mRNA_P-littoralis_Contig12.168.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig12.168.1
Unique NamemRNA_P-littoralis_Contig12.168.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig12.168.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 423 bits (1088), Expect = 4.660e-144
Identity = 193/312 (61.86%), Postives = 244/312 (78.21%), Query Frame = 1
Query:    1 FRERFRVPHAFFLRLVELSREKKWFSDGGADAAGCEGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDATFSKMLESVRKDVECLFGILKGRFRILKLRLAYHCREDIDNIF-TCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 933
            FRE FR+P+ FF+ LV L +++ WF  G  DA+G  GIPV+LK+L  LQIL RGNCF DI  +S +S   AAATFH+F + FA+EM+ EHI+LPTG YQ +VM  Y +LGF+GA GSTDVTH+ WGMCP+   RS+TGKEG+PT+A++VTVDH  R + VT GFTG+TNDK+I+RYD AV  IR + +Y ++E+ + +ADGT +  KGCYL+VDNGYH+WVTL+ PSKYP D +D  FSK LESVRKDVEC FGI+KGRFRILKL + YH +EDIDN+F TCCILHNMLHS+D  S  +E  +WAG+AGLH+
Sbjct:  116 FRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHN 427          
BLAST of mRNA_P-littoralis_Contig12.168.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 399 bits (1025), Expect = 3.680e-136
Identity = 187/264 (70.83%), Postives = 216/264 (81.82%), Query Frame = 1
Query:  145 QILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDATFSKMLESVRKDVECLFGILKGRFRILKLRLAYHCREDIDNIF-TCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 933
            Q+LG+GNCFDD+ QLS MSKSMA  TFHKFC++FA EMF+EHIYLPTGTY DEVM  + +LG+TGA GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRKA+GT+  R+GC+LIVDNGYHEWVTL+APSKYP   +D  FS+ LESVRKDV C        FRILKLR+ YH RE +DNIF TCCILHNMLH+FDG+ VF+EN DW GSAG HD
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGC--------FRILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 297          
BLAST of mRNA_P-littoralis_Contig12.168.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 1.620e-135
Identity = 188/312 (60.26%), Postives = 233/312 (74.68%), Query Frame = 1
Query:    1 FRERFRVPHAFFLRLVELSREKKWFSDGGADAAGCEGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDATFSKMLESVRKDVECLFGILKGRFRILKLRLAYHCREDIDNIF-TCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 933
            FR  FRVP+ FF+ LVEL R++ WF  G +D  G + +PVELK+L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LES RKDVEC FGILKGRFRI KL + +H +E IDN+F TCCILHNMLHSFD      E  +WAGSAGLH+
Sbjct:  132 FRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 443          
BLAST of mRNA_P-littoralis_Contig12.168.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 397 bits (1020), Expect = 2.180e-135
Identity = 196/291 (67.35%), Postives = 225/291 (77.32%), Query Frame = 1
Query:    1 FRERFRVPHAFFLRLVELSREKKWFSDGGADAAGCEGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDATFSKMLESVRKDVECLFGILKGRFRILKLRLAYHCREDIDNIF-TCCILHNMLHS 870
            FRERFRVP+ FF  LV+LSR K+WFS G  DAA  EGIP+ELK+L      G+GNCFDD+ QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM  + +LG TGA GSTDVTH+G  MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT GF G TNDKT +RYD+ V  IR    Y +REYKLRK +GTE TR+GC+LIVDNGY+E              +D  FS+ LESVRKDVEC FGILKGRFRILKLR+ YH RE IDNIF TCCILHNMLH+
Sbjct:   96 FRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_P-littoralis_Contig12.168.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 377 bits (969), Expect = 2.430e-127
Identity = 184/311 (59.16%), Postives = 223/311 (71.70%), Query Frame = 1
Query:    1 FRERFRVPHAFFLRLVELSREKKWFSDGGADAAGCEGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDATFSKMLESVRKDVECLFGILKGRFRILKLRLAYHCREDIDNIF-TCCILHNMLHSFDGMSVFKENVDWAGSAG 924
            FR  FRVP +FFLRLV L + K WF+  G DAA  +  PVE K+L  L ILGRGNCF  I Q+S MS       FHKFCK+FA+EM++EHIYLP+      D VM  Y +LGF+GA+GS DVTH+GW  CP+ L RS+TGKEG PT+ ++VTV+HAGRAI VT+GFT +TNDKT V +DA V+ IR +  Y ++ + +   DGT  T KGCYL+VDNGYH+W  LM P+KYP   +D  FSK LESVRKDVEC FGILKG FRI K+ +AYH +E IDN+F TCCILHNMLH+FDGM    EN  W  SAG
Sbjct:   56 FRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAG 366          
BLAST of mRNA_P-littoralis_Contig12.168.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 1.540e-123
Identity = 183/314 (58.28%), Postives = 223/314 (71.02%), Query Frame = 1
Query:    1 FRERFRVPHAFFLRLVELSREKKWFSDGGADAAGCEGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDATFSKMLESVRKDVECLFGILKGRFRILKLRLAYHCREDIDNIF-TCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 933
            FRE FRVP+ FFLRLVEL ++K WF+    DA G    PVE K+L  L ILGRGN F  I  LS MS       FH+FC++FA EM++EHI+LP+      D VM  Y KLGF GA+GSTDVTH+GW  CP+  GRS+TGKEG PT+ ++VTV+HAGR + VT+GFTG+TNDKTI+  D AV  IR +K Y ++ + + K DGT  T KGCYLIVDNGYH+W  L+ PSKYP    D  FSK LESVRKDVEC FGILK RFRILKL + Y  +E +D +F TCCILHNMLH+ DGM   +E+V+W GSA L +
Sbjct:   85 FREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQN 398          
BLAST of mRNA_P-littoralis_Contig12.168.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 1.350e-120
Identity = 183/336 (54.46%), Postives = 220/336 (65.48%), Query Frame = 1
Query:   13 FRVPHAFFLRLVELSREKKWFSDGGADAAGCEGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYK----------------------------DREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDATFSKMLESVRKDVECLFGILKGRFRILKLRLAYHCREDIDNIF-TCCILHNMLHSFDGMSVFKENVDWAGSAGL 927
            FRVP+  FLRLV L + K WFS    DA G    PVE K+L  L ILGRGNCF  I Q+S MS       FHKFC++FA+EM++E I+LPT      D VM  Y +LGFTGA+GS DVTH+ W  CP+   RS+TGKEGFPT+A++VTVDHAGRAI VT+GFTG+TNDKTIV +D AV+ I  +K Y                             ++ + +   DGT  T KGCYL+VDNGYH+W  L+ PSKYP   +D  FSK LESVRKDVEC FGILKGRFRILKL + Y  +E IDN+F TC ILHNMLH+FDGM    EN +W  SAG+
Sbjct:   47 FRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV 382          
BLAST of mRNA_P-littoralis_Contig12.168.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 2.540e-118
Identity = 168/281 (59.79%), Postives = 208/281 (74.02%), Query Frame = 1
Query:   94 AAGCEGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDATFSKMLESVRKDVECLFGILKGRFRILKLRLAYHCREDIDNIF-TCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 933
            +A C   P   ++L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LES RKDVEC FGILKGRFRI KL + +H +E IDN+F TCCILHNMLHSFD      E  +WAGSAGLH+
Sbjct:   72 SARCCFPPPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 352          
BLAST of mRNA_P-littoralis_Contig12.168.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 345 bits (884), Expect = 4.430e-114
Identity = 167/265 (63.02%), Postives = 193/265 (72.83%), Query Frame = 1
Query:  142 LQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDATFSKMLESVRKDVECLFGILKGRFRILKLRLAYHCREDIDNIF-TCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 933
            L +LG+GNCFDD+ QLS MS SMA ATFHKFC++FA EMF+EHI+ PT TY DE M  + +LG TGA  STDVTH+   MCPFTLGRSFTGKEGFPT+A+EVTVDHA RA+ VT GFTGA NDKT++ YD+ V  IR    Y +R+YKLRKA+GTE TR+GC+ IVDNGYHE                            DVEC FGILKGRFRILKLR+ YH RE IDNIF TCCI HNMLH+FDG+ +F+EN DW GSAG HD
Sbjct:  102 LTVLGKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIVDNGYHE----------------------------DVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTDWTGSAGHHD 338          
BLAST of mRNA_P-littoralis_Contig12.168.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 341 bits (875), Expect = 6.270e-110
Identity = 177/319 (55.49%), Postives = 201/319 (63.01%), Query Frame = 1
Query:  226 HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNG----------YHE---------------WVTLMAPSKYPGDVDDATFSKMLESVRKDVECLFGILKGRFRILKLRLAYHCREDIDNIF----------------------------------------------------------TCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 933
            HKFC++FA EMF+EHIYL TGTY DEVM  + +LG TGA GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRKA+GTE TR+GC+LIVDNG          +H+               WVTL+APSKYP   +D  FS+ LESVRKDVEC FGILKGRFRILKLR+ YH RE IDNIF                                                          TCCILHNMLH+FDG+ VF+EN DW GSAG HD
Sbjct:  246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 564          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE4.660e-14461.86Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE3.680e-13670.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.620e-13560.26Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE2.180e-13567.35DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JHI0_9PHAE2.430e-12759.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE1.540e-12358.28Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE1.350e-12054.46DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE2.540e-11859.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K872_9PHAE4.430e-11463.02DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KEB6_9PHAE6.270e-11055.49DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:702796..705084 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size933
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.65e-96
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size933
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789511.367458-CDS-P-littoralis_Contig12:702795..7029241680789511.367458-CDS-P-littoralis_Contig12:702795..702924Pylaiella littoralis U1_48CDSP-littoralis_Contig12 702796..702924 +
1680789511.3787763-CDS-P-littoralis_Contig12:703709..7042371680789511.3787763-CDS-P-littoralis_Contig12:703709..704237Pylaiella littoralis U1_48CDSP-littoralis_Contig12 703710..704237 +
1680789511.3898861-CDS-P-littoralis_Contig12:704808..7050841680789511.3898861-CDS-P-littoralis_Contig12:704808..705084Pylaiella littoralis U1_48CDSP-littoralis_Contig12 704809..705084 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.168.1prot_P-littoralis_Contig12.168.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig12 702796..705084 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig12.168.1

>prot_P-littoralis_Contig12.168.1 ID=prot_P-littoralis_Contig12.168.1|Name=mRNA_P-littoralis_Contig12.168.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=311bp
FRERFRVPHAFFLRLVELSREKKWFSDGGADAAGCEGIPVELKILTALQI
LGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQD
EVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVT
VDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKAD
GTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDATFSKMLESVRKDVE
CLFGILKGRFRILKLRLAYHCREDIDNIFTCCILHNMLHSFDGMSVFKEN
VDWAGSAGLHD
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mRNA from alignment at P-littoralis_Contig12:702796..705084+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig12.168.1 ID=mRNA_P-littoralis_Contig12.168.1|Name=mRNA_P-littoralis_Contig12.168.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2289bp|location=Sequence derived from alignment at P-littoralis_Contig12:702796..705084+ (Pylaiella littoralis U1_48)
TTCCGAGAGCGCTTTCGCGTGCCTCACGCCTTCTTCCTGAGGTTGGTGGA GCTGTCGAGGGAGAAGAAGTGGTTCTCAGACGGAGGAGCGGATGCAGCAG GCTGTGAGGGTATCCCAGTAGAGCTCAAGGTGCGCTTAAATATTGACACT TCGTACGAAGCACAACATACTGGAAAAGAAAATAGATGGTATGTGTACAA GTACAAAATATAGCAGCTTTCCACTGCTGTACGTCACACACCGCCGTCCC CCTCATGACCGCAGCACAACTGCTGCACTTGATGAAAGTCTGCATGCCTT TCGGGCCCGGTATATCTGTGAAGCACTTGTAGCTGTAGGGTATGCGAGAC CAATCAAGTGGGTCGACACGACGAGGACTAGCGAATGAACCTATTCTGGA CAACAAAGTGCCGCAGACGGATATCACCACAGCAGTGTGTTGCTGATGCT GCCGAGGATACCGCTGCAGGTTTTTGGGTACTCTTCTGTGCCCCACCCCT GGGTCGGTGGCTATAACGAGGTACTTATATTCCGAACCTTTCTTGATTGG TCATTTCGGGTCGAGTGGATGCGGAAACACGGGAATGCAACCATACATGA CTGCTGTACTGCTGTAGACTGGCGTGCAGAATGGATGGGATGGGAACACA ACACAACTGTATTTATCACGCTTTCACGTGAAGAAAAGCATGCCGTTGCT GCGCCACCACGTGACGCTATTCCGACACAATAGCTGTGACGACGTGTGTA TGTGAAAATCAAAACATCATCCGTAATACGAAATCATGTATCTGCCTGAT TCGCATACACGGACTACTTAAAATGGTAGTTGTCCAGCCGAGCGAATCGG GCAACAGCAACTAGTTGACTGATGGACACTCCCGCTCCCCCTCCCCCCTG ACATTATTCGACAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAAC TGCTTCGACGACATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGC AGCAACGTTCCACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGG AGCATATCTACCTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGC TACCGCAAACTGGGTTTTACTGGAGCAATCGGTTCTACCGACGTCACTCA CGTCGGCTGGGGTATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCA AGGAGGGGTTTCCAACCCTGGCGTTCGAGGTTACCGTCGACCACGCGGGG CGCGCCATTGGCGTCACCCAAGGGTTCACCGGCGCGACCAACGACAAGAC GATCGTCCGCTACGACGCAGCCGTACAGACCATCAGGAACAACAAAGTGT ACAAGGATCGAGAATACAAGCTCAGGAAGGCGGATGGCACGGAGTTCACC CGGAAAGGATGCTATTTGATAGTCGACAACGGCTATCACGAGGTGAGTGT ATTGGGGGCGTGGGGAGTATTAGAATATCCGAACGTAGTGCGTGCTCCGT AACGCTTCGGGTTGATGTGAAGCCCGAAAAAAACACGCCGGTACACCAAA AGCAGACCAATGCCATATTTGTCGGTACTGAATGAGGATCTTTATGGCAT GTCGGTCCCGTGCATCGGGCGTCGACCTTACGCAGCGGCACACCAAGGTA AAAAACGTTTTGCCGCTTCGCGTTCCTTCTATTCGTAGTTCTTTTTGTGC TGGTTCCGTTTGGACGATTGCGTTCACTTTCTCACATTTCGAGCATACAT TACCCCATTTATAACACCAAAGGTTTTAACAAACAAATCTGCTCAGGGGT GGTCAGATGGCAAATATTGTACTTCGAAGTACAAAGTTGTAGGCATCTGT GTTGTCCACATGTCCACACGGTTCCTCGTTTCCCCCGAGGAGTTTGATCG TGAAAATATGCGCGTCGGGGCCTGAGGTTTCCAGAGCCTTTCCGTAGCTC ACCAGTCGTCCCTTTCGACCCCCCCCACTGCTACTGTTGTGCCGTCGTGT GCCAAATCAACAGTGGGTCACCCTCATGGCCCCATCGAAGTACCCGGGTG ACGTGGATGACGCGACCTTCTCCAAGATGCTTGAGAGTGTGCGCAAGGAT GTGGAGTGTTTGTTCGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCT TCGCCTGGCCTACCACTGCAGGGAAGACATCGATAACATCTTCACGTGCT GCATTCTCCACAACATGCTCCACTCCTTCGACGGCATGAGCGTGTTCAAG GAGAACGTCGACTGGGCAGGCAGCGCTGGTCTGCACGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig12:702796..705084+

>mRNA_P-littoralis_Contig12.168.1 ID=mRNA_P-littoralis_Contig12.168.1|Name=mRNA_P-littoralis_Contig12.168.1|organism=Pylaiella littoralis U1_48|type=CDS|length=933bp|location=Sequence derived from alignment at P-littoralis_Contig12:702796..705084+ (Pylaiella littoralis U1_48)
TTCCGAGAGCGCTTTCGCGTGCCTCACGCCTTCTTCCTGAGGTTGGTGGA
GCTGTCGAGGGAGAAGAAGTGGTTCTCAGACGGAGGAGCGGATGCAGCAG
GCTGTGAGGGTATCCCAGTAGAGCTCAAGATCTTGACGGCCCTCCAGATA
CTCGGCAGGGGCAACTGCTTCGACGACATCAACCAGCTGTCGTTAATGAG
CAAATCGATGGCGGCAGCAACGTTCCACAAGTTCTGCAAGAACTTCGCGA
AGGAGATGTTCGAGGAGCATATCTACCTTCCAACAGGAACGTACCAAGAC
GAAGTGATGGACTGCTACCGCAAACTGGGTTTTACTGGAGCAATCGGTTC
TACCGACGTCACTCACGTCGGCTGGGGTATGTGTCCGTTCACCCTTGGCC
GTTCTTTCACGGGCAAGGAGGGGTTTCCAACCCTGGCGTTCGAGGTTACC
GTCGACCACGCGGGGCGCGCCATTGGCGTCACCCAAGGGTTCACCGGCGC
GACCAACGACAAGACGATCGTCCGCTACGACGCAGCCGTACAGACCATCA
GGAACAACAAAGTGTACAAGGATCGAGAATACAAGCTCAGGAAGGCGGAT
GGCACGGAGTTCACCCGGAAAGGATGCTATTTGATAGTCGACAACGGCTA
TCACGAGTGGGTCACCCTCATGGCCCCATCGAAGTACCCGGGTGACGTGG
ATGACGCGACCTTCTCCAAGATGCTTGAGAGTGTGCGCAAGGATGTGGAG
TGTTTGTTCGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTTCGCCT
GGCCTACCACTGCAGGGAAGACATCGATAACATCTTCACGTGCTGCATTC
TCCACAACATGCTCCACTCCTTCGACGGCATGAGCGTGTTCAAGGAGAAC
GTCGACTGGGCAGGCAGCGCTGGTCTGCACGAC
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