mRNA_P-littoralis_Contig83.134.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig83.134.1
Unique NamemRNA_P-littoralis_Contig83.134.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig83.134.1 vs. uniprot
Match: D8LP04_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP04_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 5.830e-114
Identity = 183/248 (73.79%), Postives = 204/248 (82.26%), Query Frame = 1 
Query:    1 MRALVTLFLAAAAVPLEAQFGMPPKPKSKPSKGDLPAIKCGVCQALAEHLHEKVAEMRQEAPFGKVHEDDISTAVEGACDPETKEGRWITQVDIVEEGGYLELKKPGGFFHCKEECETIAKSCSLLVEEEVDVEELVVALWKNKLGASELQKEACGEWSDRCEGK-RVKAPKDRKDFELEEKSAKDFAVAEMVEKLQSTMGGMGGGMGMYGPDDLGAMEEMMAQTGXXXXXXFGDFDPMAGGMDGMEF 741
            MRAL  L LAAAA+PL AQFGMPPKPKS P KGDL AIKCGVCQ LAEHL+EKVAEMR+ APFGKVHEDDIST +EGACDP TKEGRWIT+ DIVEEGGYLELKK   F HCKEECETIAKSC++LV++E+DVEE+VVALWKNKLG SELQK ACGEWSDRC GK RVKAPKDR+D+E E K+AKDF VAE +E+LQ++MGG     G+YGPDDL AM+ MM+Q G      F D   M GGM GMEF
Sbjct:    1 MRALAVLTLAAAAIPLNAQFGMPPKPKSDPVKGDLAAIKCGVCQGLAEHLYEKVAEMREAAPFGKVHEDDISTVIEGACDPATKEGRWITEYDIVEEGGYLELKKQDSFSHCKEECETIAKSCTVLVDDELDVEEVVVALWKNKLGLSELQKAACGEWSDRCSGKKRVKAPKDRQDYEFEPKTAKDFEVAEAMERLQNSMGGXXX-PGIYGPDDLAAMDAMMSQXGDMGQDPFADDFDM-GGMGGMEF 246
[Close]
BLAST of mRNA_P-littoralis_Contig83.134.1 vs. uniprot
Match: A0A7J7D9W8_TRIWF (Uncharacterized protein n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7D9W8_TRIWF)

HSP 1 Score: 90.1 bits (222), Expect = 5.090e-16
Identity = 65/192 (33.85%), Postives = 100/192 (52.08%), Query Frame = 1 
Query:   73 KPKSKPSKGDLPAIKCGVCQALAEHLHEKVAEMRQEAPFGKVHEDDISTAVEGACDPETKEGRWITQVDIVEEGGYLELKKPGGFFHCKEECETIAKSCS-LLVEEEVDVEELVVALWKNKLGASELQKEACGEWSDRCEGKRVKAPKDRKDFE-LEEKSAKDFAVAEMVEKLQSTMGGMGGGMGMYGPDDL 642
            KP + P KGD+P IKC VC+ +A  L+++V + + +    K+ E  I    E  C+ + +E  WIT++DIVE+G  LEL +      C  EC+TI ++C  ++   + DV E +    K ++G+  L    C + +  C GK    PKDR   E    K +KD  + +M+  +Q   G     M MY  DDL
Sbjct:   29 KPVAGPRKGDVPYIKCQVCEKIATQLYQQVQKKQAQISPKKISEYQIIEIAENVCNLKKEEADWITRIDIVEQGDKLELVEQDTEGICNSECKTIERACEEVMGYSDTDVAEYLYTA-KPQIGS--LVDYLCKDLTGSCIGKPPPLPKDRLAGEPFMPKPSKDAEMDKMLRDMQGMPGAPN--MQMYSKDDL 215
[Close]
BLAST of mRNA_P-littoralis_Contig83.134.1 vs. uniprot
Match: A0A426ZB01_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426ZB01_ENSVE)

HSP 1 Score: 84.7 bits (208), Expect = 3.620e-14
Identity = 67/193 (34.72%), Postives = 93/193 (48.19%), Query Frame = 1 
Query:   73 KPKSKPSKGDLPAIKCGVCQALAEHLHEKVAEMRQEAPFGKVHEDDISTAVEGACDPETKEGRWITQVDIVEEGGYLELKKPGGFFHCKEECETIAKSCS-LLVEEEVDVEELVVALWKNKLGASELQKEACGEWSDRCEGKRVKAPKDRKDFELEEKSAKDFAVAEMVEKLQSTMGGMGG--GMGMYGPDDL 642
            KP     KGD+P I+C VC+ +A  +  +V     +    KV E  I    E  C+ + +E  WI Q+D+VE+G  LEL + G    C  EC+TI  +C  ++   + DV E V +    +    +L K  C + S  C  K    P DR     E   AK    AEM EK+  +M GM G  GM MY  +DL
Sbjct:   32 KPSPAVRKGDIPFIRCQVCEKIAHQIIHQVKNKEAQISPKKVSEFQIIEIAENICNLKKEEADWILQIDVVEKGDELELVEQGIEGQCNSECKTIEHACQEIMGYSDTDVAEYVFSA---RPSIDQLVKFLCKDLSKACSVKPPPVPTDR--VPGEPFIAKSSKEAEM-EKILKSMEGMPGAPGMKMYSREDL 218
[Close]
BLAST of mRNA_P-littoralis_Contig83.134.1 vs. uniprot
Match: A0A8J5G0C8_ZINOF (Uncharacterized protein n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5G0C8_ZINOF)

HSP 1 Score: 81.3 bits (199), Expect = 5.040e-13
Identity = 64/186 (34.41%), Postives = 91/186 (48.92%), Query Frame = 1 
Query:   94 KGDLPAIKCGVCQALAEHLHEKVAEMRQEAPFGKVHEDDISTAVEGACDPETKEGRWITQVDIVEEGGYLELKKPGGFFHCKEECETIAKSCS-LLVEEEVDVEELVVALWKNKLGASELQKEACGEWSDRCEGKRVKAPKDRKDFELEEKSAKDFAVAEMVEKLQSTMGGMGG--GMGMYGPDDL 642
            KGD+P IKC VC+  A  +  +V +   +    KV E  I    E  C+ + +E  WI Q+D+VE+G  LEL + G    C  EC+TI ++C  ++   + DV E V   +  +    EL    C + S  C  K +  P DR   E      K    A+M +KL  +M GM G  GM MY  +DL
Sbjct:   42 KGDIPFIKCQVCEKAAYQIIHQVKKKEAQISPKKVSEFQIIEIAENICNLKKEEADWILQIDLVEKGDKLELVEQGVEGLCNSECKTIERACQEIMGYSDTDVAEFV---YSTRPSVDELVNFLCKDLSKACSVKPLPLPADRASGEAF--VVKPTKEADM-DKLLRSMEGMPGAPGMKMYSREDL 221
[Close]
BLAST of mRNA_P-littoralis_Contig83.134.1 vs. uniprot
Match: F0Y4P8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4P8_AURAN)

HSP 1 Score: 79.0 bits (193), Expect = 2.820e-11
Identity = 71/233 (30.47%), Postives = 109/233 (46.78%), Query Frame = 1 
Query:   94 KGDLPAIKCGVCQALAEHLHEKVAEMRQEAPF----GK----------VHEDDISTAVEGACDPETKEGRWITQVDIVEEGG---------------------YLEL---KKPGGFFHCKEECETIAKSCSLLVEEEV-DVEELVVALWKNKLGASELQKEACGEWSDRC--EGKRVKAPKDRKDFELEEKSAKDFAVAEMVEKLQSTMGGMGGGMGMYGPDDLGAMEEMMAQ 669
            KGDLP I+C VC+ +A  L  +  + R+ AP     GK            E D++  V G C+   + G W+  VD+VE  G                     +L++   ++ G       E  T  +SC LL ++++ DVEELVV LW+  +     +K AC E S RC  + K V A + R+DFE +   A+D ++ +  E++   M   G  M M   +D+  MEE+  Q
Sbjct:  164 KGDLPCIRCDVCEIVATELWREATKQREAAPLTAASGKPGEKKRKVSTFSEADVNELVVGVCNRRKEMGEWLWYVDLVESQGPPGEGSAWRGLTKKEKASNENFLQVYRAQRGGPIRKWDRESATAKRSCDLLFDDDIGDVEELVVPLWRGDVDEKAFKKLACKELSGRCGKDRKPVNA-QGREDFEYD---AQDKSLLD-TERMMENMAAQGMPMVMQSREDM--MEELYEQ 389
[Close]
BLAST of mRNA_P-littoralis_Contig83.134.1 vs. uniprot
Match: A0A097PST6_CABCA (AT4G29520-like protein (Fragment) n=1 Tax=Cabomba caroliniana TaxID=4426 RepID=A0A097PST6_CABCA)

HSP 1 Score: 68.2 bits (165), Expect = 1.270e-9
Identity = 62/188 (32.98%), Postives = 95/188 (50.53%), Query Frame = 1 
Query:   94 KGDLPAIKCGVCQALAEHLHEKVAEMRQEAPFGKVHEDDISTAVEGACDPETKEGRWITQVDIVEEGGYLELKKPGGFFHCKEECETIAKSCSLLVE-EEVDVEELVVALWKNKLGASELQKEACGEW--SDRCEGKRVKAPKDRKDFELEEKSAKDFAVAEMVEKLQSTMGGMGG--GMGMYGPDDL 642
            KGDLP I+C VC+ +A+ L  +V   R+ AP  K+ E  I    E  C+ +  EG W+ +VDIVE+G  L+L +     HC  EC+T+  +C  +V   + D+ E    L+ +K    +L K AC     +DR  G+    PK  K+ E++              K+  +M G+ G  GM +Y  +DL
Sbjct:    3 KGDLPFIRCQVCEIIAKQLFNQVH--RKIAPK-KISEYQIIEIAENICNLKKHEGDWLLRVDIVEKGDTLQLVEQESEGHCNTECKTLQHACQEVVGYHDTDIAEY---LYNSKPICKDLTK-ACPPPVPTDRIPGEPF-VPKSSKEAEMD--------------KILKSMEGVPGAPGMKVYSKEDL 168
[Close]
BLAST of mRNA_P-littoralis_Contig83.134.1 vs. uniprot
Match: A0A7S2CPR7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CPR7_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 3.660e-7
Identity = 56/206 (27.18%), Postives = 87/206 (42.23%), Query Frame = 1 
Query:   94 KGDLPAIKCGVCQALAEHLHEKVAEMRQEAPFGKV-------------HEDDISTAVEGACDPETKEGRWITQVDIVEE------------------------GGYLELKKPGGFFHCKE-ECETIAKSCSLLVEEEVDVEELVVALWKNKLGASELQKEACGEWSDRCEGK-RVKAPKDRKDFELEEKSAKDFAVAEMVEKLQST 594
            K DL  I C VC+ + E + E   E R EAP   V              ED++   +   C  + K G W+ + D+VE                         G YL ++    ++   + E  T+ +SC  L E+ +DV+EL VALWK +L  + L    C E S+ C  K R K   +R D   E   A+     +M++ ++ +
Sbjct:   47 KYDLKLIGCDVCRFVVEQVREATEEKRAEAPIVSVAVRPGKKERRSSFSEDEVQEILGDVCHRKKKVGAWLWRTDLVEHTAKSTKHNQSFVYRPITKSEKKNGGSYLLIEHHPDYYGVWDREKATVQRSCERLFED-MDVDELSVALWKGELDEAALVSLTCEELSNSCGKKNRPKLMLERDDIAFEVTDAQLVETEQMMQSMEDS 251
[Close]
BLAST of mRNA_P-littoralis_Contig83.134.1 vs. uniprot
Match: A0A8J1Z0W1_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1Z0W1_9DINO)

HSP 1 Score: 62.4 bits (150), Expect = 3.830e-7
Identity = 49/187 (26.20%), Postives = 88/187 (47.06%), Query Frame = 1 
Query:  100 DLPAIKCGVCQALAEHLHEKVAEMRQEAPFGKVHEDDISTAVEGACDPETKEGRWITQVDIVEEG-GYLELKKPGGFFHCKEECETIAKSCSLLVEEEVDVEELVVALWKNKLGASELQKEACGEWSDRCEGKRVKAPKDRKDFELEEKSAKDFAVAEMVEKLQSTMGGMGGGMGMYGPDDLGAMEE 657
            D+ A+ C VC+   E           +A    + ED++    E  C+P+ K GRW+ Q+D+V+E  G + ++  G    C++EC T +++C     E+ D    ++A+ +    A  ++ + C      C+  R       +D E +E  AK   +AEM + ++      G GM MY  +D  +M +
Sbjct:   34 DIKAVSCAVCELAVE-----------KAIGAGLDEDNV----EDLCEPKNKLGRWLAQLDLVDESDGRITVQDMGTAGQCRKECSTASRACRNWALEDTDA---LLAMLRKGSSAGRIKGKLC---KKSCKQYRNLVANRPQDEEFKEVDAK---IAEMEDMMKDMKEKTGMGMKMYSREDFASMSD 196
[Close]
BLAST of mRNA_P-littoralis_Contig83.134.1 vs. uniprot
Match: X6MS99_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MS99_RETFI)

HSP 1 Score: 58.2 bits (139), Expect = 3.510e-5
Identity = 40/122 (32.79%), Postives = 66/122 (54.10%), Query Frame = 1 
Query:   79 KSKPSKGDLPAIKCGVCQALAEHLHEKVAEMRQEAPFGKVHEDDISTAVEGACDP-ETKEGRWITQVDIVEEGGYLELKK---PGGFFHCKEECETIAKSCSLLVEE-EVDVEELVVALWKN 429
            ++KP +     I+C VC+  A+ L   +      +   +  E+ I   ++  C+P E ++G WIT  D+V E G L++K    P    HC  ECETIA +CS ++E+ E+++ E   AL+ N
Sbjct:  156 RAKPHRKWFKYIQCQVCEEAAKQLTRHIKPSSSSST--RKTEEQIYETMDKVCNPYEDEKGGWITMHDLVLEEGKLQMKHINLPNTMGHCGSECETIAYTCSKILEDKEIELSE---ALYSN 272
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig83.134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LP04_ECTSI5.830e-11473.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7J7D9W8_TRIWF5.090e-1633.85Uncharacterized protein n=1 Tax=Tripterygium wilfo... [more]
A0A426ZB01_ENSVE3.620e-1434.72Uncharacterized protein n=1 Tax=Ensete ventricosum... [more]
A0A8J5G0C8_ZINOF5.040e-1334.41Uncharacterized protein n=3 Tax=Zingiber officinal... [more]
F0Y4P8_AURAN2.820e-1130.47Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A097PST6_CABCA1.270e-932.98AT4G29520-like protein (Fragment) n=1 Tax=Cabomba ... [more]
A0A7S2CPR7_9STRA3.660e-727.18Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J1Z0W1_9DINO3.830e-726.20Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
X6MS99_RETFI3.510e-532.79Uncharacterized protein n=1 Tax=Reticulomyxa filos... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig83contigP-littoralis_Contig83:559424..569689 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LP04
Model size2188
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons7
Evalue2.7e-121
EggNOG OGs28MTK@1|root,2QUBV@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_007090.1
Cds size744
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig83.134.1prot_P-littoralis_Contig83.134.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig83 560868..569689 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791693.7304604-UTR-P-littoralis_Contig83:559423..5608671680791693.7304604-UTR-P-littoralis_Contig83:559423..560867Pylaiella littoralis U1_48UTRP-littoralis_Contig83 559424..560867 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791693.7454288-CDS-P-littoralis_Contig83:560867..5609921680791693.7454288-CDS-P-littoralis_Contig83:560867..560992Pylaiella littoralis U1_48CDSP-littoralis_Contig83 560868..560992 -
1680791693.7559521-CDS-P-littoralis_Contig83:561455..5616301680791693.7559521-CDS-P-littoralis_Contig83:561455..561630Pylaiella littoralis U1_48CDSP-littoralis_Contig83 561456..561630 -
1680791693.7682588-CDS-P-littoralis_Contig83:562145..5622261680791693.7682588-CDS-P-littoralis_Contig83:562145..562226Pylaiella littoralis U1_48CDSP-littoralis_Contig83 562146..562226 -
1680791693.7778494-CDS-P-littoralis_Contig83:562646..5627211680791693.7778494-CDS-P-littoralis_Contig83:562646..562721Pylaiella littoralis U1_48CDSP-littoralis_Contig83 562647..562721 -
1680791693.795623-CDS-P-littoralis_Contig83:563684..5637771680791693.795623-CDS-P-littoralis_Contig83:563684..563777Pylaiella littoralis U1_48CDSP-littoralis_Contig83 563685..563777 -
1680791693.806315-CDS-P-littoralis_Contig83:564266..5643641680791693.806315-CDS-P-littoralis_Contig83:564266..564364Pylaiella littoralis U1_48CDSP-littoralis_Contig83 564267..564364 -
1680791693.8180969-CDS-P-littoralis_Contig83:569592..5696891680791693.8180969-CDS-P-littoralis_Contig83:569592..569689Pylaiella littoralis U1_48CDSP-littoralis_Contig83 569593..569689 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig83.134.1

>prot_P-littoralis_Contig83.134.1 ID=prot_P-littoralis_Contig83.134.1|Name=mRNA_P-littoralis_Contig83.134.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=248bp
MRALVTLFLAAAAVPLEAQFGMPPKPKSKPSKGDLPAIKCGVCQALAEHL
HEKVAEMRQEAPFGKVHEDDISTAVEGACDPETKEGRWITQVDIVEEGGY
LELKKPGGFFHCKEECETIAKSCSLLVEEEVDVEELVVALWKNKLGASEL
QKEACGEWSDRCEGKRVKAPKDRKDFELEEKSAKDFAVAEMVEKLQSTMG
GMGGGMGMYGPDDLGAMEEMMAQTGGGGGGGFGDFDPMAGGMDGMEF*
back to top

mRNA from alignment at P-littoralis_Contig83:559424..569689-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig83.134.1 ID=mRNA_P-littoralis_Contig83.134.1|Name=mRNA_P-littoralis_Contig83.134.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10266bp|location=Sequence derived from alignment at P-littoralis_Contig83:559424..569689- (Pylaiella littoralis U1_48)
ATGAGGGCGCTGGTAACGTTGTTTCTCGCGGCTGCGGCCGTGCCACTGGA
AGCGCAGTTTGGCATGCCACCTAAGCCAAAGAGCAAGCCTTCCAAAGGTA
TGATAGTTTGATGGCGTGAAAAAAAAATTCCACGACTAAATATTACCATT
CGCCCTTGCCTGCTGGATCCTTGTGATCCGTCCGCGATCCTCCTGCTTTC
CTTTCTGTGTTGTATATACGATACCGAGGTGTGGCGTGTATGATAGGGTA
TGTCAAACCGGAAGCAGAGCTGGACAAAAGTAAACCGATCTGCAGAGAGC
AAGCCGGGGCTGGCTCGTACAAGGAAGAGCCTGCAGTTGCAGAAGGTTTC
TTTTTTTATGATATGATACCCATCGTGCGTACAAGTACTTGTACCTAAAC
TCTCCGTTCCCTCGCTGCCTAGGCAAGGTCTGCTGTAAACTGACCCAACG
GCGAGTTGGGGGGGTCTTTCTGGCGGGTGTAAGGCCGGACGCACCCTCAA
GGAGTGATACTTTCTTGCTGCTGCGCTGTGGTCGAACGCCACGGGCATGG
CGGTAGAGTTGGGTCGCAGTTGGTGTGCCAAGTGCAAATGTGCGGATTCG
CGGGCCTTTTGGTTACAGCGGCAGTACAACAATGTACATCACAAGCATTT
GTGCGCGGAGGCAGGCGACACCACAGGCGAAAAGACGGTACGATCTAGGA
TGCACAGAGGGATTGTGCCGTCCAGTAACCAGTTTCGCAGCCAAGGACGG
AGGTAGACGAGCAGAGACGAACGGGGAAGAGCTTAGTCGATCTCACTCCG
AGCGTGAACTTTTTTTTCAGAAGACTTGTACCTCAAGTGCACAGTGGAAT
TTTTTAGGGAGCTGATTGGAAAGGAACAACAAGAGAGAGCTGTTATGTGA
GAGAGCGGCGGTGATGGAGGTGACCTGAGGCAACGCCGGCAGTGAAGAAG
CGTTGCGAGAGCATGTTGCTGGTGATGTGGCCTTGGGCAACGCCAACAGC
AACGTGGACCCAGACAAGGAGGGCATGTGTAGGGCGACATCATCACCAGC
GTCGCAAGGACGGCATGGAGACACCATCCTCTACCACATCTGATGATACG
TGTGTTTTTGTGTTTTTTCTTTTTCTGTCTTCTCCGATTGCCGGGGCTAT
ATATGATACTTGTACGTTGCAAGCAGCACTTCAGACAGCAACTAACGGCT
GTAGTCTGCAGCTACCTACTGACTGCTTGTAGCAGCAGGTTACTAGTTAT
AAGTGGGGCGGGAGGAGACTAAACACGATGTTGTAGTCAAATGGACGACG
CTGGAAGTACGTTTGATGTTGGCACTGCTGTGACTACTGTAGTGATGCAC
ACCGCGTAGGAAGGTGTATCTTCTTCGGTCTTTCTTGGTTATTCCCTTGT
AGTTTCTTTCTGTTTTTTGGATCTTCCTAGGGCTCAGCACTGTTTGTGAC
CACGGGCTAGAATTTAGCGATGAGCTAATGTGATAATCAACAACCTATGA
TATGATACATATCGTACGAGAGAGCAGATTTTAGATAGCATCTCATAAAG
TCACACCATGTATCATAGGAGTATCAAATCGGATGTGAGTACAGAAGTCA
CCTTTCATAAAGTTTGGCCAATCAGAAAACTGCGGGCTCCTTTTCTCTCT
CTCTACGGAGCGTGTACGTACGATCATACCGATACCTATGATAGTCGCCT
GGAGTTGGCAAGGTAGATGGTGATTTCGTTAGTTGACATATCTGCGGTAT
AATTACTGTAATTGTTATGATAGTGCAAGATACCACACCCCCACACAGAC
TTTCGAAGCTTACCCGTAATCATGCGAGTCATCGCACCCCCGTGGTAGCT
TTTTTGCATTCCGTATCGCTACATAACCAGGAGAGTGCGAACACCAAACG
ACCCGTCATACGAAAGCTCTCGACGAGATCTTTCCAAAACCACCCTTTTC
GGCAGTGGTACTCTCCTGGTTGTGGAGCAATACGGAATGCAAAAAAGCTA
ACACGGGAGTGCGATGACTCGCATGATTACTAATGATTAAATATAAATAA
ATAAATAAAAACTTCATCTCATGAGTTACGGTGTGATATGATACGAAACA
GATGTATTACTGCTGATGCCGGTCGCCCCGGTGGTTCAGTTGGTAATCCA
CGGAACCTTCTGACATTCACGCGTTAGTTCGAATCCCAGTTCAGTAACAC
GATCTGGGTTTTCTTCTCACAATGCGCGTGGAAATGGAAAGCAATTAATT
CGTGAGTAAACAAAATTCGATCGTACCATCGACGAGGGAAAGGGATCGTT
GTCCCCTTTCTCGCGATAAAAGCTCACCAAAACAAGGCTAGAACCGCAGA
GGGAAGTGGAGAAAAAAAAAAATCCTGTGTTGACTTCCCCCTGTGTGACC
CCAGTTGGAGCGTCGACCTACCCGAAAGGTGCAGAGTGGCGTCCAATTGA
AGGGATGGCAACACACACACTGCTGATGTTCTTTTTTTTGTGGTCGTCCC
TAATCTACCGCACTCCAGATCCTCGTCCAAAGAGAGATACGAATACACAT
ACAGCAGCAGTGTGGGAGTGTGGCAGTGCAGCAGGTGAGCTGATGAGCTG
ATGCTTTCGTGCAAAAAAAAAAATTCAAAGCAGCGGCTAAATTTGCGGCA
TTAACCGGTACTAGTACGTACTGCTGCCGAATGTACTGCTGTAGTAGCAC
CGATACTCCACAGCAGTGGATTCGGTTCTGCCGAATCTCGATGGGCGATC
GACGGGCGTTGGGACCATCTCGTCGAGTCTGGAACCATCTCGTCGAGCTT
GGAACCATCTCGTTGAGCTTGGAACCATCTCGTCGAGCTTGGAACCATCT
CGTCGAGCTTGGAACCATCTCGTCGAGCTTGGAACCAAGCTCGACGAGAT
GGTCAGCAATGGAGTCGGTGCTACCGAATCTCAAAGGGCGATCGACGGGC
GTTGGGACCATCTCGGCGAGTCTGGAACTATCTCGTAGAGCTTGGAACTA
CTGTATCTCGTCTAGCTTGAAACCATCTCGTCGAGCGTGGAACCATCTCG
TCGAGCTTGGAACCAAGCTCGACGAGATGGTCAGCAATAAAGTCGGTGCT
GCCGAATCTCAAAGGGCGATCGACGGGCGTTGGGACCATCTCGTCGAGTC
TGGAACTATCTCGTCGAGCTTGGAACCATCTCGTAGAGTGTCCATCTCGT
CGAGCGTGGAACCATCTCGTCGAGCTTGGAACCATCTCGTTGAGCTTGGA
ACTATCTCACATCGGAACAGGGCACGTACCGGAACACATCACGTAAACAT
ACCCGGAATACTCTGCAAAACACGAAATACATTCCACATAACCCCTCACG
CTCATCCCATCATATGACATCTCCGGAATACTGAAACCGGTACGGCACAC
TCACATGCTGTTACGAGTGTATCAAACATCCTCTCAAGCCATTTTTTGAA
CGACAACGTTGAGTGCCCTGCTGCATGACGCTCAGATATACTTCGAAGCA
TTGATGATATGACATTTATGTGCTCTGCGTATGTGGGGTTCGTGCTGTTA
CCGCACCACGAGGGCACGAACATGGCTTGTGCCATTGTGTGTGTGTCACA
CTCGAGCTCTGGATTTGACGCCTACGTATGATCTGCGGTGTCCTTGCAGA
AGATTTTTGCCAAAGGGCGGGTGGTAGCAAGATGTTGCCTTTGTTAAGTG
GTGCTAGTGGTACACTTAGTGGTGGTGGTGGCGGTGGTGGTACAGCAGTA
GTTTCGTTGCCTTTGCAACACACTGACAACTGTTGTGGCATCTCGGTGAG
GGACGGTCTCCCATGGTGGTCACACAGCAGTACTTCATACTTCATAATCA
CTTGCGACTCTCGCATCATCTCGCACAACAACCACGTGGAACTGGGCGAA
CTGGCGCTGCTGTTGCTGCTACAGTACTGCTGCGGTGTAATCCTACTGGT
CGTTGGAAAAACACTTACGATCTCCGAGAGAAATATGATGCAAACACATG
GTCTGGATAAGACTCAAATTATGAGACAGGTCAATTACTTCATTTAGCAA
TGTGGCGTAGCAGCGCGCGAGAGGGGGGGGGCAGATCTGCGTCCGACCCA
CAGTAACACGCACAATAACAACAACAAAAACAACGGTAGAGAGCAGAGGA
TAGTTTTTGATCCAATGCACGACCGGGCTACAGGTGGACCCATGCTGTGT
GCTCTTGTGCGCAGGATACGATACCCTCAGCAGCAGGAAAGCGTGTACTC
GCAACAATAAGACAGGGTGTGACAATGTGGATAGTGACCTTCACCAAATC
TCCTGTCGAAAATGGCCCCTCTTTTCACAGCCAGCACAGAAATAGTATGA
CATGGTATGACATGATAGTTTTTGTGAAACGTTTGCCTCTGCTTGGAGGA
GGATCCGCCCGGGATAAAAACAAACTACACACATGATAACGGTAGATTAA
GAAAAGTGAGTGGACAAGGCCGTATTGTTGTACGACAAGTGAGGTATCAT
GCTTGGAATTGCGATATTTCGATGTGTCTACGTACTCGTAGCAGTGTTTG
AAAGTCACTGTCACGCAACAAAATACGAGAGCATATTATACAATAGTATG
AATCAGGCCATCAAAAACAGAGCACATGATACGGTTGTTTAATATCTCCC
CTTTGCATGTGCCGGTATAACCACGGCTGTTCGAGCTCCCCAGAGGTTGC
ACAAGGATGCCATATTCCCCGGTCCTCAGCGAGCGGGGCCGATCGATTTT
GAAAGGTCGATCGATTGCTCCGCGACGGAGTGTACGGTACGGTGTACGGG
AGTCCGCCAAGTGATACGAAATTTGCCTGCGTTTGCGTTTTTGGAAAACT
CGACGAGGTGGTTCCAAGTTCCAAGCTCGACGAACTTGATGGATCTATCT
CTCTTCCGGCCCAGCGCCTTCCTAAACCCCAGGCCCAGAGCCACGAACTA
GAGCCCTTACGACAAAACACGGCCCAGTACCCATGGCTTACCACCTCGCA
CAAATTATCCGTTACAGTGGAGGCAAACTCGATTGTGTTCCTCGAGAGAA
AAATGAGAAACGCCAGCAGTGCGAAAGCGATAACGCTACGCAATTTTCCG
AAGACAAGTGCAACGCAGACTTGGTCAATCTACCGCAGCGCAATCCCGCC
ACATGCAGTGGCTGCTGGTGCTGGTACCGCTGTGCGTTCTACTCCACTCG
TGGTCGTGCTTGTGAGAGTTATAACTTTTACGTTTCCGACAAATTGTCCA
CACACGTGTACCAAATACTAGTCTTCCTGTTTCGACTCATGCGTTCCTTC
TCGCCCCTCCCCCCCTCTCTTTCAGGCGATCTACCTGCAATCAAGTGTGG
AGTCTGCCAAGCTCTGGCGGAACACCTGCACGAGAAGGTGGCGGAGATGC
GCCAAGAAGCGCCTTTCGGAAAGGTGTGAACTAGCAAGCCTCACCCATCC
TGATTTACTGGTAGTGGTGGTGTTTGTGGTGTTGGTGGTGCGGTGTGGTT
TTTCCTGGGAGCGATTGTTGTTGCGGTCGTTGTCGTTCGCGTTGCGGATG
GAGCGCGACAGATTTTCATCAAGTTGGACTTCTCAAAGAAGACTTAAAAG
TCGCTTTCCGCCAACGAGAAATTTTCCGTTTTTTGATACCTGACATGCAG
AATCTCGTAGAATCGAAGACCAAGCCGTGCCCTCTCTCGTTTGCACTTGA
TTTACGCATATGATGCCTGGTACTTCGCATACTTTTCTCCAAGCCCCGCC
CGCTCGAACATGAAGCATGAAGAATGAGACGTAAACTTTAAGGTTTCATG
AAAAACGTCAAAGAGAAGACGGACAAGTATACGGGCCCGTTTTTTTGTTT
TCCGCAACCTCTGTCCACTCGAGCAATCATCAACCCTTTTCTTTTGGTTT
AATTCCCAAAAGGTTCACGAGGACGACATCTCGACGGCAGTGGAAGGGGC
TTGCGATCCCGAGACCAAGGAGGGTCGATGGATAACGCAGGTTGACATTG
TCGAGGTAAGAGTTACAAGAGGGAGACGACACACAAACAACAAAAAATAC
CGGTACCTCGAGGCCGCCCACTTCTACATTTCGTGTTCTCAGAAGGCTTA
ATCATATTGGCTACGACGGAATATTAATATTGGTTTCGTTTTCTCTTGCT
GATTCCTGAGCGATCTCTTGTGTTTCGTTTCATTTCATTGTTTGTGTTTT
TCAAAGCATGGTACTGCTACACCACGGTCCGTCCGGCTTCCACCGCAATG
GGCTTTTTTTCGTTATTATTCTAGGTTGTTTGTTGTAGGGACTTTTATTT
TTTATCGCTGCGCGGTGGGTATTTGATGTGACATTTGTGGGAAGGTTCGC
GTGACAAGGCCGATCCGTTTCGATACGACAGCTGAACATGAGTCGTGTCG
AGTGTTGTCCTTTCTCCTACTTTCGGTCTGAGGCTAAGTCGTAGATTTGA
TTCCGGTCGATTCTGTGTTTTGAGGGAGAGGAAGAGGGTCCGTCGGGCTG
GTTTACGCCGAGTGACAAGGTCATGGTGGCGTGAACGGCAGGCAGGCAAG
CCTCCTCCTCTGCGTGTGACTGCGTGGGTGCTGATCTGGGTGCTCGTGTG
CTTGCGTTGACATCTCCTGCAGTGATCACTTTTGTGAACAGAGATATGAT
GGAGAGTGCTCTGTGAACGTTTACGCAAGAGGTATGCCCTTATTCACGCT
TGCTCCGCATTTGTTGCGGTTCCGTCTCATAGAACAACGCCCCACTGCTC
TTGATCGCTCCGCGTAGGCTTCATGTTCTTTTGTTCTAGTCGCTGGCCAA
ACCAGCCCTTGCAGGGGATCACACACCCTTTTCGTATCTCTCGTTCGTTC
ACTGGTTCACTGGGGAGAACAGCAGCGTTTGGGTTCTTGGTAGCCTGTCT
GTGCATTTCTTTGTCTTACTGTCGTGTGTGCGTTGTTTGTTTTTCGCGCT
CTGCTTTTTGCACGGCAGGAAGGAGGATACCTGGAGTTGAAAAAGCCGGG
AGGCTTTTTTCACTGCAAGGAGGAGTGCGAGACCATCGCCAAGGTGCGGC
TGGCCCAGCTGCACCGCGTTTTAAGAGCTAGCTGACCATGTAGCTCTATC
TCATGGTACAGCAACAACTGCCAATCTGTTTCGGGGCGTTGGGTTGAAAA
GGGTTCTGTGCCAGCTTGTTCGAGAACGCAAGAGCTGCTTGTGTTGTACG
ACACGATGCAATGCAAGAAAGAGTAACAAGTCATGCCGCGTCTTCCATGG
CACCGCTGTGTTTGAGCCAGTTTGTATGTACGGCGTGTGCCTTGGCCGAG
ACGAACATGTTTAAGTTACCAACGGCCTCATCCTACGTTGATTTGGTGTG
CCCTCACGCGACCGTCGTTACGCTACTGCTGCTGCTGCTGCTGCTGCTGC
TGCACCTGGTGGTGGTGGGTCCTGGCGCGGGTCTCGGGGTCGGACCGATT
GTGGCAACATCAGAGCTGCTCGTTGCTTGTGGAGGAAGAAGTGGACGTCG
AGGAGCTGGTAGTGGCGCTATGGAAAAACAAGCTGGGAGCGTCGGTGGGT
ACAGCCGTGATGGGATGGGGCATACCACACAGCAGCTTGTTACTTATCGT
CCAAGATAAATACTCGAAAGGGGCTGTAATATGAAATGATGGCTGCCCTT
CACAAAGCATCTACGGCATCAAACTGTCATTAATTCAACCGCCGTCGATC
GCTATTAGCAAGGTCAGTGGGCCGTCGGTTGACCCTGTCTGCTGTCTACT
GTCTGCATATGGCAGCGTGAATCGCCCGTTTCGCTGTGGGGAGGTTTCCG
CTCTAAGTCCCAGCTTGCTGCGCGAAAGAAACATCATCGACCTCCTCCCC
TCATTATCCCTCACTGCACGCGGTGAACACTTGCCTGCACCAGCAGGCAG
TCCTGTGCTCTCTCCCTCTCATGAAACACGCGCTCGTTGGCCTCCTGCTC
CTCCTCCTCGCCTCCCTCTGCCTCTACCCGTGCCCTTTCCTACACCCCTC
CCACCCTCATTGGTGTTGCACTTCCTTTGTTTTACCGGGATCTATCTATC
TTACAACAGGAGCTACAAAAGGAAGCTTGCGGGGAGTGGAGCGATCGTTG
CGAGGGTAAGCGCGTCAAGGCTCCAAAGGACCGCAAAGACTTCGAGTTGG
AGGAAAAGAGCGCCAAGGACTTTGCTGTCGCCGAGATGGTGGAGAAGCTG
CAGAGCACGATGGGCGGGATGGGCGGTGGGATGGGTGAGTACCGTGCTGC
ACATTGGCTTTGGGAGGAGGTGCTTCAATCGAGGATCAGCAGCCAGTTCC
CCATCTGTTCGTAGCCCCCCGCGCGCACCTCGCACCCGAAGCTGCGCCTA
GCCCATGCAACAAGTAATCAGGCGGAGGTTTTGCCGAGGCACGAATTTTT
GTGGTATCATATGACATCATATGATACCATACCGGGTACAAAACTCGCCC
TTGCCGAGTAGCCTGCACGCGCTCCACGCCTCACCGCGGTTCGTGCGGCG
TGATATTACCCGCCCTGGTCGTCGGTCATCGTACTTGTTCGTTCATGTTT
TTGTTCAGGGTCGGGCGCCAAGCGGTCTGTATGCGAATACCGTAGTGCTG
CACACCATGGCCAGCATGATACTGAGCACCCCCCCCCCCCCACCCCCCTC
CGATGAACCGAAACGACAAAAAAACAAAACCCGAACCACCGGCCCAGGCA
TGTACGGTCCGGATGACCTCGGCGCTATGGAGGAGATGATGGCGCAGACG
GGGGGGGGGGGGGGAGGGGGGTTCGGCGACTTCGACCCGATGGCGGGTGG
AATGGATGGCATGGAATTCTGAAAAAGACAGTCAAATAAAATTGAAAAAA
AGAAAAAAAGAAGGATTGAGCGAAAGAAGATGGAATGAATCGAGTCTTGC
CATTAATCCTTGGTGTGCGGATCGGCGGGTGGCGTGAGGGTGGAATATTG
GTATCATACTGACTTGCGTGTCAAAAAAAAACAGGACCTGTACTACTGCT
GCTGTGTGCAAAGTCTATCATACCCGTGTGTAAGCGTGCGGTTGGGGACG
GCGGAGGTCGGGTCGGTTTGTGAATGACTTGGATGGGGGTTAGGCGTGCT
CTTCGCTAGGGATGACATCATGTTTGTGCGGCGCAGTACTGCGCTTGCTG
CTGTTGATGTGCTTGTAGTTTGTCGTGCTTTAATGATGTAGTGCTCGGAG
TTTCCGCGGAGGATTTGATCGTTGGAGTCAAGCAGTGGTCTGCAGATTTT
CATCTCGTGAATGATTTTAGAATTTGCGGTGGGTGCCCTCACCTCTGTTT
CTCGTTGCCAGGACAATTTAAAAAAAAAAAAATCGGCATACTGTAACATC
CAAAAATCCACGAAGGATGATAAGTGATAGTGTAACAGCAATTTTCATGA
CGGCGTCATCGTGCTACGTCGTCGGTGTAGACGTTGGGCTTTTTTTCGTT
GAAGGAACAGTGCTGGGCCAAAAATCGCCCCGAAATTGTCCGCAATAAAT
GCTTCTCGTAGCCTGTGTTTTCCTCAGTCAGTTGGACCGATCGGACCCCG
ACTTTCCGTCAGGCCAAGCGATATTGCGCCGTAGAAACAGAAATAAAACC
CTCGTTAGATGAGAAGAAGCTTTTGCCGCACCCTGTTTAAAGGAAACAGG
CTGGTGGTTGGTGGTCGGTGGTGTCGCGAACTAAAAAACAAGTGGATTGT
TAAACACAGTAAATCTGGGGATTGAGAAGCGGGACTGAATCGAATCGGGG
GGGTAGAGGAACTGGGGGTACCGTACGTGGTAGAAATAATTGAGGGAATT
ACTGGAGCCAGGCACGCTACACAGGAGGGAGATACATACGGTAATGCATA
GCAGTCCAGGGCAAAGCGAAAGAGGAAAGAGTACGGGAAAAGGAAGAGAG
TGGAGTACACAGTGGTACCGGCCCACTCATAGGAAACGACATGTATGTGA
GGAAGGACGGCCGAGAATGTACCGGCTTCGATCTCCTGCCCCAGCATGCC
AGCACATCGTGTATTTTCTCTCTTTCAGGCGAGGTGGTAATGTTCGAGAA
TTTATCACACGCCAACGGGGTCAAGATGACATGATCAATTTAATACAACA
CTTCCGCAATGACATGAAGTGAACAATGAAAGATGACCCTGTTTCCACGC
ACGGGCCGGCGGAGAAATACATGGCGAGGTTCTTGCCATGCTTACTTTTT
AGTGATAACGACATAACAGGGTGCACCCTGGTCATTTTGCGACTCAACAG
GGTGCATACTTTTCCC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig83:559424..569689-

>mRNA_P-littoralis_Contig83.134.1 ID=mRNA_P-littoralis_Contig83.134.1|Name=mRNA_P-littoralis_Contig83.134.1|organism=Pylaiella littoralis U1_48|type=CDS|length=744bp|location=Sequence derived from alignment at P-littoralis_Contig83:559424..569689- (Pylaiella littoralis U1_48)
ATGAGGGCGCTGGTAACGTTGTTTCTCGCGGCTGCGGCCGTGCCACTGGA
AGCGCAGTTTGGCATGCCACCTAAGCCAAAGAGCAAGCCTTCCAAAGGCG
ATCTACCTGCAATCAAGTGTGGAGTCTGCCAAGCTCTGGCGGAACACCTG
CACGAGAAGGTGGCGGAGATGCGCCAAGAAGCGCCTTTCGGAAAGGTTCA
CGAGGACGACATCTCGACGGCAGTGGAAGGGGCTTGCGATCCCGAGACCA
AGGAGGGTCGATGGATAACGCAGGTTGACATTGTCGAGGAAGGAGGATAC
CTGGAGTTGAAAAAGCCGGGAGGCTTTTTTCACTGCAAGGAGGAGTGCGA
GACCATCGCCAAGAGCTGCTCGTTGCTTGTGGAGGAAGAAGTGGACGTCG
AGGAGCTGGTAGTGGCGCTATGGAAAAACAAGCTGGGAGCGTCGGAGCTA
CAAAAGGAAGCTTGCGGGGAGTGGAGCGATCGTTGCGAGGGTAAGCGCGT
CAAGGCTCCAAAGGACCGCAAAGACTTCGAGTTGGAGGAAAAGAGCGCCA
AGGACTTTGCTGTCGCCGAGATGGTGGAGAAGCTGCAGAGCACGATGGGC
GGGATGGGCGGTGGGATGGGCATGTACGGTCCGGATGACCTCGGCGCTAT
GGAGGAGATGATGGCGCAGACGGGGGGGGGGGGGGGAGGGGGGTTCGGCG
ACTTCGACCCGATGGCGGGTGGAATGGATGGCATGGAATTCTGA
back to top