prot_P-littoralis_Contig831.17.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig831.17.5
Unique Nameprot_P-littoralis_Contig831.17.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length163
Homology
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BLAST of mRNA_P-littoralis_Contig831.17.5 vs. uniprot
Match: D7G7K7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7K7_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 9.680e-87
Identity = 131/157 (83.44%), Postives = 141/157 (89.81%), Query Frame = 0 
Query:    2 SKVNSELLDLQLKAEAPVAEASCPRMRDMWMQEKAKDEPNLDIKFQYALTLIKTRSHDKNREGMSLLEGLAENSYHVGECYYSMALALYRMGRYEECRSMVEIVLRMDPDMPAAQTLHKAVQEATARRKTQEVLTVVAGGVMMSGLGVVAALLLNYK 158
            SKVNSELLD QLKAEAPVAEASCPR+RDMW+QE  KDEPNLDIKFQYALTLIKTRSHDKNREGMSLLEGLAE+SYHVGECYYSMALALYRMGRYEECRSMVEIVLRMDPDMPAAQTLHKAVQEA ARR  + V  V AGG  ++GLG++   LL+ +
Sbjct:    3 SKVNSELLDQQLKAEAPVAEASCPRLRDMWLQESNKDEPNLDIKFQYALTLIKTRSHDKNREGMSLLEGLAESSYHVGECYYSMALALYRMGRYEECRSMVEIVLRMDPDMPAAQTLHKAVQEAVARRN-ETVRNVAAGGAAVAGLGILVGALLSRR 158
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BLAST of mRNA_P-littoralis_Contig831.17.5 vs. uniprot
Match: A0A835YNR4_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR4_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 8.510e-17
Identity = 45/107 (42.06%), Postives = 66/107 (61.68%), Query Frame = 0 
Query:    9 LDLQLKAEAPVAEASCPRMRDMWMQE-KAKDEPNLDIKFQYALTLIKTRSHDKNREGMSLLEGLAENSYHVGECYYSMALALYRMGRYEECRSMVEIVLRMDPDMPA 114
            LD QL  E  +A+ + P +R ++++  +  D  +L++KF  +L LIK+     N EG+ LL  L    YH  +CYYS+AL LYRMGR+EE R+  E++LR   D PA
Sbjct:   10 LDAQLSHEENLAQDALPNVRKVYVKSLETGDAADLNLKFSLSLLLIKSAKRRDNEEGLELLSELVAAGYHTTDCYYSVALGLYRMGRFEESRTQCEMLLRRIDDPPA 116
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig831.17.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7K7_ECTSI9.680e-8783.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YNR4_9STRA8.510e-1742.06Cyclin N-terminal domain-containing protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 15..161
e-value: 4.4E-27
score: 96.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 22..156
IPR028061Fis1, C-terminal tetratricopeptide repeatPFAMPF14853Fis1_TPR_Ccoord: 80..126
e-value: 1.3E-8
score: 34.9
NoneNo IPR availablePANTHERPTHR13247:SF0MITOCHONDRIAL FISSION 1 PROTEINcoord: 25..148
IPR016543Mitochondria fission 1 proteinPANTHERPTHR13247TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11coord: 25..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig831contigP-littoralis_Contig831:91654..95755 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig831.17.5mRNA_P-littoralis_Contig831.17.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig831 89796..95764 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig831.17.5 ID=prot_P-littoralis_Contig831.17.5|Name=mRNA_P-littoralis_Contig831.17.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=163bp
MSKVNSELLDLQLKAEAPVAEASCPRMRDMWMQEKAKDEPNLDIKFQYAL
TLIKTRSHDKNREGMSLLEGLAENSYHVGECYYSMALALYRMGRYEECRS
MVEIVLRMDPDMPAAQTLHKAVQEATARRKTQEVLTVVAGGVMMSGLGVV
AALLLNYKRRNG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR028061Fis1_TPR_C
IPR016543Fis1