mRNA_P-littoralis_Contig84.46.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig84.46.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI) HSP 1 Score: 184 bits (466), Expect = 6.150e-52 Identity = 87/94 (92.55%), Postives = 90/94 (95.74%), Query Frame = 1
Query: 1 EKDVRDALARHTRGQTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKAYGEHHPSHKKRLHLFAHEGEKALKYFKMATELCVKDRIRVTFE 282
E+DVRDALAR TRGQTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKAYGEHHPSHK+RLHLFAHEGEKALKYF+MAT LC KD IRVTFE
Sbjct: 664 ERDVRDALARQTRGQTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKAYGEHHPSHKQRLHLFAHEGEKALKYFEMATRLCAKDGIRVTFE 757
BLAST of mRNA_P-littoralis_Contig84.46.1 vs. uniprot
Match: D7G319_ECTSI (FirrV-1-A34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G319_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 1.100e-18 Identity = 45/75 (60.00%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 10 VRDALARHTRGQTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKAYGEHHPSHKKRLHLFAHEGEKAL-KYF 231
VRDALA G+ E TPAG+IDV + EVIE+K++K WK G+GQV AY HPS KRLHLFAH GE KYF
Sbjct: 55 VRDALASLVGGEPEVETPAGNIDVLSGTEVIEVKYYKQWKHGLGQVLAYHCFHPSLAKRLHLFAHAGEVGTQKYF 129
BLAST of mRNA_P-littoralis_Contig84.46.1 vs. uniprot
Match: D8LFH9_ECTSI (FirrV-1-A34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH9_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 2.460e-18 Identity = 46/95 (48.42%), Postives = 59/95 (62.11%), Query Frame = 1
Query: 1 EKDVRDALARHTRGQTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKAYGEHHPSHKKRLHLFAHEGEKAL-KYFKMATELCVKDRIRVTFE 282
E R+ALA G+ E TP+G ID D VIE+K+ WK G+GQV AY H+P +RLHLFAH G+K KYF+MA +C ++VTFE
Sbjct: 48 ESSAREALASLIGGEREVETPSGFIDK-PSDAVIEVKYHNRWKDGLGQVLAYQSHYPRLARRLHLFAHIGDKDTDKYFEMAKSVCYAHAVKVTFE 141
BLAST of mRNA_P-littoralis_Contig84.46.1 vs. uniprot
Match: B5LW94_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LW94_9PHYC) HSP 1 Score: 84.7 bits (208), Expect = 2.610e-17 Identity = 47/99 (47.47%), Postives = 59/99 (59.60%), Query Frame = 1
Query: 10 VRDALARHTRGQTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKAYGEHHPSHKKRLHLFA--------HEGEKALKYFKMATELCVKDRIRVTFE 282
+RD LA G+TE TP G IDV T EVIE+KH++ + G GQV YGE+HP KKRLHLFA + E + +MA ++CV I VTFE
Sbjct: 293 IRDKLAESLGGKTEVRTPCGRIDVLTSTEVIEVKHYRMFLHGYGQVMGYGEYHPLLKKRLHLFALIEDVRSDRKIEDLDRKIEMAEKMCVTSNIEVTFE 391
BLAST of mRNA_P-littoralis_Contig84.46.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 1.900e-16 Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 1
Query: 10 VRDALARHTRGQTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKAYGEHHPSHKKRLHLFAHEGEKAL-KYFKMATELCVK 258
VRDALA G TE TP+G IDV + EVIE+K+++ WK G+GQV AY H+P +RLHLFAH G++ KY ++A + K
Sbjct: 287 VRDALASLVGGTTEVETPSGYIDVLSETEVIEVKYYRQWKDGLGQVLAYQSHYPRLARRLHLFAHTGDRDTDKYCELAKAIAFK 370
BLAST of mRNA_P-littoralis_Contig84.46.1 vs. uniprot
Match: A0A6H5L5N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N7_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 7.800e-15 Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 10 VRDALARHTRGQTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKAYGEHHPSHKKRLHLFAH 204
VRDALA G TE TP+G IDV + EVIE+K+++NWK G+GQV Y H+P +RLHLFAH
Sbjct: 721 VRDALAFVVGGTTEVETPSGYIDVLSETEVIEVKYYRNWKEGLGQVLPYQSHYPRLSRRLHLFAH 785
BLAST of mRNA_P-littoralis_Contig84.46.1 vs. uniprot
Match: K9VSH3_9CYAN (Uncharacterized protein n=2 Tax=Oscillatoriales TaxID=1150 RepID=K9VSH3_9CYAN) HSP 1 Score: 75.9 bits (185), Expect = 1.230e-14 Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 1
Query: 40 GQTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKAYGEHHPSHKKRLHLFAHEGEKALKYFKMATELCVKDRIRVTFE 282
G+TE TPAGSID+ T ++IE+KH KNWK+ +GQV Y ++PSH+KR+HLF E L K + C + I +T+E
Sbjct: 168 GETEVLTPAGSIDLLTTSQLIEVKHIKNWKTAIGQVLVYSAYYPSHEKRIHLFGTCHESFLDTVK---QHCQRQNIVLTWE 245
BLAST of mRNA_P-littoralis_Contig84.46.1 vs. uniprot
Match: A0A2P0VMM5_9PHYC (Uncharacterized protein n=1 Tax=Tetraselmis virus 1 TaxID=2060617 RepID=A0A2P0VMM5_9PHYC) HSP 1 Score: 65.5 bits (158), Expect = 2.060e-11 Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 1
Query: 1 EKDVRDALARHTRG-QTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKAYGEHHPSHKKRLHLFAHEGEKALKYFKMATELCVKDRIRVT 276
E VRD LA+ G + E +G ID+ T E+IE+K WK+ +GQ+ AYGE P HKKR+HLF + + ++++A C + + +T
Sbjct: 29 ESTVRDRLAKQLVGSRIEVPCSSGLIDIVTPTEIIEVKRAPLWKAAMGQILAYGEDFPKHKKRVHLFGKDDQ----HYRLAAVTCERFGVALT 117
BLAST of mRNA_P-littoralis_Contig84.46.1 vs. uniprot
Match: L7RE44_9VIRU (KilA N-domain protein n=1 Tax=Acanthamoeba polyphaga moumouvirus TaxID=1269028 RepID=L7RE44_9VIRU) HSP 1 Score: 60.8 bits (146), Expect = 4.920e-9 Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 1 EKDVRDALARHTRGQTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKAYGEHHPSHKKRLHLF 198
EK ++ L + G TE T G ID+ T++ ++EIK + NWK+ +GQ+ AY + +P KR++LF
Sbjct: 150 EKQLKLKLQKKLGGTTEVPTSCGKIDLLTKNYIVEIKTYNNWKAALGQILAYSDQYPDKNKRIYLF 215
BLAST of mRNA_P-littoralis_Contig84.46.1 vs. uniprot
Match: A0A2P1EKB3_9VIRU (KilA-N domain-containing protein n=3 Tax=Mimivirus TaxID=315393 RepID=A0A2P1EKB3_9VIRU) HSP 1 Score: 59.3 bits (142), Expect = 2.260e-8 Identity = 27/66 (40.91%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 1 EKDVRDALARHTRGQTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKAYGEHHPSHKKRLHLF 198
EK +++ L ++ G E T G+ID+ T++ +IEIK++ NWK G+GQ+ +Y HP K L+LF
Sbjct: 179 EKIIQEELQKNLGGLIEVKTKVGAIDLLTKNTIIEIKNYDNWKHGLGQLLSYSIFHPDKTKCLYLF 244 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig84.46.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig84.46.1 >prot_P-littoralis_Contig84.46.1 ID=prot_P-littoralis_Contig84.46.1|Name=mRNA_P-littoralis_Contig84.46.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=94bp EKDVRDALARHTRGQTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKback to top mRNA from alignment at P-littoralis_Contig84:346198..346479+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig84.46.1 ID=mRNA_P-littoralis_Contig84.46.1|Name=mRNA_P-littoralis_Contig84.46.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=282bp|location=Sequence derived from alignment at P-littoralis_Contig84:346198..346479+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig84:346198..346479+ >mRNA_P-littoralis_Contig84.46.1 ID=mRNA_P-littoralis_Contig84.46.1|Name=mRNA_P-littoralis_Contig84.46.1|organism=Pylaiella littoralis U1_48|type=CDS|length=282bp|location=Sequence derived from alignment at P-littoralis_Contig84:346198..346479+ (Pylaiella littoralis U1_48)back to top |