mRNA_P-littoralis_Contig12.162.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig12.162.1 vs. uniprot
Match: A0A6H5JYS0_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS0_9PHAE) HSP 1 Score: 383 bits (984), Expect = 2.000e-129 Identity = 192/209 (91.87%), Postives = 196/209 (93.78%), Query Frame = 1
Query: 10 TPQGTKTTKAFAEPGQKVVGSMRSNSRENAT-VVATISADGHTWAPTIIF*GQRLQADWFVERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDDHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGCFKKSVTRVLASFYHNSGGLLPLKRDMPGVIANAWKVSFTPEINKSSFAGAGLWPVN 633
TPQGTKTTKAFAE GQKVVGSMRSNSREN T VV TISADGHTWAPTIIF G RLQADWFVERNGPEGARYTCT SSFMQGDVFIAYLKDFHKQ G+RGLLDGKPHILLLD H+SHV VEV RLAMNLKIIL QLPSHTSHITQPLDVVAFG FKKSVTRVLASFYHNSGGLLPLKRDMPGVIA+AWK+SFTPEINKSSFAGAGLWPVN
Sbjct: 148 TPQGTKTTKAFAESGQKVVGSMRSNSRENTTTVVVTISADGHTWAPTIIFKGHRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQFGERGLLDGKPHILLLDGHSSHVRVEVTRLAMNLKIILIQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVN 356
BLAST of mRNA_P-littoralis_Contig12.162.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE) HSP 1 Score: 359 bits (922), Expect = 3.180e-121 Identity = 178/192 (92.71%), Postives = 183/192 (95.31%), Query Frame = 1
Query: 58 KVVGSMRSNSRENATVVATISADGHTWAPTIIF*GQRLQADWFVERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDDHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGCFKKSVTRVLASFYHNSGGLLPLKRDMPGVIANAWKVSFTPEINKSSFAGAGLWPVN 633
KVVGSMRSNSREN TVVATISADGHTWAPTIIF GQRLQADWFVERNG EGA+YTCT SFMQGD+FIAYLKDFHKQL DRGLLDGKPHILLLD HASHVSVEVI+LAMNLKIILFQLPSHTSHITQPLDVVAFG FKKSVTRVLASFY NSGGLLPLKRDMPGVIA+AWK+SFTPEINKSSFAGAGLWPVN
Sbjct: 203 KVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGLEGAKYTCTDYSFMQGDLFIAYLKDFHKQLCDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVN 394
BLAST of mRNA_P-littoralis_Contig12.162.1 vs. uniprot
Match: A0A6H5KNQ5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ5_9PHAE) HSP 1 Score: 351 bits (900), Expect = 8.050e-118 Identity = 185/251 (73.71%), Postives = 193/251 (76.89%), Query Frame = 1
Query: 25 KTTKAFAEPGQKVVGSMRSNSRENATVVATISADGHTWAPTIIF*GQRLQADWFVERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDDHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGCFKKSVTRVLASFYHNSGGL------------------------------------------------LPLKRDMPGVIANAWKVSFTPEINKSSFAGAGLWPVN 633
+T +AFAE GQKVVGSMRSNSREN TVVATISADGHTWAPTIIF GQRLQADWFVERNGPEGARYTCT S F Q +VFIAYLKDFHKQLGDRGLLDGKPHILLLD HASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFG FKKSVTRVL+SFYHNSGGL LPL+RDMPGVIA+AWK+SFTPEIN+SSFAGAGLWPVN
Sbjct: 146 RTRQAFAESGQKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSFFTQENVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLSSFYHNSGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPLERDMPGVIADAWKLSFTPEINQSSFAGAGLWPVN 396
BLAST of mRNA_P-littoralis_Contig12.162.1 vs. uniprot
Match: A0A6H5KN20_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN20_9PHAE) HSP 1 Score: 345 bits (884), Expect = 6.540e-115 Identity = 173/188 (92.02%), Postives = 178/188 (94.68%), Query Frame = 1
Query: 7 TTPQGTKTTKAFAEPGQKVVGSMRSNSRENATVVATISADGHTWAPTIIF*GQRLQADWFVERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDDHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGCFKKSVTRVLASFYHNSGGLLPLKRDMPGVIANAWK 570
TTPQGTKTTKAFAE GQKVVG+MRSNSREN TVVATIS DGHTWAPTIIF GQRLQADWFVERNGPEGARYTCT SSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLD HASHVSV+V RLAMNL+IILFQLPSHTSHITQPL+VVAFG FKKSVTRVLASFYHNSGGLLPLKRDMP VIA+A K
Sbjct: 227 TTPQGTKTTKAFAESGQKVVGAMRSNSRENTTVVATISVDGHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVQVFRLAMNLRIILFQLPSHTSHITQPLNVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPSVIADASK 414
BLAST of mRNA_P-littoralis_Contig12.162.1 vs. uniprot
Match: A0A6H5JIF7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIF7_9PHAE) HSP 1 Score: 338 bits (868), Expect = 1.230e-113 Identity = 171/187 (91.44%), Postives = 172/187 (91.98%), Query Frame = 1
Query: 73 MRSNSRENATVVATISADGHTWAPTIIF*GQRLQADWFVERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDDHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGCFKKSVTRVLASFYHNSGGLLPLKRDMPGVIANAWKVSFTPEINKSSFAGAGLWPVN 633
MRSNS EN TVVATISADGHTWAPTIIF GQRLQAD F ERNGPEGARYTCTGSSFMQGDV IAYLKDFHKQLGDRGLLDGKPH LLLD ASHVSVEVIRLAMNLK ILFQLPSHTSHITQPLDVVAFG FKKSVTRVLA FYHNSGGLLPLK DMPGVIA+AWK SFTPEINKSSFA AGLWPVN
Sbjct: 1 MRSNSLENTTVVATISADGHTWAPTIIFKGQRLQADGFEERNGPEGARYTCTGSSFMQGDVLIAYLKDFHKQLGDRGLLDGKPHKLLLDGLASHVSVEVIRLAMNLKTILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLAFFYHNSGGLLPLKCDMPGVIADAWKSSFTPEINKSSFAEAGLWPVN 187
BLAST of mRNA_P-littoralis_Contig12.162.1 vs. uniprot
Match: A0A6H5KHG4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG4_9PHAE) HSP 1 Score: 331 bits (848), Expect = 1.510e-109 Identity = 166/209 (79.43%), Postives = 179/209 (85.65%), Query Frame = 1
Query: 4 GTTPQGTKTTKAFAEPGQKVVGSMRSNSRENATVVATISADGHTWAPTIIF*GQRLQADWFVERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDDHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGCFKKSVTRVLASFYHNSGGLLPLKRDMPGVIANAWKVSFTPEINKSSFAGAGLWPV 630
GTTPQGTKT KAFAE GQKVV SMRSNSRENATVV TIS +G TWAPTIIF GQRLQ DWF ERNGP+ ARYTCT SSFMQGDVFI YLKDF+KQL DRG+LDGKPHIL+L HAS VS EVI+LAM L IILFQLPSHTSHITQPLDVVAFG FKK VT+VL +YH +GG LPLKRD+P VIA AW+ SFTPE NK+SF GAGLWP+
Sbjct: 109 GTTPQGTKTMKAFAEVGQKVVESMRSNSRENATVVTTISTNGVTWAPTIIFKGQRLQLDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFYKQLDDRGVLDGKPHILVLGGHASLVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGSLPLKRDVPSVIAAAWQRSFTPERNKASFGGAGLWPL 317
BLAST of mRNA_P-littoralis_Contig12.162.1 vs. uniprot
Match: A0A6H5L2E0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E0_9PHAE) HSP 1 Score: 331 bits (848), Expect = 2.170e-109 Identity = 166/185 (89.73%), Postives = 169/185 (91.35%), Query Frame = 1
Query: 85 SRENAT--VVATISADGHTWAPTIIF*GQRLQADWFVERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDDHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGCFKKSVTRVLASFYHNSGGLLPLKRDMPGVIANAWKVSFTPEINKSSFAGAGLWPVN 633
SRE A VVA ISAD HT APTIIF GQRLQ DWF ERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLD HASHVSVEV +LAMNLKII FQLPSHTSHITQPLDVVAFG FKKSVTRVLASFYHNSGG LPLKRDMPGVIA+AWK+SF PEINKSSFAGAGLWPVN
Sbjct: 153 SREPAATNVVANISADDHTLAPTIIFKGQRLQTDWFAERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVSKLAMNLKIISFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGSLPLKRDMPGVIADAWKLSFAPEINKSSFAGAGLWPVN 337
BLAST of mRNA_P-littoralis_Contig12.162.1 vs. uniprot
Match: A0A6H5KGL1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL1_9PHAE) HSP 1 Score: 326 bits (835), Expect = 6.960e-109 Identity = 160/200 (80.00%), Postives = 174/200 (87.00%), Query Frame = 1
Query: 34 KAFAEPGQKVVGSMRSNSRENATVVATISADGHTWAPTIIF*GQRLQADWFVERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDDHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGCFKKSVTRVLASFYHNSGGLLPLKRDMPGVIANAWKVSFTPEINKSSFAGAGLWPVN 633
KAFAE GQKVV SMRSNSREN TVV TISA+G TWAPTIIF GQRLQ DWF ERNGP+ ARYTCT SSFMQGDVFI YLKDFHKQL DRG+LDGKPHIL+LD HASHVS E I+LAM+L IILF+LPSHTSHITQPLDVVAFG FKK VT+VL +YH +GGLLPLKRD+PGVIA AW+ S TPE NK+SF GAGLWPV+
Sbjct: 2 KAFAEAGQKVVESMRSNSRENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIMYLKDFHKQLDDRGVLDGKPHILVLDGHASHVSYEFIKLAMDLNIILFKLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQNSLTPERNKASFGGAGLWPVD 201
BLAST of mRNA_P-littoralis_Contig12.162.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE) HSP 1 Score: 327 bits (837), Expect = 2.960e-108 Identity = 165/210 (78.57%), Postives = 177/210 (84.29%), Query Frame = 1
Query: 4 GTTPQGTKTTKAFAEPGQKVVGSMRSNSRENATVVATISADGHTWAPTIIF*GQRLQADWFVERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDDHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGCFKKSVTRVLASFYHNSGGLLPLKRDMPGVIANAWKVSFTPEINKSSFAGAGLWPVN 633
G TPQGTKT KAFAE GQKVV SMRSNS EN TVV TISA+G TWAPTIIF GQRLQ DWF ERNGP+ ARYTCT SSFMQGDVFI YLKDFHKQL DRG+LDGKPH L+LD HASHVS EVI+LAM L IILFQLPSHTSHITQPLDVVAFG FKK VT+VL +YH +GGLLPLKRD+PGVIA AW+ S T E N +SF GAGL PV+
Sbjct: 166 GPTPQGTKTMKAFAEAGQKVVESMRSNSLENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFHKQLDDRGVLDGKPHTLVLDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQRSLTLERNNASFGGAGLRPVD 375
BLAST of mRNA_P-littoralis_Contig12.162.1 vs. uniprot
Match: A0A6H5J9B8_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B8_9PHAE) HSP 1 Score: 320 bits (820), Expect = 5.830e-107 Identity = 157/200 (78.50%), Postives = 170/200 (85.00%), Query Frame = 1
Query: 34 KAFAEPGQKVVGSMRSNSRENATVVATISADGHTWAPTIIF*GQRLQADWFVERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDDHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGCFKKSVTRVLASFYHNSGGLLPLKRDMPGVIANAWKVSFTPEINKSSFAGAGLWPVN 633
K FAE GQ VV SMRSNSREN TVV TISA+G TWAPTIIF GQRLQ DWF ERNGP+ ARYTCT SSFMQGDVFI Y KDFHKQL DRG+LDGKPH L+LD+HAS+VS EVI+LAM L IILFQLPSHTSHITQPLDVVAFG FKK VT VL +YH +GGLLPLKRD+PGVIA AW+ SFTPE NK+SF G GLWPV+
Sbjct: 2 KTFAEAGQTVVESMRSNSRENTTVVTTISANGATWAPTIIFRGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYFKDFHKQLDDRGVLDGKPHTLVLDEHASYVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTTVLQDYYHANGGLLPLKRDVPGVIAAAWQRSFTPERNKASFGGVGLWPVD 201 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.162.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig12.162.1 >prot_P-littoralis_Contig12.162.1 ID=prot_P-littoralis_Contig12.162.1|Name=mRNA_P-littoralis_Contig12.162.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=131bp MQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDDHASHVSVEVIRLAMNLback to top mRNA from alignment at P-littoralis_Contig12:688845..689477+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig12.162.1 ID=mRNA_P-littoralis_Contig12.162.1|Name=mRNA_P-littoralis_Contig12.162.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=633bp|location=Sequence derived from alignment at P-littoralis_Contig12:688845..689477+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig12:688845..689477+ >mRNA_P-littoralis_Contig12.162.1 ID=mRNA_P-littoralis_Contig12.162.1|Name=mRNA_P-littoralis_Contig12.162.1|organism=Pylaiella littoralis U1_48|type=CDS|length=393bp|location=Sequence derived from alignment at P-littoralis_Contig12:688845..689477+ (Pylaiella littoralis U1_48)back to top |