAEDFIARCSRRG--LCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKV-----------------------DDLKAMLAEVIAQNTMPASVPV--AAVPNGKPVEHSWHVARDRVVDAVYEHLSC------------------------GQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGG-----------GSAFISDFVRGKGSAA------GRK-RCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAM 488
BLAST of mRNA_P-littoralis_Contig845.14.4 vs. uniprot
Match: A0A6H5KU40_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU40_9PHAE) HSP 1 Score: 156 bits (395), Expect = 7.890e-35 Identity = 127/419 (30.31%), Postives = 194/419 (46.30%), Query Frame = 1
Query: 346 RRLLNLGPLEECVDDLELLVKRLGKRRAPLLRRSNSIFKIKSEVEGIHSRVIDLTKDMGLAGVLAVFRGVLEGTGGEGGSHXXXXXXXXXXXGSDSCGL------LTEQEVNLAR--------LPVEQARVPSLVPARESW----HVRRERVISTVLESLACQSRAGVDGIPLAGAGGGGSGDVRNAQRPQVVGLVGESGSGKTATAAEIVRSPEVLEYFSDGVVWLPVNEGDGSKARLPSLMHRLVGMVNEDIASRNDGIGDTCGEDTDICDSAEDSVAYVRGIVEGGGELRDGVRQQGRQLRCLVVADNVWEKEVVAKLRKTGMWVLLTSRKVEMIQEAGGHPVVIGRLVEADAVRVSRRAAELPSDEPSPLGAKDLAELCGRMALELSFVGRWNNVRGSKDPMAWQAAADNIRADL 1548
R +++ PL ECVDDLE LV RR + N ++ +E + R+ +L M LA + V E GG + + C L L E N+ R LP QA + W HV R V++ V E +A P +V LVG SG+GKT+TA+E+ + E F DG+VW+ +G ARL M L V+ED+ ++ GI + + + + AY++ +E G GR L+CLVVAD+VWE EV+ LR++GM L+TSR E+ + +GG VV+ + E + + + ++AA+L S E P A+ + +LC +A+EL+FVGR + +R D W A + IR+++
Sbjct: 54 RNNIDVTPLSECVDDLEALVADYS-RRGLCSKFCNPDSEV---IEQLGKRIENLVHVMELAATVVVS----EQVGGVNAAVEDLRRQLEINWARNECLLAKHETMLEECTKNIERGIKSVLQQLPAPQAERDQAPEPKGVWKPEDHVIRRHVVARVCEYFD------------------------SANSPWMVALVGRSGAGKTSTASEMALHYHLRERFPDGIVWMRCGQGAADSARLARQMFILATWVHEDVENKL-GISPSAA----VAAAEGTAAAYIKTRMEQGNA--------GRGLKCLVVADDVWEPEVLDMLRQSGMKALITSRDYELTEASGGKAVVMDHVTEEEGMLILQKAAKLRSGESPPNEARKILDLCNYVAMELNFVGRLSMLRSQVDGTQWLRAWNEIRSEI 427 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig845.14.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig845.14.4 >prot_P-littoralis_Contig845.14.4 ID=prot_P-littoralis_Contig845.14.4|Name=mRNA_P-littoralis_Contig845.14.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1216bp MAMGSDSQEARQAIGRLAPDHSCAVISIHETLLAVTGKLDAVKTRKEELLback to top mRNA from alignment at P-littoralis_Contig845:59319..67076- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig845.14.4 ID=mRNA_P-littoralis_Contig845.14.4|Name=mRNA_P-littoralis_Contig845.14.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=7758bp|location=Sequence derived from alignment at P-littoralis_Contig845:59319..67076- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig845:59319..67076- >mRNA_P-littoralis_Contig845.14.4 ID=mRNA_P-littoralis_Contig845.14.4|Name=mRNA_P-littoralis_Contig845.14.4|organism=Pylaiella littoralis U1_48|type=CDS|length=3648bp|location=Sequence derived from alignment at P-littoralis_Contig845:59319..67076- (Pylaiella littoralis U1_48)back to top |