prot_P-littoralis_Contig836.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig836.11.1
Unique Nameprot_P-littoralis_Contig836.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length219
Homology
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BLAST of mRNA_P-littoralis_Contig836.11.1 vs. uniprot
Match: A0A6H5KYD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD5_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 4.000e-21
Identity = 40/66 (60.61%), Postives = 50/66 (75.76%), Query Frame = 0 
Query:  114 MSMFRLQPDKTTKLWLPLQATAPHVDDAFAAIRIAVTYHYEDCGAQGYIFALFCGLVPLSWIEKFA 179
            MS FR QPD  T LW+PL+  A H++D F A++IA TYH +DC  QGY+FALFCGLVPLSW++  A
Sbjct:    1 MSTFRQQPDLRTTLWVPLRPVASHLEDPFGAVKIAATYHSKDCVPQGYLFALFCGLVPLSWMDTLA 66
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig836.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYD5_9PHAE4.000e-2160.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig836contigP-littoralis_Contig836:31161..47299 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig836.11.1mRNA_P-littoralis_Contig836.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig836 30891..49091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig836.11.1 ID=prot_P-littoralis_Contig836.11.1|Name=mRNA_P-littoralis_Contig836.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=219bp
MSALSVSILAVRGIPWQPSTDRFYSVRVRHGQQEKRTRPVGHRHHHHNQH
HHRKKQDDAATDDEESTALKGEDFEIEDTEDYDDTVDIALVYEAKTSTPE
EDESICHSTATIAMSMFRLQPDKTTKLWLPLQATAPHVDDAFAAIRIAVT
YHYEDCGAQGYIFALFCGLVPLSWIEKFAFLPREGDSDKCGTKESTYRPW
YCNKAFMIKEPKRPPSVT*
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