mRNA_P-littoralis_Contig843.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig843.3.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 474 bits (1219), Expect = 1.190e-165 Identity = 224/234 (95.73%), Postives = 227/234 (97.01%), Query Frame = 1
Query: 1 FHQFCEHFATEMYDEHIFLPSEENGGLDRVMGQYEKLGFTGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVHYAGRVLAVTEGFTGSTNDKTIICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEANFLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLD*VFSTCCILHNMLHTHDAMGGLEEDVNWVG 702
FHQFCEHFATEMYDEHIFLPSEENG LDRVMGQYEKLGF GAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTV++AGRVLAVTEGFTGSTNDKTIICCDEAVD IRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEA+ LFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLD VF TCCILHNMLHTHD MGGLEEDVNWVG
Sbjct: 159 FHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVG 392
BLAST of mRNA_P-littoralis_Contig843.3.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 369 bits (948), Expect = 1.970e-125 Identity = 171/233 (73.39%), Postives = 196/233 (84.12%), Query Frame = 1
Query: 1 FHQFCEHFATEMYDEHIFLPSEENGGLDRVMGQYEKLGFTGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVHYAGRVLAVTEGFTGSTNDKTIICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEANFLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLD*VFSTCCILHNMLHTHDAMGGLEEDVNWV 699
FH+FC+HFA EMYDEHI+LPSE+NG LD VM QY++LGF+GAMGS DVTHIGWS+CPYN RSYTGKEG PTVGYQVTV++AGR +AVTEGFT STNDKT +C D V+ IRTD QY EK F V+ +DGTT TLKGCYL+VDNGYHKW++L+EP+KYPLSE + LFSKRLESVRKDVECFFGILK FRI K+AM Y +QER+D VF TCCILHNMLHT D M L E+ WV
Sbjct: 130 FHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWV 362
BLAST of mRNA_P-littoralis_Contig843.3.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 357 bits (917), Expect = 3.520e-122 Identity = 168/222 (75.68%), Postives = 188/222 (84.68%), Query Frame = 1
Query: 34 MYDEHIFLPSEENGGLDRVMGQYEKLGFTGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVHYAGRVLAVTEGFTGSTNDKTIICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEANFLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLD*VFSTCCILHNMLHTHDAMGGLEEDVNWV 699
MYDEHI LP+EE+G LD V+ QY++LGFTGAMGS DVTHI WSRCPYNQ RSYTGKEG PT+GYQVTV +AGR +AVTEGFTGSTNDKT +C D AV+ IRTDKQY EK F V+ +DGTT TLKGCY++VDNGYHKW++LIEPSKYPLSE + LFSKRLESVRKDVECFFGILK R RIL LAM +Q QER+D VF TCCILHNMLHT D M L E+ NWV
Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWV 222
BLAST of mRNA_P-littoralis_Contig843.3.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 357 bits (916), Expect = 6.710e-120 Identity = 176/261 (67.43%), Postives = 195/261 (74.71%), Query Frame = 1
Query: 1 FHQFCEHFATEMYDEHIFLPSEENGGLDRVMGQYEKLGFTGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVHYAGRVLAVTEGFTGSTNDKTIICCDEAVDGIRTDKQYA----------------------------EKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEANFLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLD*VFSTCCILHNMLHTHDAMGGLEEDVNWV 699
FH+FC HFA EMYDE I LP+EE+G LD VM QY++LGFTGA+GS DVTHI WSRCPYNQ RSYTGKEG PT+ YQVTV +AGR +AVTEGFTGSTNDKTI+C D AV+ I TDK Y EK F V+ +DGTT TLKGCYL+VDNGYHKW++LIEPSKYPLSE + LFSKRLESVRKDVECFFGILK RFRILKLAM YQ QER+D VF TC ILHNMLHT D M L E+ NWV
Sbjct: 117 FHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWV 377
BLAST of mRNA_P-littoralis_Contig843.3.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 327 bits (837), Expect = 1.780e-109 Identity = 159/233 (68.24%), Postives = 178/233 (76.39%), Query Frame = 1
Query: 1 FHQFCEHFATEMYDEHIFLPSEENGGLDRVMGQYEKLGFTGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVHYAGRVLAVTEGFTGSTNDKTIICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEANFLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLD*VFSTCCILHNMLHTHDAMGGLEEDVNWV 699
FH+FC FA EMYDEHI LP+EE+G L VM QY++LG CPYNQ RSYTGK+ PT+ YQVTV +A R +AVTEGFTGSTNDKTI+C D AVD IRTDKQY EK F ++ +DGTT TLKGCY + DNGYHKW++LIEPSKYPLSE + LFSKRLESVRKDVECFFGILK RFRILKLAM YQ QER+D VF TCCILHNMLHT D M L E+ NWV
Sbjct: 52 FHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWV 267
BLAST of mRNA_P-littoralis_Contig843.3.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 321 bits (822), Expect = 4.300e-105 Identity = 156/235 (66.38%), Postives = 181/235 (77.02%), Query Frame = 1
Query: 1 FHQFCEHFATEMYDEHIFLPSEENGGLDRVMGQYEKLGFTGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVHYAGRVLAVTEGFTGSTNDKTIICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEANFLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLD*VFSTCCILHNMLHTHDAMGGLEEDVNWVGN 705
FH+F +FA EMY EHIFLP+ + +VM QY++LGF+GA GSTDVTHI W CPYNQ RSYTGKEG PTV YQVTV + RVLAVT GFTGSTNDK+II D AV IR D Y+EK FTV++ DGT LKGCYL+VDNGYHKW LI PSKYP+ + + FSKRLESVRKDVECFFGI+K RFRILKL++ Y KQE +D VF TCCILHNMLH++D +EE+ NW GN
Sbjct: 190 FHRFTRYFAREMYAEHIFLPTGDY--QKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGN 422
BLAST of mRNA_P-littoralis_Contig843.3.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 315 bits (806), Expect = 1.110e-103 Identity = 147/234 (62.82%), Postives = 182/234 (77.78%), Query Frame = 1
Query: 1 FHQFCEHFATEMYDEHIFLPSEENGGLDRVMGQYEKLGFTGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVHYAGRVLAVTEGFTGSTNDKTIICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEANFLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLD*VFSTCCILHNMLHTHDAMGGLEEDVNWVG 702
FH+FC++FA E+YDE+++LP+ E+ L +VM QY+++GF GA+GSTDVTHI W CPYNQ R YTGKEGKPTV +QVTV ++GRVLAVT GFTG+TNDKTII D+AV IRTD Y E+ + ++ +DG KGCYL+VDNGYHKWR LI PSK P+ + +FSKRLES RKDVEC+FGILK RFRI KLA+ + KQE +D VF TCCILHNMLH+ D G + E+ NW G
Sbjct: 115 FHRFCKYFAAELYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAG 346
BLAST of mRNA_P-littoralis_Contig843.3.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 315 bits (806), Expect = 1.730e-102 Identity = 147/234 (62.82%), Postives = 182/234 (77.78%), Query Frame = 1
Query: 1 FHQFCEHFATEMYDEHIFLPSEENGGLDRVMGQYEKLGFTGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVHYAGRVLAVTEGFTGSTNDKTIICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEANFLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLD*VFSTCCILHNMLHTHDAMGGLEEDVNWVG 702
FH+FC++FA E+YDE+++LP+ E+ L +VM QY+++GF GA+GSTDVTHI W CPYNQ R YTGKEGKPTV +QVTV ++GRVLAVT GFTG+TNDKTII D+AV IRTD Y E+ + ++ +DG KGCYL+VDNGYHKWR LI PSK P+ + +FSKRLES RKDVEC+FGILK RFRI KLA+ + KQE +D VF TCCILHNMLH+ D G + E+ NW G
Sbjct: 206 FHRFCKYFAAELYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAG 437
BLAST of mRNA_P-littoralis_Contig843.3.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 280 bits (716), Expect = 1.410e-90 Identity = 136/234 (58.12%), Postives = 165/234 (70.51%), Query Frame = 1
Query: 1 FHQFCEHFATEMYDEHIFLPSEENGGLDRVMGQYEKLGFTGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVHYAGRVLAVTEGFTGSTNDKTIICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEANFLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLD*VFSTCCILHNMLHTHDAMGGLEEDVNWVG 702
FH+FC HFA EM+DEHI+LP+ LD VMG + +LG+TGA GSTDVTHIGW+ CP+ GRS+TGKEG PT+ Y VTV + GR LAVT GFTG+TNDKTII D V+ IRT QY E+ + + K +GT +GC+LIVDNGYH+W LI PSKYP + FS+ LESVRKDV CF RILKL M Y K+E +D +F TCCILHNMLHT D + EE+ +W G
Sbjct: 68 FHKFCRHFAAEMFDEHIYLPTGTY--LDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTG 291
BLAST of mRNA_P-littoralis_Contig843.3.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE) HSP 1 Score: 270 bits (691), Expect = 1.050e-83 Identity = 138/243 (56.79%), Postives = 166/243 (68.31%), Query Frame = 1
Query: 4 HQFCEHFATEMYDEHIFLPSEENGGLDRVMGQYEKLGFTGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVHYAGRVLAVTEGFTGSTNDKTIICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNG----------YHK---------------WRMLIEPSKYPLSEANFLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLD*VFSTCCILHNMLHT 657
H+FC HFA EM+DEHI+L + LD VMG + +LG TGA GST+VTHIGW+ CP+ GRS+TGKEG PT+ +VTV +AGR LAVT GFTG+TNDKTII D V+ IRT+ QY E+ + + K +GT T +GC+LIVDNG +HK W LI PSKYP S + FS+ LESVRKDVECFFGILK RFRILKL M Y K+E +D +F TCCILHNMLHT
Sbjct: 246 HKFCRHFAAEMFDEHIYLLTGTY--LDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 486 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig843.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig843.3.1 >prot_P-littoralis_Contig843.3.1 ID=prot_P-littoralis_Contig843.3.1|Name=mRNA_P-littoralis_Contig843.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=194bp MYDEHIFLPSEENGGLDRVMGQYEKLGFTGAMGSTDVTHIGWSRCPYNQGback to top mRNA from alignment at P-littoralis_Contig843:45447..46352+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig843.3.1 ID=mRNA_P-littoralis_Contig843.3.1|Name=mRNA_P-littoralis_Contig843.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=906bp|location=Sequence derived from alignment at P-littoralis_Contig843:45447..46352+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig843:45447..46352+ >mRNA_P-littoralis_Contig843.3.1 ID=mRNA_P-littoralis_Contig843.3.1|Name=mRNA_P-littoralis_Contig843.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=582bp|location=Sequence derived from alignment at P-littoralis_Contig843:45447..46352+ (Pylaiella littoralis U1_48)back to top |