mRNA_P-littoralis_Contig84.78.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig84.78.1 vs. uniprot
Match: D7FXZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ3_ECTSI) HSP 1 Score: 941 bits (2433), Expect = 0.000e+0 Identity = 535/1155 (46.32%), Postives = 698/1155 (60.43%), Query Frame = 3
Query: 402 PLLPALASSS-RAPLG---NLDPNIQTRTIGD---------LTPMQRSRLNKKAV---------TAVEDVCRKSACTLK-----VPMKDLTTEVFKSMLSHPICRDRVRKTCDEAVRRSSSGAIQKGIASVWGRLSASRIVGSKRALPLRRAICAAVAGPEVSFAAAKDFLGGVLKRGTFNSGKKRHKVFMDESTGSPELLHD---KRKKRKDCFEESIPLALGHIAKSIIRRTQPSPCAVKTKHDHSEGNHYRSDVDNSIICNFPDRCQTEGVRYMMGTRKDLYYGCMDDLSAAFMATPRLVEVGVISSASFEKLIPFFVVEQSERSCLCVHCYRAKLSAMALRTHWPTLHQGDTPGSPCKCPCDLCTSDGGCGKFLPYAAPNEVFSMGSFSDKLLCKKELLYHSEESGGRVEAHKAACISRKCFKCKHKQNLLFGCPKNRGDRNRHL--LHSPVE-GSRGPGELRWDMFTTVDDGVALTDV-------------GDEDGDYDPRGGQDTRRKRKAVISQLGSVDDFFKELEEILALYIPHRRQYQIQRSAFDELRATLRPGHVLLVVDFQERLSVKDQDEVQSQHWDNQSTTIFPCVVYFVWDSRVWAYSFQVLSDDMAQDNAWVQHVMSMLLDDKIPALLRKIGADPMTNATIFTDNCAKQFKCKYHSGWVADSGVNARDKMGVPTGRSVHVEHHYFGACHGKNVSDSEGGVTKTWTRANVRNMSWRVSSADDLCKKLQKDLSFLLTNATDEERTS-WEINPLHQLKSGQLLMRKV-IGGKTRSQYNGTCPVKKESNTLLGRDYIFVKASDVTQAKRDGARSEAKAIPVQGCQMISRTAATKTPGVLATYTLSCRCDACRCNQPERCPLFLKGITAAPLEWSRRIRSTDQAGSAREELLEEMYSRISAALPYGSICVLRVDPEDYGGRDIVPVFIGRKAPSPWSREFAADGMFSHGDTMVWIHDMELVDPSGTDEEVEFLIPETLSEDQMRAVPLASFAGVGLGLEHYMEI--VSHQSASTQRYRMKEGMTKVARSTAVLISTNPGSVFPEVDPAASARVQTATLSKEDKLRAPLKKNLFATGTLVRQGFEAPKIGSTRR-WRGKKKFYAEVVDIAT-YYDRRHRYQLKWQGSREELLLAGVPDDVDEGYVE 3710
P +PA +++S R PLG + PN R LTP SR K V +++D C L V ++D T + + + + + + R + AI+ I ++W RLS+S V S RR + A+ GP ++ +F+GG L FN + R ++T + +LHD RK R D E S P AL I + II TQPSPC VKT+HD+ GNH RS+ DNS++C +P RC+TE VRY+MGT+ LY M DL AF A VEV IS SF+K+IPF+VVEQS RSC+CVHCY+AKL L WPTLHQG TPGS C C C+LC DGGC ++LPY + V SM FSD L+C KE LY SE+ G +AHKA C+S C CK KQ F CPKN+G+ +R L P + G+ PGE+RW FTTVDD T G++D D+DP GG RR R+AV + G+VD+F EL++ A + HRR Y+ QR+AF E + T+ G VL +VDFQERL V +QDEVQSQHWD ++TTIFPC ++F D RVWAYSFQ+LSDDMAQDNAWVQ VMS LL++ IPALLRKIGA PMT TI+TDNCAKQFKC++H GWVAD+ + DK G PTG VH+EHHYFGACHGKNVSD+EGG+TK + R + NM WRV+S+ DLC+KL+K L+F L A EE + W+ + + QLL+ K IG + T + K NT++GR YIF+ ASDV+ R ARS AK I V GCQ IS TAAT TPGVL T SC C CR ++PE CPL KGI + P E+SRR SA+E+ LEE+ + + LP+GSI +LRVD ++ G+DIVPV + RKA PW+ A DGMF HGDT+VW+ D+ G +EVE+L+P ++S + RAVPLA AG+G G+ YME S S S++ + ++EG+ + ARST VL+S NP + F P LS ED+ RAP++ +F GT++ Q F+ P+ + R W+ KK A V+ T RRH+Y+L+W G L+LA V + VDEG+VE
Sbjct: 20 PEVPAPSTASARQPLGLLSEISPNTDRRATPRHSSAAKKLRLTPQDASRSRMKKVLDHNVSVFVNSLQDACAAWTERLNKNFEPVAVEDATVDALLANKDLTAFMEDLASSSRKHKERGNE-AIRDNIRALWKRLSSSETVASSEGWQFRRVLLGALCGPNTTYKEVHEFVGGSLSHRAFNEAQIRR-----DATDTTSILHDLISDRKLRSDRLEVSCPKALAWIVERIIFHTQPSPCLVKTEHDYDTGNHRRSEADNSLVCVYPARCKTESVRYLMGTKLQLYQTVMKDLDQAFAAEK--VEVPSISRPSFDKIIPFYVVEQSLRSCICVHCYKAKLVTKGLCDLWPTLHQGSTPGSKCDCECELC-KDGGCAEYLPYGSSKAVHSMADFSDMLMCPKEQLYCSED-GTLEDAHKAVCVSGHCLLCKQKQERFFDCPKNKGNADRQLNPAAGPAQVGAPPPGEVRWKNFTTVDDNGQATSAPLQRRRAPNSTAGGEDDEDFDPLGGS-KRRTRRAVAEKTGTVDEFMAELKDHRASFGKHRRSYKTQRAAFTEKKLTIEEGEVLCIVDFQERLQVGEQDEVQSQHWDREATTIFPCPIFFKVDGRVWAYSFQILSDDMAQDNAWVQFVMSKLLNEDIPALLRKIGAKPMTRCTIWTDNCAKQFKCRFHFGWVADAQIMGLDKDGEPTGIRVHMEHHYFGACHGKNVSDAEGGMTKEYVRRMILNMMWRVASSRDLCEKLEKALNFFLRFANGEETEAFWKDRNGREGGTEQLLVTKTWIGEDSDQTQETTFLLTKNPNTMMGRRYIFIGASDVSSDVRKAARSSAKEIEVSGCQTISMTAATDTPGVLLTNQFSCYCAVCRDSKPENCPLIRKGIMSGPQEFSRRANRNTDIVSAKEDDLEELSGWMPSQLPFGSIALLRVDTSEHDGQDIVPVVVARKAACPWTPRVAVDGMFDHGDTIVWVVDLPQAIVRG--KEVEYLVPRSISGVKFRAVPLACIAGLGQGVLGYMEHPQCSQSSLSSETFVLREGVVENARSTVVLLSRNPLAAFESFQP--------VPLSVEDETRAPVEPRMFVNGTVIEQLFKGPRNSNGRPIWKHGKKLRAIVIACQTDIKSRRHQYKLQWSGELMILVLAEVEEFVDEGHVE 1153
BLAST of mRNA_P-littoralis_Contig84.78.1 vs. uniprot
Match: D7G3S2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S2_ECTSI) HSP 1 Score: 694 bits (1792), Expect = 2.550e-229 Identity = 358/736 (48.64%), Postives = 461/736 (62.64%), Query Frame = 3
Query: 702 IASVWGRLSASRIVGSKRALPLRRAICAAVAGPEVSFAAAKDFLGGVLKRGTFNSGKKRHKVFMDESTGSPELLHDKRKKRKDCFEESIPLALGHIAKSIIRRTQPSPCAVKTKHDHSE-GNHYRSDVDNSIICNFPDRCQTEGVRYMMGTRKDLYYGCMDDLSAAFMATPRLVEVGVISSASFEKLIPFFVVEQSERSCLCVHCYRAKLSAMALRTHWPTLHQGDTPGSPCKCPCDLCTSDGGCGKFLPYAAPNEVFSMGSFSDKLLCKKELLYHSEESGGRVEAHKAACISRKCFKCKHKQNLLFGCPKNRGDRNRHL---------LHSPVEGSRGPGELRWDMFTTVDDGVALTDV---------GDEDGDYDPRGGQDTRRKRKAVISQLGSVDDFFKELEEILALYIPHRRQYQIQRSAFDELRATLRPGHVLLVVDFQERLSVKDQDEVQSQHWDNQSTTIFPCVVYFVWDSRVWAYSFQVLSDDMAQDNAWVQHVMSMLLDDKIPALLRKIGADPMTNATIFTDNCAKQFKCKYHSGWVADSGVNARDKMGVPTGRSVHVEHHYFGACHGKNVSDSEGGVTKTWTRANVRNMSWRVSSADDLCKKLQKDLSFLLTNATDEERTSWEINPLHQLKSGQLLMRKVIGGKTRSQYNGTCPVKKESNTLLGRDYIFVKASDVTQAKRDGARSEAKAIPVQGCQMISRTAATKTPGVLATYTLSCRCDACRCN 2852
I W +++ +V ++ RR I A+AG +V + A +FLGG L R +FN K+R +++ G L KRK R D +E P+A + +SI+ RTQPSP KT HD+ + G+H RSD DNS++C P++C+T V YM GT++ LY+ CMDDL AF A E+ IS +SF+K++PF+VVEQS RSCLCVHCY+AKL +AL WPTLH GD GS C C C C SDG C FLP+A V MG SD LLC+K +Y + +G V+AH++ C+S C C+ KQ FGCP+++G +R S +EG PG ++W MFT+VD TD D+DGD++PR DT R +KAV ++ G+VDDF KE ++I YIPHRRQY QRSAF E TL G V+ V DFQE+L + +QDEVQ+QHW ++S TIFPC +YF W RVW+YSFQVLSDD QD+AWVQHVM +L + +PAL+RK+GA M A FTDNCAKQFKC++H GW+A V D G T VH+EHHYFG+CHGK+ SDSEG TK TR N+ N SW V S LC L + + F+L T++E ++E QLLM KV GG++RS T + K+ NTLLGR YIF A ++ A R RSEAKAI VQGCQ IS+T AT+TPGVLATYTLSC D C
Sbjct: 4 IRETWAKINQPHVVAAEAGYNARRTILGAIAGEKVKYKHANEFLGGTLSRKSFNEAKERRLTALED--GDVSALAGKRKMRSDNLQEKYPMACCRVEQSILERTQPSPNLTKTNHDYRQRGDHIRSDADNSLVCVHPEKCETHRVHYMTGTQQHLYHQCMDDLQVAFSAGR--AEIASISRSSFDKMVPFYVVEQSIRSCLCVHCYKAKLITVALYQLWPTLHHGDNSGSGCTCNCGFC-SDGACRTFLPFATEKSVHGMGDLSDLLLCEKVFIYRGQ-NGKDVKAHRSVCVSGHCPTCQRKQAAFFGCPRHQGTTDRRFPSSAATLGACPSAMEGQ--PGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVATKTGTVDDFTKEFKDIFRRYIPHRRQYHNQRSAFHETLRTLEEGTVVFVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDHAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVCDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGANTKGVTRHNIINQSWVVQSPRHLCTLLGESMDFMLLEPTEDEAMTFETARTSSRGGDQLLMTKVWGGESRSDERKTLLITKKPNTLLGRKYIFQAAGAISGAVRSACRSEAKAIKVQGCQAISKTVATETPGVLATYTLSCSHDPLSCR 731
BLAST of mRNA_P-littoralis_Contig84.78.1 vs. uniprot
Match: D7FWS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS2_ECTSI) HSP 1 Score: 641 bits (1653), Expect = 9.720e-208 Identity = 342/779 (43.90%), Postives = 456/779 (58.54%), Query Frame = 3
Query: 420 ASSSRAPLGNLD---------PNIQTRTIGDLTPMQRSRLNKKAVTAVEDVCRKSACTLKVPMKDLTTEVFKSMLSHPICRDRVRKTCDEAVRRSSSGAIQKGIASVWGRLSASRIVGSKRALPLRRAICAAVAGPEVSFAAAKDFLGGVLKRGTFNSGKKRHKVFMDESTGSPELLHDKRKKRKDCFEESIPLALGHIAKSIIRRTQPSPCAVKTKHDHSEGNHYRSDVDNSIICNFPDRCQTEGVRYMMGTRKDLYYGCMDDLSAAFMATPRLVEVGVISSASFEKLIPFFVVEQSERSCLCVHCYRAKLSAMALRTHWPTLHQGDTPGSPCKCPCDLCTSDGGCGKFLPYAAPNEVFSMGSFSDKLLCKKELLYHSEESGGRVEAHKAACISRKCFKCKHKQNLLFGCPKNRGDRNRHLLHSPVE-------GSRGPGELRWDMFTTVDD-GVAL-------TDVGDEDGDYDPRGGQDTRRKRKAVISQLGSVDDFFKELEEILALYIPHRRQYQIQRSAFDELRATLRPGHVLLVVDFQERLSVKDQDEVQSQHWDNQSTTIFPCVVYFVWDSRVWAYSFQVLSDDMAQDNAWVQHVMSMLLDDKIPALLRKIGADPMTNATIFTDNCAKQFKCKYHSGWVADSGVNARDKMGVPTGRSVHVEHHYFGACHGKNVSDSEGGVTKTWTRANVRNMSWRVSSADDLCKKLQKDLSFLLTNATDEERTSWEINPLHQLKSGQLLMRKVIG------GKTRSQYNGTCPVKKESNTLL 2666
A+S PLG LD P + + ++ R K ++ R A T + + + +K +++H ICR V C +++ A+ + + VW +S S +V S LRR + + P VSF AAK FLGG LK T+ ++R + + + + KRK+R D E+ P A+ + +SI RTQPSPC KTKHD ++GNH RSD DNS++C P+ CQT G+ YMMGT+ LY CM+DL AAF VEVG IS SFE +IPF+VVEQS RSCLCVHCY+AKL+ ++L WPTLH G+T G+ C C CDLC+S GGC +FLPY++P EV SMG SDKL+C K LY + +G + AH + C+S C +CK +Q+ FGCP+NRG +R L + G G + W MF TVD+ G A+ + G + +K V+ + G+VD+FF+E+ EI +Y HRRQ+ QRS F+E ATL G V+ VVDFQE+L + +QDEVQSQHW ++S TIFP +YF RVW YSFQVL+DD QDN WVQ+VM+ LL +P LLRK+GA PMT A IFTDNCAKQFKC++H GWVA SGV RD G T + VEHHYFG+CHGK+ SDSEG +TK R NV N SW V + + LC+ L K+ SFLL A+ +E + + H QLL+ KV GK R P+ + +TL+
Sbjct: 33 ATSPPTPLGRLDINTPPQPADPQQAAKRRKNTESTRKCRFVKAIKENIDSSARSHADTFGMSFEQAQKDAYKGVMTHEICRQVVHDECK--AKKNEHHAVVQAVRDVWSIVSGSSVVASAGGYSLRRTMVGIIGSPRVSFEAAKSFLGGTLKEKTYKKARERREEALKNNDFGK--MAGKRKQRSDNLEDLYPFAMARVRESIEERTQPSPCETKTKHDRAKGNHIRSDADNSLVCVRPELCQTHGISYMMGTQLQLYNSCMEDLQAAFEQGH--VEVGSISKKSFEDIIPFYVVEQSPRSCLCVHCYKAKLATVSLVKMWPTLHHGETTGAACSCTCDLCSSAGGCKEFLPYSSPKEVSSMGKLSDKLMCDKIFLYTATGNGKAISAHSSVCVSGNCPRCKERQDRFFGCPRNRGGIDRDLGPASTSSSTIHPAGRTSGGTVEWSMFDTVDEAGRAVGPSRRRGANAGGDXXXXXXXXXXXXXXPKKGVVVKRGTVDEFFEEVREIQGVYRKHRRQFHHQRSTFNETLATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKMRGRVWCYSFQVLTDDRTQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGAITKLAERTNVMNGSWVVRNPEHLCELLAKEFSFLLQEASPDEADRFYEDKSHSRGGQQLLVTKVCDHQLPPTGKDR-------PIPDDRSTLV 798
BLAST of mRNA_P-littoralis_Contig84.78.1 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE) HSP 1 Score: 607 bits (1566), Expect = 3.690e-186 Identity = 373/954 (39.10%), Postives = 499/954 (52.31%), Query Frame = 3
Query: 501 RSRLNKKAVTAVEDVCRKSACTLKVPMKDLTTEVFKSMLSHPICRDRVRKTCDEAVRRSSSGAIQKGIASVWGRLSASRIVGSKRALPLRRAICAAVAGPEVSFAAAKDFLGGVLKRGTFNSGKKRHKVFMDESTGSPELLHDKRKKRKDCFEESIPLALGHIAKSIIRRTQPSPCAVKTKHDHSE-GNHYRSDVDNSIICNFPDRCQTEGVRYMMGTRKDLYYGCMDDLSAAFMATPRLVEVGVISSASFEKLIPFFVVEQSERSCLCVHCYRAKLSAMALRTHWPTLHQGDTPGSPCKCPCDLCTSDGGCGKFLPYAAPNEVFSMGSFSDKLLCKKELLYHSEESGGRVEAHKAACISRKCFKCKHKQNLLFGCPKNRGDRNRHLLHSPVEGSRGPGELRWDMFTTVDDGVALTDVGDEDGDYDPRGGQDTRRKRKAVISQLGSVDDFFKELEEILALYIPHRRQYQIQRSAFDEL----RATLRPGHVLLVVDFQERLSVKDQDEVQSQHWDNQSTTIFPCVVYFVWDSRVWAYSFQVLSDDMAQDNAWVQHVMSMLLDDKIPALLRKIGADPMTNATIFTDNCAKQFKCKYHSGWVADSGVNARDKMGVPTGRSVHVEHHYFGACHGKNVSDSEGGVTKTWTRANVRNMSWRVSSADDLCKKLQKDLSFLLTNATDEERTSWEINPLHQLKSGQLLMRKV--------IGGKTRSQYNGTCPVKKESNTLLGRDYIFVKASDVTQAKRDGARSEAKAIPVQGCQMISRTAATKTPGVLATYTLSCRCDACRCNQPERCPLFLKGITAAPLEWSRRIRSTDQAGSAREELLEEMYSRISAALPYGSICVLRVDPEDYGGRDIVPVFIGRKAPSPWSREFAADGMFSHGDTMVWIHDMELVDPSGTDEEVEFLIPETLSEDQMRAVPLASFAGVGLGLEHYMEIVSHQSAST 3323
++ +NK+ + C+K+A P+ D T KS++SH R+ + + ++ I +W ++ +V + RR I A+A +V ++ A +F+GG L R TFN K R + + + G L KRK+R D +E P+A + +SI RTQPSP KT HD+ G+H RSD DNS++C ++ + G EVG IS SF+K++PF+VVEQS RSCLCVH YRAKL +AL W TLH GDT S C C C C SDG C FLP+A V MG SD LLC+K + H+ S G K +++ DR R S G+ + +G A D+DGD+ PR D+ R +K IS S ++ + D L T H + V DFQE+L + +QDEVQSQHW ++ TIFPC ++ W R DNAWVQHVM ++ + +PAL+RK+GA M A FTDNCAKQFKC++H GW+A V RD G T VHVEHHYFG+CHG + SDSEG TK+ TR N+ N +W V L L + + F+L T+EE +E + QLL+ K +GG+ + Q +E NTLLGR YIF A D+ A R +RSE+KAI V+GCQ+IS+ AT+TPGV+ATYTLSC + E+C LF +GI AP EWSRR RS D + +E +E M++R+ LPYGS+ ++RV PE+Y G DIVP+FIGRKAPS ++ FA DGMFS GD MVWIHD+ G VE+ +P L D+ RAVPLAS AG+G GLE YME VS S +T
Sbjct: 44 KNNVNKRVDKVLRIECKKAARACGKPVNDFITLASKSVVSH--FGGRLIEQHPSPSSTDNDKPVE-AIREIWSNINQPHVVATLPGYNARRTILGAIASIDVKYSTACEFVGGSLSRATFNEAKARRETAL--AAGDMSKLSGKRKERSDNLQEKYPMACSRVEQSIAERTQPSPNLTKTNHDYRRRGDHIRSDADNSLVCVHREKEVRNSPGFEAGA----------------------AEVGSISRRSFDKMVPFYVVEQSLRSCLCVHYYRAKLITVALCQLWSTLHHGDTSDSGCTCTCGFC-SDGACRTFLPFATAKSVHGMGDLSDLLLCEKGIARHA--SAG-----------------KRHSSVVLVITAVSSDR-RFPASSAALGA----------IASTSEGQAGKPTDDDDGDWAPRVASDSSRPKKLTISPKNS------------------------EKYSGDTLLTGGSTTPNGAHSVFVFDFQEQLKLMEQDEVQSQHWQHERVTIFPCPIHCKWKGR---------------DNAWVQHVMFKIMTEHVPALMRKLGAPAMVRAIFFTDNCAKQFKCRFHFGWLASHEVMIRDNNGGSTNVPVHVEHHYFGSCHGNSGSDSEGANTKSTTRQNIINQTWVVQGPRHLSTLLGESMDFILEEPTEEEEMIFEASRTSSRGGDQLLVTKTCIIGTEEGVGGRKQMQGEEDFSGHEEPNTLLGRKYIFQAAGDIPPAVRSASRSESKAIKVEGCQVISKIVATETPGVVATYTLSCLK-----GETEKCNLFREGIMEAPAEWSRR-RSNDDEETTKEREMELMFTRMRNPLPYGSVALMRVRPEEYRGLDIVPIFIGRKAPSDYNSSFAKDGMFSEGDVMVWIHDV-FSHVRG----VEYDVPNVLPVDENRAVPLASLAGLGQGLEGYMEEVSRASRTT 889
BLAST of mRNA_P-littoralis_Contig84.78.1 vs. uniprot
Match: A0A6H5KFD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD4_9PHAE) HSP 1 Score: 409 bits (1051), Expect = 2.650e-123 Identity = 234/526 (44.49%), Postives = 305/526 (57.98%), Query Frame = 3
Query: 2061 VYFVWDSRVWAYSFQVLSDDMAQDNAWVQHVMSMLLDDKIPALLRKIGADPMTNATIFTDNCAKQFKCKYHSGWVADSGVNARDKMGVPTGRSVHVEHHYFGACHGKNVSDSEGGVTKTWTRANVRNMSWRVSSADDLCKKLQKDLSFLLTNATDEERTSWEINPLHQLKSGQLLMRKVIGGKTRSQYNGTCPVKKESNTLLGRDYIFVKASDVTQAKRDGARSEAKAIPVQGCQMISRTAATKTPGVLATYTL---------SCRC-DACRCNQPERCPLFLKGITAAPLEWSRRIRSTDQAGSAREELLEEMYSRISAALPYGSICVLRVDPEDYGGRDIVPVFIGRKAPSPWSREFAADGMFSHGDTMVWIHDMELVDPSGTDEEVEFLIPETLSEDQMRAVPLASFAGVGLGLEHYMEIVSHQSAS--TQRYRMKEGMTKVARSTAVLISTNPGSVFPEVDPAASARVQTATLSKEDKLRAPLKKNLFATGTLVRQGFEAPKIGSTRRWRGKKKFYAEVVDI 3602
+YF W RVWA SFQVLSDD QDNAW Q VM L+ + +P L+RK+GA M A FTDNCAK+FKC+ H GW+A V RD G T VH EHHYFG+CHGK+V S LC L + + F+L T EE T +E + QLL+ V G ++R + T V K+ NTLLGR +IF A D+ A R +RSE KAI V+GCQ S+ AT+TPGV+ATYTL SC C + CR + E+C LF +GI AP EWSRR RS D + ++ +E M++R+ LPYGS+ ++RV PE Y G+DIVP+FIGRKAPS ++ FA DGMFS GD MVWIHD+ S VE+ +P L D+ RA+PL S AG+G G+E YME VS S + T RYRM+ + + A S V++S P F + P A + K D+ RA ++ +L G +V +GF+AP G WRG + A+VVD+
Sbjct: 120 IYFKWKGRVWANSFQVLSDDRTQDNAWAQDVMFKLMTEHVPVLMRKLGAPAMVRAIFFTDNCAKRFKCRLHFGWLASHEVIIRDINGESTNVPVHAEHHYFGSCHGKSVQ-----------------------SPRHLCTLLGESVDFILEEPTKEEMT-FEASRTSSSGGDQLLVTTVWGSESRCKEGKTFLVTKKPNTLLGRKHIFQAAGDILHAVRSASRSELKAIKVEGCQANSKIVATETPGVVATYTLEVSRRTVGSSCFCCELCRKGETEKCNLFREGIMEAPAEWSRR-RSNDDEETTKKREIELMFTRMRNPLPYGSVALMRVRPEQYRGQDIVPIFIGRKAPSDYTSSFAKDGMFSEGDVMVWIHDVFSHVRS-----VEYDVPNVLPVDENRAIPLTSLAGLGQGIEGYMEEVSRASRTSLTTRYRMRRDVVEGALSKLVVMSKRPQDAFVDCRP--------AKMRKIDRRRAHVQPSLVEAGAIVEKGFKAPPQGRDTAWRGLRVIQAKVVDV 607
BLAST of mRNA_P-littoralis_Contig84.78.1 vs. uniprot
Match: A0A6H5L1G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G9_9PHAE) HSP 1 Score: 310 bits (794), Expect = 9.690e-89 Identity = 183/461 (39.70%), Postives = 236/461 (51.19%), Query Frame = 3
Query: 1881 IPHRRQYQIQRSAFDELRATLRPGHVLLVVDFQERLSVKDQDEVQSQHWDNQSTTIFPCVVYFVWDSRVWAYSFQVLSDDMAQDNAWVQHVMSMLLDDKIPALLRKIGADPMTNATIFTDNCAKQFKCKYHSGWVADSGVNARDKMGVPTGRSVHVEHHYFGACHGKNVSDSEGGVTKTWTRANVRNMSWRVSSADDLCKKLQKDLSFLLTNATDEERTSWEINPLHQLKSGQLLMRKVIGGKTRSQYNGTCPVKKESNTLLGRDYIFVKASDVTQAKRDGARSEAKAIPVQGCQMISRTAATKTPGVLATYTLSC---------------------------------RCDACRCNQPERCPLFLKGITAAPLEWSRRIRSTDQAGSAREELLEEMYSRISAALPYGSICVLRVDPEDYGGRDIVPVFIGRKAPSPWSRE-FAADGMFSHGDTMVWIHDM 3161
+PH + +IQR++ TL G V+ V DFQE+ + +QDEVQSQHW + S TIF C +Y W +R+WAYS+QVLSDD QDNAW A P FTDNCAKQFKC++H GW+A V RD G T VHVEHHYFG+CHGK+V LC L + + F+L T+EE +E + + QLLM K+I R +I A D+ A R +RSE+KAI V+GCQ I + AT+TPGV+ATYTLSC C+ CR + E C L +GI P EWSRR RS D + +E +E + +R+ LPYGS+ ++ V PE+Y G+DIVP+FIGRKAPS ++ F DGMFS GD MVWIHD+
Sbjct: 4 LPHPTE-RIQRTSL-----TLEEGTVVYVFDFQEQRQLMEQDEVQSQHWQHDSVTIFRCPIYLKWKARMWAYSYQVLSDDRTQDNAW---------------------ALPPWCELFFTDNCAKQFKCRFHFGWLASYEVMIRDNHGESTNVPVHVEHHYFGSCHGKSVQGPR-----------------------HLCTLLGESMDFILEEPTEEEEIIFEASRTSSRRGDQLLMTKII-----------------------RKFILQAAGDILPAVRSASRSESKAIRVEGCQPICKIVATETPGVVATYTLSCLNFHDGPWSVAPIGVFYLLDLVSMSHFPALLSASCELCRKGETEECNLLREGIMEGPAEWSRR-RSNDDEEATKEREMEVILTRMRIPLPYGSVALMPVRPEEYRGQDIVPIFIGRKAPSNYTTSSFEKDGMFSEGDVMVWIHDV 390
BLAST of mRNA_P-littoralis_Contig84.78.1 vs. uniprot
Match: A0A6H5JXK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK3_9PHAE) HSP 1 Score: 216 bits (551), Expect = 2.480e-58 Identity = 129/331 (38.97%), Postives = 171/331 (51.66%), Query Frame = 3
Query: 1881 IPHRRQYQIQRSAFDELRATLRPGHVLLVVDFQERLSVKDQDEVQSQHWDNQSTTIFPCVVYFVWDSRVWAYSFQVLSDDMAQDNAWVQHVMSMLLDDKIPALLRKIGA---DPMTNATIFTDNCAKQFKCKYHSGWVADSGVNARDKMGVPTGRSVHVEHHYFGACHGK-----------------------------NVSDSEGGVTKTWTRANVRNMSWRVSSADDLCKKLQKDLSFLLTNATDEERTSWEINPLHQLKSGQLLMRKVIGGKTRSQYNGTCPVKKESNTLLGRDYIFVKASDVTQAKRDGARSEAKAIPVQGCQMISR 2777
+PH + +IQR++ LR + + QE+L + +QDEVQ QHW +++ TIFPC +YF W RVWAYSFQVLSD +++GA M A FTDNCAKQFKC++H GW+A V RD G T VHVEHH+FG+CHGK + SD +G TK T N+ N +W V LC L + + F+L T+EE +E + QLLM K+ GG++R + T V K+ NTLLGR YIF A D+ A R +RSE+KAI V+GCQ IS+
Sbjct: 8 VPHPTE-RIQRNS-----PYLRGRYGCFRLRLQEKLQLMEQDEVQLQHWQHENVTIFPCPIYFKWKGRVWAYSFQVLSDYRKSG--------------------QRVGAACAPTMMRAIFFTDNCAKQFKCRFHFGWLASHEVIIRDNNGGSTNVPVHVEHHHFGSCHGKRDDXFAITTAGLPTYQCMWSITTLGAATGSGSDIKGANTKGTTTQNIINQTWVVQGPRHLCTLLGEAMDFILEEPTEEEEMIFEASSTSSRGGDQLLMTKLWGGESRCKERKTFLVTKKPNTLLGRKYIFQAAGDILPAVRSASRSESKAIKVEGCQAISK 312
BLAST of mRNA_P-littoralis_Contig84.78.1 vs. uniprot
Match: A0A6H5JZH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH6_9PHAE) HSP 1 Score: 163 bits (413), Expect = 6.670e-41 Identity = 111/269 (41.26%), Postives = 145/269 (53.90%), Query Frame = 3
Query: 2700 VTQAKRDGARSEAKAIPVQGCQMISRTAATKTPGVLATYTLSCRCDACRCNQPERCPLFLKGITAAPLEWSRRIRSTDQAGSAREELLEEMYSRISAALPYGSICVLRVDPEDYGGRDIVPVFIGRKAPSPWSREFAADGMFSHGDTMVWIHDMELVDPSGTDEEVEFLIPETLSEDQMRAVPLASFAGVGLGLEHYMEIVSHQSAS--TQRYRMKEGMTKVARSTAVLISTNPGSVFPEVDPAASARVQTATLSKEDKLRAPLKKNLF 3500
+ A R +RSE+KAI V+GCQ+IS+ AT+TPGV+ATYT + E+C LF +GI AP EWSRR RS D + RE +E M++R LPYGS+ ++ APS + FA DGMFS GD MVWIHD G VE+ +P L D+ RAVPL S AG+G G+E YME VS S + T RYRM+ + ARS V +S P F + P A + K D+ RA ++ +LF
Sbjct: 13 ILPAIRSASRSESKAIKVEGCQVISKIVATETPGVVATYT-----RRPWKGETEKCNLFREGIMEAPAEWSRR-RSNDDEETTRERKMELMFTRTRNPLPYGSVALMC-------------------APSDRTSSFAKDGMFSEGDGMVWIHDF-FRHVRG----VEYDVPNVLPVDENRAVPLTSLAGLGQGIEGYMEEVSRASRTSLTTRYRMRRDVVDSARSNLVFMSKRPQDAFVDCRP--------AKMRKIDRRRAHVQPSLF 243
BLAST of mRNA_P-littoralis_Contig84.78.1 vs. uniprot
Match: A0A6H5K6V5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6V5_9PHAE) HSP 1 Score: 102 bits (255), Expect = 3.470e-21 Identity = 65/176 (36.93%), Postives = 94/176 (53.41%), Query Frame = 3
Query: 3081 APSPWSREFAADGMFSHGDTMVWIHDMELVDPSGTDEEVEFLIPETLSEDQMRAVPLASFAGVGLGLEHYMEIVS--HQSASTQRYRMKEGMTKVARSTAVLISTNPGSVFPEVDPAASARVQTATLSKEDKLRAPLKKNLFATGTLVRQGFEAPKIGSTRRWRGKKKFYAEVVDI 3602
APS ++ FA DGMFS GD MVW HD+ VE+ + D+ +AVPL S AG+G G+E YME VS ++++ ++RYRM+ + + ARS V+IS P F + P + K D+ RA + LF +G + ++AP G WRG + A VVD+
Sbjct: 10 APSDYTSSFAKDGMFSEGDVMVWNHDVY-----SHIRGVEYDVHNVFPVDENKAVPLTSPAGLGQGIERYMEEVSRAYRTSLSRRYRMRRDVGESARSNLVVISKRPQDAFVDCRP--------TKMRKIDRRRAHDQSRLFLSGCNSEERYKAPPQGRDTAWRGLRVIQANVVDV 172
BLAST of mRNA_P-littoralis_Contig84.78.1 vs. uniprot
Match: A0A7M7GEZ9_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7GEZ9_STRPU) HSP 1 Score: 84.3 bits (207), Expect = 1.740e-12 Identity = 81/325 (24.92%), Postives = 137/325 (42.15%), Query Frame = 3
Query: 1542 GRVEAHKAACISRKCFKCKHKQNLLFGCPKNRGDRNRHLLH---SPVEGSRGPGELRWDMFT--TVDDGVALTDVGDEDGDYDPRGGQDTRRKRKAVISQLGSVDDFFKELEEILALYIPHRRQYQIQRSAFDELRATLRPGHVLLVVDFQERLSVKDQDEVQSQHWDNQSTTIFP--CVVYFVWDSRVWAYSFQVLSDDMAQDNAWVQHVMSMLLDDKIPALLRKIGADPMTNATIFTDNCAKQFKCKYHSGWVADSGVNARDKMGVPTGRSVHVEHHYFGACHGKNVSDSEGGVTKTWTRANVRNMSWRVSSADDL---CKKL 2486
G + HK++CI R+C C HLL +P+ G E+ W + TV+ GG+D R+ ++++ G ++D EL++ + H Q S + +L+++L G VL+V DF E + ++Q E+QS HW + + TI P C + + S ++ D+ D + ++ + + L K+ + F+D A Q+K K G D + A VPT HY+G+CHGK SD E V K + +++A+DL CK++
Sbjct: 456 GTQKYHKSSCIQRRCGSC-----------------GVHLLIDQLTPLIQQHGGKEISWRKWERKTVN-----------------AGGKDVVRQE--LVTKTGKLEDCISELQDEVEPLSTHLFHAMWQHSQYSQLKSSLPKGWVLMVADFAENYTCRNQQEIQSAHWSHNTVTIHPIVCTYHCPKCDELMDESLIFITADVKHD----YNAVNTFMCTSVEYLQNKLT--DVQQIVRFSDGAACQYKSK---GPFTDVAM-ADTVYKVPT------SFHYYGSCHGKGPSDGESAVVKRSASQAALARNVVMNTAEDLFLHCKEI 728 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig84.78.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig84.78.1 >prot_P-littoralis_Contig84.78.1 ID=prot_P-littoralis_Contig84.78.1|Name=mRNA_P-littoralis_Contig84.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1145bp MWRCALELSTSRTPKHDASYACRVNPLTPVTTRFPLLPALASSSRAPLGNback to top mRNA from alignment at P-littoralis_Contig84:448216..464648- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig84.78.1 ID=mRNA_P-littoralis_Contig84.78.1|Name=mRNA_P-littoralis_Contig84.78.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=16433bp|location=Sequence derived from alignment at P-littoralis_Contig84:448216..464648- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig84:448216..464648- >mRNA_P-littoralis_Contig84.78.1 ID=mRNA_P-littoralis_Contig84.78.1|Name=mRNA_P-littoralis_Contig84.78.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3435bp|location=Sequence derived from alignment at P-littoralis_Contig84:448216..464648- (Pylaiella littoralis U1_48)back to top |