prot_P-littoralis_Contig12.200.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig12.200.1
Unique Nameprot_P-littoralis_Contig12.200.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length113
Homology
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BLAST of mRNA_P-littoralis_Contig12.200.1 vs. uniprot
Match: D7G8P5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8P5_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 3.700e-40
Identity = 74/111 (66.67%), Postives = 84/111 (75.68%), Query Frame = 0 
Query:    2 KDLAVRLPLLVRLDGSLKEPPLCGTKVNPDHPGLTKQKGRFGLDRAGNLIMGYHKTDKPNMCKRGGTIPVTTAKPPYAVPTFAIPPLCAGKIVSNKTYNDRERKLAEVNKE 112
            +DLA +L LLV+ DGSLK+ PLC T+VNPDHPGLTK +  FGLDR G LIMG H     N C  GGTIPVTTA PPY VP FAI PL AGKIVSNKT+N RER  A++N+E
Sbjct:  426 RDLAAKLRLLVQPDGSLKDAPLCDTEVNPDHPGLTKGRSTFGLDREGALIMGVHNGQSLNRCVGGGTIPVTTAAPPYRVPHFAIAPLLAGKIVSNKTHNKRERTRAKLNEE 536
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8P5_ECTSI3.700e-4066.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:807272..807610 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.200.1mRNA_P-littoralis_Contig12.200.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig12 807268..807737 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig12.200.1 ID=prot_P-littoralis_Contig12.200.1|Name=mRNA_P-littoralis_Contig12.200.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=113bp
MKDLAVRLPLLVRLDGSLKEPPLCGTKVNPDHPGLTKQKGRFGLDRAGNL
IMGYHKTDKPNMCKRGGTIPVTTAKPPYAVPTFAIPPLCAGKIVSNKTYN
DRERKLAEVNKE*
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