prot_P-littoralis_Contig84.116.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig84.116.4
Unique Nameprot_P-littoralis_Contig84.116.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length2380
Homology
BLAST of mRNA_P-littoralis_Contig84.116.4 vs. uniprot
Match: D8LGV1_ECTSI (FYVE, RhoGEF and PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV1_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 1.260e-68
Identity = 219/464 (47.20%), Postives = 255/464 (54.96%), Query Frame = 0
Query:    1 MSFEELQSVGSGDDRSRQSSLASLADDITKRSSLNHRLGLGGSGLDRALANLHSQ--------AASTAATDRND---QFLSTAAAVATGTASGFGSFRVPIQTEESK--KKLSSLAESAGDADAEDDADAWDQGASSFSAPVVSDAPMLQARVSMPDSVSDAEPDRRQWLKQQSRSXXXXXXXXXXXXXXXXXXXXXXXXFASYDDRPSSRDSXXXXXXXXXXXXXXXXXXNTSSRLSVASTPATSWRQRKINQQHQQLYRS-----------SERAAASEAGSPKNGSSLRPLRGSVSRRASVPSLPSTVTMTTTADRSR----QDSNSSALS--VSSSLLRWCGVCETEFTRLRRPHRCRQCMEAVCAQCSPARLPVPGSGSGELKRTCKLCA-QDSMAPQIDAVVSPQHRHRRRPQAAGADADGAAARVSRGAQRRSMSMGSIARAPFGVLSTVTAAVTAG 433
            MS EELQS+GSGDDRSR+SSLASLADD+TKRSS++HRLG G   LDRALA+LH +        AAS AA        QFLSTAAA A+G ASGFGSFRVPIQ E     +KLSSLAE AGDA  EDD     Q      A  VSDAP+LQARV +PDS S+ E DRRQWLKQQS+S                         +SYD   SS                     +TSSRLS+ STP  S R+ K  Q                      AA    G                      S  ST +M+    R R    + ++SS+LS  +S +LLRWC VCE EFT+LRRPHRCR+C+E VCA CSPARLPVPG+GS ELKRTCKLC   D+ A  +    +P     RRP A GA A   + RV+R  +RRS SMGS ARAP G+LS      TAG
Sbjct:    1 MSVEELQSIGSGDDRSRESSLASLADDLTKRSSVHHRLGFG---LDRALAHLHGKLDGDGVPTAASPAAAANESGGSQFLSTAAATASGAASGFGSFRVPIQKENDSADRKLSSLAEGAGDA--EDDRGQQGQPP----AAAVSDAPILQARVQIPDSASNTELDRRQWLKQQSKSRRRRQQRGSVSR-------------SSYDSEVSS---------LAGDDSDTSSVASTSSRLSIVSTPEISGRKWKTRQXXXXXXXXXXXXXXXXXXVGRPAATPVVGXXXXXXXXXXXXXXXXXXXXXRSSWSTASMSAVGTRPRGTLTRTNSSSSLSSELSMTLLRWCAVCEAEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCVGDDAAAAPLVGAAAPS----RRPNAVGAAA-APSPRVARITKRRSASMGSAARAPVGILSKPVYVDTAG 428          
BLAST of mRNA_P-littoralis_Contig84.116.4 vs. uniprot
Match: A0A6H5JBA2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA2_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 1.890e-29
Identity = 111/270 (41.11%), Postives = 140/270 (51.85%), Query Frame = 0
Query:  138 ARVSMPDSVSDAEPDRRQWLKQQSRSXXXXXXXXXXXXXXXXXXXXXXXXFASYDDRPSSRDSXXXXXXXXXXXXXXXXXXNTSSRLSVASTPATSWRQRKINQQHQQLY-------RSSERAAASEAGSPKNGSSLRPLRGSVSRRASVPSLPSTVTMTTTADRSR----QDSNSSALS--VSSSLLRWCGVCETEFTRLRRPHRCRQCMEAVCAQCSPARLPVPGSGSGELKRTCKLCAQD--SMAPQIDAVVSPQHRHRRRPQAAGA 392
            ARV +PDS S+ E DRRQWLKQQS+S                         +SYD   SS                     +TSSRLS+ STP  S R+ +  +Q             S   +    A +P  GS    + G  SRR+S     ST +M+    R R    + ++SS+LS  +S +LLRWC VCE EFT+LRRPHRCR+C+E VCA CSPARLPVPG+GS ELKRTCKLC  D  + AP++ A         RRP+A GA
Sbjct:    9 ARVQIPDSASNTELDRRQWLKQQSKSRRRRQQRGSVSR-------------SSYDSDASS---------LAGDDSDTCSVASTSSRLSIVSTPEISGRKWQTRKQXXXXXXXXXXXSNSLRSSLGRPAATPLVGSPGSSVSGGGSRRSSW----STASMSAVGTRPRGTLTRTNSSSSLSSELSMTLLRWCAVCEGEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCVGDDAAAAPRVGAATPS-----RRPKAVGA 247          
BLAST of mRNA_P-littoralis_Contig84.116.4 vs. uniprot
Match: A0A6H5JGB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGB5_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 3.830e-29
Identity = 93/153 (60.78%), Postives = 105/153 (68.63%), Query Frame = 0
Query:    1 MSFEELQSVGSGDDRSRQSSLASLADDITKRSSLNHRLGLGGSGLDRALANLHSQ---------AASTAATDRN--DQFLSTAAAVATGTASGFGSFRVPIQTEESK--KKLSSLAESAGDADAEDDADAWDQGASSFSAPVVSDAPMLQARV 140
            MS EELQS+GSGDDRSRQSSLASLADD+TKRSS+ HRLG G   LDRALA+LH +         A+ TAA + +   QFLSTAAA A+G ASGFGSFRVP Q E     +KLSSLAE AGDA  EDD     Q     +A  VSDAP+LQ  V
Sbjct:    1 MSVEELQSIGSGDDRSRQSSLASLADDLTKRSSVGHRLGFG---LDRALAHLHGKLDGDGVPTAASPTAAGNESGGSQFLSTAAATASGAASGFGSFRVPFQKENDSADRKLSSLAEGAGDA--EDD---HRQQGQPLAAAAVSDAPILQVGV 145          
BLAST of mRNA_P-littoralis_Contig84.116.4 vs. uniprot
Match: A0A6H5JMZ6_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ6_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 2.560e-27
Identity = 101/246 (41.06%), Postives = 124/246 (50.41%), Query Frame = 0
Query:  131 SDAPMLQARVSMPDSVSDAEPDRRQWLKQQSRSXXXXXXXXXXXXXXXXXXXXXXXXF----------ASYDDRPSSRDSXXXXXXXXXXXXXXXXXXNTSSRLSVASTPATSWRQRKINQQ-HQQLYRSSERAAASEAGSPKNGSSLRPLRGSVSRRASVPSLPSTVTMTTTADRSRQDSNSSALSVSSSLLRWCGVCETEFTRLRRPHRCRQCMEAVCAQCSPARLPVPGSGSGELKRTCKLCA 365
            SDAP+LQARV +P+S +D    RR+WLKQ S+S                                   + + +R +SRDS                  + +SRLS  STP  S RQRK+ QQ HQQ+        AS AGSP      R   GS++R +S  S   T  +++    S+Q                CGVCE EFTRLRRPHRCR+CMEAVCA CSP RLPVPGSGS E KRTC+LCA
Sbjct:   35 SDAPLLQARVRIPESATD----RREWLKQHSQSRRRQQPSPGSGLKTPHDGRRRPSSRFRPHAHAASNSEFRERTTSRDSSVAGGESDTS--------SVNSRLSTVSTPEISQRQRKMLQQRHQQVV-----GPASVAGSPDRTRRSRVPHGSITRSSSSAS---TSVVSSAPSLSQQS---------------CGVCEAEFTRLRRPHRCRRCMEAVCASCSPLRLPVPGSGSLEPKRTCRLCA 245          
BLAST of mRNA_P-littoralis_Contig84.116.4 vs. uniprot
Match: D8LNU4_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNU4_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.950e-18
Identity = 64/127 (50.39%), Postives = 73/127 (57.48%), Query Frame = 0
Query:  239 INQQHQQLYRSSERAAASEAGSPKNGSSLRPLRGSVSRRASVPSLPSTVTMTTTADRSRQDSNSSALSVSSSLLRWCGVCETEFTRLRRPHRCRQCMEAVCAQCSPARLPVPGSGSGELKRTCKLCA 365
            + Q+HQQ+        AS AGSP      R   GS++R +S                    S S A S  S   + CGVCE EFTRLRRPHRCR+CMEAVCA CSP RLPVPGSGS E KRTC+LCA
Sbjct:    2 LQQRHQQVV-----GPASVAGSPDRTRRSRVPHGSITRSSS------------------SASTSVASSAPSLSQQSCGVCEAEFTRLRRPHRCRRCMEAVCASCSPLRLPVPGSGSLEPKRTCRLCA 105          
BLAST of mRNA_P-littoralis_Contig84.116.4 vs. uniprot
Match: D7FJP7_ECTSI (Rho guanine nucleotide exchange factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP7_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.290e-12
Identity = 43/71 (60.56%), Postives = 47/71 (66.20%), Query Frame = 0
Query:  309 SSLLRWCGVCETEFTRLRRPHRCRQCMEAVCAQCSPARLPVPGSGSGELKRTCKLCAQDSMAPQIDAVVSP 379
            SS  + CGVC  EFTR RRPHRCR C +AVCA CSPARLP         KRTCK CA DS  P++  VVSP
Sbjct:  144 SSAQQQCGVCRAEFTRYRRPHRCRACGKAVCATCSPARLP---------KRTCKPCAGDSAIPRVFPVVSP 205          
BLAST of mRNA_P-littoralis_Contig84.116.4 vs. uniprot
Match: A0A6H5KYW1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW1_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.730e-12
Identity = 40/65 (61.54%), Postives = 44/65 (67.69%), Query Frame = 0
Query:  315 CGVCETEFTRLRRPHRCRQCMEAVCAQCSPARLPVPGSGSGELKRTCKLCAQDSMAPQIDAVVSP 379
            CGVC  EFTR RRPHRCR C + VCA CSPARLP         KRTCK CA DS  P++ +VVSP
Sbjct:  173 CGVCRAEFTRYRRPHRCRACSKVVCATCSPARLP---------KRTCKPCAGDSAIPRVFSVVSP 228          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig84.116.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LGV1_ECTSI1.260e-6847.20FYVE, RhoGEF and PH domain-containing protein n=1 ... [more]
A0A6H5JBA2_9PHAE1.890e-2941.11FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JGB5_9PHAE3.830e-2960.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMZ6_9PHAE2.560e-2741.06FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LNU4_ECTSI1.950e-1850.39FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FJP7_ECTSI1.290e-1260.56Rho guanine nucleotide exchange factor n=1 Tax=Ect... [more]
A0A6H5KYW1_9PHAE1.730e-1261.54FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 301..370
e-value: 3.9E-4
score: 24.1
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 313..367
e-value: 1.0E-8
score: 35.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 293..371
e-value: 7.3E-12
score: 46.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1727..1752
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1033..1047
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1380..1545
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1614..1828
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 998..1013
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1332..1360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1695..1709
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 667..685
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1332..1356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1291..1317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 592..606
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2265..2357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..524
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1887..1919
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2131..2145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1978..1999
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 539..1129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2333..2347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1958..2253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1529..1543
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1158..1317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1226..1245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 2283..2320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1384..1408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 939..966
NoneNo IPR availableCDDcd00065FYVE_like_SFcoord: 315..365
e-value: 2.25893E-15
score: 70.2536
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 315..369
score: 10.029735
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 308..367

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig84contigP-littoralis_Contig84:584384..603488 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig84.116.4mRNA_P-littoralis_Contig84.116.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig84 583876..603909 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig84.116.4 ID=prot_P-littoralis_Contig84.116.4|Name=mRNA_P-littoralis_Contig84.116.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2380bp
MSFEELQSVGSGDDRSRQSSLASLADDITKRSSLNHRLGLGGSGLDRALA
NLHSQAASTAATDRNDQFLSTAAAVATGTASGFGSFRVPIQTEESKKKLS
SLAESAGDADAEDDADAWDQGASSFSAPVVSDAPMLQARVSMPDSVSDAE
PDRRQWLKQQSRSRRRSGGGGGGSGRHSSSSSRSRSAFASYDDRPSSRDS
SLAGGDDDDWDAASATSSNTSSRLSVASTPATSWRQRKINQQHQQLYRSS
ERAAASEAGSPKNGSSLRPLRGSVSRRASVPSLPSTVTMTTTADRSRQDS
NSSALSVSSSLLRWCGVCETEFTRLRRPHRCRQCMEAVCAQCSPARLPVP
GSGSGELKRTCKLCAQDSMAPQIDAVVSPQHRHRRRPQAAGADADGAAAR
VSRGAQRRSMSMGSIARAPFGVLSTVTAAVTAGTAGLLFPAGSAVDSDAD
AADDDAAASSGKAGAGGGSDGKKDGGGNDGGGGSNEAAVGLSTGGPAMAA
GGDDPEAEGGEDAEGMAPRPGVVLEKNNRYVAPVVARRAENEEKLEGNGG
GPDEATGARAERPSAEGEGEGSSVVAELDTSVAAAAGSLVGMEREEKTKT
QRRETEESPPAAAATVTASPAGVSKLADVDWKQQREAPTAEVSSPPAYHL
LQRDASTEEVDERQAPATVTARSSPPVTSFSQDGPGAMGTEPREEEKGEQ
EEEEEGGEEKSVEASGGDKDAGAGPNSNAAAMAGHSWGATGDLPAAAVVA
RNGDGSVAAPDRNGNAPLTVPVAVADTVADQVAPDDDDTESVRPVAAATA
TATKQVEQPFAIADAQGESATETSGGSIPEEEPRDTSVPAASAPDVDGPS
VDTSPAVDAADMPLRTASASDGEVDVPPSVDLTRVTPTLPAVEGDLFSER
EPSPGGMTVATAPGVSVEEDVADASPLAAGGLAADAKASLVGTSSSVPDA
PPGDGTTASATVSSEDASGAAAPPPVDGGDLPPADVPGGETVDLKRQPEV
PPTSSSDISVSMPDLPPASSAAAAAAAAAASTGVSFSADTTEAPPTSGVP
TVPAVDIVDVQQSSVVDADAPGLSPSLVAEAGGAGDDMSGGAGADTPPRP
GDDDSDTGTKVPDETRVYGGGDVDTPSLTAGSAAAGGMAAAATTATTTTT
AVPLDGGAIVGTGSIGVSGEEPDAEEVPSVDASSSSLFAPGVPSPEVEEA
TKPKKSRFGLKVPSLFKKGKSSKQASDTDAPDTPSFSSDNNAAAGIPPTA
SFVKDTLPPSEKDVDTPVPLPPLVDDRLSTAAGARAEGVGMDDDIAAKDP
LADTEPAEPTEAKKKAKKGLFGGISFKRLSSSSSSLSSSKGKMMTENASS
GGTPVSAVSADGALIQPVLAAAAAAAGKDVTTEASASVPLQTHDDGPANN
SAEGVSTLRSGSEEAPPIASTEHAVVVGPAAASSQKKKEDEDVTAPAIDV
REAAAADAAADAAAGATADAAAGATAGELVPTSTEAAAAAAGVSRGEELS
SATGADAAGEQEESTDVSRTAAAEEEGGGNSTAPSTATQPDEQPVVDTCA
GDVSAAAAAAAEAAAEAAAAAEIAVEIAVPGVAVVAADPTEPATASSIEE
SVVDIGQHASGLDAIDGDEAVHRAAPVQQGSGTALLTGLEERPPSLELGE
EASGSAPSQALPSAPEASLAAVSASASPTGSGDDAVGASVEAEASPSVPT
PSAEVTRSDEPVFSDNVVPTEPVVEGGDKEQPTDSREEEVIRTDEAKDHP
VAHEMSASGASGSVVTLSQEDVSPPPPAAALEIIEPLSLSPSSTDGLPPP
VIVAPSAVAEGEDGGGGPPKAATNSSVVDASVGTPASVTTAATTAVRPAS
NSVPEPFSTVVGGTLHEVQQDSVDETVVTQPTVRRVDDVRASAGVPETAA
SEDGPDEAGGASAAADQLDAGAEHAVAETGAALLTTSEQNELAMPMLVPM
PTISAREGAAAVESATDTAAAPIDVEKSFAQDEGETGEQQARLEEGAGDS
DYRSCPSSSEYELGDDDEDGHGDRDGSGVLLNVPAVGVDAPAGGDSSSEV
TAAAADADVVVPHDDSLLLPAASMDDDEGAVLPPPLETTPSATENDVGIA
GLPIPNEEPLAENEEAAVAAAVAAGLETSGLSPVHSPNNDEPEMTGSPVA
ASPMKSRADDEVGQEMGVEATDDSLLGEEEKEEASPAGIPASGSGEARRA
EEVGSELESGKNSAFDSRSGYPTEESMAVPAAAAGVAPADDHETAGGFPT
EESMPVRMPVVAAALFGKGQGKAVGRSGGAGGGGGRSSSSSSSSSRRRRE
TAPQTLVSVPSSSSSTGRRGQPAAAARAAAATSGRSANASAREGSAGSAQ
QGGGKDWLDELIDMFADKCNTWCIEDDAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD