mRNA_P-littoralis_Contig832.34.10 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig832.34.10 vs. uniprot
Match: D7FYV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV5_ECTSI) HSP 1 Score: 421 bits (1083), Expect = 8.300e-147 Identity = 195/228 (85.53%), Postives = 209/228 (91.67%), Query Frame = 1
Query: 184 ITKIVLVWVSSSIFVQPFVRGNAGCSLFNWCNGHGTCNTGTRTCTCFEGWGADTDLTLYRAADCSARVCPAGKAWGDVPSGSLNAHQEQECSSRGICNRESGECECFDGFSGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNNSLCSSWREDDSVTWDEEMIYGCVCDSAWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCFNVTSSSVYSGAA 867
+ K L+ VSS IF V+GNAGCSLFNWCNGHGTCNTGTRTCTC+EGWGADTDLTLYRAADCSARVCPAGKAWGDVP+GSL+AHQEQECS RG+C+R+SGECECFDGF+GAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSN + S EDD+VTWDEEMI+GCVCDS WEVGLGAGQTQEPEWFGPDCSLRHCPSGDDP+TDVDETDCFNVTSSSVY G A
Sbjct: 3 LAKFFLLLVSSWIFTT--VQGNAGCSLFNWCNGHGTCNTGTRTCTCYEGWGADTDLTLYRAADCSARVCPAGKAWGDVPTGSLSAHQEQECSGRGLCDRDSGECECFDGFTGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNVTTYSG--EDDTVTWDEEMIFGCVCDSKWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPSTDVDETDCFNVTSSSVYLGTA 226
BLAST of mRNA_P-littoralis_Contig832.34.10 vs. uniprot
Match: A0A5S9HY60_9PHAE (Mastigoneme protein 3 (Fragment) n=1 Tax=Ectocarpus sp. TaxID=74372 RepID=A0A5S9HY60_9PHAE) HSP 1 Score: 258 bits (658), Expect = 8.290e-84 Identity = 118/135 (87.41%), Postives = 126/135 (93.33%), Query Frame = 1
Query: 463 RGICNRESGECECFDGFSGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNNSLCSSWREDDSVTWDEEMIYGCVCDSAWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCFNVTSSSVYSGAA 867
+GIC+R+SGECECFDGF+GAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSN + S EDD+VTWDEEMI+GCVCDS WEVGLGAGQTQEPEWFGPDCSLRHCPSGDDP+TDVDETDCFNVTSSSVY G A
Sbjct: 2 KGICDRDSGECECFDGFTGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNVTTYSG--EDDTVTWDEEMIFGCVCDSKWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPSTDVDETDCFNVTSSSVYLGTA 134
BLAST of mRNA_P-littoralis_Contig832.34.10 vs. uniprot
Match: A0A8J2X5G2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X5G2_9STRA) HSP 1 Score: 254 bits (648), Expect = 7.420e-81 Identity = 117/213 (54.93%), Postives = 144/213 (67.61%), Query Frame = 1
Query: 220 IFVQPFVRGNAGCSLFNWCNGHGTCNTGTRTCTCFEGWGADTDLTLYRAADCSARVCPAGKAWGDVPSGSLNAHQEQECSSRGICNRESGECECFDGFSGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNNSLCSSWREDDSVTWDEEMIYGCVCDSAWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDP-NTDVDETDCFNVTSSSVY 855
+ ++P G+ C N+CNGHG C T TC C+EGWGA TD+ LY+ DCS R CP+G AW DV S S AH ECS +G CN+ +G C+C GFSG AC+R GC DCS HG+CV+MK +A +ALPLS + + + WD++ IYGCVCDS+W VGLG GQ QEPEWFGP CSLRHCPSGDDP T VDET+C VT++ Y
Sbjct: 8 LLLRPTRAGD--CIDMNFCNGHGHCEPATDTCDCYEGWGAKTDVALYKLHDCSGRTCPSGPAWADVASDSKTAHAPAECSGKGTCNKATGTCKCVSGFSGDACQRFGCLYDCSGHGQCVSMKKMATMPNALPLSKPATYTGLET--TERWDQDRIYGCVCDSSWPVGLGPGQRQEPEWFGPWCSLRHCPSGDDPYTTHVDETNCTGVTAAGGY 216
BLAST of mRNA_P-littoralis_Contig832.34.10 vs. uniprot
Match: A0A7S4E8E0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8E0_9STRA) HSP 1 Score: 252 bits (643), Expect = 4.370e-80 Identity = 116/208 (55.77%), Postives = 141/208 (67.79%), Query Frame = 1
Query: 220 IFVQPFVRGNAGCSLFNWCNGHGTCNTGTRTCTCFEGWGADTDLTLYRAADCSARVCPAGKAWGDVPSGSLNAHQEQECSSRGICNRESGECECFDGFSGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNNSLCSSWREDDSVTWDEEMIYGCVCDSAWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDP-NTDVDETDCFNVT 840
+ ++P G+ C N+CNGHG C T TC C+EGWGA TD+ LY+ DCS R CP+G AW DV S S AH ECS +G CN+ +G C+C GFSG AC+R GC DCS HG+CV+MK +A +ALPLS + + + WD++ IYGCVCDS+W VGLG GQ QEPEWFGP CSLRHCPSGDDP T VDET+C VT
Sbjct: 58 LLLRPTRAGD--CIDMNFCNGHGHCEPATDTCDCYEGWGAKTDVALYKLHDCSGRTCPSGPAWADVASDSKTAHAPAECSGKGTCNKATGTCKCVSGFSGDACQRFGCLYDCSGHGQCVSMKKMATMPNALPLSKPATYTGLET--TERWDQDRIYGCVCDSSWPVGLGPGQRQEPEWFGPWCSLRHCPSGDDPYTTHVDETNCTGVT 261
BLAST of mRNA_P-littoralis_Contig832.34.10 vs. uniprot
Match: A0A8K1CPX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPX8_PYTOL) HSP 1 Score: 250 bits (638), Expect = 1.260e-79 Identity = 107/189 (56.61%), Postives = 138/189 (73.02%), Query Frame = 1
Query: 274 CNGHGTCNTGTRTCTCFEGWGADTDLTLYRAADCSARVCPAGKAWGDVPSGSLNAHQEQECSSRGICNRESGECECFDGFSGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNNSLCSSWREDDSVTWDEEMIYGCVCDSAWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCFNVT 840
CNGHG CNT T+TCTCFEG+GA TD+ +Y+A DCS RVCPAG +WG +P+ AH ECS G+C+R SG+C+C+ G+ G+AC+RS C + CS HGRCV+M+ +A + A PLS + +D+ TWD+ I+GC+CDS+W VGLG+GQ Q+ EWFGPDCSL CP+GDDP T VDETDC T
Sbjct: 5 CNGHGRCNTATKTCTCFEGYGAATDVAVYKAPDCSQRVCPAGPSWGGIPTDETVAHALAECSDMGVCDRSSGQCKCYRGYEGSACQRSTCLNGCSGHGRCVSMREMATITSAFPLSPAATYEG--AEDTTTWDQNRIFGCLCDSSWAVGLGSGQRQQSEWFGPDCSLLRCPTGDDPLTAVDETDCNGKT 191
BLAST of mRNA_P-littoralis_Contig832.34.10 vs. uniprot
Match: A0A7S1CQ07_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQ07_9STRA) HSP 1 Score: 248 bits (632), Expect = 3.960e-78 Identity = 108/198 (54.55%), Postives = 140/198 (70.71%), Query Frame = 1
Query: 241 RGNAG-CSLFNWCNGHGTCNTGTRTCTCFEGWGADTDLTLYRAADCSARVCPAGKAWGDVPSGSLNAHQEQECSSRGICNRESGECECFDGFSGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNNSLCSSWREDDSV-TWDEEMIYGCVCDSAWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDC 828
R +AG C CNGHGTCNT T C C++GWG+ +D+T YRA DCS RVCP+G AW D + + AH ECS+ GIC+R +G+C CF G+ G AC+RS CP++CS HG+CV++ +A ++A P+ S ++ ++V TWDE+ I+GCVCDS+W V L +G TQEPEWFG DCSLRHC SGDDP T DETDC
Sbjct: 24 RADAGACVDLGDCNGHGTCNTATTQCACYDGWGSSSDVTTYRAPDCSKRVCPSGNAWADAATATNTAHALAECSNAGICDRTTGKCRCFTGYDGEACQRSACPNECSGHGKCVSIAQMASENNAQPVDIESPAFTYGGSEAVATWDEDKIFGCVCDSSWTVSLASGATQEPEWFGADCSLRHCASGDDPMTTADETDC 221
BLAST of mRNA_P-littoralis_Contig832.34.10 vs. uniprot
Match: A0A1V9ZX19_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX19_9STRA) HSP 1 Score: 247 bits (630), Expect = 5.410e-78 Identity = 111/199 (55.78%), Postives = 139/199 (69.85%), Query Frame = 1
Query: 244 GNAGCSLFNWCNGHGTCNTGTRTCTCFEGWGADTDLTLYRAADCSARVCPAGKAWGDVPSGSLNAHQE-QECSSRGICNRESGECECFDGFSGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNNSLCSSWREDDSVTWDEEMIYGCVCDSAWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCFNV 837
G C+ N CNGHG CNT T+ CTC GWGA +++L++A DCS R CP G +W VP+ + AH ECS GICN ++GEC+CFDGF+GAACER+GCP+DCS HG C +M+ LA +ALPLS S S + + TWD++ I+GC+CDS W VGLGAGQTQ P+WFG DCSL HCPS +DP V +TDC V
Sbjct: 25 GGDMCNQLNDCNGHGFCNTQTKVCTCQAGWGAPNEISLFKAPDCSQRTCPVGLSWSSVPTSASTAHDVLAECSDMGICNPQTGECQCFDGFNGAACERAGCPNDCSGHGICRSMRYLATYLNALPLSTLSN-SYYGLQSTTTWDQDRIFGCICDSTWSVGLGAGQTQVPQWFGADCSLLHCPSNNDPLFGVTDTDCNGV 222
BLAST of mRNA_P-littoralis_Contig832.34.10 vs. uniprot
Match: A0A067CMU3_SAPPC (EGF-like domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CMU3_SAPPC) HSP 1 Score: 246 bits (627), Expect = 1.230e-77 Identity = 112/205 (54.63%), Postives = 139/205 (67.80%), Query Frame = 1
Query: 256 CSLFNWCNGHGTCNTGTRTCTCFEGWGADTDLTLYRAADCSARVCPAGKAWGDVPSGSLNAHQE-QECSSRGICNRESGECECFDGFSGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNNSLCSSWREDDSVTWDEEMIYGCVCDSAWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCFNVTSSSVYSGAA 867
C+ N CNGHG CNT T+ CTC GWGA TD+++++ DCS R CPAG +W VP+ + H ECS GICN +GEC CF GF G ACE SGCP+ CS HGRC++M+ LA + ALPLS + + + TWD+E I+GCVCDSAW VGL +GQTQEPEWFG DCSLRHCPS +DP + V +TDC V ++ S A
Sbjct: 23 CATLNNCNGHGFCNTATKVCTCQVGWGAPTDISIWKTPDCSLRTCPAGLSWNSVPTSATTGHTVLAECSDMGICNTITGECNCFPGFQGLACELSGCPNACSGHGRCLSMRYLASQAAALPLSPATTYYGLQT--TTTWDQERIFGCVCDSAWPVGLASGQTQEPEWFGADCSLRHCPSNNDPLSGVTDTDCAGVAAAGSASVGA 225
BLAST of mRNA_P-littoralis_Contig832.34.10 vs. uniprot
Match: A0A835YN50_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN50_9STRA) HSP 1 Score: 246 bits (627), Expect = 4.100e-77 Identity = 106/184 (57.61%), Postives = 135/184 (73.37%), Query Frame = 1
Query: 253 GCSLFNWCNGHGTCNTGTRTCTCFEGWGADTDLTLYRAADCSARVCPAGKAWGDVPSGSLNAHQEQECSSRGICNRESGECECFDGFSGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNNSLCSSWREDD-SVTWDEEMIYGCVCDSAWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDP 801
GC N CNGHG C+ C C+EGWGAD+D++LY+A DCSARVCP+G AWGDVP+ AH ECS G+C+R+SG C CF GF G AC+R CP++CS HGRC+++K + +ALPLS+N+ + D+ + TWDE+ I+GCVCDS+W VGL A +TQ EWFGPDCSLRHCPSG+DP
Sbjct: 38 GCDQHNNCNGHGVCSQQDAVCLCYEGWGADSDISLYKAQDCSARVCPSGPAWGDVPTAKYTAHAALECSGMGLCDRDSGVCRCFTGFEGDACQRMACPNNCSGHGRCMSLKNMVNEPNALPLSSNA--HEYGGDELATTWDEDRIFGCVCDSSWAVGLKATETQAVEWFGPDCSLRHCPSGNDP 219
BLAST of mRNA_P-littoralis_Contig832.34.10 vs. uniprot
Match: K3WVA2_GLOUD (EGF-like domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVA2_GLOUD) HSP 1 Score: 245 bits (625), Expect = 4.520e-77 Identity = 111/204 (54.41%), Postives = 141/204 (69.12%), Query Frame = 1
Query: 256 CSLFNWCNGHGTCNTGTRTCTCFEGWGADTDLTLYRAADCSARVCPAGKAWGDVPSGSLNAHQEQECSSRGICNRESGECECFDGFSGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNNSLCSSWREDDSVTWDEEMIYGCVCDSAWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCFN-VTSSSVYSGA 864
C++ CNGHG CNTGT+TC CFEG+GA +D+ +Y+A DCS R+CPAG +W +PS + H + ECS G C+R SG+C C G+ GAAC+R CP+ CS HG+C++MKALA T+ A PLS + S + TWD+ I+GC+CDS+W VGL AGQ Q EWFG DCSL CPSGDDP T VDETDC V + V +GA
Sbjct: 41 CAMLANCNGHGRCNTGTKTCACFEGYGAVSDIAVYKAPDCSLRICPAGPSWFGIPSAADTGHPKAECSDAGFCDRSSGQCRCLLGYEGAACQRYVCPNGCSGHGQCLSMKALAPTTSAFPLSAATTYSGAEA--TSTWDQNRIFGCLCDSSWSVGLAAGQRQLSEWFGADCSLMRCPSGDDPMTAVDETDCSGKVAAGDVGTGA 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig832.34.10 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig832.34.10 >prot_P-littoralis_Contig832.34.10 ID=prot_P-littoralis_Contig832.34.10|Name=mRNA_P-littoralis_Contig832.34.10|organism=Pylaiella littoralis U1_48|type=polypeptide|length=292bp VLNLAANSACVQCIVPDVSSLGATAVPSLDTQIDRPANKLRSLDLFVEQIback to top mRNA from alignment at P-littoralis_Contig832:106988..108730- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig832.34.10 ID=mRNA_P-littoralis_Contig832.34.10|Name=mRNA_P-littoralis_Contig832.34.10|organism=Pylaiella littoralis U1_48|type=mRNA|length=1743bp|location=Sequence derived from alignment at P-littoralis_Contig832:106988..108730- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig832:106988..108730- >mRNA_P-littoralis_Contig832.34.10 ID=mRNA_P-littoralis_Contig832.34.10|Name=mRNA_P-littoralis_Contig832.34.10|organism=Pylaiella littoralis U1_48|type=CDS|length=876bp|location=Sequence derived from alignment at P-littoralis_Contig832:106988..108730- (Pylaiella littoralis U1_48)back to top |