prot_P-littoralis_Contig840.6.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig840.6.2
Unique Name	prot_P-littoralis_Contig840.6.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	422

Homology

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BLAST of mRNA_P-littoralis_Contig840.6.2 vs. uniprot
Match: A0A6H5J9N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N6_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 4.720e-52
Identity = 134/319 (42.01%), Postives = 173/319 (54.23%), Query Frame = 0

Query:  120 GKDEAGATLL-DNVNVRTGLWE-------------RQQATEALRIPASDVGADADARAGAGAAEEGHFQAVMKKCLPEERGGLISLRGQCSGGDDFTVSSGVVPSADGCYSAADGTDFGEGFFYTTDDADNKRSIYPKVITIGGESSYFWAASALVGFSNSDSIVIDCISVEPTSTHVHPAAASWSCDVDATGRLVNVTDEQFFLVCGCGTTATSGXXXXXXXXXXXXXXXXXXXXXXXS---------TTAPTATPGKVTA----TPA-SINPDTESEASGGSGLKAGPRGCSFLTASSGSAAAAVTLAAGVLCAALV 410
            G+D  G +LL D    R+  +E             R +  EA R P +D  ADAD         EG F   +   +  E  G++ LRGQCS GD FTV+S  +PS +GCY++  GT FGEGF Y+T+D+    +IYPK+IT  G S++FWA S L  FS  DS+ IDC+SVE TST++HPAAASW CDVD +G L+ V D++FFLVCGCGT+ATSG                                 + APT +P  + A    TPA S  PDT +E SGG+   AG      LTA+   AA  V+LA  V C A+V
Sbjct:   42 GRDARGTSLLLDTAEARSADFEHGYFPLDESKADLRGRRLEANR-PQADGSADADDA-------EGIFSPAV---MAAEGWGVVDLRGQCSDGDSFTVTSPSIPSTEGCYTSVPGTSFGEGFMYSTEDSTVTTTIYPKIITKDGTSNFFWAVSELAVFSG-DSVTIDCLSVETTSTYIHPAAASWQCDVDGSGELLPVEDDEFFLVCGCGTSATSGSSSDGADPVQTPTASPVSNPSSVDGDGDDSQDFSVAPTGSPTSMAAVVAPTPAGSSPPDTNTEVSGGNSRGAGSYAMQMLTAT---AAGVVSLATCV-CVAIV 344

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig840.6.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig840.6.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5J9N6_9PHAE	4.720e-52	42.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..375
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..371

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig840	contig	P-littoralis_Contig840:13890..18837 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig840.6.2	mRNA_P-littoralis_Contig840.6.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig840 11699..19497 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig840.6.2 ID=prot_P-littoralis_Contig840.6.2|Name=mRNA_P-littoralis_Contig840.6.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=422bp
MTPPPRPPPSASLPSSFSQPSTLPLKPAYSLAAATAGATATGAATAATAT
TATTTAPAREAAAAAAAATTTVTAREAAASAASAAAAMSTRRDTSGPEAE
PRPRALSQVEAEDTRGTRGGKDEAGATLLDNVNVRTGLWERQQATEALRI
PASDVGADADARAGAGAAEEGHFQAVMKKCLPEERGGLISLRGQCSGGDD
FTVSSGVVPSADGCYSAADGTDFGEGFFYTTDDADNKRSIYPKVITIGGE
SSYFWAASALVGFSNSDSIVIDCISVEPTSTHVHPAAASWSCDVDATGRL
VNVTDEQFFLVCGCGTTATSGSSSSSSSNNSSNNIAPSAGGAESSTTAPT
ATPGKVTATPASINPDTESEASGGSGLKAGPRGCSFLTASSGSAAAAVTL
AAGVLCAALVPDVVASLLFLL*