mRNA_P-littoralis_Contig83.110.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig83.110.1
Unique NamemRNA_P-littoralis_Contig83.110.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig83.110.1 vs. uniprot
Match: D8LK10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK10_ECTSI)

HSP 1 Score: 1115 bits (2884), Expect = 0.000e+0
Identity = 546/758 (72.03%), Postives = 621/758 (81.93%), Query Frame = 1
Query:    1 MTGITDALHNARAAVGLGAAESPEKTCATIPRPFPGWQQRLALAPRVESSASALSQGYKMITALRAAACLWGLLLPVTSFGAVGQDKDNGGCINMLTSFKDSLLSTTTVDERSDISLCIAIDQGDPIYTEGKVRGCFSGCGLAGVAVIVLHPGYFGNVCTIWNLLAAHAVTEFKVDFLVLLGDDVVLQTAGWKGEIETAMRETSVGAGLPEGMACVAFRDLTMPAFPCFPVIHRRHVEIFGSVLPPEFINQGGDPFLFELYRRWGASTFADTAALKNLMGGKDSARYPKFGVRWQSEILTRELERFSRLAQPTGARCKCLGVVVPTHRCDVSMLQDIPPWGVTANLCVSGRSGDIWFNQAYPKTGGGEDVDFCLRIRQRFGPDAIVAVPGAVATHPYWNNPIRQMWGWARGDTLCLSFHPHSTFYRVWDWAETTMLIWVVGLVWFNVW---KCLVASGIVWAVEYLEGLAHVYPGTTGVTPWAAVLLAPLPRMVQDAARLLTKLGRLNLYQLLLSFDWMDGTDGHAWRKASRALHATKFAMNVIIILGTALGYGMYCVLLGLAVLAVYWNWQTRRVKGKSVGQSGPARFVVLAWQRTGSNLLCGLLHNHSGVFMHNEIFHDRAIHTYHRDRLAEWGWTVARRDADREAFISTVFSQSDRPEQAIGFKLFPEHVYRDPETMASLLSDPAVKKIVLRRGNAVAAYVSQRRALLTGHFLRVKQPSQVSVHIDPNELQRHLTNYEACYATYSSLLAGQAFHE 2265
            MTGI DALHNARAAVGL A ESPE+TC TIPRP   WQQR AL P VE   +    G    T+       W LLLP+TSFG +G+ +DN  C+ ML  FK SLLSTTT D+RS IS+C+AID GDP+YT+GKV G F+ CGLA V V ++HPG+FGNVCTIWNLLAA AV + K D+LVL+GDDV L+T GWKGEIE +MR  S  AGLP GMACVAFRDLTMPAFP FPVIHRRHVE+FG+VLPPEF+NQGGDPFLFELYRR+GAS FADTA+LKNL+GGK+ ARYPK GVRWQ  ILTRE+ERFSRL +PTG R +CLGVVVPT R  ++ +   PPWGVTANLCVSGRSGDIWF+ AYPKTGGGEDVDFCL+ RQ++G DAIVAVPGA ATHPYW NPIRQ+WGWARGD LCLSFHPHSTFYR  DWAET +LIW+V  V  N+W   +CL ASG+V  VE+LEGLAHVYPGTTG  PW+AVLLAP+P MVQD ARL+TKL + NLYQLLLSFDWMDGTDGH WR ASR LHA K + N++I +  ALGYG++C L+ +A L + + WQT   + K+  Q  PARFVVLAWQRTGSNLLCGLLHNHSGVFMHNEIFH+RAIHTYH+DRL +W WTVARRDAD   FIS V+++SDRPEQAIGFKLFPEH+YRDPETMASLL+D  VKKIVLRRGNAVAAYVSQRRALLTG FL+V+QP  VS+ IDP+ELQ HL NYE+CYATYS LLAGQAFHE
Sbjct:    1 MTGIADALHNARAAVGLNAVESPEETCRTIPRPCSAWQQRQALVPNVEVR-NTFEPGDVTATSP------WALLLPITSFG-IGE-QDNAKCMRMLERFKGSLLSTTTADDRSAISICVAIDDGDPVYTKGKVVGFFNDCGLARVQVTMVHPGFFGNVCTIWNLLAAKAVEDCKADYLVLVGDDVELETPGWKGEIEASMRNVSEAAGLPLGMACVAFRDLTMPAFPSFPVIHRRHVEVFGAVLPPEFVNQGGDPFLFELYRRFGASAFADTASLKNLVGGKEEARYPKVGVRWQGAILTREIERFSRLVRPTGPRFRCLGVVVPTFR--IAKVVAYPPWGVTANLCVSGRSGDIWFSPAYPKTGGGEDVDFCLKTRQKYGRDAIVAVPGAAATHPYWANPIRQVWGWARGDALCLSFHPHSTFYRAPDWAETIVLIWLVFGV-ANIWSVTQCLTASGVVGTVEFLEGLAHVYPGTTGAEPWSAVLLAPIPSMVQDVARLVTKLAQGNLYQLLLSFDWMDGTDGHKWRTASRVLHAAKISGNLLIGVSAALGYGLHCSLVVVAGLVMPFRWQTPGARRKATNQRAPARFVVLAWQRTGSNLLCGLLHNHSGVFMHNEIFHNRAIHTYHQDRLEKWEWTVARRDADPRRFISEVWARSDRPEQAIGFKLFPEHIYRDPETMASLLADATVKKIVLRRGNAVAAYVSQRRALLTGQFLQVQQPGNVSIRIDPDELQDHLANYESCYATYSRLLAGQAFHE 746          
BLAST of mRNA_P-littoralis_Contig83.110.1 vs. uniprot
Match: A0A6H5JC82_9PHAE (Glyco_trans_2-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC82_9PHAE)

HSP 1 Score: 731 bits (1886), Expect = 2.320e-253
Identity = 420/845 (49.70%), Postives = 486/845 (57.51%), Query Frame = 1
Query:    1 MTGITDALHNARAAVGLGAAESPEKTCATIPRPFPGWQQRLALAPRVESSASALSQGYKMITALRAAACLWGLLLPVTSFGAVGQDKDNGGCINMLTSFKDSLLSTTTVDERSDISLCIAIDQGDPIYTEGKVRGCFSGCGLAGVAVIVLHPGYFGNVCTIWNLLAAHAVTEFKVDFLVLLGDDVVLQTAGWKGEIETAMRETSVGAGLPEGMACVAFRDLTMPAFPCFPVIHRRHVEIFGSVLPPEFINQGGDPFLFELYRRWGASTFAD-TAALKNLMGGKDSARYPKFGVRWQSEILTRELERFSRLAQPTGARCKCLGVVVPTHRCDVSMLQDI--------------------------------------------------------------------------------------PPWGVTANLCVSGRSGDIWFNQAYPKTGGGEDVDFCLRIRQRFGPDAIVAVPGAVATHPYWNNPIRQMWGWARGDTLCLSFHPHSTFYRVWDWAETTMLIWVVGLVWFNVW---KCLVASGIVWAVEYLEGLAHVYPGTTGVTPWAAVLLAPLPRMVQDAARLLTKLGRLNLYQLLLSFDWMDGTDGHAWRKASRALHATKFAMNVIIILGTALGYGMYCVLLGLAVLAVYWNWQTRRVKGKSVGQSGPARFVVLAWQRTGSNLLCGLLHNHSGVFMHNEIFHDRAIHTYHRDRLAEWGWTVARRDADREAFISTVFSQSDRPEQAIGFKLFPEHVYRDPETMASLLSDPAVKKIVLRRGNAVAAYVSQRRALLTGHFLRVKQPSQVSVHIDPNELQRHLTNYEACYATYSSLLAGQAFHE 2265
            MTGITDALH+ARAAVGL   ESPE+TC  IPRP   WQQR AL P VE   +             +    W LLLP+TSFG  GQD  N  C++ML  FK SLLSTTT D+RS IS+C+AID+ DP+YT  K                                                             GE+E  MR+ S  AGLP GMA +AFRDLT+PAF  FP                                   AST    +A+LKNL  GK+ ARYPK GVRWQ+ ILTRE+ RFSRL +PTG   + LGVVVPT RC+VSML++I                                                                                      PPWGVTAN CVSGRSGDIWF+ AYPKTG GEDVDFCL+  QR+G DAIVAVPGA AT   W NPIRQ+WGWARGD  C+SFH HST +       T +LIW+V  V  N+W   KCL ASG+V  +E+LEGLAHVY GTTG  PW+AVLLAP+P M              NLYQLLL FDWMDG +GH WRKASR LHA K A N++I++G ALGYG++     LAV+A                Q  PAR VVLAWQRTG NLLCGLLHNHSGVF+HNEIFH+RAIHT+H+DRL +WGW VA RDAD   FIS V+++SDRP+QAIG KLFPEH+YRDP+TMA LL+D   KKIVLRRGNAV AYVSQRRALLTG FL+V+QP  VS+ IDP+ELQ HL NY++CYA Y  LLAGQAFHE
Sbjct:    1 MTGITDALHDARAAVGLNPVESPEETCRPIPRPCSAWQQRQALVPNVEVRKTFEPGDVTAAATSMSPRAAWALLLPITSFGIGGQD--NAKCMSMLGRFKGSLLSTTTADDRSAISICVAIDEDDPVYTMTK-------------------------------------------------------------GEVEAFMRDVSETAGLPLGMASMAFRDLTIPAFSSFP-----------------------------------ASTAVTWSASLKNL--GKEEARYPKVGVRWQAAILTREIGRFSRLVRPTGLCLRSLGVVVPTFRCEVSMLREIVSLESTAYPNVVEEVNALTSYAKHHVVRIFINKENLGASKSRNIGLSQAFSDHVLLLDDDVVPERHILHAYRGGIDRFPIAKVVAYPPWGVTANPCVSGRSGDIWFSPAYPKTGDGEDVDFCLKTSQRYGRDAIVAVPGAAATLSCWANPIRQVWGWARGDARCVSFHRHSTIF-----CATIVLIWLVFGV-ANIWSVRKCLTASGVVETLEFLEGLAHVYRGTTGAEPWSAVLLAPMPSMG-------------NLYQLLLPFDWMDGKEGHKWRKASRVLHAAKLATNLLIVVGAALGYGLHR---SLAVVAA--------------NQRAPARLVVLAWQRTGRNLLCGLLHNHSGVFIHNEIFHNRAIHTFHQDRLEKWGWAVAHRDADTRRFISEVWTRSDRPDQAIGSKLFPEHIYRDPDTMAPLLADHTAKKIVLRRGNAVGAYVSQRRALLTGQFLQVQQPGNVSIRIDPDELQDHLANYKSCYAIYPRLLAGQAFHE 709          
BLAST of mRNA_P-littoralis_Contig83.110.1 vs. uniprot
Match: A0A813JGE0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JGE0_POLGL)

HSP 1 Score: 284 bits (727), Expect = 1.360e-82
Identity = 180/501 (35.93%), Postives = 227/501 (45.31%), Query Frame = 1
Query:  205 CLWGLLLPVTSFGAVGQDKDNGGCINMLTSFKDSLLSTTTVDERSDISLCIAIDQGDPIYTEGK----VRGCFSGCGLAGVAVIVLHPGYFGNVCTIWNLLAAHAVTEFKVDFLVLLGDDVVLQTAGWKGEIETAMRETSVGAGLPEGMACVAFRDLTMPAFPCFPVIHRRHVEIFGSVLPPEFINQGGDPFLFELYRRWGASTFADTAALKNLMGGKDSARYPKFG--VRWQSEILTRELERFS-----RLAQPTG-ARCKCLGVVVPTHRCDVSMLQDI-------------------------------------------------------------------------------------------------------------------------------------PPWGVTANLCVSGRS-GDIWFNQAYPKTGGGEDVDFCLRIRQRFGP--DAIVAVPGAVATHPYWNNPIRQMWGWARGDTLCLSFHPH 1263
            C WGLL+P+ S  +  +D     C   LT F+DSL  T +  E   + + + ID GD +Y   K    +RG F   GL  V   +   GY G +C IW+ +A  AV +   DF VL GDD+ L+T GWK EIE      S    LP G+ACVAFRD   P FP FPV+HR H+EIF  + P EFINQ GDP+LFE+YRRWGAS FA TAAL N +GG D ARY K G  + W+  +LT  +E  S     +L    G AR  C+ +V PT+RCDVS L++I                                                                                                                                     PPWGVTANLCV GR+  D+WF+  +PKTGGGED+D+CLR +        A+VAVPGAV  HP+W N ++Q+ GWA GD  CL   PH
Sbjct:   79 CKWGLLVPICSRSSSEED-----CFKKLTQFRDSLQRTCS--ETQHLMVHLGIDHGDTVYDTPKAKERLRGMFGDVGLP-VEFHMFTAGYRGRLCWIWDRMAQAAVNKHAADFFVLFGDDIELRTEGWKQEIEQQFVAISKRYNLPFGIACVAFRDEAFPVFPTFPVLHRLHLEIFKRLFPKEFINQHGDPYLFEIYRRWGASEFAVTAALCNTVGGADDARYSKCGTGLPWRDSLLTTAIETLSAWLQVKLGTEHGRARFTCIDIVCPTYRCDVSRLKNISMLCASPEYKVSTQILFVVDKPDSSNLAQVKALEQWTANKHVRVYVNPQNLGASEARNAGHAQSFGDYVVFIDDDVVPEATLLDAYFGAVKRHPKARFWVGATKLPAPQTLMQHALAACRMTFFYDVAERMPNPPWGVTANLCVRGRTQNDVWFSNIFPKTGGGEDIDYCLRQKPSSTDRDSAVVAVPGAVVHHPFWTNILKQVAGWAAGDVKCLETLPH 571          
BLAST of mRNA_P-littoralis_Contig83.110.1 vs. uniprot
Match: A0A7S3V5E6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5E6_9STRA)

HSP 1 Score: 250 bits (638), Expect = 8.320e-71
Identity = 165/451 (36.59%), Postives = 230/451 (51.00%), Query Frame = 1
Query:  991 VSMLQDIPPWGVTANLCVSGRSGDIWFNQAYPKTGGGEDVDFCLRIRQRFGPDAIVAVPGAVATHPYWNNPIRQMWGWARGDTLCLSFHPHSTFYRVWDWAE---TTMLIWVVGLVWFNVWKCLVASGIVWAVEYLEGLAHVYPGTTGVTPWAAVLL----APLPRMVQDAARLLTKLGRLNLYQLLLSFDWMDGTDGHAWRKASRALHATKFAMNVIIILGTALGYGMYCVLLGLAVLAVYW--NWQTRRVKGKSVGQSGPAR-----------FVVLAWQRTGSNLLCGLLHNHSGVFMHNEIFHDRAIHTYHRDRLAEWGWTVARRDADREAFISTVFSQSDRPE-------QAIGFKLFPEHVYRDP---ETMASLLSDPAVKKIVLRRGNAVAAYVSQRRALLTGHFLRVKQPSQVSVHIDPNELQRHLTNYEACYATYSSLLAGQ 2253
            V++ Q  PPWGVTAN+C+  R   + F++ +PKTGGGEDVDFC+R +Q FG    VAVPGA   HPYW+ P++Q+ GWA GD LCL   P STF    +W E    T+L+    L    ++           +E L  +      T+        LL    A +P M+QD  RL +KL RL L    L FDWM+ T  H   +   A+ +   A  +  +   A G       +  ++    W  N    R+  + +    P             FVV A+QRTGSNLLC +L  H+ + MH EIF+D+AI  Y  D +      + RRD+    F+S ++S  +R +        AIGFK+FPEH+ R     E    +LSD  V+KI+L R N +AA VS  RA +TG ++R K    V VH++P  LQ  + NY+  Y+     LAGQ
Sbjct:    1 VALHQRHPPWGVTANICIPARMNPVSFDRRFPKTGGGEDVDFCIRSQQHFG--KCVAVPGACVLHPYWDRPLKQISGWADGDVLCLETLPLSTFRAPPNWIEIAFVTILLRRPDLTLLAIF-----------IEVLMLVPRFLSNTSSRESLRQRLLVATVAVIPPMLQDIRRLRSKLVRLRLSHFCLHFDWMNKTGNHTTER-QLAIFSRTLAFGLAAVALEAEGLKRTAAFICFSLFCFIWCINQADLRIIPQILKSPRPFNPELGIGDTSVPFVVFAFQRTGSNLLCNILGQHNQIAMHYEIFNDKAI--YAHDGVVNTDDAIKRRDSSPSDFLSDMYSIKERAKVLGGGKPHAIGFKVFPEHICRSARSRELFEEILSDTRVRKIILHRRNRLAACVSALRASVTGQYIR-KNLDHVRVHLEPEGLQGFIDNYDCYYSYIRERLAGQ 434          
BLAST of mRNA_P-littoralis_Contig83.110.1 vs. uniprot
Match: A0A8J6C8R3_DIALT (Glyco_trans_2-like domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C8R3_DIALT)

HSP 1 Score: 192 bits (488), Expect = 1.370e-49
Identity = 113/275 (41.09%), Postives = 156/275 (56.73%), Query Frame = 1
Query:  211 WGLLLPVTSFGAVGQDKDNGGCINMLTSFKDSLLSTTTVDERSDISLCIAIDQGDPIYT--EGKVRGCFSGCGLAGVAVIVLHPGYFGNVCTIWNLLAAHAVTEF-KVDFLVLLGDDVVLQTAGWKGEIETAMRETSVGAGLPEGMACVAFRDLTMPAFPCFPVIHRRHVEIFGSVL-PPEFINQGGDPFLFELYRRWGASTFADTAALKNLMGGKDSARYPKFGVRWQSEILTRELERFSR-LAQP---TGARCKCLGVVVPTHRCDVSMLQDI 1011
            W +LLP+TS G+     D   C   L +   +L+ST    +R+   + +AID  D +    E +VR      GL  VA  VL P +   +C IW  LA  AV E  + D LVLLGDDVV+    W+ ++E +    +   GLP G+ CVA RD++  +FP FPV+HR H++IFG  L   E  NQ GDP+LFELYRRWGA+ F   A L N  GG  ++RY K  V W+  +LTR +E   R LA+     G R  C+ ++VPT+RCD + L+ +
Sbjct:   99 WAVLLPITSRGS-----DGATCWPALRTMASTLISTIPPTKRALTRVHVAIDMKDVVNDTDEARVRIAALFAGLP-VAFHVLPPAFTAKLCWIWEQLALAAVAEAERADLLVLLGDDVVMLDDDWQEDVEASFARVAQQTGLPFGVGCVAIRDVSFESFPMFPVVHRDHLQIFGGRLFLRELTNQHGDPYLFELYRRWGAARFTSRARLVNGRGGSAASRYEKASVAWRDVLLTRGIETIERWLAERHGIDGRRVPCVDIIVPTYRCDEAALEAV 367          
BLAST of mRNA_P-littoralis_Contig83.110.1 vs. uniprot
Match: A0A7S1ZTD6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZTD6_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.510e-49
Identity = 100/239 (41.84%), Postives = 135/239 (56.49%), Query Frame = 1
Query:  274 CINMLTSFKDSLLSTTTVDERSDISLCIAIDQGDPIYTEGKVRGCFSGCGLAGVAVIVLHPGYFGNVCTIWNLLAAHAVTEFKVDFLVLLGDDVVLQTAGWKGEIETAMRETSVGAGLPEGMACVAFRDLTMPAFPCFPVIHRRHVEIFGSVLPPEFINQGGDPFLFELYRRWGASTFADTAALKNLMGGKDSARYPKFGVRWQSEILTRELERFSR--LAQPTGARCKCLGVVVPTHR 984
            C + L +F  S  +TTT  ++S I   I ID+ D ++     +          V  I++ P  +G VC IWN LA  A    K DF+VLLGDD++L   GWK  IE    E +   GLP G  CVA  DL+   FP FPVIH+ H++ F  +LP +F+NQGGDPFL+ELY R  AS+F   A LKN +GG DSARY K  + W+  +L  +L+        +P G    CL +VVP++R
Sbjct:  122 CWDRLENFVASFRATTTKYDQSQIEFIIGIDEDDHVFNTQSAKERIEEIIPCMVRFILIRPQLYGKVCKIWNRLAQEA----KHDFIVLLGDDIILLDNGWKQLIELRFEEIADATGLPYGTGCVALTDLSFQGFPTFPVIHQTHLKTFNRLLPRQFVNQGGDPFLYELYSRHNASSFVAAARLKNTLGGDDSARYLKHDINWKGIVLRVQLQHLQNHLKKRPEGV---CLDIVVPSYR 353          
BLAST of mRNA_P-littoralis_Contig83.110.1 vs. uniprot
Match: A0A0D2JWK4_9CHLO (Glyco_trans_2-like domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JWK4_9CHLO)

HSP 1 Score: 191 bits (484), Expect = 7.370e-49
Identity = 127/348 (36.49%), Postives = 174/348 (50.00%), Query Frame = 1
Query:  919 SRLAQPTGARCKCLGVVVPTHRCDVSMLQDIPPWGVTANLCVSGRSGD-IWFNQAYPKTGGGEDVDFCLRIRQRFGPD--AIVAVPGAVATHPYWNNPIRQMWGWARGDTLCLSFHPHSTFYRVWDWAETTMLIWVVGLVWF----------NVWKCLV----ASGIVWAVEYLEGLAHVYPGTT-GVTP---WAAVLLAPLPRMVQDAARLLTKLGRLNLYQLLLSFDWMDGTDGHAWRKASRALHATKFAMNV----------IIILGTALGYGMYCVLLGLAVLAVYWNWQTRRVKGKSV--------------GQSGPARFVVLAWQRTGSNLLCGLLHNHSGV 1827
            ++L +P   +   L     T    ++  +  PPWGVTANLCV GRS + +WF+ AYPKTGGGEDV+FCLR++        AIVAVP A A HP+W   +RQ+ GWA GD LCL   PHSTF  + +WAE T+L+ V   +               + LV     +  + AVE   G+  V P     + P       +LA +P +VQD  RL  KL RL   Q+ L FDWMDG   H        + AT+F + V           ++  + L  G   +       AV    +++R+  + +               + GP  FVVLA+QRTG+NLLCG+LHNH  V
Sbjct:  197 TQLPEPHSMQQHALVASQMTFFFSIAAREPNPPWGVTANLCVPGRSNNTVWFSGAYPKTGGGEDVEFCLRLKALAADKDAAIVAVPEARALHPFWGGVLRQVAGWASGDVLCLEALPHSTFRALPNWAEATLLLPVAAAIGAPPLSGALDGCGTMERLVLLAACAAAIMAVELTLGVVSVLPRVPPALAPPRRMVIAVLALVPALVQDVVRLRCKLARLRFTQICLCFDWMDGQRDH--------VAATQFGLLVRNVCWAVAVCCVLFWSRLSAGTLALAASFLTAAVLLFARSQRINHRRLFCRDYLSALRPLPLPEDGPVPFVVLAYQRTGTNLLCGMLHNHPEV 536          
BLAST of mRNA_P-littoralis_Contig83.110.1 vs. uniprot
Match: A0A1Z5KLG5_FISSO (Glyco_trans_2-like domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLG5_FISSO)

HSP 1 Score: 190 bits (483), Expect = 7.460e-47
Identity = 109/279 (39.07%), Postives = 154/279 (55.20%), Query Frame = 1
Query:  211 WGLLLPVTSFGAVGQDKDNGGCINMLTSFKDSLLSTTTVDERSDISLCIAIDQGDPIYTEGKVRGCFSGCGLAGVAVIVLHPGYFGNVCTIWNLLAAHAVTEFKVDFLVLLGDDVVLQTAGWKGEIETAMRETSVGAGLPEGMACVAFRDLTMPAFPCFPVIHRRHVEIFGSVLPPEFINQGGDPFLFELYRRWGASTFADTAALKNLMGGKDSARYPKFGVRWQSEILT-----------RELERFSRLAQPTGARCK-CLGVVVPTHRCDVSMLQDI 1011
            W LL+PV S    G+++    C   L     S+L+T+     + + L    D  D ++    +R  F    +     + +  G  G +C IW LLAA A  +    F  LLGDDVV+QT+ W+ +IE+     +    LP G ACVAF D +   FP FPVIH+ H E FGSVLPP F NQGGDPFLFELY+R GAS FA   +L N +GGK +ARY K  +R++ ++L+             +E  +++ +P   + + CL VVVPT+RCD+  L+ I
Sbjct:  323 WALLIPVRS----GRNESIHECAGRLKRMYMSILTTSRPALHAPLLLFGVDDDDDALFNGDLIRSIFKDLPVQ----VEVFSGLQGKICKIWGLLAALAYEKHGAHFTCLLGDDVVIQTSRWQEKIESEFNAIARDESLPLGAACVAFVDESFRGFPSFPVIHKWHFETFGSVLPPSFTNQGGDPFLFELYKRLGASRFALDCSLVNTIGGKHTARYTKQSLRFEGDMLSSAISSLLKAIDNSVENGTKIQRPLSLKPRMCLDVVVPTYRCDIQKLRTI 593          
BLAST of mRNA_P-littoralis_Contig83.110.1 vs. uniprot
Match: K0SDM1_THAOC (RING-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SDM1_THAOC)

HSP 1 Score: 185 bits (470), Expect = 5.000e-45
Identity = 117/290 (40.34%), Postives = 151/290 (52.07%), Query Frame = 1
Query:  211 WGLLLPVTSFGAVGQDKDNGGCINMLTSFKDSLLSTTTVD-ERSDISLCIAIDQGDPIY----TEGKVRGCFSGCGLAGVAVIVLHPGYFGNVCTIWNLLAAHAVTEFKVDFLVLLGDDVVLQTAGWKGEIETAMRETSVGAGLPEGMACVAFRDLTMPAFPCFPVIHRRHVEIFGSVLPPEFINQGGDPFLFELYRRWGASTFADTAALKNLMGGKDSARYPKFGVRWQSEILTREL----------------ERFSRLAQPT--GARCKCLGVVVPTHRCDVSMLQDI 1011
            WG+LLP+ S G    + D   C + +     +L+ T  V  ER+ + +   ID GD ++    +E ++       GL     +VLH    G +C IWN LA  A      +FLVLLGDDV L+TAGWK  IE    + +    LP G ACVAF D+    FP FPV+H+ H+     + P   INQGGDPFLFELY+RWGAS F     L+N +GG D ARY K  +RW  E LT  +                E+ SR A  T  G R  C+ VVVPT R DV +L  I
Sbjct:  190 WGILLPICSRG---DEADPEKCFSAIDGLFSTLVDTVPVKRERACLEVHFGIDGGDIVFDSPASEARLTTMAEKAGLGKSHFMVLHD-LEGKICHIWNCLAQEAHRN-GCEFLVLLGDDVRLKTAGWKKGIERRFWDIASKRQLPFGFACVAFNDVNFRNFPTFPVVHKEHLARCRRLFPRRLINQGGDPFLFELYKRWGASEFCFEHELENTIGGMDEARYTKRTIRWNGEQLTTYIDKLEGNDAAVNENQVEEKSSRPAALTDKGKRVPCVDVVVPTFRLDVEILSRI 474          
BLAST of mRNA_P-littoralis_Contig83.110.1 vs. uniprot
Match: A0A7S2PWB1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PWB1_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.360e-44
Identity = 92/243 (37.86%), Postives = 129/243 (53.09%), Query Frame = 1
Query:  256 DKDNGGCINMLTSFKDSLLSTTTVDERSDISLCIAIDQGDPIYTEGKVRGCFSGCGLAGVAVIVLHPGYFGNVCTIWNLLAAHAVTEFKVDFLVLLGDDVVLQTAGWKGEIETAMRETSVGAGLPEGMACVAFRDLTMPAFPCFPVIHRRHVEIFGSVLPPEFINQGGDPFLFELYRRWGASTFADTAALKNLMGGKDSARYPKFGVRWQSEILTRELERFSRLAQPTGARCKCLGVVVPTHR 984
            D  +  C ++L+ F  SL  T    +  +    + ID GD +Y   K R          V  + + P  +G +C IWN    H  ++   D++VL GDDV L   GW  +IE   R  S   GLP G ACVA  DL+ P FP FPVIHR H+  F ++LP +F+NQGGDPFL+ELY R+  S +  +  LKN +GG   ARY K+ + W+  IL   + +  +  +       CL VVVP++R
Sbjct:  196 DSFDEACWDLLSGFCKSLKETVPPSQMENFECVVGIDVGDKVYQPAKER--LKAMIPCNVVFVDIQPTMYGKLCRIWN----HLASKSHNDYIVLFGDDVRLLDCGWPQKIEECFRNISTNTGLPLGAACVAMNDLSFPGFPTFPVIHRWHLNQFVTLLPKQFVNQGGDPFLYELYSRFKTSAWEVSCRLKNTIGGDGDARYQKYHINWRGHILNMHIRKLKKSVEVRNISGVCLDVVVPSYR 432          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig83.110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK10_ECTSI0.000e+072.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC82_9PHAE2.320e-25349.70Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A813JGE0_POLGL1.360e-8235.93Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S3V5E6_9STRA8.320e-7136.59Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A8J6C8R3_DIALT1.370e-4941.09Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A7S1ZTD6_9STRA1.510e-4941.84Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A0D2JWK4_9CHLO7.370e-4936.49Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A1Z5KLG5_FISSO7.460e-4739.07Glyco_trans_2-like domain-containing protein n=1 T... [more]
K0SDM1_THAOC5.000e-4540.34RING-type domain-containing protein n=1 Tax=Thalas... [more]
A0A7S2PWB1_9STRA1.360e-4437.86Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig83contigP-littoralis_Contig83:476125..478788 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LK10
PFAMsGlycos_transf_2
Model size2265
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue0.0
EggNOG OGs2CXN1@1|root,2RYKE@2759|Eukaryota
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-06_007740.1
DescriptionGlycosyl transferase family 2
Cds size2265
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791693.1375468-CDS-P-littoralis_Contig83:476124..4771351680791693.1375468-CDS-P-littoralis_Contig83:476124..477135Pylaiella littoralis U1_48CDSP-littoralis_Contig83 476125..477135 +
1680791693.148327-CDS-P-littoralis_Contig83:477534..4787881680791693.148327-CDS-P-littoralis_Contig83:477534..478788Pylaiella littoralis U1_48CDSP-littoralis_Contig83 477535..478788 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig83.110.1prot_P-littoralis_Contig83.110.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig83 476125..478788 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig83.110.1

>prot_P-littoralis_Contig83.110.1 ID=prot_P-littoralis_Contig83.110.1|Name=mRNA_P-littoralis_Contig83.110.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=755bp
MTGITDALHNARAAVGLGAAESPEKTCATIPRPFPGWQQRLALAPRVESS
ASALSQGYKMITALRAAACLWGLLLPVTSFGAVGQDKDNGGCINMLTSFK
DSLLSTTTVDERSDISLCIAIDQGDPIYTEGKVRGCFSGCGLAGVAVIVL
HPGYFGNVCTIWNLLAAHAVTEFKVDFLVLLGDDVVLQTAGWKGEIETAM
RETSVGAGLPEGMACVAFRDLTMPAFPCFPVIHRRHVEIFGSVLPPEFIN
QGGDPFLFELYRRWGASTFADTAALKNLMGGKDSARYPKFGVRWQSEILT
RELERFSRLAQPTGARCKCLGVVVPTHRCDVSMLQDIPPWGVTANLCVSG
RSGDIWFNQAYPKTGGGEDVDFCLRIRQRFGPDAIVAVPGAVATHPYWNN
PIRQMWGWARGDTLCLSFHPHSTFYRVWDWAETTMLIWVVGLVWFNVWKC
LVASGIVWAVEYLEGLAHVYPGTTGVTPWAAVLLAPLPRMVQDAARLLTK
LGRLNLYQLLLSFDWMDGTDGHAWRKASRALHATKFAMNVIIILGTALGY
GMYCVLLGLAVLAVYWNWQTRRVKGKSVGQSGPARFVVLAWQRTGSNLLC
GLLHNHSGVFMHNEIFHDRAIHTYHRDRLAEWGWTVARRDADREAFISTV
FSQSDRPEQAIGFKLFPEHVYRDPETMASLLSDPAVKKIVLRRGNAVAAY
VSQRRALLTGHFLRVKQPSQVSVHIDPNELQRHLTNYEACYATYSSLLAG
QAFHE
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mRNA from alignment at P-littoralis_Contig83:476125..478788+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig83.110.1 ID=mRNA_P-littoralis_Contig83.110.1|Name=mRNA_P-littoralis_Contig83.110.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2664bp|location=Sequence derived from alignment at P-littoralis_Contig83:476125..478788+ (Pylaiella littoralis U1_48)
ATGACGGGCATTACCGATGCTCTTCACAATGCGAGAGCGGCCGTTGGTTT GGGAGCAGCTGAATCTCCCGAGAAGACCTGCGCCACGATCCCACGGCCTT TTCCTGGATGGCAGCAGCGACTTGCTCTTGCGCCACGAGTGGAATCGTCA GCTTCTGCCTTGAGCCAGGGATACAAAATGATCACCGCTCTTAGGGCTGC CGCATGTCTTTGGGGGCTCCTGCTGCCCGTCACCTCCTTCGGCGCCGTTG GACAGGACAAGGACAACGGTGGGTGCATAAACATGCTCACAAGCTTTAAA GACTCACTCCTGAGCACCACCACTGTAGATGAACGCAGCGACATTTCCCT CTGCATCGCTATCGACCAAGGCGACCCCATCTATACCGAAGGCAAGGTGC GCGGATGCTTCAGCGGGTGTGGCCTCGCAGGCGTAGCCGTAATAGTTCTC CACCCCGGGTATTTCGGCAACGTTTGCACCATCTGGAACCTTCTTGCAGC CCACGCCGTCACAGAATTCAAGGTCGACTTCCTGGTCCTCCTGGGTGATG ATGTGGTGCTACAAACCGCAGGATGGAAGGGCGAGATCGAGACGGCCATG CGCGAAACATCTGTGGGTGCCGGGCTGCCCGAAGGGATGGCTTGTGTGGC TTTTCGCGACCTCACTATGCCTGCATTTCCCTGCTTCCCGGTCATCCATC GCCGTCACGTTGAGATCTTCGGCTCGGTTTTGCCGCCTGAGTTCATCAAC CAGGGTGGAGATCCCTTCCTCTTCGAGCTGTACCGCCGCTGGGGCGCTTC TACCTTCGCGGACACCGCTGCGCTGAAGAACCTCATGGGCGGCAAAGACT CGGCCCGGTACCCGAAGTTTGGTGTCCGCTGGCAATCCGAGATTCTCACA AGAGAGCTCGAACGCTTCTCACGCCTGGCGCAACCGACGGGAGCTCGCTG CAAGTGCTTGGGCGTGGTAGTGCCCACGCACAGGTGCGACGTTTCCATGC TGCAGGACATCGTTTCGCTCAAGTCCACGGCCTACCCTGACGTCTCCGTG CAGATCATCGTGGTGGTGGACCGCCCCGATGCGGAAAACTTGGAAGAGGT GATAGCCTTGACGTCGTACGCGAAGGACCATGTCGTGAGAGTCTTCGTGA ACGAGAAAAACATCGGGGCAAGTGAGAGCCGCAACATTGGGCTGTCGCAA GCCTTTTCGGACCATGTGGTGCTTCTCGACGATGACGTTGTGCCGGAGCG CTATATCCTGGACGCCTACCTCGGCGGGATTGAACGCTATCCTGACGCGC GCGTGTGGGTGGGGTGCACGGAGTTCCCTCCTGCCAAGACTACTGTGGAA CACGCGGTGCGTGCATCTAACCTGTGCCACTTCTATGGGATCGCCAAAGT CGTCTCTCAGCCGCCATGGGGCGTCACGGCCAATCTGTGTGTGAGCGGGC GCTCAGGGGACATCTGGTTCAACCAAGCCTACCCCAAGACCGGAGGTGGT GAAGATGTTGACTTCTGCCTAAGGATTAGGCAGCGTTTTGGACCCGACGC TATCGTGGCGGTGCCTGGAGCTGTGGCCACGCACCCCTACTGGAACAACC CTATCCGCCAGATGTGGGGCTGGGCTCGTGGGGACACGCTCTGTCTCAGT TTTCACCCGCACTCCACCTTCTATCGCGTCTGGGACTGGGCGGAGACAAC GATGCTGATATGGGTGGTCGGCCTTGTGTGGTTCAATGTCTGGAAATGCC TTGTGGCATCCGGCATTGTCTGGGCTGTGGAATACCTCGAGGGACTTGCC CACGTGTACCCAGGGACCACTGGGGTCACGCCCTGGGCTGCGGTGCTTCT TGCGCCCTTGCCAAGAATGGTGCAGGATGCCGCTCGTCTCTTGACCAAGC TGGGACGGCTCAACCTTTACCAGCTCCTCCTGAGCTTTGACTGGATGGAT GGGACAGACGGGCACGCTTGGCGTAAGGCTTCAAGGGCACTCCACGCCAC CAAGTTCGCTATGAACGTTATCATTATTCTTGGCACTGCACTGGGATACG GCATGTATTGCGTACTCTTGGGTCTGGCAGTTCTGGCGGTGTACTGGAAC TGGCAGACCCGTCGTGTCAAGGGCAAGTCAGTCGGCCAGAGCGGCCCGGC TCGGTTCGTCGTGCTGGCCTGGCAGCGCACCGGAAGCAACCTCCTTTGCG GCCTGCTGCACAATCACTCTGGCGTGTTCATGCACAATGAAATCTTCCAC GACCGCGCAATCCACACGTACCACCGAGACCGTTTGGCAGAGTGGGGGTG GACAGTGGCCCGCCGCGATGCCGACAGGGAAGCCTTCATCTCGACTGTCT TTTCGCAATCGGACAGGCCGGAGCAGGCGATCGGATTCAAGCTCTTCCCC GAGCACGTATACCGCGACCCGGAGACCATGGCCTCCTTGCTCAGCGACCC CGCCGTCAAGAAGATTGTGCTTCGCCGCGGAAACGCTGTGGCTGCCTACG TTTCCCAGCGCCGCGCGCTGTTGACGGGCCACTTTCTGCGGGTCAAACAG CCCAGCCAGGTCTCCGTTCACATCGACCCTAACGAGCTGCAGCGCCACCT CACCAACTACGAGGCATGCTACGCGACCTACTCCAGTCTGCTGGCGGGGC AGGCGTTCCACGAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig83:476125..478788+

>mRNA_P-littoralis_Contig83.110.1 ID=mRNA_P-littoralis_Contig83.110.1|Name=mRNA_P-littoralis_Contig83.110.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2265bp|location=Sequence derived from alignment at P-littoralis_Contig83:476125..478788+ (Pylaiella littoralis U1_48)
ATGACGGGCATTACCGATGCTCTTCACAATGCGAGAGCGGCCGTTGGTTT
GGGAGCAGCTGAATCTCCCGAGAAGACCTGCGCCACGATCCCACGGCCTT
TTCCTGGATGGCAGCAGCGACTTGCTCTTGCGCCACGAGTGGAATCGTCA
GCTTCTGCCTTGAGCCAGGGATACAAAATGATCACCGCTCTTAGGGCTGC
CGCATGTCTTTGGGGGCTCCTGCTGCCCGTCACCTCCTTCGGCGCCGTTG
GACAGGACAAGGACAACGGTGGGTGCATAAACATGCTCACAAGCTTTAAA
GACTCACTCCTGAGCACCACCACTGTAGATGAACGCAGCGACATTTCCCT
CTGCATCGCTATCGACCAAGGCGACCCCATCTATACCGAAGGCAAGGTGC
GCGGATGCTTCAGCGGGTGTGGCCTCGCAGGCGTAGCCGTAATAGTTCTC
CACCCCGGGTATTTCGGCAACGTTTGCACCATCTGGAACCTTCTTGCAGC
CCACGCCGTCACAGAATTCAAGGTCGACTTCCTGGTCCTCCTGGGTGATG
ATGTGGTGCTACAAACCGCAGGATGGAAGGGCGAGATCGAGACGGCCATG
CGCGAAACATCTGTGGGTGCCGGGCTGCCCGAAGGGATGGCTTGTGTGGC
TTTTCGCGACCTCACTATGCCTGCATTTCCCTGCTTCCCGGTCATCCATC
GCCGTCACGTTGAGATCTTCGGCTCGGTTTTGCCGCCTGAGTTCATCAAC
CAGGGTGGAGATCCCTTCCTCTTCGAGCTGTACCGCCGCTGGGGCGCTTC
TACCTTCGCGGACACCGCTGCGCTGAAGAACCTCATGGGCGGCAAAGACT
CGGCCCGGTACCCGAAGTTTGGTGTCCGCTGGCAATCCGAGATTCTCACA
AGAGAGCTCGAACGCTTCTCACGCCTGGCGCAACCGACGGGAGCTCGCTG
CAAGTGCTTGGGCGTGGTAGTGCCCACGCACAGGTGCGACGTTTCCATGC
TGCAGGACATCCCGCCATGGGGCGTCACGGCCAATCTGTGTGTGAGCGGG
CGCTCAGGGGACATCTGGTTCAACCAAGCCTACCCCAAGACCGGAGGTGG
TGAAGATGTTGACTTCTGCCTAAGGATTAGGCAGCGTTTTGGACCCGACG
CTATCGTGGCGGTGCCTGGAGCTGTGGCCACGCACCCCTACTGGAACAAC
CCTATCCGCCAGATGTGGGGCTGGGCTCGTGGGGACACGCTCTGTCTCAG
TTTTCACCCGCACTCCACCTTCTATCGCGTCTGGGACTGGGCGGAGACAA
CGATGCTGATATGGGTGGTCGGCCTTGTGTGGTTCAATGTCTGGAAATGC
CTTGTGGCATCCGGCATTGTCTGGGCTGTGGAATACCTCGAGGGACTTGC
CCACGTGTACCCAGGGACCACTGGGGTCACGCCCTGGGCTGCGGTGCTTC
TTGCGCCCTTGCCAAGAATGGTGCAGGATGCCGCTCGTCTCTTGACCAAG
CTGGGACGGCTCAACCTTTACCAGCTCCTCCTGAGCTTTGACTGGATGGA
TGGGACAGACGGGCACGCTTGGCGTAAGGCTTCAAGGGCACTCCACGCCA
CCAAGTTCGCTATGAACGTTATCATTATTCTTGGCACTGCACTGGGATAC
GGCATGTATTGCGTACTCTTGGGTCTGGCAGTTCTGGCGGTGTACTGGAA
CTGGCAGACCCGTCGTGTCAAGGGCAAGTCAGTCGGCCAGAGCGGCCCGG
CTCGGTTCGTCGTGCTGGCCTGGCAGCGCACCGGAAGCAACCTCCTTTGC
GGCCTGCTGCACAATCACTCTGGCGTGTTCATGCACAATGAAATCTTCCA
CGACCGCGCAATCCACACGTACCACCGAGACCGTTTGGCAGAGTGGGGGT
GGACAGTGGCCCGCCGCGATGCCGACAGGGAAGCCTTCATCTCGACTGTC
TTTTCGCAATCGGACAGGCCGGAGCAGGCGATCGGATTCAAGCTCTTCCC
CGAGCACGTATACCGCGACCCGGAGACCATGGCCTCCTTGCTCAGCGACC
CCGCCGTCAAGAAGATTGTGCTTCGCCGCGGAAACGCTGTGGCTGCCTAC
GTTTCCCAGCGCCGCGCGCTGTTGACGGGCCACTTTCTGCGGGTCAAACA
GCCCAGCCAGGTCTCCGTTCACATCGACCCTAACGAGCTGCAGCGCCACC
TCACCAACTACGAGGCATGCTACGCGACCTACTCCAGTCTGCTGGCGGGG
CAGGCGTTCCACGAG
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