mRNA_P-littoralis_Contig843.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig843.2.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 130 bits (327), Expect = 1.440e-34 Identity = 60/63 (95.24%), Postives = 60/63 (95.24%), Query Frame = 1
Query: 1 AQVLEDEGLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFTTAQRDAYGRRCHPVEHKV 189
AQVLEDE LKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWF T QRDAYGRRCHPVEHKV
Sbjct: 66 AQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKV 128
BLAST of mRNA_P-littoralis_Contig843.2.1 vs. uniprot
Match: A0A6H5KLY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY4_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 2.980e-23 Identity = 44/62 (70.97%), Postives = 51/62 (82.26%), Query Frame = 1
Query: 1 AQVLEDEGLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFTTAQRDAYGRRCHPVEHK 186
AQ+LED+ L+D TSI AK+FR DFRVPY FFLRLV LVK K+WF+TA +DA GR HPVEHK
Sbjct: 97 AQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKSKNWFSTAGKDAIGRASHPVEHK 158
BLAST of mRNA_P-littoralis_Contig843.2.1 vs. uniprot
Match: A0A6H5KQX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX5_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 3.020e-22 Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 1
Query: 1 AQVLEDEGLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFTTAQRDAYGRRCHPVEHKV 189
AQ+LE++ L+D S A+K+FR DFRVPY FFLRLV LVK KDWFTT+ DA GR+ HPVEHKV
Sbjct: 64 AQMLENKDLEDSNSKASKQFRLDFRVPYSFFLRLVALVKSKDWFTTSGCDAAGRQSHPVEHKV 126
BLAST of mRNA_P-littoralis_Contig843.2.1 vs. uniprot
Match: A0A6H5K6R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6R1_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 7.250e-22 Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 1 AQVLEDEGLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFTTAQRDAYGRRCHPVEHKV 189
AQ+LED+ L+D +I +K+FR D RVPY FFLRLV LVK KDWF+T+ DA GR+ HPVEHKV
Sbjct: 32 AQMLEDKDLEDSNTITSKQFRLDLRVPYSFFLRLVALVKSKDWFSTSGCDAAGRQSHPVEHKV 94
BLAST of mRNA_P-littoralis_Contig843.2.1 vs. uniprot
Match: A0A6H5JSI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI1_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 9.330e-22 Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 1 AQVLEDEGLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFTTAQRDAYGRRCHPVEHK 186
AQ+LED+ L+D TSI AK+FR DFRVP+ FFLRLV LVK K+WF+TA DA GR HP EHK
Sbjct: 49 AQLLEDKDLEDSTSITAKQFRGDFRVPFTFFLRLVALVKSKNWFSTAVTDAVGRASHPGEHK 110
BLAST of mRNA_P-littoralis_Contig843.2.1 vs. uniprot
Match: A0A6H5KG98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG98_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 1.530e-21 Identity = 43/63 (68.25%), Postives = 49/63 (77.78%), Query Frame = 1
Query: 1 AQVLEDEGLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFTTAQRDAYGRRCHPVEHKV 189
AQ+LED+ L+D SI +K+FR DFRVPY FFLRLV LVK KDW TT+ DA GR HPVEHKV
Sbjct: 114 AQMLEDKDLEDSNSITSKQFRLDFRVPYSFFLRLVALVKSKDWSTTSGCDAAGRHSHPVEHKV 176
BLAST of mRNA_P-littoralis_Contig843.2.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 6.440e-21 Identity = 44/63 (69.84%), Postives = 49/63 (77.78%), Query Frame = 1
Query: 1 AQVLEDEGLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFTTAQRDAYGRRCHPVEHKV 189
AQ+LED+ L+D TSI AK+FR DFRVPY FFLRLV LVK K+WF A DA GR HPVEHKV
Sbjct: 111 AQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKSKNWFLAAATDAVGRASHPVEHKV 173
BLAST of mRNA_P-littoralis_Contig843.2.1 vs. uniprot
Match: A0A6H5L642_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L642_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 1.860e-19 Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 1 AQVLEDEGLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFTTAQRDAYGRRCHPVEHKV 189
AQ+LED+ L+D S +K+FR DFRVPY FFLRLV LVK K+WF TA D GR HPVEHKV
Sbjct: 64 AQMLEDKDLEDSNSRTSKQFRLDFRVPYSFFLRLVALVKSKNWFVTAGCDGAGRHSHPVEHKV 126
BLAST of mRNA_P-littoralis_Contig843.2.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 5.590e-19 Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 1 AQVLEDEGLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFTTAQRDAYGRRCHPVEHKV 189
AQ+LED+ L+D SI++K+FR DFRVP FFLRLV LVK KDWFTT+ DA R+ HPVEHKV
Sbjct: 37 AQMLEDKDLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKV 99
BLAST of mRNA_P-littoralis_Contig843.2.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 1.260e-17 Identity = 40/61 (65.57%), Postives = 46/61 (75.41%), Query Frame = 1
Query: 7 VLEDEGLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFTTAQRDAYGRRCHPVEHKV 189
+LED+ L+D TSI AK+ R DFRVPY FLRLV LVK K+WF+TA DA G HPVEHKV
Sbjct: 26 LLEDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKV 86 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig843.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig843.2.1 >prot_P-littoralis_Contig843.2.1 ID=prot_P-littoralis_Contig843.2.1|Name=mRNA_P-littoralis_Contig843.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=63bp AQVLEDEGLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFTTAQRDback to top mRNA from alignment at P-littoralis_Contig843:44154..44342+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig843.2.1 ID=mRNA_P-littoralis_Contig843.2.1|Name=mRNA_P-littoralis_Contig843.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=189bp|location=Sequence derived from alignment at P-littoralis_Contig843:44154..44342+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig843:44154..44342+ >mRNA_P-littoralis_Contig843.2.1 ID=mRNA_P-littoralis_Contig843.2.1|Name=mRNA_P-littoralis_Contig843.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=189bp|location=Sequence derived from alignment at P-littoralis_Contig843:44154..44342+ (Pylaiella littoralis U1_48)back to top |