prot_P-littoralis_Contig84.64.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig84.64.5
Unique Nameprot_P-littoralis_Contig84.64.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length264
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig84.64.5 vs. uniprot
Match: D7FVT8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT8_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 1.340e-119
Identity = 182/256 (71.09%), Postives = 206/256 (80.47%), Query Frame = 0 
Query:   16 IILEVQGRDGRRVSLVAAAGGVPVVPNESMTMLRLALPALDPTESASPAASFLRLNRDPANSVVSLLDPDSWLELENTSRAGRIAVVSSGCWADK--------EVYLRRRRALCRVSRGFQDLRRFARFPASVFNPGASLADTLKAEQRTGIVFPEEARASFLLFDGQARSAWLRSEGVIGGYELLSLEESVELMLEEACFGGAPGQPPEFVPLANRRNSNQWLAAEVGRGRVCVINRLSRPKVVASSWSQYLRVQ 263
            ++LEVQ RDGRR+++  A  G    P    T L+L LPAL  +E+ASPAASFLRLNRDPAN ++  L P+SWLE+E   RAGR+AV SSGCW DK         VY+R+RRAL RVS  FQDLRRFAR P+SVFNPGA+LADT+ AEQRTG++FP+EARASFLLFDGQARS WLRSEGVIGG+ELLSL ESV+LMLEEACF G  G PPEFVPLANRRNSN+WLAAEVG GRVCVI  LSRPKVVASSWS YLRVQ
Sbjct:    6 VVLEVQARDGRRLNIETALPGGECTPT---TTLKLTLPALARSEAASPAASFLRLNRDPANLLLGYLAPESWLEVEQACRAGRVAVASSGCWTDKGVGDGQGKAVYVRQRRALHRVSGAFQDLRRFARSPSSVFNPGATLADTMNAEQRTGVLFPDEARASFLLFDGQARSGWLRSEGVIGGFELLSLAESVDLMLEEACFRGESGPPPEFVPLANRRNSNEWLAAEVGGGRVCVIKPLSRPKVVASSWSHYLRVQ 258
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig84.64.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVT8_ECTSI1.340e-11971.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018958Knr4/Smi1-like domainPFAMPF09346SMI1_KNR4coord: 145..261
e-value: 3.9E-7
score: 30.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig84contigP-littoralis_Contig84:414318..420259 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig84.64.5mRNA_P-littoralis_Contig84.64.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig84 412269..420420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig84.64.5 ID=prot_P-littoralis_Contig84.64.5|Name=mRNA_P-littoralis_Contig84.64.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=264bp
MSCRNIISSRPEKGEIILEVQGRDGRRVSLVAAAGGVPVVPNESMTMLRL
ALPALDPTESASPAASFLRLNRDPANSVVSLLDPDSWLELENTSRAGRIA
VVSSGCWADKEVYLRRRRALCRVSRGFQDLRRFARFPASVFNPGASLADT
LKAEQRTGIVFPEEARASFLLFDGQARSAWLRSEGVIGGYELLSLEESVE
LMLEEACFGGAPGQPPEFVPLANRRNSNQWLAAEVGRGRVCVINRLSRPK
VVASSWSQYLRVQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018958Knr4/Smi1-like_dom