prot_P-littoralis_Contig830.21.6 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig830.21.6
Unique Nameprot_P-littoralis_Contig830.21.6
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1000
Homology
BLAST of mRNA_P-littoralis_Contig830.21.6 vs. uniprot
Match: D7G143_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G143_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 6.300e-67
Identity = 260/798 (32.58%), Postives = 318/798 (39.85%), Query Frame = 0
Query:  346 WGLGLLRKWAADDSVFKALERPTPCEEEVRHRHGYPSRRRVQARFKMDKSRVHRQLCSRRCSNRTVNSNNSDNNDNKGLINTKECTRKDRGGDPEHCVCIDGGRWGSRTGGVSVCNCLGTDRPKTSGGLVVPYKKGRDAATAPGSSENGMPGVMTTAPTGSEAKREGCLRLAAPAGERGLSLAWISSNAVGEEISVDIFTPGG-------------------DQCKSPAG-------------------------------------------------------TGSSSQWTALYRGPGP-TFDVEGLEPCRRYRFRACLSISAGARKRRG-WRHASFCTLPDRPPAPVAVHWSPGVPAVGATCDNAIRTEPFRFGNNRAIGGGTAGLGQLA-----GQRGRGGSSLWKNLRLELRVVGVPKLRRKVDRCSTPENV--TQKNVACRQTLG------EDWGTWVVEYWTRLRRS-------QYQVALEW------TDHPEKGSTFSA--------------------QDGDESDFENQELVRAAKTSAG--WQRAYRGRRAECVVGSLQQGTPYVFRCARENADGQVGPWSAYLRCVVPISSGKRSSSSGC--------------RG----VGNCNINNNG-DGIHCTAAPPPIPRPPAKQPWQQQRFDLLVPALVEAFAGLIDAGDRQIARATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTNASLDAVDKKSGTEGTPPRHRDHLHHQHVLSRGGEEG-TKTIVWDEHWDPERGAPFFRLRGQNLSVWQVPAL 999
            WGL LLR+WAADD+VF A ERP+P EE+ +     PS                                        G +N +                                   G  R + +   VVP K     A A            ++A TG      G LRLAA   ER LSL   +  +VGEE++VD+FTPGG                    +C    G                                                       TGS +QWTALYRGP      V+GLEP RRYRFR+ LS S GA +R G WRHASFCTLP+RPPAPVA  W PG PA+ A        E  R G++R   GG + L +L+       RG+ G   ++NLRL++ V        +   C  PE +  T +     +T G      ED G WVVE  TRLR +         + ALEW      T  P +    SA                              QEL       AG  W+  YRGRR+ CVVGSL  G+ Y FRCARENADGQVGPWS  L C VP S+ K    S C              RG     G+  +  NG       A   P P   +K    Q RF+LLVPALV+AFA L + GDR I   +T                    XXXXXXXXX                G   +           S   ++G T  +VWDEHWD ER  PFF LRG++LSVWQ+PAL
Sbjct:   26 WGLSLLRQWAADDTVFDAFERPSPSEEDAQR----PSN---------------------------------------GHLNDRS----------------------------------GARRREQAMETVVPCKGSSTTARA------------SSAGTGGLGHGGGDLRLAATPRERELSLVLEAMPSVGEEVAVDLFTPGGVGACMRNGQMQAQARTALCSRCAPSGGGGRTALCSVVKNYPNRSCWFFSFAVFRECSSAVTKATLSPPPSPCQLQLNVDFRWTGSRAQWTALYRGPSRGKLRVDGLEPGRRYRFRSRLSTSMGAGRRGGSWRHASFCTLPERPPAPVAAGWLPGGPALSA--------ETPRLGDDRDTSGGNSRLRRLSVLSGGDARGKNG---FENLRLKMGVE-------RSSTCGRPEGIPLTSETATRNKTEGPWHKSAEDCGMWVVECRTRLRFTGGYAWCTDDRTALEWAGGVGATKGPAESGVNSAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXQELRSEESMDAGAPWELVYRGRRSMCVVGSLSLGSSYAFRCARENADGQVGPWSTDLWCTVPGSTKKFDRRSSCGNRKRNASDNRKTARGDPHVAGDATLLLNGISSPDAIAGNQPRPMSESKATEFQPRFNLLVPALVDAFARLAEDGDRWIG--STRSTPLRPPPRRAVATRRPAAXXXXXXXXXXXXXXXXXXXXXXXXHGASSKG----------SGSAQQGETAKMVWDEHWDSERRIPFFSLRGRDLSVWQIPAL 704          
BLAST of mRNA_P-littoralis_Contig830.21.6 vs. uniprot
Match: A0A6H5KWT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT3_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 1.060e-34
Identity = 119/339 (35.10%), Postives = 145/339 (42.77%), Query Frame = 0
Query:  719 WVVEYWTRLRRS-------QYQVALEWT---------------------DHPEKGST-----FSAQDGDESDFENQELVRAAKTSAG--WQRAYRGRRAECVVGSLQQGTPYVFRCARENADGQVGPWSAYLRCVVPISS----------GKRSSSSGCRGVGNCNINNNGDGIH---------CTAAPPPIPRPPAKQPWQQQRFDLLVPALVEAFAGLIDAGDRQIARATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTNASLDAVDKKSGTEGTPPRHRDHLHHQHVLSRGG---EEG-TKTIVWDEHWDPERGAPFFRLRGQNLSVWQVPAL 999
            WVVE  TRLR +         + ALEW                      D     ST      SAQ   + D   QEL     T AG  W+  YRGRR+ECVVGSL  G+ Y FRCARENADGQVGPWS  LRC VP S+           ++S++S  R     + +  GD              A   P P P +K    Q RF+LLVPALV+ FA L + G R I    +                              T A+                  D  H     S+G    ++G T  +VWDEHWD ER  PFF LRG++LSVWQ+PAL
Sbjct:    2 WVVECRTRLRFTGGYAWCTDDRTALEWAGGASATKGPTESGVNSAGAAADDRNNSSTTINLCHSAQGDADDDGGGQELRSEEGTGAGAPWELVYRGRRSECVVGSLSLGSSYAFRCARENADGQVGPWSTDLRCTVPGSTENFDRRSSGGNRKSNTSDNRMTSRADPHVAGDATRLLNGIGSSDAIAGNQPRPMPESKATEFQPRFNLLVPALVDVFARLAEDGSRWIGSTHSTPLRQPPPRAVASS---------------RTAATSXXXXXXXXXXXXXXXAHDREHQHWASSKGSGSAQQGETAKMVWDEHWDSERRIPFFCLRGRDLSVWQIPAL 325          
BLAST of mRNA_P-littoralis_Contig830.21.6 vs. uniprot
Match: A0A6H5KI78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI78_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 4.950e-28
Identity = 128/418 (30.62%), Postives = 166/418 (39.71%), Query Frame = 0
Query:  346 WGLGLLRKWAADDSVFKALERPTPCEEEVRHRHGYPSRRRVQARFKMDKSRVHRQLCSRRCSNRTVNSNNSDNNDNKGLINTKECTRKDRGGDPEHCVCIDGGRWGSRTGGVSVCNCLGTDRPKTSGGLVVPYKKGRDAATAPGSSENGMPGVMTTAPTGSEAKREGCLRLAAPAGERGLSLAWISSNAVGEEISVDIFTPGGD-------------------QCKSPAGTG------------------------------------SSSQWTALYRGPGP-TFDVEGLEPCRRYRFRACLSISAGARKRRG-WRHASFCTLPDRPPAPVAVHWSPGVPAVGATCDNAIRTEPFRFGNNRAIGGGTAGLGQLA-----GQRGRGGSSLWKNLRLELRVVGVPKLRRKVDRCSTPENV 701
            WGL LLR+WAADD+VF A ERP+P EE+ +     PS                                        G +N +                                   G  R + +   VVP K     A A            ++A TG      G LRL A   ER LSLA  ++ +VGEE++VD+FTPGG+                   +C +P G G                                    S +QWTALYRG       V+GLEPCRRYRFR+ LS   GA +R G WRHASFCTLP+RPPAPVA  W PG PA+ A        E    G++    GG + L +L+       RG+ G   +KNLRL++          ++  C  PE +
Sbjct:    8 WGLSLLRQWAADDTVFNAFERPSPSEEDAQR----PSN---------------------------------------GHLNDRS----------------------------------GVRRREQARATVVPCKGSSTTARA------------SSACTGGLGHGGGDLRLTATPRERELSLALEATPSVGEEVAVDLFTPGGEIACVQKGRMQSRARTAFCSRC-APFGGGRRTASCRVVKNYLSRSCSLLSFALFRECSSAVTKQRSRAQWTALYRGRSRGKLHVDGLEPCRRYRFRSRLSTPMGAGRRGGSWRHASFCTLPERPPAPVAAGWLPGGPALSA--------ETPCLGDDLDTSGGNSCLRRLSILSGGDARGKNG---FKNLRLKMG-------EERISTCGRPEGI 317          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig830.21.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G143_ECTSI6.300e-6732.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWT3_9PHAE1.060e-3435.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI78_9PHAE4.950e-2830.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 726..818
e-value: 3.1E-7
score: 32.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 911..965
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 912..926
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..163
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 768..816

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig830contigP-littoralis_Contig830:104022..110812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig830.21.6mRNA_P-littoralis_Contig830.21.6Pylaiella littoralis U1_48mRNAP-littoralis_Contig830 103249..112282 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig830.21.6 ID=prot_P-littoralis_Contig830.21.6|Name=mRNA_P-littoralis_Contig830.21.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1000bp
MMSETTDTTGKGLARIYPEDAAASLGPPSVERGSLLQRRRRRLRAWCSES
WRSFRPSTNADLHPLPNEPPAHELIFLCKSRDSAAERRPRPNAPKDEDDK
SGCLRITMSQDERAAAAGPAMDRRAAEQRPLLVPCLRSGEISSSTRGGRE
WHHQQQGTEQDTTYDADGFAEVFPATNGERVVAGGEGKQSDGSDEQDGLR
SRTTKHRPESRAGGQETRKTSMVVACVRAGDWILPKSCGGILTSRGGGVT
LPGGKKGVAWLRVEAVSVGEECIILATQGTGGKMRPELRASPKLLELSPV
MLPGALVVRQTAPLDGSGGRDRGDRTTAAGAGRVEAFRLPVLCARWGLGL
LRKWAADDSVFKALERPTPCEEEVRHRHGYPSRRRVQARFKMDKSRVHRQ
LCSRRCSNRTVNSNNSDNNDNKGLINTKECTRKDRGGDPEHCVCIDGGRW
GSRTGGVSVCNCLGTDRPKTSGGLVVPYKKGRDAATAPGSSENGMPGVMT
TAPTGSEAKREGCLRLAAPAGERGLSLAWISSNAVGEEISVDIFTPGGDQ
CKSPAGTGSSSQWTALYRGPGPTFDVEGLEPCRRYRFRACLSISAGARKR
RGWRHASFCTLPDRPPAPVAVHWSPGVPAVGATCDNAIRTEPFRFGNNRA
IGGGTAGLGQLAGQRGRGGSSLWKNLRLELRVVGVPKLRRKVDRCSTPEN
VTQKNVACRQTLGEDWGTWVVEYWTRLRRSQYQVALEWTDHPEKGSTFSA
QDGDESDFENQELVRAAKTSAGWQRAYRGRRAECVVGSLQQGTPYVFRCA
RENADGQVGPWSAYLRCVVPISSGKRSSSSGCRGVGNCNINNNGDGIHCT
AAPPPIPRPPAKQPWQQQRFDLLVPALVEAFAGLIDAGDRQIARATTATT
ATATAIANMRPIQPFIPPPPPSPPAANTNASLDAVDKKSGTEGTPPRHRD
HLHHQHVLSRGGEEGTKTIVWDEHWDPERGAPFFRLRGQNLSVWQVPAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR036116FN3_sf