mRNA_P-littoralis_Contig83.101.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig83.101.1 vs. uniprot
Match: D8LK15_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK15_ECTSI) HSP 1 Score: 376 bits (965), Expect = 3.920e-121 Identity = 249/454 (54.85%), Postives = 278/454 (61.23%), Query Frame = 3
Query: 132 KKW--HYQQKRTRDDRQEXXXXXXXXXXXXXXXXXXXXEQRPKKPRRAAVIGLGNVKGHQAVVGTCDIRNDRQATAELVDLLNSVADDIYPQAAEKEDEAGNQEGETAAAGVSPSVTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEREKSVEEMIRQEADELRTGQAKTHRFKSVNTSVKGVVMVCVMDPKVDILRLVDALYAEIRTTKMRRSRFLERVTPLQVTAYSELEAFKEAAEPIISGALPPVADGVPALPVVAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAATGCAGDEVGVSGEIEEAVAAVATDSSPKGSGDVIPSGAKTEARV--------AVDSGNENKTTSDKRWKFRVDIRRRNSGLKRLDLINAVAGSVGEGHSVSMSSPEVTIAVEAVKSVVGASVLFNYALNHEYSISRLQDAVCGAILDS 1463
KKW HYQ KR R+ Q+ ++ PKKPRR A I LGNVKGHQAVVGTCD+R+DRQATAELVD+LNSVADD+YP+ +G+ AAA + + + XXXXXXX AAE SVEEM++QEAD LR+G K HRFKSVNTSVKGVVMVCV+DPKVDILRLVD LY EIRTTKMRRSRFLERVTPLQVTAYSEL+A KEA PI+S ALPPVA+ VP LP + A +GD+V + E EE A S+P G+GD V GNE KT DKRWKFR DIRRRNSGLKRLDLINA GSVG GHSV+M+SPEVTI VEAVKSVVG SVLFNYA NHEYSISRLQDAVCGAILDS
Sbjct: 5 KKWTGHYQAKRPREGEQDGNGGSG--------------DEGPKKPRRTAAINLGNVKGHQAVVGTCDVRHDRQATAELVDMLNSVADDMYPET----------DGDDAAAEDAATASPVAPTPSAEGKPGNGDSDGARAXXXXXXXPAGGAAE--MSVEEMVKQEADALRSGSDKVHRFKSVNTSVKGVVMVCVVDPKVDILRLVDTLYDEIRTTKMRRSRFLERVTPLQVTAYSELDAIKEAVGPIVSKALPPVAEEVPPLPTAVRASGAKATGPAAVKTEKGTP------------------APKDSSGDKVKAA-ETEEKEGEGAAASAPNGTGDXXXXXXXXXXXXXXXXXEGDVVSDGNEKKTC-DKRWKFRADIRRRNSGLKRLDLINAAVGSVGVGHSVNMTSPEVTIVVEAVKSVVGVSVLFNYARNHEYSISRLQDAVCGAILDS 412
BLAST of mRNA_P-littoralis_Contig83.101.1 vs. uniprot
Match: A0A5D6XRX3_9STRA (THUMP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRX3_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.060e-9 Identity = 57/215 (26.51%), Postives = 98/215 (45.58%), Query Frame = 3
Query: 255 KPRRAAVIGLGNVKGHQAVVGTCDIRNDRQATAELVDLLNSVADDIYPQAAEKEDEAGNQE----GETAAAGVSPSVTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEREKSVEEMIRQEADELRTG--QAKTHRFKSVNTSVKGVVMVCVMDPKVDILRLVDALYAEIRTTKMRRSRFLERVTPLQVTAYSELEAFKEAAEPIISGAL 881
K + A+ KG V+ TCD +RQ+ + +D+LN AD +P A E AG+ E G TAAA + +V++ ++ E + LR + KT RF +++T VKGV+++ ++DP++ LV ++AE+ +K SRF+ R+ PL+ ++ + +E A P+I+ L
Sbjct: 19 KRYKGALAFAAAAKGSGGVLVTCDKTKERQSVRDTLDVLNDAADKFFP-ATEMARLAGDAEETDSGATAAASSAAD-----------------------------------------TVQKKLQDEINALRADAKKRKTGRFTALDTGVKGVILIQILDPEISARALVLRIFAEVEASKEFASRFISRLIPLEKIGHAARDDIRELARPMIAAQL 191
BLAST of mRNA_P-littoralis_Contig83.101.1 vs. uniprot
Match: A0A6G0WID4_9STRA (THUMP domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WID4_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.150e-8 Identity = 47/192 (24.48%), Postives = 87/192 (45.31%), Query Frame = 3
Query: 294 KGHQAVVGTCDIRNDRQATAELVDLLNSVADDIYPQAAEKEDEAGNQEGETAAAGVSPSVTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEREKSVEEMIRQEADELRTGQAKTHRFKSVNTSVKGVVMVCVMDPKVDILRLVDALYAEIRTTKMRRSRFLERVTPLQVTAYSELEAFKEAAEPII 869
KG A++ TCD +RQ +++++LN VA+ +YP E E + +T+A + + ++++A E TG RF ++++ VKG+++V +D +D+ R+VD ++ ++ TK SRF++R+ PL+ Y +E E A+P I
Sbjct: 30 KGSSALLVTCDRIKERQVVKDILNILNDVAEVMYPGTKEDTAEKSESKAKTSAELLQDEIAG-------------------------------------------LKKDAKEGSTG-----RFAALDSGVKGIILVQFLDESMDVKRIVDHIFQQVVDTKEFASRFIQRMIPLEKLCYPSVEDIAECAKPFI 173
BLAST of mRNA_P-littoralis_Contig83.101.1 vs. uniprot
Match: K3X3L8_GLOUD (THUMP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3L8_GLOUD) HSP 1 Score: 64.7 bits (156), Expect = 1.850e-7 Identity = 47/215 (21.86%), Postives = 93/215 (43.26%), Query Frame = 3
Query: 243 QRPKKPRRAAVIGLGNVKGHQAVVGTCDIRNDRQATAELVDLLNSVADDIYPQAAEKEDEAGNQEGETAAAGVSPSVTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEREKSVEEMIRQEADELRTG--QAKTHRFKSVNTSVKGVVMVCVMDPKVDILRLVDALYAEIRTTKMRRSRFLERVTPLQVTAYSELEAFKEAAEPIISGAL 881
Q K + A+ + KG V+ TCD +RQ+ + +++LN AD +P ++ D GN E +V++ ++ E + L++ + KT RF +++T VKGV+++ ++D ++ + L+ ++ E+ TK SRF+ R+ PL+ ++ + E A+P++ L
Sbjct: 19 QDANKRYKGALSSAASAKGSGGVLVTCDKTKERQSVRDALNILNEAADKFFPSTKQEAD-GGNDEXXXXXXXXXXXXXX--------------------------------------TVQQKLQDEINALKSDAKKRKTGRFTALDTGVKGVILIQILDKEISAIALITKIFEEVEATKEFASRFINRMIPLEKLGHAAKDDILELAKPMVEAHL 194
BLAST of mRNA_P-littoralis_Contig83.101.1 vs. uniprot
Match: A0A1V9Z6J2_9STRA (THUMP domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6J2_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.610e-7 Identity = 46/192 (23.96%), Postives = 84/192 (43.75%), Query Frame = 3
Query: 294 KGHQAVVGTCDIRNDRQATAELVDLLNSVADDIYPQAAEKEDEAGNQEGETAAAGVSPSVTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEREKSVEEMIRQEADELRTGQAKTHRFKSVNTSVKGVVMVCVMDPKVDILRLVDALYAEIRTTKMRRSRFLERVTPLQVTAYSELEAFKEAAEPII 869
KG+ ++ TCD +RQ +++++LN A+ YP+ E +E + +T+A EK EE+ + D+ RF +++T VKG++M+ ++D K+ ++ LVD ++ E+ TK SRF++R+ PL+ + +E A P I
Sbjct: 30 KGYAGILVTCDRIKERQVVKDVLNILNEAAEKYYPKYDEDNEEEEEGDSKTSA---------------------------------------------EKLAEEIKGLKKDK--------GRFVALDTGVKGIIMIQIVDRKIPVIALVDRIFEEVVDTKQFSSRFIQRLIPLENLCFPSVEDITTAVTPFI 168
BLAST of mRNA_P-littoralis_Contig83.101.1 vs. uniprot
Match: A0A835Z5R2_9STRA (THUMP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5R2_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 2.370e-6 Identity = 29/76 (38.16%), Postives = 48/76 (63.16%), Query Frame = 3
Query: 1224 KFRVDIRRRNSGLKRLDLINAVAGSVGEGHSVSMSSPEVTIAVEAVKSVVGASVL--FNYALNHEYSISRLQDAVC 1445
K+ V + RRNSG++R +++ G V H+VS+S PE+ I VEA++ ++G SV+ ++++ RLQD VC
Sbjct: 75 KWAVSLTRRNSGMQRQQVVDVFGGLVPNVHTVSLSEPEMVIVVEAMRGIIGVSVMKAATKVACSDFNLRRLQDEVC 150
BLAST of mRNA_P-littoralis_Contig83.101.1 vs. uniprot
Match: A0A7S3M4F1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4F1_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 3.790e-5 Identity = 47/191 (24.61%), Postives = 86/191 (45.03%), Query Frame = 3
Query: 282 LGNVKGHQAVVGTCDIRNDRQATAELVDLLNSVADDI----YPQAAEKEDEAGNQEGETAAAGVSPSVTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEREKSVEEMIRQEADEL----RTGQAKTHRFKSVNTSVKGVVMVCVMDPKVDILRLVDALYAEIRTTKMRRSRFLERVTPLQVTAYS 830
L + +G+ A++GTCD +R++T EL +LL+ + + P +A +EDE +++ +S+E+M+R E ++ RTG T F S+NT +KG+V+V + + + LV +++ +I T K+ SR L R+ PLQ+ ++
Sbjct: 25 LTSCRGYAAIIGTCDAARERESTKELSNLLSQAIERLGLTAAPPSAVEEDEVAE------------------------------------------------SSKGSESIEDMLRNEVMQIKSQKRTG---TQDFVSINTGIKGIVLVKIARRDLCPVMLVKSIFDQISTEKVPCSRHLVRMIPLQILFFA 164
BLAST of mRNA_P-littoralis_Contig83.101.1 vs. uniprot
Match: UPI00189BAD3F (THUMP domain-containing protein 1-like n=1 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI00189BAD3F) HSP 1 Score: 56.6 bits (135), Expect = 7.620e-5 Identity = 33/96 (34.38%), Postives = 56/96 (58.33%), Query Frame = 3
Query: 591 KSVEEMIRQEADELRTGQAKTHRFKSVNTSVKG--VVMVCVMDPKVDILRLVDALYAEIRTTKMRRSRFLERVTPLQVTAYSELEAFKEAAEPIIS 872
KS+E+ I +E +EL+ + K RF+ V T V G V V DP RLV A++ +++ +RSRF++R+ P+Q T + L+ K+ E +++
Sbjct: 72 KSIEDDIAEELNELKESKDKVRRFQKVKTDVAGNFFVTTTVDDPG----RLVTAIFEDLKAKHEQRSRFIQRLLPVQTTCKANLDTMKKTVETVLA 163 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig83.101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig83.101.1 >prot_P-littoralis_Contig83.101.1 ID=prot_P-littoralis_Contig83.101.1|Name=mRNA_P-littoralis_Contig83.101.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=447bp MGKKWHYQQKRTRDDRQEEDGDSNGGGGDGVGGGSGNGEQRPKKPRRAAVback to top mRNA from alignment at P-littoralis_Contig83:428947..431262- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig83.101.1 ID=mRNA_P-littoralis_Contig83.101.1|Name=mRNA_P-littoralis_Contig83.101.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2316bp|location=Sequence derived from alignment at P-littoralis_Contig83:428947..431262- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig83:428947..431262- >mRNA_P-littoralis_Contig83.101.1 ID=mRNA_P-littoralis_Contig83.101.1|Name=mRNA_P-littoralis_Contig83.101.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1341bp|location=Sequence derived from alignment at P-littoralis_Contig83:428947..431262- (Pylaiella littoralis U1_48)back to top |